Multiple sequence alignment - TraesCS4A01G119400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G119400 chr4A 100.000 2758 0 0 1 2758 147446980 147444223 0.000000e+00 5094.0
1 TraesCS4A01G119400 chr4B 91.871 1181 57 15 616 1780 404556924 404558081 0.000000e+00 1613.0
2 TraesCS4A01G119400 chr4B 86.458 96 11 2 2224 2318 404558721 404558815 1.350000e-18 104.0
3 TraesCS4A01G119400 chr4B 90.000 80 8 0 2640 2719 581192760 581192839 1.350000e-18 104.0
4 TraesCS4A01G119400 chr4B 91.071 56 4 1 1798 1853 106975910 106975856 1.060000e-09 75.0
5 TraesCS4A01G119400 chr4D 91.856 835 29 11 684 1512 324009211 324010012 0.000000e+00 1129.0
6 TraesCS4A01G119400 chr4D 83.433 833 82 23 1577 2370 324009996 324010811 0.000000e+00 723.0
7 TraesCS4A01G119400 chr4D 83.193 714 61 22 1 685 324001997 324002680 1.410000e-167 599.0
8 TraesCS4A01G119400 chr4D 94.286 70 4 0 2536 2605 481337798 481337729 1.040000e-19 108.0
9 TraesCS4A01G119400 chr1D 91.228 114 10 0 2606 2719 323930233 323930120 3.680000e-34 156.0
10 TraesCS4A01G119400 chr1D 88.710 62 4 3 1798 1857 97862690 97862750 3.810000e-09 73.1
11 TraesCS4A01G119400 chr3D 88.596 114 12 1 2606 2719 4630097 4629985 1.330000e-28 137.0
12 TraesCS4A01G119400 chr3D 94.366 71 4 0 2535 2605 6303749 6303819 2.900000e-20 110.0
13 TraesCS4A01G119400 chr3D 92.208 77 6 0 2643 2719 269610277 269610201 2.900000e-20 110.0
14 TraesCS4A01G119400 chr3D 94.286 70 4 0 2536 2605 441645595 441645664 1.040000e-19 108.0
15 TraesCS4A01G119400 chr3D 80.734 109 19 2 1 107 514678096 514677988 1.760000e-12 84.2
16 TraesCS4A01G119400 chr3D 100.000 29 0 0 2190 2218 461558002 461558030 1.000000e-03 54.7
17 TraesCS4A01G119400 chr3A 88.991 109 12 0 2606 2714 730210194 730210086 4.790000e-28 135.0
18 TraesCS4A01G119400 chr3A 92.857 70 5 0 2536 2605 171789843 171789774 4.860000e-18 102.0
19 TraesCS4A01G119400 chr3A 91.071 56 4 1 1798 1853 556668857 556668803 1.060000e-09 75.0
20 TraesCS4A01G119400 chr7D 89.362 94 10 0 2626 2719 423346040 423345947 4.830000e-23 119.0
21 TraesCS4A01G119400 chr7D 96.610 59 2 0 2536 2594 567513951 567513893 6.290000e-17 99.0
22 TraesCS4A01G119400 chr2B 93.506 77 4 1 2643 2719 178860367 178860292 2.240000e-21 113.0
23 TraesCS4A01G119400 chr2B 77.500 160 26 9 1 152 591513091 591513248 1.360000e-13 87.9
24 TraesCS4A01G119400 chr5A 91.250 80 7 0 2640 2719 361449659 361449738 2.900000e-20 110.0
25 TraesCS4A01G119400 chr5A 92.857 70 5 0 2536 2605 595103686 595103617 4.860000e-18 102.0
26 TraesCS4A01G119400 chr3B 89.412 85 9 0 2634 2718 31684535 31684451 1.040000e-19 108.0
27 TraesCS4A01G119400 chr3B 81.538 130 18 6 1 126 58863800 58863673 4.860000e-18 102.0
28 TraesCS4A01G119400 chr1A 94.286 70 4 0 2536 2605 580574036 580573967 1.040000e-19 108.0
29 TraesCS4A01G119400 chr1A 91.071 56 4 1 1814 1868 66895576 66895521 1.060000e-09 75.0
30 TraesCS4A01G119400 chr1A 90.909 55 4 1 1798 1852 531230035 531229982 3.810000e-09 73.1
31 TraesCS4A01G119400 chr7B 91.781 73 6 0 2532 2604 595344443 595344515 4.860000e-18 102.0
32 TraesCS4A01G119400 chr7B 91.071 56 4 1 1798 1853 619400805 619400751 1.060000e-09 75.0
33 TraesCS4A01G119400 chr6B 92.857 70 5 0 2536 2605 253447290 253447359 4.860000e-18 102.0
34 TraesCS4A01G119400 chr6B 87.097 62 4 3 1801 1862 588833475 588833418 1.770000e-07 67.6
35 TraesCS4A01G119400 chr2D 88.710 62 6 1 1798 1859 560513505 560513445 1.060000e-09 75.0
36 TraesCS4A01G119400 chr5D 86.154 65 5 4 1798 1861 382868464 382868403 1.770000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G119400 chr4A 147444223 147446980 2757 True 5094.0 5094 100.0000 1 2758 1 chr4A.!!$R1 2757
1 TraesCS4A01G119400 chr4B 404556924 404558815 1891 False 858.5 1613 89.1645 616 2318 2 chr4B.!!$F2 1702
2 TraesCS4A01G119400 chr4D 324009211 324010811 1600 False 926.0 1129 87.6445 684 2370 2 chr4D.!!$F2 1686
3 TraesCS4A01G119400 chr4D 324001997 324002680 683 False 599.0 599 83.1930 1 685 1 chr4D.!!$F1 684

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
859 895 0.037605 AAAGAACCGCGGATTCGAGT 60.038 50.0 35.9 17.65 39.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2400 2849 0.670546 CTACAACCCACGCTCCACTG 60.671 60.0 0.0 0.0 0.0 3.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 2.031157 CCGTGTGTCCAAATCTTGAACC 60.031 50.000 0.00 0.00 0.00 3.62
28 29 7.206687 GTGTGTCCAAATCTTGAACCATTTTA 58.793 34.615 0.00 0.00 0.00 1.52
31 32 7.170828 GTGTCCAAATCTTGAACCATTTTAACC 59.829 37.037 0.00 0.00 0.00 2.85
35 36 9.065798 CCAAATCTTGAACCATTTTAACCATTT 57.934 29.630 0.00 0.00 0.00 2.32
45 46 6.210584 ACCATTTTAACCATTTGATTCCTCGT 59.789 34.615 0.00 0.00 0.00 4.18
46 47 6.531240 CCATTTTAACCATTTGATTCCTCGTG 59.469 38.462 0.00 0.00 0.00 4.35
124 127 1.698506 AATGGACGGAAAAGCCACAA 58.301 45.000 0.00 0.00 35.94 3.33
127 130 1.281656 GACGGAAAAGCCACAACGG 59.718 57.895 0.00 0.00 35.94 4.44
130 133 1.448922 CGGAAAAGCCACAACGGGAA 61.449 55.000 0.00 0.00 35.94 3.97
157 160 5.529581 TTTTTCCTTTCCGAAAGCAGATT 57.470 34.783 14.46 0.00 37.18 2.40
158 161 4.766404 TTTCCTTTCCGAAAGCAGATTC 57.234 40.909 14.46 0.00 37.18 2.52
159 162 2.711542 TCCTTTCCGAAAGCAGATTCC 58.288 47.619 14.46 0.00 37.18 3.01
160 163 2.039746 TCCTTTCCGAAAGCAGATTCCA 59.960 45.455 14.46 0.00 37.18 3.53
169 172 0.694771 AGCAGATTCCAAGAGGCACA 59.305 50.000 0.00 0.00 33.74 4.57
187 190 0.894141 CAGCCATATCTCTCCCGGAG 59.106 60.000 8.30 8.30 43.12 4.63
242 245 4.443266 ACGGCCTCTCGCAGAAGC 62.443 66.667 0.00 0.00 40.31 3.86
245 248 1.672356 GGCCTCTCGCAGAAGCAAA 60.672 57.895 0.00 0.00 42.27 3.68
317 341 6.466097 GCAAAGAAAGATCGATAAAAACCGAG 59.534 38.462 0.00 0.00 38.25 4.63
348 372 9.935241 AAAAACCATTTAAAAAGCCAAAAACAT 57.065 22.222 0.00 0.00 0.00 2.71
353 377 5.491635 TTAAAAAGCCAAAAACATGTGCC 57.508 34.783 0.00 0.00 0.00 5.01
420 444 2.081212 CGTGACGACGGTTGAGAGC 61.081 63.158 0.00 0.00 42.18 4.09
438 462 1.140161 CATGGCGCCACCTCAAATG 59.860 57.895 35.50 20.98 40.22 2.32
443 467 1.002134 CGCCACCTCAAATGACCCT 60.002 57.895 0.00 0.00 0.00 4.34
522 546 4.147306 CGATTAGTTGCTCTTGCGAGATAC 59.853 45.833 3.51 3.72 43.34 2.24
523 547 4.720649 TTAGTTGCTCTTGCGAGATACT 57.279 40.909 3.51 10.71 43.34 2.12
549 573 1.743623 CGCAACATAGCCCGTTCCA 60.744 57.895 0.00 0.00 0.00 3.53
551 575 0.451783 GCAACATAGCCCGTTCCAAG 59.548 55.000 0.00 0.00 0.00 3.61
566 590 2.457598 TCCAAGCGAGTCCTAGAACAT 58.542 47.619 0.00 0.00 0.00 2.71
577 601 6.183360 CGAGTCCTAGAACATACACACACATA 60.183 42.308 0.00 0.00 0.00 2.29
588 617 2.126228 ACACATACACGCGTCCCG 60.126 61.111 9.86 0.00 44.21 5.14
607 636 0.521735 GTGTCATCCGAAAACCAGGC 59.478 55.000 0.00 0.00 0.00 4.85
608 637 0.109532 TGTCATCCGAAAACCAGGCA 59.890 50.000 0.00 0.00 0.00 4.75
609 638 0.521735 GTCATCCGAAAACCAGGCAC 59.478 55.000 0.00 0.00 0.00 5.01
610 639 0.109532 TCATCCGAAAACCAGGCACA 59.890 50.000 0.00 0.00 0.00 4.57
611 640 0.240945 CATCCGAAAACCAGGCACAC 59.759 55.000 0.00 0.00 0.00 3.82
612 641 1.234615 ATCCGAAAACCAGGCACACG 61.235 55.000 0.00 0.00 0.00 4.49
613 642 2.637025 CGAAAACCAGGCACACGG 59.363 61.111 0.00 0.00 0.00 4.94
686 715 2.928361 CGATGTGCCGCCGATTAC 59.072 61.111 0.00 0.00 0.00 1.89
687 716 2.594962 CGATGTGCCGCCGATTACC 61.595 63.158 0.00 0.00 0.00 2.85
739 775 2.630232 AGAATCCAGATCCCTGATCCC 58.370 52.381 0.59 0.00 43.02 3.85
753 789 4.413520 CCCTGATCCCTATCCAGAAAAAGA 59.586 45.833 0.00 0.00 0.00 2.52
756 792 3.906720 TCCCTATCCAGAAAAAGACGG 57.093 47.619 0.00 0.00 0.00 4.79
762 798 1.228429 CAGAAAAAGACGGGGCCCA 60.228 57.895 26.86 0.00 0.00 5.36
821 857 2.131067 CCTGCCAAAAACCACGGGT 61.131 57.895 0.00 0.00 37.65 5.28
831 867 3.390521 CCACGGGTAGCAGCTCCA 61.391 66.667 0.00 0.00 0.00 3.86
845 881 1.494721 AGCTCCAGTTCCACCAAAGAA 59.505 47.619 0.00 0.00 0.00 2.52
853 889 1.674322 CCACCAAAGAACCGCGGAT 60.674 57.895 35.90 23.25 0.00 4.18
855 891 0.168128 CACCAAAGAACCGCGGATTC 59.832 55.000 35.90 28.50 0.00 2.52
859 895 0.037605 AAAGAACCGCGGATTCGAGT 60.038 50.000 35.90 17.65 39.00 4.18
900 936 4.270392 CGGTCACCGTGCAACATA 57.730 55.556 8.54 0.00 42.73 2.29
901 937 1.785321 CGGTCACCGTGCAACATAC 59.215 57.895 8.54 0.00 42.73 2.39
902 938 0.669318 CGGTCACCGTGCAACATACT 60.669 55.000 8.54 0.00 42.73 2.12
