Multiple sequence alignment - TraesCS4A01G045300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G045300 chr4A 100.000 3828 0 0 1 3828 37305358 37309185 0.000000e+00 7070
1 TraesCS4A01G045300 chr4A 100.000 426 0 0 4075 4500 37309432 37309857 0.000000e+00 787
2 TraesCS4A01G045300 chr4A 81.229 293 19 10 1224 1484 665986204 665985916 2.120000e-48 204
3 TraesCS4A01G045300 chr4A 84.127 189 20 10 1508 1691 165815576 165815759 1.660000e-39 174
4 TraesCS4A01G045300 chr4A 83.249 197 25 8 1496 1687 611034819 611035012 1.660000e-39 174
5 TraesCS4A01G045300 chr4A 85.897 156 15 5 4243 4398 565304099 565304247 4.660000e-35 159
6 TraesCS4A01G045300 chr4B 97.736 1237 25 3 2568 3803 527003322 527002088 0.000000e+00 2126
7 TraesCS4A01G045300 chr4B 88.863 1302 68 24 270 1512 527005326 527004043 0.000000e+00 1530
8 TraesCS4A01G045300 chr4B 94.758 744 33 4 1669 2407 527004042 527003300 0.000000e+00 1153
9 TraesCS4A01G045300 chr4B 97.207 179 5 0 1 179 527005500 527005322 2.030000e-78 303
10 TraesCS4A01G045300 chr4B 85.397 315 16 9 4117 4425 526266510 526266800 2.630000e-77 300
11 TraesCS4A01G045300 chr4B 100.000 160 0 0 2408 2567 171146595 171146754 3.400000e-76 296
12 TraesCS4A01G045300 chr4B 82.253 293 21 15 1224 1486 365509285 365509576 1.630000e-54 224
13 TraesCS4A01G045300 chr4B 81.570 293 18 9 1224 1484 636234302 636234590 4.560000e-50 209
14 TraesCS4A01G045300 chr4B 97.030 101 3 0 175 275 107776873 107776973 2.150000e-38 171
15 TraesCS4A01G045300 chr4B 93.578 109 6 1 164 271 562739313 562739205 1.300000e-35 161
16 TraesCS4A01G045300 chr4D 97.119 1215 28 4 2568 3782 428964811 428963604 0.000000e+00 2043
17 TraesCS4A01G045300 chr4D 90.509 1296 53 24 270 1512 428966812 428965534 0.000000e+00 1648
18 TraesCS4A01G045300 chr4D 93.449 748 37 7 1669 2407 428965533 428964789 0.000000e+00 1099
19 TraesCS4A01G045300 chr4D 89.062 384 35 5 4121 4500 428950224 428949844 1.900000e-128 470
20 TraesCS4A01G045300 chr4D 94.475 181 7 3 1 179 428966987 428966808 4.430000e-70 276
21 TraesCS4A01G045300 chr4D 95.122 164 5 3 1509 1671 89424060 89423899 5.780000e-64 255
22 TraesCS4A01G045300 chr4D 92.398 171 9 4 1509 1678 437295765 437295932 1.620000e-59 241
23 TraesCS4A01G045300 chr4D 96.970 99 3 0 175 273 54412656 54412558 2.780000e-37 167
24 TraesCS4A01G045300 chr4D 93.519 108 5 1 164 271 457526178 457526283 4.660000e-35 159
25 TraesCS4A01G045300 chrUn 100.000 164 0 0 2408 2571 112608262 112608425 2.030000e-78 303
26 TraesCS4A01G045300 chr5B 95.745 188 4 3 2408 2595 548726927 548727110 2.630000e-77 300
27 TraesCS4A01G045300 chr5B 96.196 184 4 3 2408 2590 339629952 339629771 9.460000e-77 298
28 TraesCS4A01G045300 chr5B 88.462 156 15 1 1855 2007 652144969 652144814 7.690000e-43 185
29 TraesCS4A01G045300 chr5B 91.736 121 10 0 1876 1996 226583780 226583660 7.740000e-38 169
30 TraesCS4A01G045300 chr7B 98.256 172 0 2 2408 2578 220990632 220990801 9.460000e-77 298
31 TraesCS4A01G045300 chr7B 98.802 167 1 1 2401 2567 156950884 156951049 3.400000e-76 296
32 TraesCS4A01G045300 chr7B 90.710 183 14 3 1492 1673 401532544 401532724 1.620000e-59 241
33 TraesCS4A01G045300 chr7B 80.690 290 26 13 1224 1484 348044576 348044864 9.870000e-47 198
34 TraesCS4A01G045300 chr1A 98.802 167 2 0 2408 2574 50339330 50339496 9.460000e-77 298
35 TraesCS4A01G045300 chr1A 96.970 99 3 0 175 273 581215536 581215634 2.780000e-37 167
36 TraesCS4A01G045300 chr7A 98.246 171 0 2 2408 2578 555943670 555943837 3.400000e-76 296
37 TraesCS4A01G045300 chr7A 95.122 164 5 2 1509 1671 498937206 498937367 5.780000e-64 255
38 TraesCS4A01G045300 chr7A 91.803 183 12 3 1492 1673 451519989 451519809 7.470000e-63 252
39 TraesCS4A01G045300 chr7A 80.978 184 23 9 4241 4420 543778295 543778120 7.850000e-28 135
40 TraesCS4A01G045300 chr7A 86.047 129 15 1 1013 1141 552751696 552751571 7.850000e-28 135
41 TraesCS4A01G045300 chr2B 97.674 172 2 2 2408 2579 184124211 184124042 1.220000e-75 294
42 TraesCS4A01G045300 chr2B 80.887 293 20 9 1224 1484 576817104 576817392 9.870000e-47 198
43 TraesCS4A01G045300 chr3B 84.590 305 33 4 1091 1382 10487227 10486924 1.580000e-74 291
44 TraesCS4A01G045300 chr3B 88.837 215 19 2 1793 2002 10486880 10486666 4.470000e-65 259
45 TraesCS4A01G045300 chr3B 82.594 293 15 12 1224 1484 755583252 755583540 4.530000e-55 226
46 TraesCS4A01G045300 chr3B 84.375 160 18 4 4238 4397 245935461 245935613 2.800000e-32 150
47 TraesCS4A01G045300 chr6D 94.675 169 5 4 1506 1673 431160665 431160830 4.470000e-65 259
48 TraesCS4A01G045300 chr6D 93.529 170 7 4 1508 1676 145462625 145462459 2.690000e-62 250
49 TraesCS4A01G045300 chr6D 82.594 293 15 15 1224 1484 83695017 83694729 4.530000e-55 226
50 TraesCS4A01G045300 chr5A 95.181 166 5 2 1509 1673 320214244 320214407 4.470000e-65 259
51 TraesCS4A01G045300 chr5A 90.110 182 14 4 1509 1689 48469041 48469219 2.710000e-57 233
52 TraesCS4A01G045300 chr5A 82.222 180 19 9 4238 4414 290387290 290387459 4.690000e-30 143
53 TraesCS4A01G045300 chr7D 91.803 183 12 3 1492 1673 397554899 397555079 7.470000e-63 252
54 TraesCS4A01G045300 chr7D 85.714 161 16 5 4237 4397 623793432 623793585 3.600000e-36 163
55 TraesCS4A01G045300 chr7D 84.810 158 17 3 4240 4397 156796841 156796991 7.800000e-33 152
56 TraesCS4A01G045300 chr5D 89.231 195 17 4 1509 1701 59947682 59947874 1.620000e-59 241
57 TraesCS4A01G045300 chr6B 82.253 293 16 10 1224 1484 697572910 697573198 2.110000e-53 220
58 TraesCS4A01G045300 chr6B 82.253 293 16 10 1224 1484 697596930 697597218 2.110000e-53 220
59 TraesCS4A01G045300 chr6B 80.887 293 20 6 1224 1484 648563871 648563583 9.870000e-47 198
60 TraesCS4A01G045300 chr1B 87.766 188 15 8 1508 1692 500268465 500268647 3.530000e-51 213
61 TraesCS4A01G045300 chr1B 81.570 293 18 9 1224 1484 103074305 103074017 4.560000e-50 209
62 TraesCS4A01G045300 chr1B 87.363 182 16 6 1509 1688 533986739 533986915 7.630000e-48 202
63 TraesCS4A01G045300 chr1B 97.938 97 2 0 175 271 612866162 612866258 7.740000e-38 169
64 TraesCS4A01G045300 chr1B 96.040 101 4 0 171 271 322747517 322747417 1.000000e-36 165
65 TraesCS4A01G045300 chr2D 86.885 183 20 4 1509 1689 638164295 638164475 7.630000e-48 202
66 TraesCS4A01G045300 chr2D 86.335 161 13 7 4238 4397 406958564 406958412 2.780000e-37 167
67 TraesCS4A01G045300 chr2D 92.920 113 4 4 162 271 166808345 166808234 1.300000e-35 161
68 TraesCS4A01G045300 chr3A 89.172 157 17 0 1851 2007 6164046 6163890 3.550000e-46 196
69 TraesCS4A01G045300 chr2A 83.333 186 25 5 1509 1690 580601 580418 2.780000e-37 167
70 TraesCS4A01G045300 chr3D 94.340 106 6 0 167 272 19269822 19269717 3.600000e-36 163


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G045300 chr4A 37305358 37309857 4499 False 3928.5 7070 100.0000 1 4500 2 chr4A.!!$F4 4499
1 TraesCS4A01G045300 chr4B 527002088 527005500 3412 True 1278.0 2126 94.6410 1 3803 4 chr4B.!!$R2 3802
2 TraesCS4A01G045300 chr4D 428963604 428966987 3383 True 1266.5 2043 93.8880 1 3782 4 chr4D.!!$R4 3781
3 TraesCS4A01G045300 chr3B 10486666 10487227 561 True 275.0 291 86.7135 1091 2002 2 chr3B.!!$R1 911

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
106 108 0.107017 ACCGGATCCTCAAATGGCAG 60.107 55.0 9.46 0.0 0.00 4.85 F
893 924 0.442699 GGTCGGTGCGAAACAGATTC 59.557 55.0 0.00 0.0 37.72 2.52 F
2438 2547 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.0 0.00 0.0 34.10 3.16 F
2483 2592 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.0 7.38 0.0 33.79 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1248 1288 0.384353 GCGAACGTGGAAAGCAAGAC 60.384 55.0 0.00 0.0 0.00 3.01 R
2464 2573 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.0 8.73 0.0 40.08 4.58 R
3457 3566 0.179037 ATGATCCACCATCACTGCCG 60.179 55.0 0.00 0.0 44.70 5.69 R
4080 4190 0.383949 GCACCGTGCTTTTTCTTGGA 59.616 50.0 16.51 0.0 40.96 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 47 5.983540 AGTTATCCAAGAAGCAACTCCTAG 58.016 41.667 0.00 0.00 0.00 3.02