903 939 1.076332 GGTCACCGTGCAACATACTC 58.924 55.000 0.00 0.00 35.74 2.59
904 940 1.076332 GTCACCGTGCAACATACTCC 58.924 55.000 0.00 0.00 35.74 3.85
905 941 0.973632 TCACCGTGCAACATACTCCT 59.026 50.000 0.00 0.00 35.74 3.69
942 978 2.813061 GCACACAGCACTTCAACAAAT 58.187 42.857 0.00 0.00 44.79 2.32
944 980 3.489738 GCACACAGCACTTCAACAAATCT 60.490 43.478 0.00 0.00 44.79 2.40
945 981 4.285292 CACACAGCACTTCAACAAATCTC 58.715 43.478 0.00 0.00 0.00 2.75
970 1006 3.576982 TCAAGAAAGTGTACCCATCGACT 59.423 43.478 0.00 0.00 0.00 4.18
982 1018 2.868583 CCCATCGACTCACAAAGCATAG 59.131 50.000 0.00 0.00 0.00 2.23
988 1024 3.670895 CGACTCACAAAGCATAGACGAGT 60.671 47.826 0.00 0.00 35.07 4.18
990 1026 2.337583 TCACAAAGCATAGACGAGTGC 58.662 47.619 0.00 0.00 41.57 4.40
1093 1129 3.423154 GCCTCACCAACTTCGCCG 61.423 66.667 0.00 0.00 0.00 6.46
1468 1513 3.991536 GACAAGCTCGGAGCCGACC 62.992 68.421 25.49 9.92 43.77 4.79
1512 1557 4.123506 GCTATGGCTTTCTCAAGAGGTAC 58.876 47.826 0.00 0.00 35.22 3.34
1513 1558 2.743636 TGGCTTTCTCAAGAGGTACG 57.256 50.000 0.00 0.00 30.57 3.67
1514 1559 1.968493 TGGCTTTCTCAAGAGGTACGT 59.032 47.619 0.00 0.00 30.57 3.57
1515 1560 3.159472 TGGCTTTCTCAAGAGGTACGTA 58.841 45.455 0.00 0.00 30.57 3.57
1537 1582 8.790718 ACGTAATTCTTTCTGACTTCTGTACTA 58.209 33.333 0.00 0.00 0.00 1.82
1558 1603 3.046087 CACACGCTGCACTCCAGG 61.046 66.667 0.00 0.00 42.03 4.45
1584 1629 1.522580 GAGACCAGCGGGATTGCTC 60.523 63.158 10.86 6.95 45.23 4.26
1600 1645 7.420800 GGGATTGCTCAACTGATAATTACTTG 58.579 38.462 0.00 0.00 0.00 3.16
1631 1677 3.906720 AATATGTACGCCACTTCAGGT 57.093 42.857 0.00 0.00 0.00 4.00
1633 1679 2.094762 ATGTACGCCACTTCAGGTTC 57.905 50.000 0.00 0.00 0.00 3.62
1659 1713 0.596577 GAGTAGTGCTCGTGTGACCA 59.403 55.000 0.00 0.00 34.13 4.02
1662 1716 1.000607 GTAGTGCTCGTGTGACCAAGA 60.001 52.381 0.00 0.00 0.00 3.02
1780 1834 1.578206 GGCGAACTGTTCTTGGGAGC 61.578 60.000 17.60 11.98 0.00 4.70
1781 1835 1.901650 GCGAACTGTTCTTGGGAGCG 61.902 60.000 17.60 4.55 0.00 5.03
1784 1860 1.734465 GAACTGTTCTTGGGAGCGATG 59.266 52.381 13.13 0.00 0.00 3.84
1799 1875 2.813061 GCGATGTGCTATTTGGCATTT 58.187 42.857 0.00 0.00 44.34 2.32
1801 1877 3.730715 GCGATGTGCTATTTGGCATTTAC 59.269 43.478 0.00 0.00 44.34 2.01
1802 1878 4.733230 GCGATGTGCTATTTGGCATTTACA 60.733 41.667 0.00 0.00 44.34 2.41
1804 1880 5.626543 CGATGTGCTATTTGGCATTTACATC 59.373 40.000 0.00 0.00 44.34 3.06
1805 1881 6.513884 CGATGTGCTATTTGGCATTTACATCT 60.514 38.462 17.44 0.00 44.34 2.90
1806 1882 7.307930 CGATGTGCTATTTGGCATTTACATCTA 60.308 37.037 17.44 0.00 44.34 1.98
1807 1883 7.637631 TGTGCTATTTGGCATTTACATCTAA 57.362 32.000 0.00 0.00 44.34 2.10
1809 1885 8.136800 TGTGCTATTTGGCATTTACATCTAATG 58.863 33.333 0.00 0.00 44.34 1.90
1824 1900 7.298507 ACATCTAATGCAATGTCAAAAATGC 57.701 32.000 0.00 0.00 39.22 3.56
1825 1901 7.101054 ACATCTAATGCAATGTCAAAAATGCT 58.899 30.769 0.00 0.00 39.49 3.79
1826 1902 7.277098 ACATCTAATGCAATGTCAAAAATGCTC 59.723 33.333 0.00 0.00 39.49 4.26
1828 1904 7.380536 TCTAATGCAATGTCAAAAATGCTCTT 58.619 30.769 0.00 0.00 39.49 2.85
1829 1905 8.522003 TCTAATGCAATGTCAAAAATGCTCTTA 58.478 29.630 0.00 0.00 39.49 2.10
1830 1906 9.309516 CTAATGCAATGTCAAAAATGCTCTTAT 57.690 29.630 0.00 0.00 39.49 1.73
1839 1915 9.639563 TGTCAAAAATGCTCTTATATTATGGGA 57.360 29.630 0.00 0.00 0.00 4.37
1840 1916 9.899226 GTCAAAAATGCTCTTATATTATGGGAC 57.101 33.333 0.00 0.00 0.00 4.46
1841 1917 8.783093 TCAAAAATGCTCTTATATTATGGGACG 58.217 33.333 0.00 0.00 0.00 4.79
1842 1918 7.687941 AAAATGCTCTTATATTATGGGACGG 57.312 36.000 0.00 0.00 0.00 4.79
1843 1919 6.620877 AATGCTCTTATATTATGGGACGGA 57.379 37.500 0.00 0.00 0.00 4.69
1845 1921 6.037786 TGCTCTTATATTATGGGACGGAAG 57.962 41.667 0.00 0.00 0.00 3.46
1846 1922 5.046591 TGCTCTTATATTATGGGACGGAAGG 60.047 44.000 0.00 0.00 0.00 3.46
1847 1923 5.187186 GCTCTTATATTATGGGACGGAAGGA 59.813 44.000 0.00 0.00 0.00 3.36
1848 1924 6.628398 GCTCTTATATTATGGGACGGAAGGAG 60.628 46.154 0.00 0.00 0.00 3.69
1849 1925 6.320518 TCTTATATTATGGGACGGAAGGAGT 58.679 40.000 0.00 0.00 0.00 3.85
1850 1926 7.472741 TCTTATATTATGGGACGGAAGGAGTA 58.527 38.462 0.00 0.00 0.00 2.59
1853 1929 1.777941 ATGGGACGGAAGGAGTAGTC 58.222 55.000 0.00 0.00 0.00 2.59
1857 1933 3.245371 TGGGACGGAAGGAGTAGTCTTTA 60.245 47.826 0.00 0.00 34.34 1.85
1866 1942 7.510407 GGAAGGAGTAGTCTTTATTATGCCTT 58.490 38.462 0.00 0.00 34.94 4.35
1889 1965 8.919661 CCTTCTATTTTCTTCATTCACTTTTGC 58.080 33.333 0.00 0.00 0.00 3.68
1892 1968 9.683069 TCTATTTTCTTCATTCACTTTTGCTTC 57.317 29.630 0.00 0.00 0.00 3.86
1893 1969 9.688592 CTATTTTCTTCATTCACTTTTGCTTCT 57.311 29.630 0.00 0.00 0.00 2.85
1895 1971 7.992180 TTTCTTCATTCACTTTTGCTTCTTC 57.008 32.000 0.00 0.00 0.00 2.87
1896 1972 6.698008 TCTTCATTCACTTTTGCTTCTTCA 57.302 33.333 0.00 0.00 0.00 3.02
1897 1973 7.281040 TCTTCATTCACTTTTGCTTCTTCAT 57.719 32.000 0.00 0.00 0.00 2.57
1930 2007 1.079658 AGAGGAGCTAAGGGGAAGTGT 59.920 52.381 0.00 0.00 0.00 3.55
1941 2018 1.541588 GGGGAAGTGTCAAGCAATGTC 59.458 52.381 0.00 0.00 0.00 3.06
1951 2028 4.694037 TGTCAAGCAATGTCTCTCAAGATG 59.306 41.667 0.00 0.00 33.08 2.90
2006 2083 5.465724 GCTCGGTTATCGGTTGAATTTATCT 59.534 40.000 0.00 0.00 39.77 1.98
2047 2124 3.242543 GCAGCTTGTCATACTTTCATCGG 60.243 47.826 0.00 0.00 0.00 4.18
2050 2127 3.000322 GCTTGTCATACTTTCATCGGTCG 60.000 47.826 0.00 0.00 0.00 4.79
2083 2160 6.233434 TCAATGCACTTCTATTCTGAACTGT 58.767 36.000 0.00 0.00 0.00 3.55
2112 2189 4.060038 ACACACGAACAAGAAGACAGAT 57.940 40.909 0.00 0.00 0.00 2.90
2121 2198 2.086054 AGAAGACAGATTGTGCCGAC 57.914 50.000 0.00 0.00 0.00 4.79
2122 2199 1.344438 AGAAGACAGATTGTGCCGACA 59.656 47.619 0.00 0.00 0.00 4.35
2146 2223 3.795688 AACAGTCCATTCACCAGTCAT 57.204 42.857 0.00 0.00 0.00 3.06
2191 2330 1.203313 CGGAGGCAAACGTTTCGTC 59.797 57.895 11.37 15.35 39.99 4.20
2253 2682 3.104843 TGAAAATCGGGCAAAAACCAG 57.895 42.857 0.00 0.00 0.00 4.00
2285 2734 3.066621 ACCACAACGAACTACTTACACGA 59.933 43.478 0.00 0.00 0.00 4.35
2289 2738 5.174398 CACAACGAACTACTTACACGACATT 59.826 40.000 0.00 0.00 0.00 2.71
2320 2769 4.767255 GCACAGGGAGCCCACGAG 62.767 72.222 8.53 0.00 38.92 4.18
2323 2772 4.135153 CAGGGAGCCCACGAGACG 62.135 72.222 8.53 0.00 38.92 4.18
2339 2788 3.175152 GAGACGCTCTCAACACACATAG 58.825 50.000 9.30 0.00 42.90 2.23
2340 2789 2.558795 AGACGCTCTCAACACACATAGT 59.441 45.455 0.00 0.00 0.00 2.12
2341 2790 3.756963 AGACGCTCTCAACACACATAGTA 59.243 43.478 0.00 0.00 0.00 1.82
2342 2791 3.834610 ACGCTCTCAACACACATAGTAC 58.165 45.455 0.00 0.00 0.00 2.73
2343 2792 3.179830 CGCTCTCAACACACATAGTACC 58.820 50.000 0.00 0.00 0.00 3.34
2344 2793 3.522553 GCTCTCAACACACATAGTACCC 58.477 50.000 0.00 0.00 0.00 3.69
2350 2799 4.468510 TCAACACACATAGTACCCCCTAAG 59.531 45.833 0.00 0.00 0.00 2.18
2353 2802 1.046204 ACATAGTACCCCCTAAGCGC 58.954 55.000 0.00 0.00 0.00 5.92
2364 2813 2.126071 TAAGCGCGACAGTGGAGC 60.126 61.111 12.10 2.96 0.00 4.70
2370 2819 2.661537 CGACAGTGGAGCGTGCAA 60.662 61.111 0.00 0.00 0.00 4.08
2371 2820 2.661566 CGACAGTGGAGCGTGCAAG 61.662 63.158 0.00 0.00 0.00 4.01
2372 2821 1.300931 GACAGTGGAGCGTGCAAGA 60.301 57.895 2.99 0.00 0.00 3.02
2373 2822 0.880278 GACAGTGGAGCGTGCAAGAA 60.880 55.000 2.99 0.00 0.00 2.52
2374 2823 0.882042 ACAGTGGAGCGTGCAAGAAG 60.882 55.000 2.99 0.00 0.00 2.85
2375 2824 0.601046 CAGTGGAGCGTGCAAGAAGA 60.601 55.000 2.99 0.00 0.00 2.87
2376 2825 0.322975 AGTGGAGCGTGCAAGAAGAT 59.677 50.000 2.99 0.00 0.00 2.40
2377 2826 1.550524 AGTGGAGCGTGCAAGAAGATA 59.449 47.619 2.99 0.00 0.00 1.98
2378 2827 2.028112 AGTGGAGCGTGCAAGAAGATAA 60.028 45.455 2.99 0.00 0.00 1.75
2379 2828 2.094417 GTGGAGCGTGCAAGAAGATAAC 59.906 50.000 2.99 0.00 0.00 1.89
2380 2829 2.289382 TGGAGCGTGCAAGAAGATAACA 60.289 45.455 2.99 0.00 0.00 2.41
2381 2830 2.939103 GGAGCGTGCAAGAAGATAACAT 59.061 45.455 2.99 0.00 0.00 2.71
2382 2831 3.375299 GGAGCGTGCAAGAAGATAACATT 59.625 43.478 2.99 0.00 0.00 2.71
2383 2832 4.494855 GGAGCGTGCAAGAAGATAACATTC 60.495 45.833 2.99 0.00 0.00 2.67
2384 2833 4.002982 AGCGTGCAAGAAGATAACATTCA 58.997 39.130 2.99 0.00 0.00 2.57
2385 2834 4.637534 AGCGTGCAAGAAGATAACATTCAT 59.362 37.500 2.99 0.00 0.00 2.57
2386 2835 5.817296 AGCGTGCAAGAAGATAACATTCATA 59.183 36.000 2.99 0.00 0.00 2.15
2387 2836 6.316140 AGCGTGCAAGAAGATAACATTCATAA 59.684 34.615 2.99 0.00 0.00 1.90
2388 2837 6.966632 GCGTGCAAGAAGATAACATTCATAAA 59.033 34.615 2.99 0.00 0.00 1.40
2389 2838 7.164826 GCGTGCAAGAAGATAACATTCATAAAG 59.835 37.037 2.99 0.00 0.00 1.85
2390 2839 8.390354 CGTGCAAGAAGATAACATTCATAAAGA 58.610 33.333 0.00 0.00 0.00 2.52
2400 2849 9.382244 GATAACATTCATAAAGAATAACGTGGC 57.618 33.333 0.00 0.00 45.06 5.01
2401 2850 6.751514 ACATTCATAAAGAATAACGTGGCA 57.248 33.333 0.00 0.00 45.06 4.92
2402 2851 6.785191 ACATTCATAAAGAATAACGTGGCAG 58.215 36.000 0.00 0.00 45.06 4.85
2403 2852 6.374333 ACATTCATAAAGAATAACGTGGCAGT 59.626 34.615 0.00 0.00 45.06 4.40
2404 2853 5.794687 TCATAAAGAATAACGTGGCAGTG 57.205 39.130 0.00 0.00 0.00 3.66
2405 2854 4.634004 TCATAAAGAATAACGTGGCAGTGG 59.366 41.667 0.00 0.00 0.00 4.00
2406 2855 2.851263 AAGAATAACGTGGCAGTGGA 57.149 45.000 0.00 0.00 0.00 4.02
2407 2856 2.386661 AGAATAACGTGGCAGTGGAG 57.613 50.000 0.00 0.00 0.00 3.86
2408 2857 0.727398 GAATAACGTGGCAGTGGAGC 59.273 55.000 0.00 0.00 0.00 4.70
2409 2858 1.019278 AATAACGTGGCAGTGGAGCG 61.019 55.000 0.00 0.00 34.64 5.03
2410 2859 2.167398 ATAACGTGGCAGTGGAGCGT 62.167 55.000 0.00 0.00 37.38 5.07
2411 2860 4.969196 ACGTGGCAGTGGAGCGTG 62.969 66.667 0.00 0.00 34.36 5.34
2415 2864 4.643387 GGCAGTGGAGCGTGGGTT 62.643 66.667 0.00 0.00 34.64 4.11
2416 2865 3.357079 GCAGTGGAGCGTGGGTTG 61.357 66.667 0.00 0.00 0.00 3.77
2417 2866 2.111043 CAGTGGAGCGTGGGTTGT 59.889 61.111 0.00 0.00 0.00 3.32
2418 2867 1.369692 CAGTGGAGCGTGGGTTGTA 59.630 57.895 0.00 0.00 0.00 2.41
2419 2868 0.670546 CAGTGGAGCGTGGGTTGTAG 60.671 60.000 0.00 0.00 0.00 2.74
2420 2869 2.033194 GTGGAGCGTGGGTTGTAGC 61.033 63.158 0.00 0.00 0.00 3.58
2421 2870 2.214216 TGGAGCGTGGGTTGTAGCT 61.214 57.895 0.00 0.00 43.33 3.32
2422 2871 1.741770 GGAGCGTGGGTTGTAGCTG 60.742 63.158 0.00 0.00 40.39 4.24
2423 2872 2.358737 AGCGTGGGTTGTAGCTGC 60.359 61.111 0.00 0.00 38.67 5.25
2424 2873 3.431725 GCGTGGGTTGTAGCTGCC 61.432 66.667 0.00 0.00 0.00 4.85
2425 2874 2.746277 CGTGGGTTGTAGCTGCCC 60.746 66.667 0.00 3.36 42.64 5.36
2428 2877 4.002797 GGGTTGTAGCTGCCCAAG 57.997 61.111 0.00 0.00 41.93 3.61
2429 2878 1.678970 GGGTTGTAGCTGCCCAAGG 60.679 63.158 0.00 0.00 41.93 3.61
2430 2879 1.074951 GGTTGTAGCTGCCCAAGGT 59.925 57.895 0.00 0.00 40.55 3.50
2431 2880 1.244019 GGTTGTAGCTGCCCAAGGTG 61.244 60.000 0.00 0.00 37.17 4.00
2432 2881 1.074775 TTGTAGCTGCCCAAGGTGG 59.925 57.895 0.00 0.00 37.17 4.61
2441 2890 4.722700 CCAAGGTGGCCGGTGGAG 62.723 72.222 1.90 0.00 36.21 3.86
2442 2891 4.722700 CAAGGTGGCCGGTGGAGG 62.723 72.222 1.90 0.00 0.00 4.30
2461 2910 1.828979 GGCGACAACCCTTTTATGGA 58.171 50.000 0.00 0.00 0.00 3.41
2462 2911 2.164338 GGCGACAACCCTTTTATGGAA 58.836 47.619 0.00 0.00 0.00 3.53
2463 2912 2.163613 GGCGACAACCCTTTTATGGAAG 59.836 50.000 0.00 0.00 0.00 3.46
2464 2913 2.163613 GCGACAACCCTTTTATGGAAGG 59.836 50.000 0.00 2.73 44.74 3.46
2465 2914 2.163613 CGACAACCCTTTTATGGAAGGC 59.836 50.000 3.95 0.00 43.97 4.35
2466 2915 2.163613 GACAACCCTTTTATGGAAGGCG 59.836 50.000 3.95 1.49 43.97 5.52
2467 2916 1.476488 CAACCCTTTTATGGAAGGCGG 59.524 52.381 3.95 0.00 43.97 6.13
2468 2917 0.683179 ACCCTTTTATGGAAGGCGGC 60.683 55.000 0.00 0.00 43.97 6.53
2469 2918 1.391933 CCCTTTTATGGAAGGCGGCC 61.392 60.000 12.11 12.11 43.97 6.13
2470 2919 0.682855 CCTTTTATGGAAGGCGGCCA 60.683 55.000 23.09 0.00 39.75 5.36
2472 2921 1.067516 CTTTTATGGAAGGCGGCCATG 59.932 52.381 23.09 0.00 45.39 3.66
2473 2922 1.391157 TTTATGGAAGGCGGCCATGC 61.391 55.000 23.09 15.90 45.39 4.06
2474 2923 2.283143 TTATGGAAGGCGGCCATGCT 62.283 55.000 23.09 7.31 45.39 3.79
2475 2924 2.963928 TATGGAAGGCGGCCATGCTG 62.964 60.000 23.09 0.00 45.39 4.41
2485 2934 4.569180 CCATGCTGGCCTACCCGG 62.569 72.222 3.32 0.00 43.38 5.73
2494 2943 3.537874 CCTACCCGGCGGAGAAGG 61.538 72.222 30.79 24.95 0.00 3.46
2495 2944 4.222847 CTACCCGGCGGAGAAGGC 62.223 72.222 30.79 0.00 0.00 4.35
2502 2951 4.856607 GCGGAGAAGGCGTCGGAG 62.857 72.222 0.00 0.00 0.00 4.63
2503 2952 4.856607 CGGAGAAGGCGTCGGAGC 62.857 72.222 0.00 0.00 0.00 4.70
2504 2953 3.453679 GGAGAAGGCGTCGGAGCT 61.454 66.667 0.00 0.00 37.29 4.09
2505 2954 2.202676 GAGAAGGCGTCGGAGCTG 60.203 66.667 0.00 0.00 37.29 4.24
2506 2955 2.676822 AGAAGGCGTCGGAGCTGA 60.677 61.111 0.00 0.00 37.29 4.26
2507 2956 2.010582 GAGAAGGCGTCGGAGCTGAT 62.011 60.000 0.00 0.00 37.29 2.90
2508 2957 1.880340 GAAGGCGTCGGAGCTGATG 60.880 63.158 0.00 0.00 37.29 3.07
2509 2958 3.376935 AAGGCGTCGGAGCTGATGG 62.377 63.158 0.00 0.00 37.29 3.51
2519 2968 3.987404 GCTGATGGCTTCAACGGT 58.013 55.556 4.53 0.00 38.06 4.83
2520 2969 3.153024 GCTGATGGCTTCAACGGTA 57.847 52.632 4.53 0.00 38.06 4.02
2521 2970 1.668419 GCTGATGGCTTCAACGGTAT 58.332 50.000 4.53 0.00 38.06 2.73
2522 2971 2.017049 GCTGATGGCTTCAACGGTATT 58.983 47.619 4.53 0.00 38.06 1.89
2523 2972 2.423538 GCTGATGGCTTCAACGGTATTT 59.576 45.455 4.53 0.00 38.06 1.40
2524 2973 3.119495 GCTGATGGCTTCAACGGTATTTT 60.119 43.478 4.53 0.00 38.06 1.82
2525 2974 4.662145 CTGATGGCTTCAACGGTATTTTC 58.338 43.478 4.53 0.00 32.78 2.29
2526 2975 4.331968 TGATGGCTTCAACGGTATTTTCT 58.668 39.130 0.00 0.00 0.00 2.52
2527 2976 4.764823 TGATGGCTTCAACGGTATTTTCTT 59.235 37.500 0.00 0.00 0.00 2.52
2528 2977 5.242838 TGATGGCTTCAACGGTATTTTCTTT 59.757 36.000 0.00 0.00 0.00 2.52
2529 2978 5.116069 TGGCTTCAACGGTATTTTCTTTC 57.884 39.130 0.00 0.00 0.00 2.62
2530 2979 4.156182 GGCTTCAACGGTATTTTCTTTCG 58.844 43.478 0.00 0.00 0.00 3.46
2531 2980 4.319984 GGCTTCAACGGTATTTTCTTTCGT 60.320 41.667 0.00 0.00 35.48 3.85
2532 2981 5.106987 GGCTTCAACGGTATTTTCTTTCGTA 60.107 40.000 0.00 0.00 33.52 3.43
2533 2982 5.787062 GCTTCAACGGTATTTTCTTTCGTAC 59.213 40.000 0.00 0.00 33.52 3.67
2534 2983 6.347160 GCTTCAACGGTATTTTCTTTCGTACT 60.347 38.462 0.00 0.00 33.52 2.73
2535 2984 7.481275 TTCAACGGTATTTTCTTTCGTACTT 57.519 32.000 0.00 0.00 33.52 2.24
2536 2985 6.879962 TCAACGGTATTTTCTTTCGTACTTG 58.120 36.000 0.00 0.00 33.52 3.16
2537 2986 6.479660 TCAACGGTATTTTCTTTCGTACTTGT 59.520 34.615 0.00 0.00 33.52 3.16
2538 2987 7.651304 TCAACGGTATTTTCTTTCGTACTTGTA 59.349 33.333 0.00 0.00 33.52 2.41
2539 2988 7.572502 ACGGTATTTTCTTTCGTACTTGTAG 57.427 36.000 0.00 0.00 32.03 2.74
2540 2989 7.370383 ACGGTATTTTCTTTCGTACTTGTAGA 58.630 34.615 0.00 0.00 32.03 2.59
2541 2990 7.867403 ACGGTATTTTCTTTCGTACTTGTAGAA 59.133 33.333 0.00 0.00 32.03 2.10
2542 2991 8.371053 CGGTATTTTCTTTCGTACTTGTAGAAG 58.629 37.037 0.00 0.00 35.07 2.85
2543 2992 9.201127 GGTATTTTCTTTCGTACTTGTAGAAGT 57.799 33.333 10.46 10.46 44.90 3.01
2545 2994 8.658499 ATTTTCTTTCGTACTTGTAGAAGTGT 57.342 30.769 15.18 0.00 42.66 3.55
2546 2995 9.754382 ATTTTCTTTCGTACTTGTAGAAGTGTA 57.246 29.630 15.18 0.00 42.66 2.90
2547 2996 9.754382 TTTTCTTTCGTACTTGTAGAAGTGTAT 57.246 29.630 15.18 0.00 42.66 2.29
2548 2997 8.738199 TTCTTTCGTACTTGTAGAAGTGTATG 57.262 34.615 15.18 2.34 42.66 2.39
2549 2998 6.805271 TCTTTCGTACTTGTAGAAGTGTATGC 59.195 38.462 15.18 0.56 42.66 3.14
2550 2999 5.892160 TCGTACTTGTAGAAGTGTATGCT 57.108 39.130 15.18 0.00 42.66 3.79
2551 3000 5.877031 TCGTACTTGTAGAAGTGTATGCTC 58.123 41.667 15.18 0.00 42.66 4.26
2552 3001 5.646793 TCGTACTTGTAGAAGTGTATGCTCT 59.353 40.000 15.18 0.00 42.66 4.09
2553 3002 6.820152 TCGTACTTGTAGAAGTGTATGCTCTA 59.180 38.462 15.18 0.00 42.66 2.43
2554 3003 7.011202 TCGTACTTGTAGAAGTGTATGCTCTAG 59.989 40.741 15.18 0.00 42.66 2.43
2555 3004 7.201626 CGTACTTGTAGAAGTGTATGCTCTAGT 60.202 40.741 15.18 0.00 42.66 2.57
2556 3005 7.469537 ACTTGTAGAAGTGTATGCTCTAGTT 57.530 36.000 4.15 0.00 41.12 2.24
2557 3006 8.577048 ACTTGTAGAAGTGTATGCTCTAGTTA 57.423 34.615 4.15 0.00 41.12 2.24
2558 3007 9.021807 ACTTGTAGAAGTGTATGCTCTAGTTAA 57.978 33.333 4.15 0.00 41.12 2.01
2560 3009 9.803315 TTGTAGAAGTGTATGCTCTAGTTAATG 57.197 33.333 0.00 0.00 0.00 1.90
2561 3010 7.921214 TGTAGAAGTGTATGCTCTAGTTAATGC 59.079 37.037 0.00 0.00 0.00 3.56
2562 3011 6.878317 AGAAGTGTATGCTCTAGTTAATGCA 58.122 36.000 0.00 0.00 39.83 3.96
2563 3012 7.331026 AGAAGTGTATGCTCTAGTTAATGCAA 58.669 34.615 0.00 0.00 38.96 4.08
2564 3013 6.910536 AGTGTATGCTCTAGTTAATGCAAC 57.089 37.500 0.00 0.00 38.96 4.17
2565 3014 5.817816 AGTGTATGCTCTAGTTAATGCAACC 59.182 40.000 0.00 0.00 38.96 3.77