106 108 0.107017 ACCGGATCCTCAAATGGCAG 60.107 55.000 9.46 0.00 0.00 4.85
174 176 7.800300 AGAAGAGGGATTGACTTTACTTACT 57.200 36.000 0.00 0.00 0.00 2.24
175 177 8.896722 AGAAGAGGGATTGACTTTACTTACTA 57.103 34.615 0.00 0.00 0.00 1.82
176 178 8.751242 AGAAGAGGGATTGACTTTACTTACTAC 58.249 37.037 0.00 0.00 0.00 2.73
177 179 8.667592 AAGAGGGATTGACTTTACTTACTACT 57.332 34.615 0.00 0.00 0.00 2.57
178 180 8.296211 AGAGGGATTGACTTTACTTACTACTC 57.704 38.462 0.00 0.00 0.00 2.59
179 181 7.342541 AGAGGGATTGACTTTACTTACTACTCC 59.657 40.741 0.00 0.00 0.00 3.85
180 182 6.383436 AGGGATTGACTTTACTTACTACTCCC 59.617 42.308 0.00 0.00 38.15 4.30
181 183 6.383436 GGGATTGACTTTACTTACTACTCCCT 59.617 42.308 0.00 0.00 35.59 4.20
182 184 7.417683 GGGATTGACTTTACTTACTACTCCCTC 60.418 44.444 0.00 0.00 35.59 4.30
183 185 6.847421 TTGACTTTACTTACTACTCCCTCC 57.153 41.667 0.00 0.00 0.00 4.30
184 186 4.946157 TGACTTTACTTACTACTCCCTCCG 59.054 45.833 0.00 0.00 0.00 4.63
185 187 4.928263 ACTTTACTTACTACTCCCTCCGT 58.072 43.478 0.00 0.00 0.00 4.69
186 188 5.328565 ACTTTACTTACTACTCCCTCCGTT 58.671 41.667 0.00 0.00 0.00 4.44
187 189 5.417266 ACTTTACTTACTACTCCCTCCGTTC 59.583 44.000 0.00 0.00 0.00 3.95
188 190 2.732763 ACTTACTACTCCCTCCGTTCC 58.267 52.381 0.00 0.00 0.00 3.62
189 191 2.042162 ACTTACTACTCCCTCCGTTCCA 59.958 50.000 0.00 0.00 0.00 3.53
190 192 2.905415 TACTACTCCCTCCGTTCCAA 57.095 50.000 0.00 0.00 0.00 3.53
191 193 2.249309 ACTACTCCCTCCGTTCCAAT 57.751 50.000 0.00 0.00 0.00 3.16
192 194 3.393426 ACTACTCCCTCCGTTCCAATA 57.607 47.619 0.00 0.00 0.00 1.90
193 195 3.924922 ACTACTCCCTCCGTTCCAATAT 58.075 45.455 0.00 0.00 0.00 1.28
194 196 5.070823 ACTACTCCCTCCGTTCCAATATA 57.929 43.478 0.00 0.00 0.00 0.86
195 197 5.078256 ACTACTCCCTCCGTTCCAATATAG 58.922 45.833 0.00 0.00 0.00 1.31
196 198 4.194678 ACTCCCTCCGTTCCAATATAGA 57.805 45.455 0.00 0.00 0.00 1.98
197 199 4.753186 ACTCCCTCCGTTCCAATATAGAT 58.247 43.478 0.00 0.00 0.00 1.98
198 200 4.528596 ACTCCCTCCGTTCCAATATAGATG 59.471 45.833 0.00 0.00 0.00 2.90
199 201 4.747583 TCCCTCCGTTCCAATATAGATGA 58.252 43.478 0.00 0.00 0.00 2.92
200 202 4.527038 TCCCTCCGTTCCAATATAGATGAC 59.473 45.833 0.00 0.00 0.00 3.06
201 203 4.322801 CCCTCCGTTCCAATATAGATGACC 60.323 50.000 0.00 0.00 0.00 4.02
202 204 4.322801 CCTCCGTTCCAATATAGATGACCC 60.323 50.000 0.00 0.00 0.00 4.46
203 205 4.228010 TCCGTTCCAATATAGATGACCCA 58.772 43.478 0.00 0.00 0.00 4.51
204 206 4.656575 TCCGTTCCAATATAGATGACCCAA 59.343 41.667 0.00 0.00 0.00 4.12
205 207 5.131308 TCCGTTCCAATATAGATGACCCAAA 59.869 40.000 0.00 0.00 0.00 3.28
206 208 6.003950 CCGTTCCAATATAGATGACCCAAAT 58.996 40.000 0.00 0.00 0.00 2.32
207 209 6.490040 CCGTTCCAATATAGATGACCCAAATT 59.510 38.462 0.00 0.00 0.00 1.82
208 210 7.014230 CCGTTCCAATATAGATGACCCAAATTT 59.986 37.037 0.00 0.00 0.00 1.82
209 211 7.862372 CGTTCCAATATAGATGACCCAAATTTG 59.138 37.037 11.40 11.40 0.00 2.32
210 212 8.695456 GTTCCAATATAGATGACCCAAATTTGT 58.305 33.333 16.73 0.00 0.00 2.83
211 213 9.928618 TTCCAATATAGATGACCCAAATTTGTA 57.071 29.630 16.73 1.57 0.00 2.41
212 214 9.349713 TCCAATATAGATGACCCAAATTTGTAC 57.650 33.333 16.73 8.17 0.00 2.90
213 215 9.354673 CCAATATAGATGACCCAAATTTGTACT 57.645 33.333 16.73 8.68 0.00 2.73
218 220 9.975218 ATAGATGACCCAAATTTGTACTAACTT 57.025 29.630 16.73 0.00 0.00 2.66
219 221 8.706322 AGATGACCCAAATTTGTACTAACTTT 57.294 30.769 16.73 0.00 0.00 2.66
220 222 9.802039 AGATGACCCAAATTTGTACTAACTTTA 57.198 29.630 16.73 0.00 0.00 1.85
222 224 8.983702 TGACCCAAATTTGTACTAACTTTAGT 57.016 30.769 16.73 6.85 45.39 2.24
246 248 9.310716 AGTACAAAGTTAGTACAAAGTTGAGTC 57.689 33.333 6.30 0.00 43.24 3.36
247 249 9.090692 GTACAAAGTTAGTACAAAGTTGAGTCA 57.909 33.333 0.00 0.00 41.08 3.41
248 250 8.732746 ACAAAGTTAGTACAAAGTTGAGTCAT 57.267 30.769 0.00 0.00 0.00 3.06
249 251 8.827677 ACAAAGTTAGTACAAAGTTGAGTCATC 58.172 33.333 0.00 0.00 0.00 2.92
250 252 9.046296 CAAAGTTAGTACAAAGTTGAGTCATCT 57.954 33.333 0.00 0.00 0.00 2.90
257 259 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
258 260 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
259 261 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
260 262 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
261 263 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
262 264 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
263 265 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
264 266 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
265 267 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
266 268 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
267 269 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
268 270 3.906720 TCTATTTTGGAACGGAGGGAG 57.093 47.619 0.00 0.00 0.00 4.30
300 302 6.765989 ACTGCTAATGTGGCTAAATTCGAATA 59.234 34.615 11.83 0.00 0.00 1.75
383 385 6.688073 ACTAGCTTAACTGGTGGCATATAT 57.312 37.500 0.00 0.00 38.91 0.86
384 386 7.792364 ACTAGCTTAACTGGTGGCATATATA 57.208 36.000 0.00 0.00 38.91 0.86
391 393 4.973168 ACTGGTGGCATATATACCAACTG 58.027 43.478 20.10 20.10 44.42 3.16
395 397 6.609876 TGGTGGCATATATACCAACTGAAAT 58.390 36.000 18.92 0.00 44.42 2.17
462 465 3.452474 CTCAAGCTCTCCGAAATTCGAT 58.548 45.455 17.75 0.00 43.74 3.59
515 518 1.138247 GCAGGCAAATCTTCCAGCG 59.862 57.895 0.00 0.00 0.00 5.18
623 626 3.551496 CTCCCTGTTCTTGGCGCCA 62.551 63.158 29.03 29.03 0.00 5.69
701 704 2.068834 TCTTCCCCATCTCCGACTAC 57.931 55.000 0.00 0.00 0.00 2.73
706 709 1.077334 CCCCATCTCCGACTACCCTAT 59.923 57.143 0.00 0.00 0.00 2.57
829 833 3.199289 GTCGGGGAAAGAGAAGGGAATAA 59.801 47.826 0.00 0.00 0.00 1.40
890 921 2.029964 GGGTCGGTGCGAAACAGA 59.970 61.111 0.00 0.00 37.72 3.41
893 924 0.442699 GGTCGGTGCGAAACAGATTC 59.557 55.000 0.00 0.00 37.72 2.52
947 978 0.662374 CCAAAAGCAGAGCGCAAGTG 60.662 55.000 11.47 4.51 46.13 3.16
948 979 1.008079 AAAAGCAGAGCGCAAGTGC 60.008 52.632 17.89 17.89 46.13 4.40
983 1014 3.805307 CCGAGCGAGCTGAGTCGT 61.805 66.667 0.84 0.00 42.17 4.34
984 1015 2.276994 CGAGCGAGCTGAGTCGTC 60.277 66.667 0.84 0.00 42.17 4.20
985 1016 2.276994 GAGCGAGCTGAGTCGTCG 60.277 66.667 0.84 5.28 42.17 5.12
997 1028 2.277310 TCGTCGATTCGAGCAGCG 60.277 61.111 9.42 9.57 36.23 5.18
1248 1288 3.005554 CAAGCTGTACCAGATCAAGGTG 58.994 50.000 17.38 4.91 40.26 4.00
1312 1384 5.106634 GCTGCATAATATTCTTCTGCTCCTG 60.107 44.000 0.00 0.00 34.02 3.86
1352 1424 1.474077 GCTCATTGGTTGACATGGTCC 59.526 52.381 0.00 0.00 0.00 4.46
1382 1454 1.516161 TGTGCTGATTCAGTGCTGTC 58.484 50.000 14.90 0.00 33.43 3.51
1409 1504 6.376299 TCAAAGCTTGATGCATACTTCATTCT 59.624 34.615 0.00 0.00 45.94 2.40
1421 1516 2.982488 ACTTCATTCTTCCTGTGGTCCT 59.018 45.455 0.00 0.00 0.00 3.85
1466 1561 3.170717 TCACTCGGATTAGTCTGGGTTT 58.829 45.455 0.00 0.00 41.82 3.27
1473 1568 4.989168 CGGATTAGTCTGGGTTTACATAGC 59.011 45.833 0.00 0.00 0.00 2.97
1512 1609 4.325472 GCTGCATTTGCTTCAATTGTACTC 59.675 41.667 5.13 0.00 42.66 2.59
1513 1610 4.808558 TGCATTTGCTTCAATTGTACTCC 58.191 39.130 5.13 0.00 42.66 3.85
1514 1611 4.176271 GCATTTGCTTCAATTGTACTCCC 58.824 43.478 5.13 0.00 38.21 4.30
1515 1612 4.082026 GCATTTGCTTCAATTGTACTCCCT 60.082 41.667 5.13 0.00 38.21 4.20
1516 1613 5.644644 CATTTGCTTCAATTGTACTCCCTC 58.355 41.667 5.13 0.00 0.00 4.30
1517 1614 3.350219 TGCTTCAATTGTACTCCCTCC 57.650 47.619 5.13 0.00 0.00 4.30
1518 1615 2.280628 GCTTCAATTGTACTCCCTCCG 58.719 52.381 5.13 0.00 0.00 4.63
1519 1616 2.354805 GCTTCAATTGTACTCCCTCCGT 60.355 50.000 5.13 0.00 0.00 4.69
1520 1617 3.868754 GCTTCAATTGTACTCCCTCCGTT 60.869 47.826 5.13 0.00 0.00 4.44
1521 1618 3.604875 TCAATTGTACTCCCTCCGTTC 57.395 47.619 5.13 0.00 0.00 3.95
1522 1619 2.235402 TCAATTGTACTCCCTCCGTTCC 59.765 50.000 5.13 0.00 0.00 3.62
1523 1620 2.236395 CAATTGTACTCCCTCCGTTCCT 59.764 50.000 0.00 0.00 0.00 3.36
1524 1621 2.905415 TTGTACTCCCTCCGTTCCTA 57.095 50.000 0.00 0.00 0.00 2.94
1525 1622 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
1526 1623 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
1527 1624 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