2566 3015 5.584649 GTGTATGCTCTAGTTAATGCAACCA 59.415 40.000 0.00 0.00 38.96 3.67
2567 3016 6.093495 GTGTATGCTCTAGTTAATGCAACCAA 59.907 38.462 0.00 0.00 38.96 3.67
2568 3017 6.657117 TGTATGCTCTAGTTAATGCAACCAAA 59.343 34.615 0.00 0.00 38.96 3.28
2569 3018 6.588719 ATGCTCTAGTTAATGCAACCAAAA 57.411 33.333 0.00 0.00 38.96 2.44
2570 3019 6.398234 TGCTCTAGTTAATGCAACCAAAAA 57.602 33.333 0.00 0.00 37.93 1.94
2591 3040 6.783708 AAAACCGATCTGATAGAAGAGACT 57.216 37.500 0.00 0.00 0.00 3.24
2592 3041 7.883391 AAAACCGATCTGATAGAAGAGACTA 57.117 36.000 0.00 0.00 0.00 2.59
2593 3042 7.504924 AAACCGATCTGATAGAAGAGACTAG 57.495 40.000 0.00 0.00 0.00 2.57
2594 3043 5.556915 ACCGATCTGATAGAAGAGACTAGG 58.443 45.833 0.00 0.00 0.00 3.02
2595 3044 4.394920 CCGATCTGATAGAAGAGACTAGGC 59.605 50.000 0.00 0.00 0.00 3.93
2596 3045 5.000591 CGATCTGATAGAAGAGACTAGGCA 58.999 45.833 0.00 0.00 0.00 4.75
2597 3046 5.122239 CGATCTGATAGAAGAGACTAGGCAG 59.878 48.000 0.00 0.00 33.78 4.85
2598 3047 4.141287 TCTGATAGAAGAGACTAGGCAGC 58.859 47.826 0.00 0.00 33.16 5.25
2599 3048 3.888323 CTGATAGAAGAGACTAGGCAGCA 59.112 47.826 0.00 0.00 0.00 4.41
2600 3049 3.634448 TGATAGAAGAGACTAGGCAGCAC 59.366 47.826 0.00 0.00 0.00 4.40
2601 3050 1.930251 AGAAGAGACTAGGCAGCACA 58.070 50.000 0.00 0.00 0.00 4.57
2602 3051 2.465813 AGAAGAGACTAGGCAGCACAT 58.534 47.619 0.00 0.00 0.00 3.21
2603 3052 2.836981 AGAAGAGACTAGGCAGCACATT 59.163 45.455 0.00 0.00 0.00 2.71
2604 3053 4.026744 AGAAGAGACTAGGCAGCACATTA 58.973 43.478 0.00 0.00 0.00 1.90
2605 3054 4.099266 AGAAGAGACTAGGCAGCACATTAG 59.901 45.833 0.00 0.00 0.00 1.73
2606 3055 3.370104 AGAGACTAGGCAGCACATTAGT 58.630 45.455 0.00 0.00 0.00 2.24
2607 3056 3.383185 AGAGACTAGGCAGCACATTAGTC 59.617 47.826 0.00 13.57 41.32 2.59
2608 3057 3.370104 AGACTAGGCAGCACATTAGTCT 58.630 45.455 16.38 16.38 44.48 3.24
2609 3058 3.772025 AGACTAGGCAGCACATTAGTCTT 59.228 43.478 16.38 6.87 46.11 3.01
2610 3059 3.866651 ACTAGGCAGCACATTAGTCTTG 58.133 45.455 0.00 0.00 0.00 3.02
2611 3060 3.515502 ACTAGGCAGCACATTAGTCTTGA 59.484 43.478 0.00 0.00 0.00 3.02
2612 3061 3.423539 AGGCAGCACATTAGTCTTGAA 57.576 42.857 0.00 0.00 0.00 2.69
2613 3062 3.077359 AGGCAGCACATTAGTCTTGAAC 58.923 45.455 0.00 0.00 0.00 3.18
2614 3063 3.077359 GGCAGCACATTAGTCTTGAACT 58.923 45.455 0.00 0.00 42.33 3.01
2615 3064 3.503748 GGCAGCACATTAGTCTTGAACTT 59.496 43.478 0.00 0.00 39.55 2.66
2616 3065 4.695455 GGCAGCACATTAGTCTTGAACTTA 59.305 41.667 0.00 0.00 39.55 2.24
2617 3066 5.181245 GGCAGCACATTAGTCTTGAACTTAA 59.819 40.000 0.00 0.00 39.55 1.85
2618 3067 6.310197 GCAGCACATTAGTCTTGAACTTAAG 58.690 40.000 0.00 0.00 39.55 1.85
2619 3068 6.147821 GCAGCACATTAGTCTTGAACTTAAGA 59.852 38.462 10.09 0.00 39.55 2.10
2629 3078 5.869579 TCTTGAACTTAAGACATCTTGGCT 58.130 37.500 10.09 0.00 37.28 4.75
2630 3079 5.934625 TCTTGAACTTAAGACATCTTGGCTC 59.065 40.000 10.09 0.14 31.94 4.70
2631 3080 5.489792 TGAACTTAAGACATCTTGGCTCT 57.510 39.130 10.09 0.00 31.94 4.09
2632 3081 5.482908 TGAACTTAAGACATCTTGGCTCTC 58.517 41.667 10.09 0.00 31.94 3.20
2633 3082 5.012046 TGAACTTAAGACATCTTGGCTCTCA 59.988 40.000 10.09 0.00 31.94 3.27
2634 3083 5.690464 ACTTAAGACATCTTGGCTCTCAT 57.310 39.130 10.09 0.00 31.94 2.90
2635 3084 6.798427 ACTTAAGACATCTTGGCTCTCATA 57.202 37.500 10.09 0.00 31.94 2.15
2636 3085 6.578023 ACTTAAGACATCTTGGCTCTCATAC 58.422 40.000 10.09 0.00 31.94 2.39
2637 3086 4.414337 AAGACATCTTGGCTCTCATACC 57.586 45.455 0.00 0.00 31.94 2.73
2638 3087 3.378512 AGACATCTTGGCTCTCATACCA 58.621 45.455 0.00 0.00 18.29 3.25
2639 3088 3.972638 AGACATCTTGGCTCTCATACCAT 59.027 43.478 0.00 0.00 18.29 3.55
2640 3089 4.063689 GACATCTTGGCTCTCATACCATG 58.936 47.826 0.00 0.00 35.42 3.66
2641 3090 2.627515 TCTTGGCTCTCATACCATGC 57.372 50.000 0.00 0.00 35.42 4.06
2642 3091 1.839354 TCTTGGCTCTCATACCATGCA 59.161 47.619 0.00 0.00 35.42 3.96
2643 3092 2.158856 TCTTGGCTCTCATACCATGCAG 60.159 50.000 0.00 0.00 35.42 4.41
2644 3093 1.499368 TGGCTCTCATACCATGCAGA 58.501 50.000 0.00 0.00 0.00 4.26
2645 3094 1.839354 TGGCTCTCATACCATGCAGAA 59.161 47.619 0.00 0.00 0.00 3.02
2646 3095 2.158856 TGGCTCTCATACCATGCAGAAG 60.159 50.000 0.00 0.00 0.00 2.85
2647 3096 2.158842 GGCTCTCATACCATGCAGAAGT 60.159 50.000 0.00 0.00 0.00 3.01
2648 3097 2.871022 GCTCTCATACCATGCAGAAGTG 59.129 50.000 0.00 0.00 0.00 3.16
2663 3112 5.633830 CAGAAGTGCATGTTCTAACCAAT 57.366 39.130 12.53 0.00 32.81 3.16
2664 3113 5.396484 CAGAAGTGCATGTTCTAACCAATG 58.604 41.667 12.53 0.00 32.81 2.82
2665 3114 3.855689 AGTGCATGTTCTAACCAATGC 57.144 42.857 9.88 9.88 44.49 3.56
2669 3118 3.253230 GCATGTTCTAACCAATGCAACC 58.747 45.455 11.28 0.00 43.84 3.77
2670 3119 3.500982 CATGTTCTAACCAATGCAACCG 58.499 45.455 0.00 0.00 0.00 4.44
2671 3120 2.852449 TGTTCTAACCAATGCAACCGA 58.148 42.857 0.00 0.00 0.00 4.69
2672 3121 3.215151 TGTTCTAACCAATGCAACCGAA 58.785 40.909 0.00 0.00 0.00 4.30
2673 3122 3.632604 TGTTCTAACCAATGCAACCGAAA 59.367 39.130 0.00 0.00 0.00 3.46
2674 3123 4.226761 GTTCTAACCAATGCAACCGAAAG 58.773 43.478 0.00 0.00 0.00 2.62
2675 3124 3.745799 TCTAACCAATGCAACCGAAAGA 58.254 40.909 0.00 0.00 0.00 2.52
2676 3125 2.793278 AACCAATGCAACCGAAAGAC 57.207 45.000 0.00 0.00 0.00 3.01
2677 3126 1.981256 ACCAATGCAACCGAAAGACT 58.019 45.000 0.00 0.00 0.00 3.24
2678 3127 1.608590 ACCAATGCAACCGAAAGACTG 59.391 47.619 0.00 0.00 0.00 3.51
2679 3128 1.879380 CCAATGCAACCGAAAGACTGA 59.121 47.619 0.00 0.00 0.00 3.41
2680 3129 2.489329 CCAATGCAACCGAAAGACTGAT 59.511 45.455 0.00 0.00 0.00 2.90
2681 3130 3.426695 CCAATGCAACCGAAAGACTGATC 60.427 47.826 0.00 0.00 0.00 2.92
2682 3131 2.839486 TGCAACCGAAAGACTGATCT 57.161 45.000 0.00 0.00 36.42 2.75
2683 3132 2.416747 TGCAACCGAAAGACTGATCTG 58.583 47.619 0.00 0.00 34.48 2.90
2684 3133 2.037121 TGCAACCGAAAGACTGATCTGA 59.963 45.455 6.60 0.00 34.48 3.27
2685 3134 3.265791 GCAACCGAAAGACTGATCTGAT 58.734 45.455 6.60 0.00 34.48 2.90
2686 3135 3.063180 GCAACCGAAAGACTGATCTGATG 59.937 47.826 6.60 0.00 34.48 3.07
2687 3136 4.498241 CAACCGAAAGACTGATCTGATGA 58.502 43.478 6.60 0.00 34.48 2.92
2688 3137 4.808414 ACCGAAAGACTGATCTGATGAA 57.192 40.909 6.60 0.00 34.48 2.57
2689 3138 5.152623 ACCGAAAGACTGATCTGATGAAA 57.847 39.130 6.60 0.00 34.48 2.69
2690 3139 5.174395 ACCGAAAGACTGATCTGATGAAAG 58.826 41.667 6.60 0.00 34.48 2.62
2691 3140 5.047021 ACCGAAAGACTGATCTGATGAAAGA 60.047 40.000 6.60 0.00 34.48 2.52
2692 3141 5.519566 CCGAAAGACTGATCTGATGAAAGAG 59.480 44.000 6.60 0.00 34.48 2.85
2693 3142 6.328714 CGAAAGACTGATCTGATGAAAGAGA 58.671 40.000 6.60 0.00 34.48 3.10
2694 3143 6.253298 CGAAAGACTGATCTGATGAAAGAGAC 59.747 42.308 6.60 0.00 34.48 3.36
2695 3144 6.855763 AAGACTGATCTGATGAAAGAGACT 57.144 37.500 6.60 0.00 34.48 3.24
2696 3145 7.953005 AAGACTGATCTGATGAAAGAGACTA 57.047 36.000 6.60 0.00 34.48 2.59
2697 3146 7.572523 AGACTGATCTGATGAAAGAGACTAG 57.427 40.000 6.60 0.00 32.29 2.57
2698 3147 6.547141 AGACTGATCTGATGAAAGAGACTAGG 59.453 42.308 6.60 0.00 32.29 3.02
2699 3148 6.194235 ACTGATCTGATGAAAGAGACTAGGT 58.806 40.000 6.60 0.00 0.00 3.08
2700 3149 7.350382 ACTGATCTGATGAAAGAGACTAGGTA 58.650 38.462 6.60 0.00 0.00 3.08
2701 3150 7.502226 ACTGATCTGATGAAAGAGACTAGGTAG 59.498 40.741 6.60 0.00 0.00 3.18
2702 3151 6.264292 TGATCTGATGAAAGAGACTAGGTAGC 59.736 42.308 0.00 0.00 0.00 3.58
2703 3152 5.510430 TCTGATGAAAGAGACTAGGTAGCA 58.490 41.667 0.00 0.00 0.00 3.49
2704 3153 5.358442 TCTGATGAAAGAGACTAGGTAGCAC 59.642 44.000 0.00 0.00 0.00 4.40
2705 3154 5.016831 TGATGAAAGAGACTAGGTAGCACA 58.983 41.667 0.00 0.00 0.00 4.57
2706 3155 5.658634 TGATGAAAGAGACTAGGTAGCACAT 59.341 40.000 0.00 0.00 0.00 3.21
2707 3156 6.155221 TGATGAAAGAGACTAGGTAGCACATT 59.845 38.462 0.00 0.00 0.00 2.71
2708 3157 7.342026 TGATGAAAGAGACTAGGTAGCACATTA 59.658 37.037 0.00 0.00 0.00 1.90
2709 3158 7.661536 TGAAAGAGACTAGGTAGCACATTAT 57.338 36.000 0.00 0.00 0.00 1.28
2710 3159 8.762481 TGAAAGAGACTAGGTAGCACATTATA 57.238 34.615 0.00 0.00 0.00 0.98
2711 3160 8.630917 TGAAAGAGACTAGGTAGCACATTATAC 58.369 37.037 0.00 0.00 0.00 1.47
2712 3161 8.534954 AAAGAGACTAGGTAGCACATTATACA 57.465 34.615 0.00 0.00 0.00 2.29
2713 3162 8.713708 AAGAGACTAGGTAGCACATTATACAT 57.286 34.615 0.00 0.00 0.00 2.29
2714 3163 8.343168 AGAGACTAGGTAGCACATTATACATC 57.657 38.462 0.00 0.00 0.00 3.06
2715 3164 7.945109 AGAGACTAGGTAGCACATTATACATCA 59.055 37.037 0.00 0.00 0.00 3.07
2716 3165 8.478775 AGACTAGGTAGCACATTATACATCAA 57.521 34.615 0.00 0.00 0.00 2.57
2717 3166 8.361139 AGACTAGGTAGCACATTATACATCAAC 58.639 37.037 0.00 0.00 0.00 3.18
2718 3167 8.018537 ACTAGGTAGCACATTATACATCAACA 57.981 34.615 0.00 0.00 0.00 3.33
2719 3168 8.651389 ACTAGGTAGCACATTATACATCAACAT 58.349 33.333 0.00 0.00 0.00 2.71
2721 3170 8.833231 AGGTAGCACATTATACATCAACATAC 57.167 34.615 0.00 0.00 0.00 2.39
2722 3171 8.651389 AGGTAGCACATTATACATCAACATACT 58.349 33.333 0.00 0.00 0.00 2.12
2723 3172 9.923143 GGTAGCACATTATACATCAACATACTA 57.077 33.333 0.00 0.00 0.00 1.82
2726 3175 8.870116 AGCACATTATACATCAACATACTAGGA 58.130 33.333 0.00 0.00 0.00 2.94
2727 3176 8.926710 GCACATTATACATCAACATACTAGGAC 58.073 37.037 0.00 0.00 0.00 3.85
2728 3177 9.981114 CACATTATACATCAACATACTAGGACA 57.019 33.333 0.00 0.00 0.00 4.02
2736 3185 9.770097 ACATCAACATACTAGGACATAATCAAG 57.230 33.333 0.00 0.00 0.00 3.02
2737 3186 9.212641 CATCAACATACTAGGACATAATCAAGG 57.787 37.037 0.00 0.00 0.00 3.61
2738 3187 8.547481 TCAACATACTAGGACATAATCAAGGA 57.453 34.615 0.00 0.00 0.00 3.36
2739 3188 8.988060 TCAACATACTAGGACATAATCAAGGAA 58.012 33.333 0.00 0.00 0.00 3.36
2740 3189 9.265901 CAACATACTAGGACATAATCAAGGAAG 57.734 37.037 0.00 0.00 0.00 3.46
2741 3190 8.783660 ACATACTAGGACATAATCAAGGAAGA 57.216 34.615 0.00 0.00 0.00 2.87
2742 3191 8.865090 ACATACTAGGACATAATCAAGGAAGAG 58.135 37.037 0.00 0.00 0.00 2.85
2743 3192 9.083422 CATACTAGGACATAATCAAGGAAGAGA 57.917 37.037 0.00 0.00 0.00 3.10
2744 3193 9.836179 ATACTAGGACATAATCAAGGAAGAGAT 57.164 33.333 0.00 0.00 0.00 2.75
2745 3194 8.189119 ACTAGGACATAATCAAGGAAGAGATC 57.811 38.462 0.00 0.00 0.00 2.75
2746 3195 7.786943 ACTAGGACATAATCAAGGAAGAGATCA 59.213 37.037 0.00 0.00 0.00 2.92
2747 3196 7.630005 AGGACATAATCAAGGAAGAGATCAT 57.370 36.000 0.00 0.00 0.00 2.45
2748 3197 8.733092 AGGACATAATCAAGGAAGAGATCATA 57.267 34.615 0.00 0.00 0.00 2.15
2749 3198 8.814931 AGGACATAATCAAGGAAGAGATCATAG 58.185 37.037 0.00 0.00 0.00 2.23
2750 3199 8.811017 GGACATAATCAAGGAAGAGATCATAGA 58.189 37.037 0.00 0.00 0.00 1.98
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 7.090173 ACACGAGGAATCAAATGGTTAAAATG 58.910 34.615 0.00 0.00 0.00 2.32
28 29 2.742053 CGACACGAGGAATCAAATGGTT 59.258 45.455 0.00 0.00 0.00 3.67
45 46 6.652062 GGGTTCTAATTTTAAAGACCTCGACA 59.348 38.462 0.00 0.00 0.00 4.35
46 47 6.652062 TGGGTTCTAATTTTAAAGACCTCGAC 59.348 38.462 0.00 0.00 0.00 4.20
111 114 1.448922 TTCCCGTTGTGGCTTTTCCG 61.449 55.000 0.00 0.00 37.80 4.30
113 116 0.741915 TGTTCCCGTTGTGGCTTTTC 59.258 50.000 0.00 0.00 35.87 2.29
145 148 2.012673 CCTCTTGGAATCTGCTTTCGG 58.987 52.381 0.00 0.00 34.57 4.30
148 151 2.165998 GTGCCTCTTGGAATCTGCTTT 58.834 47.619 0.00 0.00 34.57 3.51
149 152 1.074405 TGTGCCTCTTGGAATCTGCTT 59.926 47.619 0.00 0.00 34.57 3.91
150 153 0.694771 TGTGCCTCTTGGAATCTGCT 59.305 50.000 0.00 0.00 34.57 4.24
151 154 1.093159 CTGTGCCTCTTGGAATCTGC 58.907 55.000 0.00 0.00 34.57 4.26
152 155 1.093159 GCTGTGCCTCTTGGAATCTG 58.907 55.000 0.00 0.00 34.57 2.90
153 156 0.034670 GGCTGTGCCTCTTGGAATCT 60.035 55.000 0.73 0.00 46.69 2.40
154 157 2.486796 GGCTGTGCCTCTTGGAATC 58.513 57.895 0.73 0.00 46.69 2.52
155 158 4.751431 GGCTGTGCCTCTTGGAAT 57.249 55.556 0.73 0.00 46.69 3.01
169 172 0.252012 CCTCCGGGAGAGATATGGCT 60.252 60.000 25.60 0.00 46.50 4.75
197 200 7.642586 CCTCTCGAAAACGAACAAAATTAGTTT 59.357 33.333 0.00 0.00 36.70 2.66
198 201 7.130269 CCTCTCGAAAACGAACAAAATTAGTT 58.870 34.615 0.00 0.00 0.00 2.24
199 202 6.656003 CCTCTCGAAAACGAACAAAATTAGT 58.344 36.000 0.00 0.00 0.00 2.24
200 203 5.564127 GCCTCTCGAAAACGAACAAAATTAG 59.436 40.000 0.00 0.00 0.00 1.73
202 205 4.201970 TGCCTCTCGAAAACGAACAAAATT 60.202 37.500 0.00 0.00 0.00 1.82
203 206 3.314080 TGCCTCTCGAAAACGAACAAAAT 59.686 39.130 0.00 0.00 0.00 1.82
204 207 2.678836 TGCCTCTCGAAAACGAACAAAA 59.321 40.909 0.00 0.00 0.00 2.44
205 208 2.031191 GTGCCTCTCGAAAACGAACAAA 59.969 45.455 0.00 0.00 0.00 2.83
206 209 1.595794 GTGCCTCTCGAAAACGAACAA 59.404 47.619 0.00 0.00 0.00 2.83
207 210 1.214367 GTGCCTCTCGAAAACGAACA 58.786 50.000 0.00 0.00 0.00 3.18
208 211 0.161024 CGTGCCTCTCGAAAACGAAC 59.839 55.000 0.00 0.00 36.38 3.95
209 212 0.942410 CCGTGCCTCTCGAAAACGAA 60.942 55.000 0.00 0.00 36.38 3.85
210 213 1.372499 CCGTGCCTCTCGAAAACGA 60.372 57.895 0.00 0.00 36.38 3.85
211 214 3.011760 GCCGTGCCTCTCGAAAACG 62.012 63.158 0.00 0.00 0.00 3.60
224 227 2.507992 CTTCTGCGAGAGGCCGTG 60.508 66.667 0.00 0.00 42.61 4.94
225 228 4.443266 GCTTCTGCGAGAGGCCGT 62.443 66.667 0.00 0.00 40.95 5.68
326 350 7.479150 CACATGTTTTTGGCTTTTTAAATGGT 58.521 30.769 0.00 0.00 0.00 3.55
327 351 6.417339 GCACATGTTTTTGGCTTTTTAAATGG 59.583 34.615 0.00 0.00 0.00 3.16
328 352 6.417339 GGCACATGTTTTTGGCTTTTTAAATG 59.583 34.615 0.00 0.00 35.47 2.32
333 357 3.350833 TGGCACATGTTTTTGGCTTTTT 58.649 36.364 0.00 0.00 39.03 1.94
338 362 3.772060 TTTTTGGCACATGTTTTTGGC 57.228 38.095 0.00 0.00 39.30 4.52
382 406 2.982470 CGTGTCACGTTTTAGGTACTCC 59.018 50.000 17.30 0.00 36.95 3.85
397 421 1.586826 CAACCGTCGTCACGTGTCA 60.587 57.895 16.51 0.00 45.17 3.58
409 433 2.434884 CGCCATGCTCTCAACCGT 60.435 61.111 0.00 0.00 0.00 4.83
420 444 1.140161 CATTTGAGGTGGCGCCATG 59.860 57.895 35.23 21.20 40.61 3.66
443 467 1.829222 CTTCTACGGAAGCCTACCCAA 59.171 52.381 0.00 0.00 41.80 4.12
522 546 2.044832 GCTATGTTGCGCCAGAGCAG 62.045 60.000 22.81 6.95 46.33 4.24
523 547 2.108514 GCTATGTTGCGCCAGAGCA 61.109 57.895 22.81 6.79 46.33 4.26
549 573 3.762288 TGTGTATGTTCTAGGACTCGCTT 59.238 43.478 2.07 0.00 0.00 4.68
551 575 3.119602 TGTGTGTATGTTCTAGGACTCGC 60.120 47.826 2.07 1.11 0.00 5.03
566 590 1.666599 GGACGCGTGTATGTGTGTGTA 60.667 52.381 20.70 0.00 31.57 2.90
588 617 0.521735 GCCTGGTTTTCGGATGACAC 59.478 55.000 0.00 0.00 0.00 3.67
593 622 1.234615 CGTGTGCCTGGTTTTCGGAT 61.235 55.000 0.00 0.00 0.00 4.18
607 636 2.415843 ACACTCCGTGTCCGTGTG 59.584 61.111 0.00 0.00 43.92 3.82
686 715 3.008485 AGAGAGGCTGGACTTGTTTAAGG 59.992 47.826 0.00 0.00 38.26 2.69
687 716 4.020662 AGAGAGAGGCTGGACTTGTTTAAG 60.021 45.833 0.00 0.00 39.86 1.85
739 775 2.289565 GCCCCGTCTTTTTCTGGATAG 58.710 52.381 0.00 0.00 0.00 2.08
762 798 2.743718 CGTGGAAGGCTGACAGGT 59.256 61.111 4.26 0.00 0.00 4.00
821 857 0.835971 TGGTGGAACTGGAGCTGCTA 60.836 55.000 6.82 0.00 36.74 3.49
831 867 1.164041 CGCGGTTCTTTGGTGGAACT 61.164 55.000 0.00 0.00 41.71 3.01
845 881 3.834799 GGGACTCGAATCCGCGGT 61.835 66.667 27.15 6.47 39.97 5.68
853 889 2.031465 GCGGTTTGGGGACTCGAA 59.969 61.111 0.00 0.00 0.00 3.71
855 891 4.367023 TCGCGGTTTGGGGACTCG 62.367 66.667 6.13 0.00 0.00 4.18
900 936 1.202498 GGCGCGAAGGTTTATAGGAGT 60.202 52.381 12.10 0.00 0.00 3.85
901 937 1.068741 AGGCGCGAAGGTTTATAGGAG 59.931 52.381 12.10 0.00 0.00 3.69
902 938 1.117150 AGGCGCGAAGGTTTATAGGA 58.883 50.000 12.10 0.00 0.00 2.94
903 939 1.217882 CAGGCGCGAAGGTTTATAGG 58.782 55.000 12.10 0.00 0.00 2.57
904 940 0.582005 GCAGGCGCGAAGGTTTATAG 59.418 55.000 12.10 0.00 0.00 1.31
905 941 0.108089 TGCAGGCGCGAAGGTTTATA 60.108 50.000 12.10 0.00 42.97 0.98
928 964 4.401022 TGATGGAGATTTGTTGAAGTGCT 58.599 39.130 0.00 0.00 0.00 4.40
942 978 3.907474 TGGGTACACTTTCTTGATGGAGA 59.093 43.478 0.00 0.00 0.00 3.71
944 980 4.622933 CGATGGGTACACTTTCTTGATGGA 60.623 45.833 0.00 0.00 0.00 3.41
945 981 3.623060 CGATGGGTACACTTTCTTGATGG 59.377 47.826 0.00 0.00 0.00 3.51
970 1006 2.337583 GCACTCGTCTATGCTTTGTGA 58.662 47.619 0.00 0.00 38.84 3.58
982 1018 2.181205 CATCTCTTCTTCGCACTCGTC 58.819 52.381 0.00 0.00 36.96 4.20
988 1024 2.102084 CTGGATCCATCTCTTCTTCGCA 59.898 50.000 16.63 0.00 0.00 5.10
990 1026 2.547642 GGCTGGATCCATCTCTTCTTCG 60.548 54.545 16.63 0.00 0.00 3.79
1198 1235 1.135257 AGGATCGCTTCGTGAAGACAG 60.135 52.381 13.60 4.22 40.79 3.51
1239 1278 2.436115 GGTGCAGGCCGGTTAGTC 60.436 66.667 1.90 0.00 0.00 2.59
1468 1513 2.124403 GCTCCCCATCACCAGCAG 60.124 66.667 0.00 0.00 0.00 4.24
1512 1557 9.790389 ATAGTACAGAAGTCAGAAAGAATTACG 57.210 33.333 0.00 0.00 34.14 3.18
1514 1559 9.587772 GCATAGTACAGAAGTCAGAAAGAATTA 57.412 33.333 0.00 0.00 34.14 1.40