1528 1625 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
1529 1626 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
1530 1627 6.613699 TGTACTCCCTCCGTTCCTAAATATA 58.386 40.000 0.00 0.00 0.00 0.86
1531 1628 7.068702 TGTACTCCCTCCGTTCCTAAATATAA 58.931 38.462 0.00 0.00 0.00 0.98
1532 1629 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1533 1630 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1534 1631 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1535 1632 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1536 1633 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1537 1634 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1538 1635 7.991460 CCCTCCGTTCCTAAATATAAGTCTTTT 59.009 37.037 0.00 0.00 0.00 2.27
1539 1636 9.392259 CCTCCGTTCCTAAATATAAGTCTTTTT 57.608 33.333 0.00 0.00 0.00 1.94
1568 1665 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
1569 1666 4.219944 TCCAATATGGACTACATACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
1570 1667 4.021456 CCAATATGGACTACATACGGAGCA 60.021 45.833 0.00 0.00 44.41 4.26
1571 1668 5.510690 CCAATATGGACTACATACGGAGCAA 60.511 44.000 0.00 0.00 44.41 3.91
1572 1669 5.801531 ATATGGACTACATACGGAGCAAA 57.198 39.130 0.00 0.00 44.41 3.68
1573 1670 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
1574 1671 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
1575 1672 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
1576 1673 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
1577 1674 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
1578 1675 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1579 1676 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1580 1677 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1581 1678 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1582 1679 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1583 1680 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1584 1681 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1585 1682 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1586 1683 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1587 1684 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
1588 1685 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
1602 1699 8.958506 AGTGAATCTACACTCTAAAATACGTCT 58.041 33.333 0.00 0.00 46.36 4.18
1630 1727 6.971726 ACATCCGTATGTAGTTCCTATTGA 57.028 37.500 0.00 0.00 44.66 2.57
1631 1728 7.356089 ACATCCGTATGTAGTTCCTATTGAA 57.644 36.000 0.00 0.00 44.66 2.69
1632 1729 7.788026 ACATCCGTATGTAGTTCCTATTGAAA 58.212 34.615 0.00 0.00 44.66 2.69
1633 1730 8.429641 ACATCCGTATGTAGTTCCTATTGAAAT 58.570 33.333 0.00 0.00 44.66 2.17
1634 1731 8.926710 CATCCGTATGTAGTTCCTATTGAAATC 58.073 37.037 0.00 0.00 33.94 2.17
1635 1732 8.246430 TCCGTATGTAGTTCCTATTGAAATCT 57.754 34.615 0.00 0.00 33.94 2.40
1636 1733 8.358148 TCCGTATGTAGTTCCTATTGAAATCTC 58.642 37.037 0.00 0.00 33.94 2.75
1637 1734 8.361139 CCGTATGTAGTTCCTATTGAAATCTCT 58.639 37.037 0.00 0.00 33.94 3.10
1645 1742 9.674068 AGTTCCTATTGAAATCTCTAAAAGGAC 57.326 33.333 0.00 0.00 33.94 3.85
1646 1743 9.674068 GTTCCTATTGAAATCTCTAAAAGGACT 57.326 33.333 0.00 0.00 33.94 3.85
1659 1756 9.635520 TCTCTAAAAGGACTTACATTTAGAACG 57.364 33.333 7.86 0.00 41.34 3.95
1660 1757 9.635520 CTCTAAAAGGACTTACATTTAGAACGA 57.364 33.333 7.86 0.00 41.34 3.85
1661 1758 9.635520 TCTAAAAGGACTTACATTTAGAACGAG 57.364 33.333 4.78 0.00 39.89 4.18
1662 1759 7.668525 AAAAGGACTTACATTTAGAACGAGG 57.331 36.000 0.00 0.00 32.10 4.63
1663 1760 6.600882 AAGGACTTACATTTAGAACGAGGA 57.399 37.500 0.00 0.00 0.00 3.71
1664 1761 6.210287 AGGACTTACATTTAGAACGAGGAG 57.790 41.667 0.00 0.00 0.00 3.69
1665 1762 5.127356 AGGACTTACATTTAGAACGAGGAGG 59.873 44.000 0.00 0.00 0.00 4.30
1666 1763 5.340439 ACTTACATTTAGAACGAGGAGGG 57.660 43.478 0.00 0.00 0.00 4.30
1667 1764 5.021458 ACTTACATTTAGAACGAGGAGGGA 58.979 41.667 0.00 0.00 0.00 4.20
1672 1769 6.371278 ACATTTAGAACGAGGAGGGAGTATA 58.629 40.000 0.00 0.00 0.00 1.47
1681 1778 3.759618 GAGGAGGGAGTATATTCGAGTGG 59.240 52.174 0.00 0.00 0.00 4.00
1714 1811 1.119684 TACCAGCGGATGCACATACT 58.880 50.000 0.00 0.00 46.23 2.12
1723 1820 4.560128 CGGATGCACATACTTAGCTACAT 58.440 43.478 0.00 0.00 0.00 2.29
1747 1844 0.806492 GCAGAGTAGCTACGGTTGGC 60.806 60.000 17.99 14.09 0.00 4.52
1764 1861 4.195416 GTTGGCAAATTGAGAAAACCCAA 58.805 39.130 0.00 0.00 0.00 4.12
1791 1888 3.981071 TCACCCCATAGACTGAAGTTG 57.019 47.619 0.00 0.00 0.00 3.16
1944 2051 5.050567 GTCAGTACCCAGTAAAAACGAACTG 60.051 44.000 0.00 0.00 42.25 3.16
2010 2118 5.619132 ATCCAATTCCCCTTATTGCTTTG 57.381 39.130 0.00 0.00 32.82 2.77
2037 2145 1.138859 TGGTAGATGCTCCGTTCCATG 59.861 52.381 0.00 0.00 0.00 3.66
2051 2159 8.185505 GCTCCGTTCCATGTGTTAAATAATTTA 58.814 33.333 0.00 0.00 0.00 1.40
2072 2180 2.040988 TGGGCCTCCGGATCATCA 60.041 61.111 3.57 0.00 35.24 3.07
2083 2191 6.109359 CCTCCGGATCATCATATTAGTTTCC 58.891 44.000 3.57 0.00 0.00 3.13
2098 2206 1.129917 TTTCCGTTGGTACCTGTCCA 58.870 50.000 14.36 0.00 0.00 4.02
2131 2239 4.611310 AAGTTCATCACTTGCATGATCG 57.389 40.909 6.60 0.88 44.70 3.69
2216 2324 5.804639 TGTACTGTTTACTTGCATGATCCT 58.195 37.500 6.60 0.00 0.00 3.24
2319 2427 0.326264 ACCATTCAGACCTGCCAGTC 59.674 55.000 0.00 0.00 37.01 3.51
2395 2504 3.795688 TTTCTCTGCCCTTCATTCAGT 57.204 42.857 0.00 0.00 0.00 3.41
2396 2505 3.795688 TTCTCTGCCCTTCATTCAGTT 57.204 42.857 0.00 0.00 0.00 3.16
2397 2506 3.063510 TCTCTGCCCTTCATTCAGTTG 57.936 47.619 0.00 0.00 0.00 3.16
2398 2507 2.373169 TCTCTGCCCTTCATTCAGTTGT 59.627 45.455 0.00 0.00 0.00 3.32
2399 2508 3.152341 CTCTGCCCTTCATTCAGTTGTT 58.848 45.455 0.00 0.00 0.00 2.83
2400 2509 3.149196 TCTGCCCTTCATTCAGTTGTTC 58.851 45.455 0.00 0.00 0.00 3.18
2401 2510 3.152341 CTGCCCTTCATTCAGTTGTTCT 58.848 45.455 0.00 0.00 0.00 3.01
2402 2511 3.565307 TGCCCTTCATTCAGTTGTTCTT 58.435 40.909 0.00 0.00 0.00 2.52
2403 2512 3.569701 TGCCCTTCATTCAGTTGTTCTTC 59.430 43.478 0.00 0.00 0.00 2.87
2404 2513 3.823304 GCCCTTCATTCAGTTGTTCTTCT 59.177 43.478 0.00 0.00 0.00 2.85
2405 2514 4.320788 GCCCTTCATTCAGTTGTTCTTCTG 60.321 45.833 0.00 0.00 0.00 3.02
2406 2515 4.823989 CCCTTCATTCAGTTGTTCTTCTGT 59.176 41.667 0.00 0.00 33.89 3.41
2407 2516 5.278169 CCCTTCATTCAGTTGTTCTTCTGTG 60.278 44.000 0.00 0.00 33.89 3.66
2408 2517 4.818534 TCATTCAGTTGTTCTTCTGTGC 57.181 40.909 0.00 0.00 33.89 4.57
2409 2518 3.565482 TCATTCAGTTGTTCTTCTGTGCC 59.435 43.478 0.00 0.00 33.89 5.01
2410 2519 3.281727 TTCAGTTGTTCTTCTGTGCCT 57.718 42.857 0.00 0.00 33.89 4.75
2411 2520 2.564771 TCAGTTGTTCTTCTGTGCCTG 58.435 47.619 0.00 0.00 33.89 4.85
2412 2521 1.605710 CAGTTGTTCTTCTGTGCCTGG 59.394 52.381 0.00 0.00 0.00 4.45
2413 2522 0.312102 GTTGTTCTTCTGTGCCTGGC 59.688 55.000 12.87 12.87 0.00 4.85
2414 2523 1.165907 TTGTTCTTCTGTGCCTGGCG 61.166 55.000 14.98 0.00 0.00 5.69
2415 2524 2.669569 TTCTTCTGTGCCTGGCGC 60.670 61.111 24.80 24.80 39.75 6.53
2425 2534 3.052082 CCTGGCGCAGTGGTGAAG 61.052 66.667 10.83 0.00 0.00 3.02
2426 2535 2.281070 CTGGCGCAGTGGTGAAGT 60.281 61.111 10.83 0.00 0.00 3.01
2427 2536 2.280797 TGGCGCAGTGGTGAAGTC 60.281 61.111 10.83 0.00 0.00 3.01
2428 2537 3.050275 GGCGCAGTGGTGAAGTCC 61.050 66.667 10.83 0.00 0.00 3.85
2429 2538 2.031163 GCGCAGTGGTGAAGTCCT 59.969 61.111 0.30 0.00 0.00 3.85
2430 2539 2.029844 GCGCAGTGGTGAAGTCCTC 61.030 63.158 0.30 0.00 0.00 3.71
2431 2540 1.374758 CGCAGTGGTGAAGTCCTCC 60.375 63.158 0.00 0.00 0.00 4.30
2432 2541 1.003233 GCAGTGGTGAAGTCCTCCC 60.003 63.158 0.00 0.00 0.00 4.30
2433 2542 1.679898 CAGTGGTGAAGTCCTCCCC 59.320 63.158 0.00 0.00 0.00 4.81
2434 2543 1.127567 CAGTGGTGAAGTCCTCCCCA 61.128 60.000 0.00 0.00 0.00 4.96
2435 2544 1.128188 AGTGGTGAAGTCCTCCCCAC 61.128 60.000 0.00 0.00 44.69 4.61
2436 2545 1.128188 GTGGTGAAGTCCTCCCCACT 61.128 60.000 0.00 0.00 41.83 4.00
2437 2546 0.401395 TGGTGAAGTCCTCCCCACTT 60.401 55.000 0.00 0.00 36.77 3.16
2438 2547 0.036875 GGTGAAGTCCTCCCCACTTG 59.963 60.000 0.00 0.00 34.10 3.16