1515 1560 7.550906 GGCATAGTACAGAAGTCAGAAAGAATT 59.449 37.037 0.00 0.00 37.23 2.17
1558 1603 3.117171 CGCTGGTCTCACTGCAGC 61.117 66.667 15.27 0.00 35.35 5.25
1600 1645 7.536855 AGTGGCGTACATATTAGAATAGCTAC 58.463 38.462 0.00 0.00 34.54 3.58
1620 1666 0.108585 TGACAGGAACCTGAAGTGGC 59.891 55.000 25.03 2.09 46.30 5.01
1631 1677 1.813178 CGAGCACTACTCTGACAGGAA 59.187 52.381 1.81 0.00 43.85 3.36
1633 1679 1.135546 CACGAGCACTACTCTGACAGG 60.136 57.143 1.81 0.00 43.85 4.00
1659 1713 4.499696 CCTGCAAAACCAACGAGAATTCTT 60.500 41.667 9.87 0.00 0.00 2.52
1662 1716 2.035832 CCCTGCAAAACCAACGAGAATT 59.964 45.455 0.00 0.00 0.00 2.17
1799 1875 8.252417 AGCATTTTTGACATTGCATTAGATGTA 58.748 29.630 1.78 0.00 36.67 2.29
1801 1877 7.491372 AGAGCATTTTTGACATTGCATTAGATG 59.509 33.333 0.00 0.00 37.56 2.90
1802 1878 7.553334 AGAGCATTTTTGACATTGCATTAGAT 58.447 30.769 0.00 0.00 37.56 1.98
1804 1880 7.591006 AAGAGCATTTTTGACATTGCATTAG 57.409 32.000 0.00 0.00 37.56 1.73
1806 1882 9.826574 ATATAAGAGCATTTTTGACATTGCATT 57.173 25.926 0.00 0.00 37.56 3.56
1807 1883 9.826574 AATATAAGAGCATTTTTGACATTGCAT 57.173 25.926 0.00 0.00 37.56 3.96
1814 1890 9.899226 GTCCCATAATATAAGAGCATTTTTGAC 57.101 33.333 0.00 0.00 0.00 3.18
1815 1891 8.783093 CGTCCCATAATATAAGAGCATTTTTGA 58.217 33.333 0.00 0.00 0.00 2.69
1816 1892 8.023128 CCGTCCCATAATATAAGAGCATTTTTG 58.977 37.037 0.00 0.00 0.00 2.44
1818 1894 7.458397 TCCGTCCCATAATATAAGAGCATTTT 58.542 34.615 0.00 0.00 0.00 1.82
1819 1895 7.016153 TCCGTCCCATAATATAAGAGCATTT 57.984 36.000 0.00 0.00 0.00 2.32
1823 1899 5.187186 TCCTTCCGTCCCATAATATAAGAGC 59.813 44.000 0.00 0.00 0.00 4.09
1824 1900 6.437793 ACTCCTTCCGTCCCATAATATAAGAG 59.562 42.308 0.00 0.00 0.00 2.85
1825 1901 6.320518 ACTCCTTCCGTCCCATAATATAAGA 58.679 40.000 0.00 0.00 0.00 2.10
1826 1902 6.607004 ACTCCTTCCGTCCCATAATATAAG 57.393 41.667 0.00 0.00 0.00 1.73
1828 1904 6.797707 ACTACTCCTTCCGTCCCATAATATA 58.202 40.000 0.00 0.00 0.00 0.86
1829 1905 5.652324 ACTACTCCTTCCGTCCCATAATAT 58.348 41.667 0.00 0.00 0.00 1.28
1830 1906 5.070823 ACTACTCCTTCCGTCCCATAATA 57.929 43.478 0.00 0.00 0.00 0.98
1831 1907 3.896272 GACTACTCCTTCCGTCCCATAAT 59.104 47.826 0.00 0.00 0.00 1.28
1834 1910 1.288335 AGACTACTCCTTCCGTCCCAT 59.712 52.381 0.00 0.00 0.00 4.00
1835 1911 0.702902 AGACTACTCCTTCCGTCCCA 59.297 55.000 0.00 0.00 0.00 4.37
1836 1912 1.849977 AAGACTACTCCTTCCGTCCC 58.150 55.000 0.00 0.00 0.00 4.46
1837 1913 5.595257 AATAAAGACTACTCCTTCCGTCC 57.405 43.478 0.00 0.00 0.00 4.79
1838 1914 6.641723 GCATAATAAAGACTACTCCTTCCGTC 59.358 42.308 0.00 0.00 0.00 4.79
1839 1915 6.462628 GGCATAATAAAGACTACTCCTTCCGT 60.463 42.308 0.00 0.00 0.00 4.69
1840 1916 5.927115 GGCATAATAAAGACTACTCCTTCCG 59.073 44.000 0.00 0.00 0.00 4.30
1841 1917 7.068686 AGGCATAATAAAGACTACTCCTTCC 57.931 40.000 0.00 0.00 0.00 3.46
1842 1918 8.425703 AGAAGGCATAATAAAGACTACTCCTTC 58.574 37.037 0.00 0.00 43.56 3.46
1843 1919 8.325477 AGAAGGCATAATAAAGACTACTCCTT 57.675 34.615 0.00 0.00 33.39 3.36
1866 1942 9.683069 GAAGCAAAAGTGAATGAAGAAAATAGA 57.317 29.630 0.00 0.00 0.00 1.98
1874 1950 6.921857 ACATGAAGAAGCAAAAGTGAATGAAG 59.078 34.615 0.00 0.00 0.00 3.02
1877 1953 5.981315 ACACATGAAGAAGCAAAAGTGAATG 59.019 36.000 0.00 0.00 0.00 2.67
1878 1954 6.152932 ACACATGAAGAAGCAAAAGTGAAT 57.847 33.333 0.00 0.00 0.00 2.57
1889 1965 5.724328 TCTAGCAGGTTACACATGAAGAAG 58.276 41.667 0.00 0.00 30.30 2.85
1891 1967 4.160439 CCTCTAGCAGGTTACACATGAAGA 59.840 45.833 0.00 0.00 37.53 2.87
1892 1968 4.160439 TCCTCTAGCAGGTTACACATGAAG 59.840 45.833 0.00 0.00 43.95 3.02
1893 1969 4.093743 TCCTCTAGCAGGTTACACATGAA 58.906 43.478 0.00 0.00 43.95 2.57
1895 1971 4.052159 CTCCTCTAGCAGGTTACACATG 57.948 50.000 7.76 0.00 43.95 3.21
1930 2007 3.688185 GCATCTTGAGAGACATTGCTTGA 59.312 43.478 0.00 0.00 33.99 3.02
1941 2018 1.880340 GTCGCGGGCATCTTGAGAG 60.880 63.158 6.13 0.00 0.00 3.20
1951 2028 1.659098 GCATATATACAAGTCGCGGGC 59.341 52.381 6.13 0.00 0.00 6.13
2011 2088 5.939883 TGACAAGCTGCTAAATAACATGTCT 59.060 36.000 20.79 0.00 36.51 3.41
2023 2100 4.805719 CGATGAAAGTATGACAAGCTGCTA 59.194 41.667 0.90 0.00 0.00 3.49
2050 2127 3.265791 AGAAGTGCATTGAGTCGATTCC 58.734 45.455 5.38 0.00 0.00 3.01
2083 2160 4.061357 TCTTGTTCGTGTGTTCCACATA 57.939 40.909 0.00 0.00 46.32 2.29
2133 2210 2.026915 TGTGAGGGATGACTGGTGAATG 60.027 50.000 0.00 0.00 0.00 2.67
2221 2360 5.043248 GCCCGATTTTCATAATCAACAAGG 58.957 41.667 0.00 0.00 0.00 3.61
2228 2367 5.872070 TGGTTTTTGCCCGATTTTCATAATC 59.128 36.000 0.00 0.00 0.00 1.75
2253 2682 5.056894 AGTTCGTTGTGGTATGTCTACTC 57.943 43.478 0.00 0.00 0.00 2.59
2285 2734 0.956902 GCGGACGTGGGGTTTAATGT 60.957 55.000 0.00 0.00 0.00 2.71
2289 2738 2.030862 GTGCGGACGTGGGGTTTA 59.969 61.111 0.00 0.00 0.00 2.01
2311 2760 3.444805 GAGAGCGTCTCGTGGGCT 61.445 66.667 4.10 4.10 40.29 5.19
2318 2767 2.071688 ATGTGTGTTGAGAGCGTCTC 57.928 50.000 7.74 7.74 43.65 3.36
2320 2769 2.947852 ACTATGTGTGTTGAGAGCGTC 58.052 47.619 0.00 0.00 0.00 5.19
2323 2772 3.522553 GGGTACTATGTGTGTTGAGAGC 58.477 50.000 0.00 0.00 0.00 4.09
2339 2788 2.105729 GTCGCGCTTAGGGGGTAC 59.894 66.667 5.56 6.69 0.00 3.34
2340 2789 2.362760 TGTCGCGCTTAGGGGGTA 60.363 61.111 5.56 1.91 0.00 3.69
2341 2790 3.771160 CTGTCGCGCTTAGGGGGT 61.771 66.667 5.56 0.00 0.00 4.95
2342 2791 3.771160 ACTGTCGCGCTTAGGGGG 61.771 66.667 5.56 7.01 0.00 5.40
2343 2792 2.509336 CACTGTCGCGCTTAGGGG 60.509 66.667 5.56 0.00 0.00 4.79
2344 2793 2.509336 CCACTGTCGCGCTTAGGG 60.509 66.667 5.56 1.32 0.00 3.53
2353 2802 2.661537 TTGCACGCTCCACTGTCG 60.662 61.111 0.00 0.00 0.00 4.35
2364 2813 8.390354 TCTTTATGAATGTTATCTTCTTGCACG 58.610 33.333 0.00 0.00 0.00 5.34
2374 2823 9.382244 GCCACGTTATTCTTTATGAATGTTATC 57.618 33.333 3.95 0.00 44.40 1.75
2375 2824 8.898761 TGCCACGTTATTCTTTATGAATGTTAT 58.101 29.630 3.95 0.00 44.40 1.89
2376 2825 8.270080 TGCCACGTTATTCTTTATGAATGTTA 57.730 30.769 3.95 0.00 44.40 2.41
2377 2826 7.094377 ACTGCCACGTTATTCTTTATGAATGTT 60.094 33.333 3.95 0.00 44.40 2.71
2378 2827 6.374333 ACTGCCACGTTATTCTTTATGAATGT 59.626 34.615 3.95 0.00 44.40 2.71
2379 2828 6.688385 CACTGCCACGTTATTCTTTATGAATG 59.312 38.462 3.95 0.00 44.40 2.67
2380 2829 6.183360 CCACTGCCACGTTATTCTTTATGAAT 60.183 38.462 0.00 0.00 46.22 2.57
2381 2830 5.123186 CCACTGCCACGTTATTCTTTATGAA 59.877 40.000 0.00 0.00 39.24 2.57
2382 2831 4.634004 CCACTGCCACGTTATTCTTTATGA 59.366 41.667 0.00 0.00 0.00 2.15
2383 2832 4.634004 TCCACTGCCACGTTATTCTTTATG 59.366 41.667 0.00 0.00 0.00 1.90
2384 2833 4.839121 TCCACTGCCACGTTATTCTTTAT 58.161 39.130 0.00 0.00 0.00 1.40
2385 2834 4.250464 CTCCACTGCCACGTTATTCTTTA 58.750 43.478 0.00 0.00 0.00 1.85
2386 2835 3.074412 CTCCACTGCCACGTTATTCTTT 58.926 45.455 0.00 0.00 0.00 2.52
2387 2836 2.699954 CTCCACTGCCACGTTATTCTT 58.300 47.619 0.00 0.00 0.00 2.52
2388 2837 1.676014 GCTCCACTGCCACGTTATTCT 60.676 52.381 0.00 0.00 0.00 2.40
2389 2838 0.727398 GCTCCACTGCCACGTTATTC 59.273 55.000 0.00 0.00 0.00 1.75
2390 2839 1.019278 CGCTCCACTGCCACGTTATT 61.019 55.000 0.00 0.00 0.00 1.40
2391 2840 1.447838 CGCTCCACTGCCACGTTAT 60.448 57.895 0.00 0.00 0.00 1.89
2392 2841 2.048597 CGCTCCACTGCCACGTTA 60.049 61.111 0.00 0.00 0.00 3.18
2393 2842 4.235762 ACGCTCCACTGCCACGTT 62.236 61.111 0.00 0.00 32.09 3.99
2394 2843 4.969196 CACGCTCCACTGCCACGT 62.969 66.667 0.00 0.00 37.47 4.49
2398 2847 4.643387 AACCCACGCTCCACTGCC 62.643 66.667 0.00 0.00 0.00 4.85
2399 2848 2.725203 TACAACCCACGCTCCACTGC 62.725 60.000 0.00 0.00 0.00 4.40
2400 2849 0.670546 CTACAACCCACGCTCCACTG 60.671 60.000 0.00 0.00 0.00 3.66
2401 2850 1.671742 CTACAACCCACGCTCCACT 59.328 57.895 0.00 0.00 0.00 4.00
2402 2851 2.033194 GCTACAACCCACGCTCCAC 61.033 63.158 0.00 0.00 0.00 4.02
2403 2852 2.214216 AGCTACAACCCACGCTCCA 61.214 57.895 0.00 0.00 0.00 3.86
2404 2853 1.741770 CAGCTACAACCCACGCTCC 60.742 63.158 0.00 0.00 0.00 4.70
2405 2854 2.391389 GCAGCTACAACCCACGCTC 61.391 63.158 0.00 0.00 0.00 5.03
2406 2855 2.358737 GCAGCTACAACCCACGCT 60.359 61.111 0.00 0.00 0.00 5.07
2407 2856 3.431725 GGCAGCTACAACCCACGC 61.432 66.667 0.00 0.00 0.00 5.34
2408 2857 2.746277 GGGCAGCTACAACCCACG 60.746 66.667 8.11 0.00 43.64 4.94
2411 2860 1.678970 CCTTGGGCAGCTACAACCC 60.679 63.158 6.38 6.38 44.52 4.11