2439 2548 0.765510 GTGAAGTCCTCCCCACTTGT 59.234 55.000 0.00 0.00 34.10 3.16
2440 2549 0.764890 TGAAGTCCTCCCCACTTGTG 59.235 55.000 0.00 0.00 34.10 3.33
2441 2550 0.606673 GAAGTCCTCCCCACTTGTGC 60.607 60.000 0.00 0.00 34.10 4.57
2442 2551 2.034221 GTCCTCCCCACTTGTGCC 59.966 66.667 0.00 0.00 0.00 5.01
2443 2552 2.449518 TCCTCCCCACTTGTGCCA 60.450 61.111 0.00 0.00 0.00 4.92
2444 2553 2.081787 TCCTCCCCACTTGTGCCAA 61.082 57.895 0.00 0.00 0.00 4.52
2445 2554 1.604593 CCTCCCCACTTGTGCCAAG 60.605 63.158 11.87 11.87 0.00 3.61
2446 2555 1.455849 CTCCCCACTTGTGCCAAGA 59.544 57.895 18.22 0.00 0.00 3.02
2447 2556 0.607489 CTCCCCACTTGTGCCAAGAG 60.607 60.000 18.22 11.85 0.00 2.85
2448 2557 1.604593 CCCCACTTGTGCCAAGAGG 60.605 63.158 18.22 18.17 38.23 3.69
2449 2558 1.151450 CCCACTTGTGCCAAGAGGT 59.849 57.895 21.11 2.99 37.19 3.85
2450 2559 0.890996 CCCACTTGTGCCAAGAGGTC 60.891 60.000 21.11 0.00 37.19 3.85
2451 2560 0.890996 CCACTTGTGCCAAGAGGTCC 60.891 60.000 18.22 0.00 37.19 4.46
2452 2561 0.109342 CACTTGTGCCAAGAGGTCCT 59.891 55.000 18.22 0.00 37.19 3.85
2453 2562 0.109342 ACTTGTGCCAAGAGGTCCTG 59.891 55.000 18.22 0.00 37.19 3.86
2454 2563 0.607489 CTTGTGCCAAGAGGTCCTGG 60.607 60.000 0.00 0.00 37.19 4.45
2455 2564 2.067932 TTGTGCCAAGAGGTCCTGGG 62.068 60.000 0.00 0.00 39.14 4.45
2456 2565 2.121963 TGCCAAGAGGTCCTGGGT 60.122 61.111 0.00 0.00 38.32 4.51
2457 2566 1.774217 TGCCAAGAGGTCCTGGGTT 60.774 57.895 0.00 0.00 38.32 4.11
2458 2567 1.002011 GCCAAGAGGTCCTGGGTTC 60.002 63.158 0.00 0.00 38.32 3.62
2459 2568 1.296715 CCAAGAGGTCCTGGGTTCG 59.703 63.158 0.00 0.00 30.82 3.95
2460 2569 1.192146 CCAAGAGGTCCTGGGTTCGA 61.192 60.000 0.00 0.00 30.82 3.71
2461 2570 0.685097 CAAGAGGTCCTGGGTTCGAA 59.315 55.000 0.00 0.00 0.00 3.71
2462 2571 0.685660 AAGAGGTCCTGGGTTCGAAC 59.314 55.000 20.14 20.14 0.00 3.95
2473 2582 3.129792 GTTCGAACCAGCCTCTCTG 57.870 57.895 17.68 0.00 42.49 3.35
2474 2583 1.016653 GTTCGAACCAGCCTCTCTGC 61.017 60.000 17.68 0.00 41.50 4.26
2475 2584 1.471829 TTCGAACCAGCCTCTCTGCA 61.472 55.000 0.00 0.00 41.50 4.41
2476 2585 1.220206 CGAACCAGCCTCTCTGCAT 59.780 57.895 0.00 0.00 41.50 3.96
2477 2586 0.392193 CGAACCAGCCTCTCTGCATT 60.392 55.000 0.00 0.00 41.50 3.56
2478 2587 1.093159 GAACCAGCCTCTCTGCATTG 58.907 55.000 0.00 0.00 41.50 2.82
2479 2588 0.964358 AACCAGCCTCTCTGCATTGC 60.964 55.000 0.46 0.46 41.50 3.56
2480 2589 1.378119 CCAGCCTCTCTGCATTGCA 60.378 57.895 11.50 11.50 41.50 4.08
2481 2590 1.654954 CCAGCCTCTCTGCATTGCAC 61.655 60.000 7.38 0.00 41.50 4.57
2482 2591 0.677098 CAGCCTCTCTGCATTGCACT 60.677 55.000 7.38 0.00 35.78 4.40
2483 2592 0.037877 AGCCTCTCTGCATTGCACTT 59.962 50.000 7.38 0.00 33.79 3.16
2484 2593 0.886563 GCCTCTCTGCATTGCACTTT 59.113 50.000 7.38 0.00 33.79 2.66
2485 2594 1.402456 GCCTCTCTGCATTGCACTTTG 60.402 52.381 7.38 0.00 33.79 2.77
2486 2595 1.402456 CCTCTCTGCATTGCACTTTGC 60.402 52.381 7.38 8.20 45.29 3.68
2496 2605 3.339547 GCACTTTGCAGGGGTAAGA 57.660 52.632 2.16 0.00 44.26 2.10
2497 2606 0.881796 GCACTTTGCAGGGGTAAGAC 59.118 55.000 2.16 0.00 44.26 3.01
2498 2607 1.545651 GCACTTTGCAGGGGTAAGACT 60.546 52.381 2.16 0.00 44.26 3.24
2499 2608 2.290071 GCACTTTGCAGGGGTAAGACTA 60.290 50.000 2.16 0.00 44.26 2.59
2500 2609 3.600388 CACTTTGCAGGGGTAAGACTAG 58.400 50.000 2.16 0.00 0.00 2.57
2501 2610 2.572104 ACTTTGCAGGGGTAAGACTAGG 59.428 50.000 2.16 0.00 0.00 3.02
2502 2611 2.337359 TTGCAGGGGTAAGACTAGGT 57.663 50.000 0.00 0.00 0.00 3.08
2503 2612 2.337359 TGCAGGGGTAAGACTAGGTT 57.663 50.000 0.00 0.00 0.00 3.50
2504 2613 2.185387 TGCAGGGGTAAGACTAGGTTC 58.815 52.381 0.00 0.00 0.00 3.62
2505 2614 1.485480 GCAGGGGTAAGACTAGGTTCC 59.515 57.143 0.00 0.00 0.00 3.62
2506 2615 2.893153 GCAGGGGTAAGACTAGGTTCCT 60.893 54.545 0.00 0.00 0.00 3.36
2507 2616 3.629282 GCAGGGGTAAGACTAGGTTCCTA 60.629 52.174 0.00 0.00 0.00 2.94
2508 2617 4.817286 CAGGGGTAAGACTAGGTTCCTAT 58.183 47.826 0.00 0.00 0.00 2.57
2509 2618 5.694949 GCAGGGGTAAGACTAGGTTCCTATA 60.695 48.000 0.00 0.00 0.00 1.31
2510 2619 6.379579 CAGGGGTAAGACTAGGTTCCTATAA 58.620 44.000 0.00 0.00 0.00 0.98
2511 2620 7.017531 CAGGGGTAAGACTAGGTTCCTATAAT 58.982 42.308 0.00 0.00 0.00 1.28
2512 2621 7.178805 CAGGGGTAAGACTAGGTTCCTATAATC 59.821 44.444 0.00 0.00 0.00 1.75
2513 2622 6.440010 GGGGTAAGACTAGGTTCCTATAATCC 59.560 46.154 0.00 0.00 0.00 3.01
2514 2623 6.440010 GGGTAAGACTAGGTTCCTATAATCCC 59.560 46.154 0.00 4.36 0.00 3.85
2515 2624 7.247500 GGTAAGACTAGGTTCCTATAATCCCT 58.753 42.308 0.00 0.00 0.00 4.20
2516 2625 7.396907 GGTAAGACTAGGTTCCTATAATCCCTC 59.603 44.444 0.00 0.00 0.00 4.30
2517 2626 5.906254 AGACTAGGTTCCTATAATCCCTCC 58.094 45.833 0.00 0.00 0.00 4.30
2518 2627 5.024785 GACTAGGTTCCTATAATCCCTCCC 58.975 50.000 0.00 0.00 0.00 4.30
2519 2628 3.293215 AGGTTCCTATAATCCCTCCCC 57.707 52.381 0.00 0.00 0.00 4.81
2520 2629 2.531463 AGGTTCCTATAATCCCTCCCCA 59.469 50.000 0.00 0.00 0.00 4.96
2521 2630 2.913617 GGTTCCTATAATCCCTCCCCAG 59.086 54.545 0.00 0.00 0.00 4.45
2522 2631 3.441054 GGTTCCTATAATCCCTCCCCAGA 60.441 52.174 0.00 0.00 0.00 3.86
2523 2632 3.562108 TCCTATAATCCCTCCCCAGAC 57.438 52.381 0.00 0.00 0.00 3.51
2524 2633 2.113777 TCCTATAATCCCTCCCCAGACC 59.886 54.545 0.00 0.00 0.00 3.85
2525 2634 2.552367 CTATAATCCCTCCCCAGACCC 58.448 57.143 0.00 0.00 0.00 4.46
2526 2635 0.103876 ATAATCCCTCCCCAGACCCC 60.104 60.000 0.00 0.00 0.00 4.95
2527 2636 1.542093 TAATCCCTCCCCAGACCCCA 61.542 60.000 0.00 0.00 0.00 4.96
2528 2637 3.660092 ATCCCTCCCCAGACCCCAC 62.660 68.421 0.00 0.00 0.00 4.61
2530 2639 4.354943 CCTCCCCAGACCCCACCT 62.355 72.222 0.00 0.00 0.00 4.00
2531 2640 2.204151 CTCCCCAGACCCCACCTT 60.204 66.667 0.00 0.00 0.00 3.50
2532 2641 2.531685 TCCCCAGACCCCACCTTG 60.532 66.667 0.00 0.00 0.00 3.61
2533 2642 2.858974 CCCCAGACCCCACCTTGT 60.859 66.667 0.00 0.00 0.00 3.16
2534 2643 2.436109 CCCAGACCCCACCTTGTG 59.564 66.667 0.00 0.00 0.00 3.33
2535 2644 2.460853 CCCAGACCCCACCTTGTGT 61.461 63.158 0.00 0.00 0.00 3.72
2536 2645 1.228245 CCAGACCCCACCTTGTGTG 60.228 63.158 0.00 0.00 45.01 3.82
2543 2652 4.907457 CACCTTGTGTGGGAGCTT 57.093 55.556 0.00 0.00 41.52 3.74
2544 2653 2.633860 CACCTTGTGTGGGAGCTTC 58.366 57.895 0.00 0.00 41.52 3.86
2545 2654 0.109342 CACCTTGTGTGGGAGCTTCT 59.891 55.000 0.00 0.00 41.52 2.85
2546 2655 1.347707 CACCTTGTGTGGGAGCTTCTA 59.652 52.381 0.00 0.00 41.52 2.10
2547 2656 2.026822 CACCTTGTGTGGGAGCTTCTAT 60.027 50.000 0.00 0.00 41.52 1.98
2548 2657 2.026822 ACCTTGTGTGGGAGCTTCTATG 60.027 50.000 0.00 0.00 0.00 2.23
2549 2658 2.012673 CTTGTGTGGGAGCTTCTATGC 58.987 52.381 0.00 0.00 0.00 3.14
2550 2659 0.983467 TGTGTGGGAGCTTCTATGCA 59.017 50.000 0.00 0.00 34.99 3.96
2551 2660 1.339055 TGTGTGGGAGCTTCTATGCAC 60.339 52.381 0.00 0.00 34.99 4.57
2552 2661 1.065854 GTGTGGGAGCTTCTATGCACT 60.066 52.381 0.00 0.00 34.99 4.40
2553 2662 1.065926 TGTGGGAGCTTCTATGCACTG 60.066 52.381 0.00 0.00 34.99 3.66
2554 2663 0.543277 TGGGAGCTTCTATGCACTGG 59.457 55.000 0.00 0.00 34.99 4.00
2555 2664 0.179034 GGGAGCTTCTATGCACTGGG 60.179 60.000 0.00 0.00 34.99 4.45
2556 2665 0.543749 GGAGCTTCTATGCACTGGGT 59.456 55.000 0.00 0.00 34.99 4.51
2557 2666 1.474143 GGAGCTTCTATGCACTGGGTC 60.474 57.143 0.00 0.00 34.99 4.46
2558 2667 1.484240 GAGCTTCTATGCACTGGGTCT 59.516 52.381 0.00 0.00 34.99 3.85
2559 2668 1.209019 AGCTTCTATGCACTGGGTCTG 59.791 52.381 0.00 0.00 34.99 3.51
2560 2669 1.065854 GCTTCTATGCACTGGGTCTGT 60.066 52.381 0.00 0.00 0.00 3.41
2561 2670 2.898705 CTTCTATGCACTGGGTCTGTC 58.101 52.381 0.00 0.00 0.00 3.51
2562 2671 1.195115 TCTATGCACTGGGTCTGTCC 58.805 55.000 0.00 0.00 0.00 4.02
2563 2672 1.198713 CTATGCACTGGGTCTGTCCT 58.801 55.000 0.00 0.00 36.25 3.85
2564 2673 1.556911 CTATGCACTGGGTCTGTCCTT 59.443 52.381 0.00 0.00 36.25 3.36
2565 2674 0.773644 ATGCACTGGGTCTGTCCTTT 59.226 50.000 0.00 0.00 36.25 3.11
2566 2675 0.550914 TGCACTGGGTCTGTCCTTTT 59.449 50.000 0.00 0.00 36.25 2.27
2567 2676 1.239347 GCACTGGGTCTGTCCTTTTC 58.761 55.000 0.00 0.00 36.25 2.29
2568 2677 1.897560 CACTGGGTCTGTCCTTTTCC 58.102 55.000 0.00 0.00 36.25 3.13
2569 2678 1.421646 CACTGGGTCTGTCCTTTTCCT 59.578 52.381 0.00 0.00 36.25 3.36
2570 2679 2.136026 ACTGGGTCTGTCCTTTTCCTT 58.864 47.619 0.00 0.00 36.25 3.36
2571 2680 2.106684 ACTGGGTCTGTCCTTTTCCTTC 59.893 50.000 0.00 0.00 36.25 3.46
2572 2681 2.106511 CTGGGTCTGTCCTTTTCCTTCA 59.893 50.000 0.00 0.00 36.25 3.02
2573 2682 2.716424 TGGGTCTGTCCTTTTCCTTCAT 59.284 45.455 0.00 0.00 36.25 2.57
2574 2683 3.140144 TGGGTCTGTCCTTTTCCTTCATT 59.860 43.478 0.00 0.00 36.25 2.57
2575 2684 3.759086 GGGTCTGTCCTTTTCCTTCATTC 59.241 47.826 0.00 0.00 36.25 2.67
2576 2685 4.398319 GGTCTGTCCTTTTCCTTCATTCA 58.602 43.478 0.00 0.00 0.00 2.57
2577 2686 4.457257 GGTCTGTCCTTTTCCTTCATTCAG 59.543 45.833 0.00 0.00 0.00 3.02
2592 2701 6.694411 CCTTCATTCAGTTGTTCTTCTGTTTG 59.306 38.462 0.00 0.00 33.89 2.93
2696 2805 7.721842 TGTTTCAGGTAAGAAATATGTTGGACA 59.278 33.333 0.00 0.00 39.46 4.02
2744 2853 2.160417 GTGAGGAATCCTTGCTTGAACG 59.840 50.000 2.09 0.00 31.76 3.95
2828 2937 5.238460 TCAGAATGGATGCCGTAGGTATGA 61.238 45.833 0.00 0.00 45.78 2.15
3035 3144 5.700722 CATATGCATGTGAGCTTATGGTT 57.299 39.130 17.80 0.00 43.42 3.67
3325 3434 2.214376 TCAATGGCTAGTTTGGTGGG 57.786 50.000 0.00 0.00 0.00 4.61
3362 3471 7.877003 ACAACATCGACCAACATTTTGTATTA 58.123 30.769 0.00 0.00 0.00 0.98
3401 3510 5.347635 CCAGCATGCATTATGTTCATATTGC 59.652 40.000 21.98 22.09 39.08 3.56
3767 3877 0.471780 TCTCTGCCTCACAACTGGGA 60.472 55.000 0.00 0.00 0.00 4.37
3769 3879 1.302832 CTGCCTCACAACTGGGACC 60.303 63.158 0.00 0.00 0.00 4.46
3778 3888 3.000727 CACAACTGGGACCGAAATCTAC 58.999 50.000 0.00 0.00 0.00 2.59
3803 3913 2.152830 CAATTGCATTTTGTGTGGGGG 58.847 47.619 0.00 0.00 0.00 5.40
3804 3914 1.727062 ATTGCATTTTGTGTGGGGGA 58.273 45.000 0.00 0.00 0.00 4.81
3805 3915 1.500474 TTGCATTTTGTGTGGGGGAA 58.500 45.000 0.00 0.00 0.00 3.97
3806 3916 1.727062 TGCATTTTGTGTGGGGGAAT 58.273 45.000 0.00 0.00 0.00 3.01
3807 3917 2.053244 TGCATTTTGTGTGGGGGAATT 58.947 42.857 0.00 0.00 0.00 2.17
3808 3918 2.038295 TGCATTTTGTGTGGGGGAATTC 59.962 45.455 0.00 0.00 0.00 2.17
3809 3919 2.930455 GCATTTTGTGTGGGGGAATTCG 60.930 50.000 0.00 0.00 0.00 3.34
3810 3920 2.074729 TTTTGTGTGGGGGAATTCGT 57.925 45.000 0.00 0.00 0.00 3.85
3811 3921 2.953284 TTTGTGTGGGGGAATTCGTA 57.047 45.000 0.00 0.00 0.00 3.43
3812 3922 3.443145 TTTGTGTGGGGGAATTCGTAT 57.557 42.857 0.00 0.00 0.00 3.06
3813 3923 3.443145 TTGTGTGGGGGAATTCGTATT 57.557 42.857 0.00 0.00 0.00 1.89
3814 3924 3.443145 TGTGTGGGGGAATTCGTATTT 57.557 42.857 0.00 0.00 0.00 1.40
3815 3925 4.571369 TGTGTGGGGGAATTCGTATTTA 57.429 40.909 0.00 0.00 0.00 1.40
3816 3926 5.118729 TGTGTGGGGGAATTCGTATTTAT 57.881 39.130 0.00 0.00 0.00 1.40
3817 3927 5.511363 TGTGTGGGGGAATTCGTATTTATT 58.489 37.500 0.00 0.00 0.00 1.40
3818 3928 5.952947 TGTGTGGGGGAATTCGTATTTATTT 59.047 36.000 0.00 0.00 0.00 1.40
3819 3929 6.127591 TGTGTGGGGGAATTCGTATTTATTTG 60.128 38.462 0.00 0.00 0.00 2.32
3820 3930 6.095720 GTGTGGGGGAATTCGTATTTATTTGA 59.904 38.462 0.00 0.00 0.00 2.69
3821 3931 6.836527 TGTGGGGGAATTCGTATTTATTTGAT 59.163 34.615 0.00 0.00 0.00 2.57
3822 3932 7.145323 GTGGGGGAATTCGTATTTATTTGATG 58.855 38.462 0.00 0.00 0.00 3.07
3823 3933 7.013846 GTGGGGGAATTCGTATTTATTTGATGA 59.986 37.037 0.00 0.00 0.00 2.92
3824 3934 7.561722 TGGGGGAATTCGTATTTATTTGATGAA 59.438 33.333 0.00 0.00 0.00 2.57
3825 3935 8.585018 GGGGGAATTCGTATTTATTTGATGAAT 58.415 33.333 0.00 0.00 31.61 2.57
3826 3936 9.626045 GGGGAATTCGTATTTATTTGATGAATC 57.374 33.333 0.00 0.00 30.33 2.52
4096 4206 1.770957 GCTTCCAAGAAAAAGCACGG 58.229 50.000 2.41 0.00 45.67 4.94
4097 4207 1.067060 GCTTCCAAGAAAAAGCACGGT 59.933 47.619 2.41 0.00 45.67 4.83
4098 4208 2.731217 CTTCCAAGAAAAAGCACGGTG 58.269 47.619 3.15 3.15 0.00 4.94
4099 4209 0.383949 TCCAAGAAAAAGCACGGTGC 59.616 50.000 25.00 25.00 45.46 5.01
4129 4239 2.508439 CACCGGCGTCGCTGTATT 60.508 61.111 23.75 5.81 32.22 1.89
4130 4240 2.098233 CACCGGCGTCGCTGTATTT 61.098 57.895 23.75 3.30 32.22 1.40
4131 4241 0.802994 CACCGGCGTCGCTGTATTTA 60.803 55.000 23.75 0.00 32.22 1.40
4132 4242 0.108709 ACCGGCGTCGCTGTATTTAA 60.109 50.000 23.75 0.00 32.22 1.52
4133 4243 0.575390 CCGGCGTCGCTGTATTTAAG 59.425 55.000 23.75 3.66 32.22 1.85
4134 4244 1.274596 CGGCGTCGCTGTATTTAAGT 58.725 50.000 18.08 0.00 0.00 2.24
4135 4245 1.657094 CGGCGTCGCTGTATTTAAGTT 59.343 47.619 18.08 0.00 0.00 2.66
4136 4246 2.093152 CGGCGTCGCTGTATTTAAGTTT 59.907 45.455 18.08 0.00 0.00 2.66
4137 4247 3.304026 CGGCGTCGCTGTATTTAAGTTTA 59.696 43.478 18.08 0.00 0.00 2.01
4138 4248 4.201608 CGGCGTCGCTGTATTTAAGTTTAA 60.202 41.667 18.08 0.00 0.00 1.52
4139 4249 5.620467 GGCGTCGCTGTATTTAAGTTTAAA 58.380 37.500 18.11 0.02 37.08 1.52
4140 4250 5.505792 GGCGTCGCTGTATTTAAGTTTAAAC 59.494 40.000 18.11 10.47 35.65 2.01
4141 4251 6.072733 GCGTCGCTGTATTTAAGTTTAAACA 58.927 36.000 20.06 0.00 35.65 2.83
4142 4252 6.574462 GCGTCGCTGTATTTAAGTTTAAACAA 59.426 34.615 20.06 6.58 35.65 2.83
4143 4253 7.269724 GCGTCGCTGTATTTAAGTTTAAACAAT 59.730 33.333 20.06 12.95 35.65 2.71
4144 4254 9.109533 CGTCGCTGTATTTAAGTTTAAACAATT 57.890 29.630 20.06 9.24 35.65 2.32
4174 4284 8.113173 AGAAAAACGGGCTATTATTTACAACA 57.887 30.769 0.00 0.00 0.00 3.33
4175 4285 8.241367 AGAAAAACGGGCTATTATTTACAACAG 58.759 33.333 0.00 0.00 0.00 3.16
4176 4286 7.457024 AAAACGGGCTATTATTTACAACAGT 57.543 32.000 0.00 0.00 0.00 3.55
4177 4287 8.564509 AAAACGGGCTATTATTTACAACAGTA 57.435 30.769 0.00 0.00 0.00 2.74
4178 4288 8.564509 AAACGGGCTATTATTTACAACAGTAA 57.435 30.769 0.00 0.00 0.00 2.24
4179 4289 8.564509 AACGGGCTATTATTTACAACAGTAAA 57.435 30.769 3.61 3.61 40.74 2.01
4180 4290 8.741603 ACGGGCTATTATTTACAACAGTAAAT 57.258 30.769 15.38 15.38 45.50 1.40
4181 4291 9.835389 ACGGGCTATTATTTACAACAGTAAATA 57.165 29.630 13.78 13.78 43.20 1.40
4255 4365 9.656323 TTATATTGTACTCCCTCTATTCACTGT 57.344 33.333 0.00 0.00 0.00 3.55
4256 4366 6.875972 ATTGTACTCCCTCTATTCACTGTT 57.124 37.500 0.00 0.00 0.00 3.16
4257 4367 7.973048 ATTGTACTCCCTCTATTCACTGTTA 57.027 36.000 0.00 0.00 0.00 2.41
4258 4368 7.973048 TTGTACTCCCTCTATTCACTGTTAT 57.027 36.000 0.00 0.00 0.00 1.89
4259 4369 9.656323 ATTGTACTCCCTCTATTCACTGTTATA 57.344 33.333 0.00 0.00 0.00 0.98
4260 4370 9.483489 TTGTACTCCCTCTATTCACTGTTATAA 57.517 33.333 0.00 0.00 0.00 0.98
4261 4371 9.132923 TGTACTCCCTCTATTCACTGTTATAAG 57.867 37.037 0.00 0.00 0.00 1.73
4262 4372 9.352191 GTACTCCCTCTATTCACTGTTATAAGA 57.648 37.037 0.00 0.00 0.00 2.10
4264 4374 8.865090 ACTCCCTCTATTCACTGTTATAAGATG 58.135 37.037 0.00 0.00 0.00 2.90
4265 4375 8.783660 TCCCTCTATTCACTGTTATAAGATGT 57.216 34.615 0.00 0.00 0.00 3.06
4266 4376 9.213777 TCCCTCTATTCACTGTTATAAGATGTT 57.786 33.333 0.00 0.00 0.00 2.71
4267 4377 9.482627 CCCTCTATTCACTGTTATAAGATGTTC 57.517 37.037 0.00 0.00 0.00 3.18
4317 4427 8.677871 TGTATGTATAGACGTGTTTTAGTGTG 57.322 34.615 0.00 0.00 0.00 3.82
4318 4428 8.298854 TGTATGTATAGACGTGTTTTAGTGTGT 58.701 33.333 0.00 0.00 0.00 3.72
4319 4429 9.132521 GTATGTATAGACGTGTTTTAGTGTGTT 57.867 33.333 0.00 0.00 0.00 3.32
4320 4430 8.597662 ATGTATAGACGTGTTTTAGTGTGTTT 57.402 30.769 0.00 0.00 0.00 2.83
4321 4431 7.843482 TGTATAGACGTGTTTTAGTGTGTTTG 58.157 34.615 0.00 0.00 0.00 2.93
4322 4432 6.913873 ATAGACGTGTTTTAGTGTGTTTGT 57.086 33.333 0.00 0.00 0.00 2.83
4323 4433 5.616488 AGACGTGTTTTAGTGTGTTTGTT 57.384 34.783 0.00 0.00 0.00 2.83
4324 4434 6.004408 AGACGTGTTTTAGTGTGTTTGTTT 57.996 33.333 0.00 0.00 0.00 2.83
4325 4435 7.131498 AGACGTGTTTTAGTGTGTTTGTTTA 57.869 32.000 0.00 0.00 0.00 2.01
4326 4436 7.017055 AGACGTGTTTTAGTGTGTTTGTTTAC 58.983 34.615 0.00 0.00 0.00 2.01
4327 4437 6.901265 ACGTGTTTTAGTGTGTTTGTTTACT 58.099 32.000 0.00 0.00 0.00 2.24
4328 4438 7.017055 ACGTGTTTTAGTGTGTTTGTTTACTC 58.983 34.615 0.00 0.00 0.00 2.59
4329 4439 7.016466 CGTGTTTTAGTGTGTTTGTTTACTCA 58.984 34.615 0.00 0.00 0.00 3.41
4330 4440 7.694784 CGTGTTTTAGTGTGTTTGTTTACTCAT 59.305 33.333 0.00 0.00 0.00 2.90
4331 4441 9.349145 GTGTTTTAGTGTGTTTGTTTACTCATT 57.651 29.630 0.00 0.00 0.00 2.57