2412 2861 1.074951 ACCTTGGGCAGCTACAACC 59.925 57.895 0.00 0.00 0.00 3.77
2413 2862 1.244019 CCACCTTGGGCAGCTACAAC 61.244 60.000 0.00 0.00 32.67 3.32
2414 2863 1.074775 CCACCTTGGGCAGCTACAA 59.925 57.895 0.00 0.00 32.67 2.41
2415 2864 2.756400 CCACCTTGGGCAGCTACA 59.244 61.111 0.00 0.00 32.67 2.74
2424 2873 4.722700 CTCCACCGGCCACCTTGG 62.723 72.222 0.00 0.00 41.55 3.61
2425 2874 4.722700 CCTCCACCGGCCACCTTG 62.723 72.222 0.00 0.00 0.00 3.61
2435 2884 4.717313 GGGTTGTCGCCCTCCACC 62.717 72.222 0.00 0.00 45.22 4.61
2442 2891 1.828979 TCCATAAAAGGGTTGTCGCC 58.171 50.000 0.00 0.00 0.00 5.54
2443 2892 2.163613 CCTTCCATAAAAGGGTTGTCGC 59.836 50.000 0.00 0.00 41.86 5.19
2444 2893 2.163613 GCCTTCCATAAAAGGGTTGTCG 59.836 50.000 4.93 0.00 45.07 4.35
2445 2894 2.163613 CGCCTTCCATAAAAGGGTTGTC 59.836 50.000 4.93 0.00 45.07 3.18
2446 2895 2.167662 CGCCTTCCATAAAAGGGTTGT 58.832 47.619 4.93 0.00 45.07 3.32
2447 2896 1.476488 CCGCCTTCCATAAAAGGGTTG 59.524 52.381 4.93 0.00 45.07 3.77
2448 2897 1.847328 CCGCCTTCCATAAAAGGGTT 58.153 50.000 4.93 0.00 45.07 4.11
2449 2898 0.683179 GCCGCCTTCCATAAAAGGGT 60.683 55.000 4.93 0.00 45.07 4.34
2450 2899 1.391933 GGCCGCCTTCCATAAAAGGG 61.392 60.000 0.71 0.00 45.07 3.95
2452 2901 1.067516 CATGGCCGCCTTCCATAAAAG 59.932 52.381 11.61 0.00 42.11 2.27
2453 2902 1.110442 CATGGCCGCCTTCCATAAAA 58.890 50.000 11.61 0.00 42.11 1.52
2454 2903 1.391157 GCATGGCCGCCTTCCATAAA 61.391 55.000 11.61 0.00 42.11 1.40
2455 2904 1.827789 GCATGGCCGCCTTCCATAA 60.828 57.895 11.61 0.00 42.11 1.90
2456 2905 2.203337 GCATGGCCGCCTTCCATA 60.203 61.111 11.61 0.00 42.11 2.74
2457 2906 4.133373 AGCATGGCCGCCTTCCAT 62.133 61.111 11.61 0.00 44.70 3.41
2477 2926 3.537874 CCTTCTCCGCCGGGTAGG 61.538 72.222 1.90 3.88 44.97 3.18
2478 2927 4.222847 GCCTTCTCCGCCGGGTAG 62.223 72.222 1.90 0.00 33.83 3.18
2485 2934 4.856607 CTCCGACGCCTTCTCCGC 62.857 72.222 0.00 0.00 0.00 5.54
2486 2935 4.856607 GCTCCGACGCCTTCTCCG 62.857 72.222 0.00 0.00 0.00 4.63
2487 2936 3.453679 AGCTCCGACGCCTTCTCC 61.454 66.667 0.00 0.00 0.00 3.71
2488 2937 2.010582 ATCAGCTCCGACGCCTTCTC 62.011 60.000 0.00 0.00 0.00 2.87
2489 2938 2.055042 ATCAGCTCCGACGCCTTCT 61.055 57.895 0.00 0.00 0.00 2.85
2490 2939 1.880340 CATCAGCTCCGACGCCTTC 60.880 63.158 0.00 0.00 0.00 3.46
2491 2940 2.185350 CATCAGCTCCGACGCCTT 59.815 61.111 0.00 0.00 0.00 4.35
2492 2941 3.842923 CCATCAGCTCCGACGCCT 61.843 66.667 0.00 0.00 0.00 5.52
2502 2951 1.668419 ATACCGTTGAAGCCATCAGC 58.332 50.000 0.00 0.00 39.77 4.26
2503 2952 4.396166 AGAAAATACCGTTGAAGCCATCAG 59.604 41.667 0.00 0.00 39.77 2.90
2504 2953 4.331968 AGAAAATACCGTTGAAGCCATCA 58.668 39.130 0.00 0.00 35.85 3.07
2505 2954 4.965119 AGAAAATACCGTTGAAGCCATC 57.035 40.909 0.00 0.00 0.00 3.51
2506 2955 5.619086 CGAAAGAAAATACCGTTGAAGCCAT 60.619 40.000 0.00 0.00 0.00 4.40
2507 2956 4.319911 CGAAAGAAAATACCGTTGAAGCCA 60.320 41.667 0.00 0.00 0.00 4.75
2508 2957 4.156182 CGAAAGAAAATACCGTTGAAGCC 58.844 43.478 0.00 0.00 0.00 4.35
2509 2958 4.779987 ACGAAAGAAAATACCGTTGAAGC 58.220 39.130 0.00 0.00 0.00 3.86
2510 2959 7.113704 AGTACGAAAGAAAATACCGTTGAAG 57.886 36.000 0.00 0.00 35.05 3.02
2511 2960 7.011295 ACAAGTACGAAAGAAAATACCGTTGAA 59.989 33.333 0.00 0.00 35.05 2.69
2512 2961 6.479660 ACAAGTACGAAAGAAAATACCGTTGA 59.520 34.615 0.00 0.00 35.05 3.18
2513 2962 6.652245 ACAAGTACGAAAGAAAATACCGTTG 58.348 36.000 0.00 0.00 35.05 4.10
2514 2963 6.849588 ACAAGTACGAAAGAAAATACCGTT 57.150 33.333 0.00 0.00 35.05 4.44
2515 2964 7.370383 TCTACAAGTACGAAAGAAAATACCGT 58.630 34.615 0.00 0.00 37.27 4.83
2516 2965 7.801547 TCTACAAGTACGAAAGAAAATACCG 57.198 36.000 0.00 0.00 0.00 4.02
2517 2966 9.201127 ACTTCTACAAGTACGAAAGAAAATACC 57.799 33.333 0.00 0.00 41.39 2.73
2519 2968 9.754382 ACACTTCTACAAGTACGAAAGAAAATA 57.246 29.630 0.00 0.00 41.24 1.40
2520 2969 8.658499 ACACTTCTACAAGTACGAAAGAAAAT 57.342 30.769 0.00 0.00 41.24 1.82
2521 2970 9.754382 ATACACTTCTACAAGTACGAAAGAAAA 57.246 29.630 0.00 0.00 41.24 2.29
2522 2971 9.188588 CATACACTTCTACAAGTACGAAAGAAA 57.811 33.333 0.00 0.00 41.24 2.52
2523 2972 7.327761 GCATACACTTCTACAAGTACGAAAGAA 59.672 37.037 0.00 0.00 41.24 2.52
2524 2973 6.805271 GCATACACTTCTACAAGTACGAAAGA 59.195 38.462 0.00 0.00 41.24 2.52
2525 2974 6.807230 AGCATACACTTCTACAAGTACGAAAG 59.193 38.462 0.00 0.00 41.24 2.62
2526 2975 6.684686 AGCATACACTTCTACAAGTACGAAA 58.315 36.000 0.00 0.00 41.24 3.46
2527 2976 6.150641 AGAGCATACACTTCTACAAGTACGAA 59.849 38.462 0.00 0.00 41.24 3.85
2528 2977 5.646793 AGAGCATACACTTCTACAAGTACGA 59.353 40.000 0.00 0.00 41.24 3.43
2529 2978 5.881447 AGAGCATACACTTCTACAAGTACG 58.119 41.667 0.00 0.00 41.24 3.67
2530 2979 7.987649 ACTAGAGCATACACTTCTACAAGTAC 58.012 38.462 0.00 0.00 41.24 2.73
2531 2980 8.577048 AACTAGAGCATACACTTCTACAAGTA 57.423 34.615 0.00 0.00 41.24 2.24
2532 2981 7.469537 AACTAGAGCATACACTTCTACAAGT 57.530 36.000 0.00 0.00 44.26 3.16
2534 2983 9.803315 CATTAACTAGAGCATACACTTCTACAA 57.197 33.333 0.00 0.00 0.00 2.41
2535 2984 7.921214 GCATTAACTAGAGCATACACTTCTACA 59.079 37.037 0.00 0.00 0.00 2.74
2536 2985 7.921214 TGCATTAACTAGAGCATACACTTCTAC 59.079 37.037 0.00 0.00 31.05 2.59
2537 2986 8.007405 TGCATTAACTAGAGCATACACTTCTA 57.993 34.615 0.00 0.00 31.05 2.10
2538 2987 6.878317 TGCATTAACTAGAGCATACACTTCT 58.122 36.000 0.00 0.00 31.05 2.85
2539 2988 7.402640 GTTGCATTAACTAGAGCATACACTTC 58.597 38.462 0.00 0.00 36.80 3.01
2540 2989 6.316390 GGTTGCATTAACTAGAGCATACACTT 59.684 38.462 0.00 0.00 39.31 3.16
2541 2990 5.817816 GGTTGCATTAACTAGAGCATACACT 59.182 40.000 0.00 0.00 39.31 3.55
2542 2991 5.584649 TGGTTGCATTAACTAGAGCATACAC 59.415 40.000 0.00 0.00 39.31 2.90
2543 2992 5.739959 TGGTTGCATTAACTAGAGCATACA 58.260 37.500 0.00 0.00 39.31 2.29
2544 2993 6.677781 TTGGTTGCATTAACTAGAGCATAC 57.322 37.500 0.00 1.14 39.31 2.39
2545 2994 7.695480 TTTTGGTTGCATTAACTAGAGCATA 57.305 32.000 0.00 0.00 39.31 3.14
2546 2995 6.588719 TTTTGGTTGCATTAACTAGAGCAT 57.411 33.333 0.00 0.00 39.31 3.79
2547 2996 6.398234 TTTTTGGTTGCATTAACTAGAGCA 57.602 33.333 0.00 0.00 39.31 4.26
2567 3016 7.176589 AGTCTCTTCTATCAGATCGGTTTTT 57.823 36.000 0.00 0.00 0.00 1.94
2568 3017 6.783708 AGTCTCTTCTATCAGATCGGTTTT 57.216 37.500 0.00 0.00 0.00 2.43
2569 3018 6.488683 CCTAGTCTCTTCTATCAGATCGGTTT 59.511 42.308 0.00 0.00 0.00 3.27
2570 3019 6.001460 CCTAGTCTCTTCTATCAGATCGGTT 58.999 44.000 0.00 0.00 0.00 4.44
2571 3020 5.556915 CCTAGTCTCTTCTATCAGATCGGT 58.443 45.833 0.00 0.00 0.00 4.69
2572 3021 4.394920 GCCTAGTCTCTTCTATCAGATCGG 59.605 50.000 0.00 0.00 0.00 4.18
2573 3022 5.000591 TGCCTAGTCTCTTCTATCAGATCG 58.999 45.833 0.00 0.00 0.00 3.69
2574 3023 5.106157 GCTGCCTAGTCTCTTCTATCAGATC 60.106 48.000 0.00 0.00 0.00 2.75
2575 3024 4.766891 GCTGCCTAGTCTCTTCTATCAGAT 59.233 45.833 0.00 0.00 0.00 2.90
2576 3025 4.141287 GCTGCCTAGTCTCTTCTATCAGA 58.859 47.826 0.00 0.00 0.00 3.27
2577 3026 3.888323 TGCTGCCTAGTCTCTTCTATCAG 59.112 47.826 0.00 0.00 0.00 2.90
2578 3027 3.634448 GTGCTGCCTAGTCTCTTCTATCA 59.366 47.826 0.00 0.00 0.00 2.15
2579 3028 3.634448 TGTGCTGCCTAGTCTCTTCTATC 59.366 47.826 0.00 0.00 0.00 2.08
2580 3029 3.636679 TGTGCTGCCTAGTCTCTTCTAT 58.363 45.455 0.00 0.00 0.00 1.98
2581 3030 3.087370 TGTGCTGCCTAGTCTCTTCTA 57.913 47.619 0.00 0.00 0.00 2.10
2582 3031 1.930251 TGTGCTGCCTAGTCTCTTCT 58.070 50.000 0.00 0.00 0.00 2.85
2583 3032 2.977772 ATGTGCTGCCTAGTCTCTTC 57.022 50.000 0.00 0.00 0.00 2.87
2584 3033 3.772025 ACTAATGTGCTGCCTAGTCTCTT 59.228 43.478 0.00 0.00 0.00 2.85
2585 3034 3.370104 ACTAATGTGCTGCCTAGTCTCT 58.630 45.455 0.00 0.00 0.00 3.10
2586 3035 3.383185 AGACTAATGTGCTGCCTAGTCTC 59.617 47.826 17.75 3.60 44.61 3.36
2587 3036 3.370104 AGACTAATGTGCTGCCTAGTCT 58.630 45.455 17.75 17.75 43.60 3.24
2588 3037 3.810310 AGACTAATGTGCTGCCTAGTC 57.190 47.619 15.04 15.04 40.29 2.59
2589 3038 3.515502 TCAAGACTAATGTGCTGCCTAGT 59.484 43.478 0.00 0.00 0.00 2.57
2590 3039 4.128925 TCAAGACTAATGTGCTGCCTAG 57.871 45.455 0.00 0.00 0.00 3.02
2591 3040 4.020218 AGTTCAAGACTAATGTGCTGCCTA 60.020 41.667 0.00 0.00 36.65 3.93
2592 3041 3.077359 GTTCAAGACTAATGTGCTGCCT 58.923 45.455 0.00 0.00 0.00 4.75
2593 3042 3.077359 AGTTCAAGACTAATGTGCTGCC 58.923 45.455 0.00 0.00 36.65 4.85