4332 4442 9.915629 TGTTTTAGTGTGTTTGTTTACTCATTT 57.084 25.926 0.00 0.00 0.00 2.32
4335 4445 9.781834 TTTAGTGTGTTTGTTTACTCATTTCAG 57.218 29.630 0.00 0.00 0.00 3.02
4336 4446 7.391148 AGTGTGTTTGTTTACTCATTTCAGT 57.609 32.000 0.00 0.00 0.00 3.41
4337 4447 7.250569 AGTGTGTTTGTTTACTCATTTCAGTG 58.749 34.615 0.00 0.00 0.00 3.66
4338 4448 7.027161 GTGTGTTTGTTTACTCATTTCAGTGT 58.973 34.615 0.00 0.00 0.00 3.55
4339 4449 7.008266 GTGTGTTTGTTTACTCATTTCAGTGTG 59.992 37.037 0.00 0.00 0.00 3.82
4340 4450 6.020678 GTGTTTGTTTACTCATTTCAGTGTGC 60.021 38.462 0.00 0.00 0.00 4.57
4341 4451 5.826601 TTGTTTACTCATTTCAGTGTGCA 57.173 34.783 0.00 0.00 0.00 4.57
4342 4452 6.389830 TTGTTTACTCATTTCAGTGTGCAT 57.610 33.333 0.00 0.00 0.00 3.96
4343 4453 5.761003 TGTTTACTCATTTCAGTGTGCATG 58.239 37.500 0.00 0.00 0.00 4.06
4344 4454 5.299028 TGTTTACTCATTTCAGTGTGCATGT 59.701 36.000 0.00 0.00 0.00 3.21
4345 4455 6.484977 TGTTTACTCATTTCAGTGTGCATGTA 59.515 34.615 0.00 0.00 0.00 2.29
4346 4456 6.726258 TTACTCATTTCAGTGTGCATGTAG 57.274 37.500 0.00 0.00 0.00 2.74
4347 4457 4.645535 ACTCATTTCAGTGTGCATGTAGT 58.354 39.130 0.00 0.00 0.00 2.73
4348 4458 4.692625 ACTCATTTCAGTGTGCATGTAGTC 59.307 41.667 0.00 0.00 0.00 2.59
4349 4459 4.002982 TCATTTCAGTGTGCATGTAGTCC 58.997 43.478 0.00 0.00 0.00 3.85
4350 4460 3.483808 TTTCAGTGTGCATGTAGTCCA 57.516 42.857 0.00 0.00 0.00 4.02
4351 4461 3.701205 TTCAGTGTGCATGTAGTCCAT 57.299 42.857 0.00 0.00 0.00 3.41
4352 4462 4.817318 TTCAGTGTGCATGTAGTCCATA 57.183 40.909 0.00 0.00 30.71 2.74
4353 4463 5.357742 TTCAGTGTGCATGTAGTCCATAT 57.642 39.130 0.00 0.00 30.71 1.78
4354 4464 5.357742 TCAGTGTGCATGTAGTCCATATT 57.642 39.130 0.00 0.00 30.71 1.28
4355 4465 6.478512 TCAGTGTGCATGTAGTCCATATTA 57.521 37.500 0.00 0.00 30.71 0.98
4356 4466 6.883744 TCAGTGTGCATGTAGTCCATATTAA 58.116 36.000 0.00 0.00 30.71 1.40
4357 4467 7.334858 TCAGTGTGCATGTAGTCCATATTAAA 58.665 34.615 0.00 0.00 30.71 1.52
4358 4468 7.826744 TCAGTGTGCATGTAGTCCATATTAAAA 59.173 33.333 0.00 0.00 30.71 1.52
4359 4469 8.458052 CAGTGTGCATGTAGTCCATATTAAAAA 58.542 33.333 0.00 0.00 30.71 1.94
4360 4470 9.189156 AGTGTGCATGTAGTCCATATTAAAAAT 57.811 29.630 0.00 0.00 30.71 1.82
4388 4498 9.613428 TCCAAAACATCCTATAATAGTGAACAG 57.387 33.333 0.00 0.00 0.00 3.16
4389 4499 9.613428 CCAAAACATCCTATAATAGTGAACAGA 57.387 33.333 0.00 0.00 0.00 3.41
4391 4501 9.838339 AAAACATCCTATAATAGTGAACAGAGG 57.162 33.333 0.00 0.00 0.00 3.69
4392 4502 7.546250 ACATCCTATAATAGTGAACAGAGGG 57.454 40.000 0.00 0.00 0.00 4.30
4393 4503 7.306013 ACATCCTATAATAGTGAACAGAGGGA 58.694 38.462 0.00 0.00 0.00 4.20
4394 4504 7.453126 ACATCCTATAATAGTGAACAGAGGGAG 59.547 40.741 0.00 0.00 0.00 4.30
4395 4505 6.923670 TCCTATAATAGTGAACAGAGGGAGT 58.076 40.000 0.00 0.00 0.00 3.85
4396 4506 8.053776 TCCTATAATAGTGAACAGAGGGAGTA 57.946 38.462 0.00 0.00 0.00 2.59
4397 4507 8.164733 TCCTATAATAGTGAACAGAGGGAGTAG 58.835 40.741 0.00 0.00 0.00 2.57
4398 4508 8.164733 CCTATAATAGTGAACAGAGGGAGTAGA 58.835 40.741 0.00 0.00 0.00 2.59
4399 4509 9.747898 CTATAATAGTGAACAGAGGGAGTAGAT 57.252 37.037 0.00 0.00 0.00 1.98
4400 4510 6.723298 AATAGTGAACAGAGGGAGTAGATG 57.277 41.667 0.00 0.00 0.00 2.90
4401 4511 2.763448 AGTGAACAGAGGGAGTAGATGC 59.237 50.000 0.00 0.00 0.00 3.91
4402 4512 2.763448 GTGAACAGAGGGAGTAGATGCT 59.237 50.000 0.00 0.00 0.00 3.79
4403 4513 3.954904 GTGAACAGAGGGAGTAGATGCTA 59.045 47.826 0.00 0.00 0.00 3.49
4404 4514 4.586841 GTGAACAGAGGGAGTAGATGCTAT 59.413 45.833 0.00 0.00 0.00 2.97
4405 4515 5.770663 GTGAACAGAGGGAGTAGATGCTATA 59.229 44.000 0.00 0.00 0.00 1.31
4406 4516 6.435904 GTGAACAGAGGGAGTAGATGCTATAT 59.564 42.308 0.00 0.00 0.00 0.86
4407 4517 7.013220 TGAACAGAGGGAGTAGATGCTATATT 58.987 38.462 0.00 0.00 0.00 1.28
4408 4518 6.849085 ACAGAGGGAGTAGATGCTATATTG 57.151 41.667 0.00 0.00 0.00 1.90
4409 4519 6.556639 ACAGAGGGAGTAGATGCTATATTGA 58.443 40.000 0.00 0.00 0.00 2.57
4410 4520 7.013220 ACAGAGGGAGTAGATGCTATATTGAA 58.987 38.462 0.00 0.00 0.00 2.69
4411 4521 7.677745 ACAGAGGGAGTAGATGCTATATTGAAT 59.322 37.037 0.00 0.00 0.00 2.57
4412 4522 8.196771 CAGAGGGAGTAGATGCTATATTGAATC 58.803 40.741 0.00 0.00 0.00 2.52
4413 4523 8.121833 AGAGGGAGTAGATGCTATATTGAATCT 58.878 37.037 11.75 11.75 36.39 2.40
4414 4524 9.415008 GAGGGAGTAGATGCTATATTGAATCTA 57.585 37.037 9.97 9.97 34.38 1.98
4415 4525 9.775539 AGGGAGTAGATGCTATATTGAATCTAA 57.224 33.333 14.33 0.28 36.61 2.10
4468 4578 9.903682 AGAACTTCACATAATTTTGAACAGATG 57.096 29.630 2.69 0.00 0.00 2.90
4469 4579 9.897744 GAACTTCACATAATTTTGAACAGATGA 57.102 29.630 2.69 0.00 0.00 2.92
4471 4581 9.903682 ACTTCACATAATTTTGAACAGATGAAG 57.096 29.630 16.19 16.19 43.07 3.02
4472 4582 9.903682 CTTCACATAATTTTGAACAGATGAAGT 57.096 29.630 2.69 0.00 36.29 3.01
4480 4590 9.956720 AATTTTGAACAGATGAAGTACTCAAAG 57.043 29.630 0.00 0.00 37.67 2.77
4481 4591 8.506168 TTTTGAACAGATGAAGTACTCAAAGT 57.494 30.769 0.00 0.00 37.67 2.66
4482 4592 7.482654 TTGAACAGATGAAGTACTCAAAGTG 57.517 36.000 0.00 0.00 37.67 3.16
4483 4593 6.816136 TGAACAGATGAAGTACTCAAAGTGA 58.184 36.000 0.00 0.00 37.67 3.41
4484 4594 6.701841 TGAACAGATGAAGTACTCAAAGTGAC 59.298 38.462 0.00 0.00 37.67 3.67
4485 4595 5.542779 ACAGATGAAGTACTCAAAGTGACC 58.457 41.667 0.00 0.00 37.67 4.02
4486 4596 5.070446 ACAGATGAAGTACTCAAAGTGACCA 59.930 40.000 0.00 0.00 37.67 4.02
4487 4597 5.991606 CAGATGAAGTACTCAAAGTGACCAA 59.008 40.000 0.00 0.00 37.67 3.67
4488 4598 6.652481 CAGATGAAGTACTCAAAGTGACCAAT 59.348 38.462 0.00 0.00 37.67 3.16
4489 4599 6.876257 AGATGAAGTACTCAAAGTGACCAATC 59.124 38.462 0.00 0.00 37.67 2.67
4490 4600 5.924356 TGAAGTACTCAAAGTGACCAATCA 58.076 37.500 0.00 0.00 0.00 2.57
4491 4601 6.533730 TGAAGTACTCAAAGTGACCAATCAT 58.466 36.000 0.00 0.00 37.14 2.45
4492 4602 6.427853 TGAAGTACTCAAAGTGACCAATCATG 59.572 38.462 0.00 0.00 37.14 3.07
4493 4603 4.697352 AGTACTCAAAGTGACCAATCATGC 59.303 41.667 0.00 0.00 37.14 4.06
4494 4604 3.489355 ACTCAAAGTGACCAATCATGCA 58.511 40.909 0.00 0.00 37.14 3.96
4495 4605 3.254166 ACTCAAAGTGACCAATCATGCAC 59.746 43.478 0.00 0.00 37.14 4.57
4496 4606 3.489355 TCAAAGTGACCAATCATGCACT 58.511 40.909 0.00 0.00 42.91 4.40
4497 4607 4.650734 TCAAAGTGACCAATCATGCACTA 58.349 39.130 0.00 0.00 40.43 2.74
4498 4608 5.255687 TCAAAGTGACCAATCATGCACTAT 58.744 37.500 0.00 0.00 40.43 2.12
4499 4609 5.355071 TCAAAGTGACCAATCATGCACTATC 59.645 40.000 0.00 0.00 40.43 2.08
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 47 4.492570 CGTCTTCGATTTGATGTAAGTGCC 60.493 45.833 0.00 0.00 39.71 5.01
106 108 3.746045 TGGATATTAGGCTCACGTTCC 57.254 47.619 0.00 0.00 0.00 3.62
174 176 5.329191 TCTATATTGGAACGGAGGGAGTA 57.671 43.478 0.00 0.00 0.00 2.59
175 177 4.194678 TCTATATTGGAACGGAGGGAGT 57.805 45.455 0.00 0.00 0.00 3.85
176 178 4.772624 TCATCTATATTGGAACGGAGGGAG 59.227 45.833 0.00 0.00 0.00 4.30
177 179 4.527038 GTCATCTATATTGGAACGGAGGGA 59.473 45.833 0.00 0.00 0.00 4.20
178 180 4.322801 GGTCATCTATATTGGAACGGAGGG 60.323 50.000 0.00 0.00 0.00 4.30
179 181 4.322801 GGGTCATCTATATTGGAACGGAGG 60.323 50.000 0.00 0.00 0.00 4.30
180 182 4.283467 TGGGTCATCTATATTGGAACGGAG 59.717 45.833 0.00 0.00 0.00 4.63
181 183 4.228010 TGGGTCATCTATATTGGAACGGA 58.772 43.478 0.00 0.00 0.00 4.69
182 184 4.617253 TGGGTCATCTATATTGGAACGG 57.383 45.455 0.00 0.00 0.00 4.44
183 185 7.510549 AATTTGGGTCATCTATATTGGAACG 57.489 36.000 0.00 0.00 0.00 3.95
184 186 8.695456 ACAAATTTGGGTCATCTATATTGGAAC 58.305 33.333 21.74 0.00 0.00 3.62
185 187 8.837099 ACAAATTTGGGTCATCTATATTGGAA 57.163 30.769 21.74 0.00 0.00 3.53
186 188 9.349713 GTACAAATTTGGGTCATCTATATTGGA 57.650 33.333 21.74 0.00 0.00 3.53
187 189 9.354673 AGTACAAATTTGGGTCATCTATATTGG 57.645 33.333 21.74 0.00 0.00 3.16
192 194 9.975218 AAGTTAGTACAAATTTGGGTCATCTAT 57.025 29.630 21.74 0.60 0.00 1.98
193 195 9.802039 AAAGTTAGTACAAATTTGGGTCATCTA 57.198 29.630 21.74 11.08 0.00 1.98
194 196 8.706322 AAAGTTAGTACAAATTTGGGTCATCT 57.294 30.769 21.74 10.32 0.00 2.90
196 198 9.582648 ACTAAAGTTAGTACAAATTTGGGTCAT 57.417 29.630 21.74 3.45 41.92 3.06
197 199 8.983702 ACTAAAGTTAGTACAAATTTGGGTCA 57.016 30.769 21.74 2.29 41.92 4.02
220 222 9.310716 GACTCAACTTTGTACTAACTTTGTACT 57.689 33.333 12.73 0.00 40.44 2.73
221 223 9.090692 TGACTCAACTTTGTACTAACTTTGTAC 57.909 33.333 6.58 6.58 40.27 2.90
222 224 9.826574 ATGACTCAACTTTGTACTAACTTTGTA 57.173 29.630 0.00 0.00 0.00 2.41
223 225 8.732746 ATGACTCAACTTTGTACTAACTTTGT 57.267 30.769 0.00 0.00 0.00 2.83
224 226 9.046296 AGATGACTCAACTTTGTACTAACTTTG 57.954 33.333 0.00 0.00 0.00 2.77
231 233 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
232 234 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
233 235 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
234 236 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
235 237 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
236 238 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
237 239 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
238 240 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
239 241 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
240 242 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
241 243 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
242 244 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
243 245 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
244 246 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
245 247 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
246 248 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
247 249 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
248 250 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
249 251 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
250 252 5.190132 TGATTACTCCCTCCGTTCCAAAATA 59.810 40.000 0.00 0.00 0.00 1.40
251 253 4.018779 TGATTACTCCCTCCGTTCCAAAAT 60.019 41.667 0.00 0.00 0.00 1.82
252 254 3.328343 TGATTACTCCCTCCGTTCCAAAA 59.672 43.478 0.00 0.00 0.00 2.44
253 255 2.907696 TGATTACTCCCTCCGTTCCAAA 59.092 45.455 0.00 0.00 0.00 3.28
254 256 2.542550 TGATTACTCCCTCCGTTCCAA 58.457 47.619 0.00 0.00 0.00 3.53
255 257 2.235402 GTTGATTACTCCCTCCGTTCCA 59.765 50.000 0.00 0.00 0.00 3.53
256 258 2.500504 AGTTGATTACTCCCTCCGTTCC 59.499 50.000 0.00 0.00 28.23 3.62
257 259 3.522553 CAGTTGATTACTCCCTCCGTTC 58.477 50.000 0.00 0.00 33.85 3.95
258 260 2.354805 GCAGTTGATTACTCCCTCCGTT 60.355 50.000 0.00 0.00 33.85 4.44
259 261 1.207329 GCAGTTGATTACTCCCTCCGT 59.793 52.381 0.00 0.00 33.85 4.69
260 262 1.482593 AGCAGTTGATTACTCCCTCCG 59.517 52.381 0.00 0.00 33.85 4.63
261 263 4.755266 TTAGCAGTTGATTACTCCCTCC 57.245 45.455 0.00 0.00 33.85 4.30
262 264 5.525378 CACATTAGCAGTTGATTACTCCCTC 59.475 44.000 0.00 0.00 33.85 4.30
263 265 5.431765 CACATTAGCAGTTGATTACTCCCT 58.568 41.667 0.00 0.00 33.85 4.20
264 266 4.576463 CCACATTAGCAGTTGATTACTCCC 59.424 45.833 0.00 0.00 33.85 4.30
265 267 4.035675 GCCACATTAGCAGTTGATTACTCC 59.964 45.833 0.00 0.00 33.85 3.85
266 268 4.878397 AGCCACATTAGCAGTTGATTACTC 59.122 41.667 0.00 0.00 33.85 2.59
267 269 4.848357 AGCCACATTAGCAGTTGATTACT 58.152 39.130 0.00 0.00 37.68 2.24
268 270 6.677781 TTAGCCACATTAGCAGTTGATTAC 57.322 37.500 0.00 0.00 0.00 1.89
300 302 5.738909 CTCTGGATGTTGAACCTTCATACT 58.261 41.667 0.00 0.00 37.00 2.12
315 317 3.014623 TGCTCAAATTCAGCTCTGGATG 58.985 45.455 9.99 0.00 37.79 3.51
372 374 8.807948 ATATTTCAGTTGGTATATATGCCACC 57.192 34.615 20.85 14.89 42.40 4.61
383 385 7.721842 TGTTTTCTGTGGATATTTCAGTTGGTA 59.278 33.333 0.00 0.00 0.00 3.25
384 386 6.549364 TGTTTTCTGTGGATATTTCAGTTGGT 59.451 34.615 0.00 0.00 0.00 3.67
391 393 9.132521 CATGAACTTGTTTTCTGTGGATATTTC 57.867 33.333 0.00 0.00 0.00 2.17
395 397 5.048083 GGCATGAACTTGTTTTCTGTGGATA 60.048 40.000 0.00 0.00 0.00 2.59
403 405 4.522789 TCCTTAGGGCATGAACTTGTTTTC 59.477 41.667 0.00 0.00 0.00 2.29
462 465 9.449719 GTTCTCTTGGTAATTTAGGATTCTGAA 57.550 33.333 0.00 0.00 0.00 3.02
515 518 4.329545 TGTTCCCGCACCAGCCTC 62.330 66.667 0.00 0.00 37.52 4.70
623 626 4.954118 TGGGCGACAGAGTGGGGT 62.954 66.667 0.00 0.00 0.00 4.95
650 653 2.596904 AGGACCGGATGTTCATAACG 57.403 50.000 9.46 3.52 0.00 3.18
872 902 3.411351 CTGTTTCGCACCGACCCG 61.411 66.667 0.00 0.00 34.89 5.28
916 947 3.839642 CTTTTGGGCCGGTTGTGCG 62.840 63.158 1.90 0.00 0.00 5.34
983 1014 2.490148 ATCCCGCTGCTCGAATCGA 61.490 57.895 4.91 4.91 41.67 3.59
984 1015 2.028190 ATCCCGCTGCTCGAATCG 59.972 61.111 0.00 0.00 41.67 3.34
985 1016 1.958205 CCATCCCGCTGCTCGAATC 60.958 63.158 0.00 0.00 41.67 2.52
1035 1072 2.385875 ATCGTCGCTGCTGCTGTTG 61.386 57.895 14.03 0.00 36.97 3.33
1036 1073 2.047844 ATCGTCGCTGCTGCTGTT 60.048 55.556 14.03 0.00 36.97 3.16
1037 1074 2.812609 CATCGTCGCTGCTGCTGT 60.813 61.111 14.03 0.00 36.97 4.40
1154 1191 4.710167 TGTCCTCCTCGACGCCGA 62.710 66.667 0.00 0.00 43.35 5.54
1248 1288 0.384353 GCGAACGTGGAAAGCAAGAC 60.384 55.000 0.00 0.00 0.00 3.01
1312 1384 2.789917 CAGCTGCGGCACTGAATC 59.210 61.111 21.93 0.00 41.70 2.52
1352 1424 3.243035 TGAATCAGCACAACAAAACCGAG 60.243 43.478 0.00 0.00 0.00 4.63
1382 1454 5.946298 TGAAGTATGCATCAAGCTTTGAAG 58.054 37.500 0.19 0.00 43.95 3.02
1409 1504 0.761323 TCGTCCAAGGACCACAGGAA 60.761 55.000 13.35 0.00 41.76 3.36
1421 1516 4.222145 ACCAGCTAATTCTAGTTCGTCCAA 59.778 41.667 0.00 0.00 0.00 3.53
1466 1561 5.466728 GCTGCTATTGCTAACTTGCTATGTA 59.533 40.000 0.00 0.00 40.48 2.29
1473 1568 2.421073 TGCAGCTGCTATTGCTAACTTG 59.579 45.455 36.61 0.00 42.66 3.16
1512 1609 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1513 1610 8.959705 AAAAGACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
1546 1643 4.219944 GCTCCGTATGTAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
1547 1644 4.021456 TGCTCCGTATGTAGTCCATATTGG 60.021 45.833 0.00 0.00 38.29 3.16
1548 1645 5.134202 TGCTCCGTATGTAGTCCATATTG 57.866 43.478 0.00 0.00 38.29 1.90
1549 1646 5.801531 TTGCTCCGTATGTAGTCCATATT 57.198 39.130 0.00 0.00 38.29 1.28
1550 1647 5.801531 TTTGCTCCGTATGTAGTCCATAT 57.198 39.130 0.00 0.00 38.29 1.78
1551 1648 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
1552 1649 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
1553 1650 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
1554 1651 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
1555 1652 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1556 1653 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1557 1654 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1558 1655 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1559 1656 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1560 1657 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1561 1658 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1562 1659 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1563 1660 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1564 1661 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
1565 1662 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
1566 1663 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
1596 1693 9.875691 AACTACATACGGATGTATATAGACGTA 57.124 33.333 20.64 9.65 45.42 3.57
1597 1694 8.783833 AACTACATACGGATGTATATAGACGT 57.216 34.615 20.64 10.41 45.42 4.34
1598 1695 8.333908 GGAACTACATACGGATGTATATAGACG 58.666 40.741 20.64 9.79 45.42 4.18
1599 1696 9.393512 AGGAACTACATACGGATGTATATAGAC 57.606 37.037 20.64 9.46 45.42 2.59
1619 1716 9.674068 GTCCTTTTAGAGATTTCAATAGGAACT 57.326 33.333 0.00 0.00 46.37 3.01
1620 1717 9.674068 AGTCCTTTTAGAGATTTCAATAGGAAC 57.326 33.333 0.00 0.00 34.56 3.62
1633 1730 9.635520 CGTTCTAAATGTAAGTCCTTTTAGAGA 57.364 33.333 0.00 0.00 39.84 3.10
1634 1731 9.635520 TCGTTCTAAATGTAAGTCCTTTTAGAG 57.364 33.333 0.00 0.00 39.84 2.43
1635 1732 9.635520 CTCGTTCTAAATGTAAGTCCTTTTAGA 57.364 33.333 0.00 0.00 38.37 2.10
1636 1733 8.870879 CCTCGTTCTAAATGTAAGTCCTTTTAG 58.129 37.037 0.00 0.00 35.21 1.85
1637 1734 8.587608 TCCTCGTTCTAAATGTAAGTCCTTTTA 58.412 33.333 0.00 0.00 0.00 1.52