2594 3043 4.756084 AAGTTCAAGACTAATGTGCTGC 57.244 40.909 0.00 0.00 37.72 5.25
2595 3044 7.658179 TCTTAAGTTCAAGACTAATGTGCTG 57.342 36.000 1.63 0.00 37.72 4.41
2606 3055 5.869579 AGCCAAGATGTCTTAAGTTCAAGA 58.130 37.500 1.63 0.00 34.28 3.02
2607 3056 5.936956 AGAGCCAAGATGTCTTAAGTTCAAG 59.063 40.000 1.63 0.00 34.28 3.02
2608 3057 5.869579 AGAGCCAAGATGTCTTAAGTTCAA 58.130 37.500 1.63 0.00 34.28 2.69
2609 3058 5.012046 TGAGAGCCAAGATGTCTTAAGTTCA 59.988 40.000 1.63 4.17 34.28 3.18
2610 3059 5.482908 TGAGAGCCAAGATGTCTTAAGTTC 58.517 41.667 1.63 0.00 34.28 3.01
2611 3060 5.489792 TGAGAGCCAAGATGTCTTAAGTT 57.510 39.130 1.63 0.00 34.28 2.66
2612 3061 5.690464 ATGAGAGCCAAGATGTCTTAAGT 57.310 39.130 1.63 0.00 34.28 2.24
2613 3062 5.988561 GGTATGAGAGCCAAGATGTCTTAAG 59.011 44.000 0.00 0.00 34.28 1.85
2614 3063 5.425217 TGGTATGAGAGCCAAGATGTCTTAA 59.575 40.000 0.00 0.00 34.28 1.85
2615 3064 4.962362 TGGTATGAGAGCCAAGATGTCTTA 59.038 41.667 0.00 0.00 34.28 2.10
2616 3065 3.776969 TGGTATGAGAGCCAAGATGTCTT 59.223 43.478 0.00 0.00 36.45 3.01
2617 3066 3.378512 TGGTATGAGAGCCAAGATGTCT 58.621 45.455 0.00 0.00 0.00 3.41
2618 3067 3.827008 TGGTATGAGAGCCAAGATGTC 57.173 47.619 0.00 0.00 0.00 3.06
2619 3068 3.746751 GCATGGTATGAGAGCCAAGATGT 60.747 47.826 0.00 0.00 38.38 3.06
2620 3069 2.812591 GCATGGTATGAGAGCCAAGATG 59.187 50.000 0.00 0.00 38.38 2.90
2621 3070 2.440627 TGCATGGTATGAGAGCCAAGAT 59.559 45.455 0.00 0.00 38.38 2.40
2622 3071 1.839354 TGCATGGTATGAGAGCCAAGA 59.161 47.619 0.00 0.00 38.38 3.02
2623 3072 2.158856 TCTGCATGGTATGAGAGCCAAG 60.159 50.000 0.00 0.00 38.38 3.61
2624 3073 1.839354 TCTGCATGGTATGAGAGCCAA 59.161 47.619 0.00 0.00 38.38 4.52
2625 3074 1.499368 TCTGCATGGTATGAGAGCCA 58.501 50.000 0.00 0.00 39.33 4.75
2626 3075 2.158842 ACTTCTGCATGGTATGAGAGCC 60.159 50.000 0.00 0.00 0.00 4.70
2627 3076 2.871022 CACTTCTGCATGGTATGAGAGC 59.129 50.000 0.00 0.00 0.00 4.09
2628 3077 2.871022 GCACTTCTGCATGGTATGAGAG 59.129 50.000 0.00 0.00 43.62 3.20
2629 3078 2.910199 GCACTTCTGCATGGTATGAGA 58.090 47.619 0.00 0.00 43.62 3.27
2640 3089 2.813754 TGGTTAGAACATGCACTTCTGC 59.186 45.455 15.71 9.78 44.52 4.26
2641 3090 5.396484 CATTGGTTAGAACATGCACTTCTG 58.604 41.667 15.71 1.45 0.00 3.02
2642 3091 4.082571 GCATTGGTTAGAACATGCACTTCT 60.083 41.667 12.06 12.06 37.89 2.85
2643 3092 4.168760 GCATTGGTTAGAACATGCACTTC 58.831 43.478 11.01 0.00 37.89 3.01
2644 3093 3.573538 TGCATTGGTTAGAACATGCACTT 59.426 39.130 13.47 0.00 40.89 3.16
2645 3094 3.156293 TGCATTGGTTAGAACATGCACT 58.844 40.909 13.47 0.00 40.89 4.40
2646 3095 3.574284 TGCATTGGTTAGAACATGCAC 57.426 42.857 13.47 0.00 40.89 4.57
2647 3096 3.305950 GGTTGCATTGGTTAGAACATGCA 60.306 43.478 13.47 13.47 42.74 3.96
2648 3097 3.253230 GGTTGCATTGGTTAGAACATGC 58.747 45.455 9.59 9.59 38.24 4.06
2649 3098 3.190327 TCGGTTGCATTGGTTAGAACATG 59.810 43.478 0.00 0.00 0.00 3.21
2650 3099 3.417101 TCGGTTGCATTGGTTAGAACAT 58.583 40.909 0.00 0.00 0.00 2.71
2651 3100 2.852449 TCGGTTGCATTGGTTAGAACA 58.148 42.857 0.00 0.00 0.00 3.18
2652 3101 3.907894 TTCGGTTGCATTGGTTAGAAC 57.092 42.857 0.00 0.00 0.00 3.01
2653 3102 4.023536 GTCTTTCGGTTGCATTGGTTAGAA 60.024 41.667 0.00 0.00 0.00 2.10
2654 3103 3.500680 GTCTTTCGGTTGCATTGGTTAGA 59.499 43.478 0.00 0.00 0.00 2.10
2655 3104 3.502211 AGTCTTTCGGTTGCATTGGTTAG 59.498 43.478 0.00 0.00 0.00 2.34
2656 3105 3.252215 CAGTCTTTCGGTTGCATTGGTTA 59.748 43.478 0.00 0.00 0.00 2.85
2657 3106 2.034558 CAGTCTTTCGGTTGCATTGGTT 59.965 45.455 0.00 0.00 0.00 3.67
2658 3107 1.608590 CAGTCTTTCGGTTGCATTGGT 59.391 47.619 0.00 0.00 0.00 3.67
2659 3108 1.879380 TCAGTCTTTCGGTTGCATTGG 59.121 47.619 0.00 0.00 0.00 3.16
2660 3109 3.438087 AGATCAGTCTTTCGGTTGCATTG 59.562 43.478 0.00 0.00 0.00 2.82
2661 3110 3.438087 CAGATCAGTCTTTCGGTTGCATT 59.562 43.478 0.00 0.00 30.42 3.56
2662 3111 3.005554 CAGATCAGTCTTTCGGTTGCAT 58.994 45.455 0.00 0.00 30.42 3.96
2663 3112 2.037121 TCAGATCAGTCTTTCGGTTGCA 59.963 45.455 0.00 0.00 30.42 4.08
2664 3113 2.688507 TCAGATCAGTCTTTCGGTTGC 58.311 47.619 0.00 0.00 30.42 4.17
2665 3114 4.498241 TCATCAGATCAGTCTTTCGGTTG 58.502 43.478 0.00 0.00 30.42 3.77
2666 3115 4.808414 TCATCAGATCAGTCTTTCGGTT 57.192 40.909 0.00 0.00 30.42 4.44
2667 3116 4.808414 TTCATCAGATCAGTCTTTCGGT 57.192 40.909 0.00 0.00 30.42 4.69
2668 3117 5.414360 TCTTTCATCAGATCAGTCTTTCGG 58.586 41.667 0.00 0.00 30.42 4.30
2669 3118 6.253298 GTCTCTTTCATCAGATCAGTCTTTCG 59.747 42.308 0.00 0.00 30.42 3.46
2670 3119 7.322664 AGTCTCTTTCATCAGATCAGTCTTTC 58.677 38.462 0.00 0.00 30.42 2.62
2671 3120 7.243604 AGTCTCTTTCATCAGATCAGTCTTT 57.756 36.000 0.00 0.00 30.42 2.52
2672 3121 6.855763 AGTCTCTTTCATCAGATCAGTCTT 57.144 37.500 0.00 0.00 30.42 3.01
2673 3122 6.547141 CCTAGTCTCTTTCATCAGATCAGTCT 59.453 42.308 0.00 0.00 34.14 3.24
2674 3123 6.321181 ACCTAGTCTCTTTCATCAGATCAGTC 59.679 42.308 0.00 0.00 0.00 3.51
2675 3124 6.194235 ACCTAGTCTCTTTCATCAGATCAGT 58.806 40.000 0.00 0.00 0.00 3.41
2676 3125 6.713762 ACCTAGTCTCTTTCATCAGATCAG 57.286 41.667 0.00 0.00 0.00 2.90
2677 3126 6.264292 GCTACCTAGTCTCTTTCATCAGATCA 59.736 42.308 0.00 0.00 0.00 2.92
2678 3127 6.264292 TGCTACCTAGTCTCTTTCATCAGATC 59.736 42.308 0.00 0.00 0.00 2.75
2679 3128 6.040391 GTGCTACCTAGTCTCTTTCATCAGAT 59.960 42.308 0.00 0.00 0.00 2.90
2680 3129 5.358442 GTGCTACCTAGTCTCTTTCATCAGA 59.642 44.000 0.00 0.00 0.00 3.27
2681 3130 5.126222 TGTGCTACCTAGTCTCTTTCATCAG 59.874 44.000 0.00 0.00 0.00 2.90
2682 3131 5.016831 TGTGCTACCTAGTCTCTTTCATCA 58.983 41.667 0.00 0.00 0.00 3.07
2683 3132 5.584253 TGTGCTACCTAGTCTCTTTCATC 57.416 43.478 0.00 0.00 0.00 2.92
2684 3133 6.552445 AATGTGCTACCTAGTCTCTTTCAT 57.448 37.500 0.00 0.00 0.00 2.57
2685 3134 7.661536 ATAATGTGCTACCTAGTCTCTTTCA 57.338 36.000 0.00 0.00 0.00 2.69
2686 3135 8.630917 TGTATAATGTGCTACCTAGTCTCTTTC 58.369 37.037 0.00 0.00 0.00 2.62
2687 3136 8.534954 TGTATAATGTGCTACCTAGTCTCTTT 57.465 34.615 0.00 0.00 0.00 2.52
2688 3137 8.713708 ATGTATAATGTGCTACCTAGTCTCTT 57.286 34.615 0.00 0.00 0.00 2.85
2689 3138 7.945109 TGATGTATAATGTGCTACCTAGTCTCT 59.055 37.037 0.00 0.00 0.00 3.10
2690 3139 8.112016 TGATGTATAATGTGCTACCTAGTCTC 57.888 38.462 0.00 0.00 0.00 3.36
2691 3140 8.361139 GTTGATGTATAATGTGCTACCTAGTCT 58.639 37.037 0.00 0.00 0.00 3.24
2692 3141 8.141909 TGTTGATGTATAATGTGCTACCTAGTC 58.858 37.037 0.00 0.00 0.00 2.59
2693 3142 8.018537 TGTTGATGTATAATGTGCTACCTAGT 57.981 34.615 0.00 0.00 0.00 2.57
2695 3144 9.923143 GTATGTTGATGTATAATGTGCTACCTA 57.077 33.333 0.00 0.00 0.00 3.08
2696 3145 8.651389 AGTATGTTGATGTATAATGTGCTACCT 58.349 33.333 0.00 0.00 0.00 3.08
2697 3146 8.833231 AGTATGTTGATGTATAATGTGCTACC 57.167 34.615 0.00 0.00 0.00 3.18
2700 3149 8.870116 TCCTAGTATGTTGATGTATAATGTGCT 58.130 33.333 0.00 0.00 0.00 4.40
2701 3150 8.926710 GTCCTAGTATGTTGATGTATAATGTGC 58.073 37.037 0.00 0.00 0.00 4.57
2702 3151 9.981114 TGTCCTAGTATGTTGATGTATAATGTG 57.019 33.333 0.00 0.00 0.00 3.21
2710 3159 9.770097 CTTGATTATGTCCTAGTATGTTGATGT 57.230 33.333 0.00 0.00 0.00 3.06
2711 3160 9.212641 CCTTGATTATGTCCTAGTATGTTGATG 57.787 37.037 0.00 0.00 0.00 3.07
2712 3161 9.159254 TCCTTGATTATGTCCTAGTATGTTGAT 57.841 33.333 0.00 0.00 0.00 2.57
2713 3162 8.547481 TCCTTGATTATGTCCTAGTATGTTGA 57.453 34.615 0.00 0.00 0.00 3.18
2714 3163 9.265901 CTTCCTTGATTATGTCCTAGTATGTTG 57.734 37.037 0.00 0.00 0.00 3.33
2715 3164 9.213777 TCTTCCTTGATTATGTCCTAGTATGTT 57.786 33.333 0.00 0.00 0.00 2.71
2716 3165 8.783660 TCTTCCTTGATTATGTCCTAGTATGT 57.216 34.615 0.00 0.00 0.00 2.29
2717 3166 9.083422 TCTCTTCCTTGATTATGTCCTAGTATG 57.917 37.037 0.00 0.00 0.00 2.39
2718 3167 9.836179 ATCTCTTCCTTGATTATGTCCTAGTAT 57.164 33.333 0.00 0.00 0.00 2.12
2719 3168 9.303116 GATCTCTTCCTTGATTATGTCCTAGTA 57.697 37.037 0.00 0.00 0.00 1.82
2720 3169 7.786943 TGATCTCTTCCTTGATTATGTCCTAGT 59.213 37.037 0.00 0.00 0.00 2.57
2721 3170 8.187913 TGATCTCTTCCTTGATTATGTCCTAG 57.812 38.462 0.00 0.00 0.00 3.02
2722 3171 8.733092 ATGATCTCTTCCTTGATTATGTCCTA 57.267 34.615 0.00 0.00 0.00 2.94
2723 3172 7.630005 ATGATCTCTTCCTTGATTATGTCCT 57.370 36.000 0.00 0.00 0.00 3.85
2724 3173 8.811017 TCTATGATCTCTTCCTTGATTATGTCC 58.189 37.037 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.