1638 1735 7.447594 TCCTCGTTCTAAATGTAAGTCCTTTT 58.552 34.615 0.00 0.00 0.00 2.27
1639 1736 7.001099 TCCTCGTTCTAAATGTAAGTCCTTT 57.999 36.000 0.00 0.00 0.00 3.11
1640 1737 6.351117 CCTCCTCGTTCTAAATGTAAGTCCTT 60.351 42.308 0.00 0.00 0.00 3.36
1641 1738 5.127356 CCTCCTCGTTCTAAATGTAAGTCCT 59.873 44.000 0.00 0.00 0.00 3.85
1642 1739 5.349809 CCTCCTCGTTCTAAATGTAAGTCC 58.650 45.833 0.00 0.00 0.00 3.85
1643 1740 5.126707 TCCCTCCTCGTTCTAAATGTAAGTC 59.873 44.000 0.00 0.00 0.00 3.01
1644 1741 5.021458 TCCCTCCTCGTTCTAAATGTAAGT 58.979 41.667 0.00 0.00 0.00 2.24
1645 1742 5.127356 ACTCCCTCCTCGTTCTAAATGTAAG 59.873 44.000 0.00 0.00 0.00 2.34
1646 1743 5.021458 ACTCCCTCCTCGTTCTAAATGTAA 58.979 41.667 0.00 0.00 0.00 2.41
1647 1744 4.607239 ACTCCCTCCTCGTTCTAAATGTA 58.393 43.478 0.00 0.00 0.00 2.29
1648 1745 3.442076 ACTCCCTCCTCGTTCTAAATGT 58.558 45.455 0.00 0.00 0.00 2.71
1649 1746 5.793030 ATACTCCCTCCTCGTTCTAAATG 57.207 43.478 0.00 0.00 0.00 2.32
1650 1747 7.094291 CGAATATACTCCCTCCTCGTTCTAAAT 60.094 40.741 0.00 0.00 0.00 1.40
1651 1748 6.206243 CGAATATACTCCCTCCTCGTTCTAAA 59.794 42.308 0.00 0.00 0.00 1.85
1652 1749 5.704515 CGAATATACTCCCTCCTCGTTCTAA 59.295 44.000 0.00 0.00 0.00 2.10
1653 1750 5.012458 TCGAATATACTCCCTCCTCGTTCTA 59.988 44.000 0.00 0.00 0.00 2.10
1654 1751 4.073549 CGAATATACTCCCTCCTCGTTCT 58.926 47.826 0.00 0.00 0.00 3.01
1655 1752 4.070716 TCGAATATACTCCCTCCTCGTTC 58.929 47.826 0.00 0.00 0.00 3.95
1656 1753 4.073549 CTCGAATATACTCCCTCCTCGTT 58.926 47.826 0.00 0.00 0.00 3.85
1657 1754 3.072768 ACTCGAATATACTCCCTCCTCGT 59.927 47.826 0.00 0.00 0.00 4.18
1658 1755 3.437395 CACTCGAATATACTCCCTCCTCG 59.563 52.174 0.00 0.00 0.00 4.63
1659 1756 3.759618 CCACTCGAATATACTCCCTCCTC 59.240 52.174 0.00 0.00 0.00 3.71
1660 1757 3.500654 CCCACTCGAATATACTCCCTCCT 60.501 52.174 0.00 0.00 0.00 3.69
1661 1758 2.826725 CCCACTCGAATATACTCCCTCC 59.173 54.545 0.00 0.00 0.00 4.30
1662 1759 3.764218 TCCCACTCGAATATACTCCCTC 58.236 50.000 0.00 0.00 0.00 4.30
1663 1760 3.897657 TCCCACTCGAATATACTCCCT 57.102 47.619 0.00 0.00 0.00 4.20
1664 1761 7.724506 TGATATATCCCACTCGAATATACTCCC 59.275 40.741 10.25 0.00 0.00 4.30
1665 1762 8.693120 TGATATATCCCACTCGAATATACTCC 57.307 38.462 10.25 0.00 0.00 3.85
1666 1763 9.344772 ACTGATATATCCCACTCGAATATACTC 57.655 37.037 10.25 0.00 0.00 2.59
1667 1764 9.126151 CACTGATATATCCCACTCGAATATACT 57.874 37.037 10.25 0.00 0.00 2.12
1672 1769 6.672266 AACACTGATATATCCCACTCGAAT 57.328 37.500 10.25 0.00 0.00 3.34
1681 1778 4.219944 TCCGCTGGTAACACTGATATATCC 59.780 45.833 10.25 0.00 46.17 2.59
1723 1820 2.168496 ACCGTAGCTACTCTGCAAGAA 58.832 47.619 21.20 0.00 46.34 2.52
1747 1844 6.923928 AACATGTTGGGTTTTCTCAATTTG 57.076 33.333 11.07 0.00 42.66 2.32
1764 1861 3.587061 TCAGTCTATGGGGTGAAACATGT 59.413 43.478 0.00 0.00 39.98 3.21
1987 2094 6.323739 GTCAAAGCAATAAGGGGAATTGGATA 59.676 38.462 0.00 0.00 35.34 2.59
2010 2118 2.280628 CGGAGCATCTACCAAAAGGTC 58.719 52.381 0.00 0.00 33.73 3.85
2027 2135 8.176365 CGTAAATTATTTAACACATGGAACGGA 58.824 33.333 0.00 0.00 0.00 4.69
2037 2145 5.125900 AGGCCCACCGTAAATTATTTAACAC 59.874 40.000 0.00 0.00 42.76 3.32
2064 2172 6.710744 ACCAACGGAAACTAATATGATGATCC 59.289 38.462 0.00 0.00 0.00 3.36
2072 2180 6.303903 ACAGGTACCAACGGAAACTAATAT 57.696 37.500 15.94 0.00 0.00 1.28
2083 2191 0.953960 GGCTTGGACAGGTACCAACG 60.954 60.000 15.94 4.47 41.64 4.10
2098 2206 5.133221 AGTGATGAACTTACTTTGTGGCTT 58.867 37.500 0.00 0.00 34.57 4.35
2216 2324 9.778741 AAGTGATGAACTACTACATTCTGAAAA 57.221 29.630 0.00 0.00 38.56 2.29
2292 2400 4.202441 GCAGGTCTGAATGGTGAATACAT 58.798 43.478 1.65 0.00 0.00 2.29
2319 2427 9.547753 AGTGAAATGGTTATACTATAGTTGCAG 57.452 33.333 11.40 0.00 0.00 4.41
2395 2504 1.165907 CGCCAGGCACAGAAGAACAA 61.166 55.000 13.30 0.00 0.00 2.83
2396 2505 1.597854 CGCCAGGCACAGAAGAACA 60.598 57.895 13.30 0.00 0.00 3.18
2397 2506 2.970974 GCGCCAGGCACAGAAGAAC 61.971 63.158 13.30 0.00 42.87 3.01
2398 2507 2.669569 GCGCCAGGCACAGAAGAA 60.670 61.111 13.30 0.00 42.87 2.52
2408 2517 3.052082 CTTCACCACTGCGCCAGG 61.052 66.667 4.18 6.64 35.51 4.45
2409 2518 2.281070 ACTTCACCACTGCGCCAG 60.281 61.111 4.18 4.99 37.52 4.85
2410 2519 2.280797 GACTTCACCACTGCGCCA 60.281 61.111 4.18 0.00 0.00 5.69
2411 2520 3.050275 GGACTTCACCACTGCGCC 61.050 66.667 4.18 0.00 0.00 6.53
2412 2521 2.029844 GAGGACTTCACCACTGCGC 61.030 63.158 0.00 0.00 0.00 6.09
2413 2522 1.374758 GGAGGACTTCACCACTGCG 60.375 63.158 0.00 0.00 0.00 5.18
2414 2523 1.003233 GGGAGGACTTCACCACTGC 60.003 63.158 0.00 0.00 0.00 4.40
2420 2529 0.765510 ACAAGTGGGGAGGACTTCAC 59.234 55.000 0.00 0.00 31.05 3.18
2421 2530 0.764890 CACAAGTGGGGAGGACTTCA 59.235 55.000 0.00 0.00 31.05 3.02
2422 2531 0.606673 GCACAAGTGGGGAGGACTTC 60.607 60.000 2.00 0.00 31.05 3.01
2423 2532 1.456287 GCACAAGTGGGGAGGACTT 59.544 57.895 2.00 0.00 33.82 3.01
2424 2533 2.529744 GGCACAAGTGGGGAGGACT 61.530 63.158 2.00 0.00 0.00 3.85
2425 2534 2.034221 GGCACAAGTGGGGAGGAC 59.966 66.667 2.00 0.00 0.00 3.85
2426 2535 2.449518 TGGCACAAGTGGGGAGGA 60.450 61.111 2.00 0.00 31.92 3.71
2437 2546 2.528818 CCCAGGACCTCTTGGCACA 61.529 63.158 0.00 0.00 41.31 4.57
2438 2547 2.069165 AACCCAGGACCTCTTGGCAC 62.069 60.000 0.00 0.00 41.31 5.01
2439 2548 1.774217 AACCCAGGACCTCTTGGCA 60.774 57.895 0.00 0.00 41.31 4.92
2440 2549 1.002011 GAACCCAGGACCTCTTGGC 60.002 63.158 0.00 0.00 41.31 4.52
2441 2550 1.192146 TCGAACCCAGGACCTCTTGG 61.192 60.000 0.00 0.00 42.20 3.61
2442 2551 0.685097 TTCGAACCCAGGACCTCTTG 59.315 55.000 0.00 0.00 0.00 3.02
2443 2552 0.685660 GTTCGAACCCAGGACCTCTT 59.314 55.000 17.68 0.00 0.00 2.85
2444 2553 1.192803 GGTTCGAACCCAGGACCTCT 61.193 60.000 33.02 0.00 43.43 3.69
2445 2554 1.295746 GGTTCGAACCCAGGACCTC 59.704 63.158 33.02 7.79 43.43 3.85
2446 2555 3.479979 GGTTCGAACCCAGGACCT 58.520 61.111 33.02 0.00 43.43 3.85
2455 2564 1.016653 GCAGAGAGGCTGGTTCGAAC 61.017 60.000 20.14 20.14 45.03 3.95
2456 2565 1.293498 GCAGAGAGGCTGGTTCGAA 59.707 57.895 0.00 0.00 45.03 3.71
2457 2566 1.260538 ATGCAGAGAGGCTGGTTCGA 61.261 55.000 0.00 0.00 45.03 3.71
2458 2567 0.392193 AATGCAGAGAGGCTGGTTCG 60.392 55.000 0.00 0.00 45.03 3.95
2459 2568 1.093159 CAATGCAGAGAGGCTGGTTC 58.907 55.000 0.00 0.00 45.03 3.62
2460 2569 0.964358 GCAATGCAGAGAGGCTGGTT 60.964 55.000 0.00 0.00 45.03 3.67
2461 2570 1.378250 GCAATGCAGAGAGGCTGGT 60.378 57.895 0.00 0.00 45.03 4.00
2462 2571 1.378119 TGCAATGCAGAGAGGCTGG 60.378 57.895 2.72 0.00 45.03 4.85
2464 2573 0.037877 AAGTGCAATGCAGAGAGGCT 59.962 50.000 8.73 0.00 40.08 4.58
2465 2574 0.886563 AAAGTGCAATGCAGAGAGGC 59.113 50.000 8.73 0.00 40.08 4.70
2466 2575 1.402456 GCAAAGTGCAATGCAGAGAGG 60.402 52.381 8.73 0.00 44.26 3.69
2467 2576 1.978542 GCAAAGTGCAATGCAGAGAG 58.021 50.000 8.73 0.33 44.26 3.20
2478 2587 0.881796 GTCTTACCCCTGCAAAGTGC 59.118 55.000 0.00 0.00 45.29 4.40
2479 2588 2.568623 AGTCTTACCCCTGCAAAGTG 57.431 50.000 0.00 0.00 0.00 3.16
2480 2589 2.572104 CCTAGTCTTACCCCTGCAAAGT 59.428 50.000 0.00 0.00 0.00 2.66
2481 2590 2.572104 ACCTAGTCTTACCCCTGCAAAG 59.428 50.000 0.00 0.00 0.00 2.77
2482 2591 2.627933 ACCTAGTCTTACCCCTGCAAA 58.372 47.619 0.00 0.00 0.00 3.68
2483 2592 2.337359 ACCTAGTCTTACCCCTGCAA 57.663 50.000 0.00 0.00 0.00 4.08
2484 2593 2.185387 GAACCTAGTCTTACCCCTGCA 58.815 52.381 0.00 0.00 0.00 4.41
2485 2594 1.485480 GGAACCTAGTCTTACCCCTGC 59.515 57.143 0.00 0.00 0.00 4.85
2486 2595 3.117552 AGGAACCTAGTCTTACCCCTG 57.882 52.381 0.00 0.00 0.00 4.45
2487 2596 6.618836 TTATAGGAACCTAGTCTTACCCCT 57.381 41.667 6.72 0.00 31.45 4.79
2488 2597 6.440010 GGATTATAGGAACCTAGTCTTACCCC 59.560 46.154 6.72 0.00 31.45 4.95
2489 2598 6.440010 GGGATTATAGGAACCTAGTCTTACCC 59.560 46.154 6.72 9.62 31.45 3.69
2490 2599 7.247500 AGGGATTATAGGAACCTAGTCTTACC 58.753 42.308 6.72 4.95 31.45 2.85
2491 2600 7.396907 GGAGGGATTATAGGAACCTAGTCTTAC 59.603 44.444 6.72 0.00 31.45 2.34
2492 2601 7.477008 GGAGGGATTATAGGAACCTAGTCTTA 58.523 42.308 6.72 0.00 31.45 2.10
2493 2602 6.324544 GGAGGGATTATAGGAACCTAGTCTT 58.675 44.000 6.72 0.00 31.45 3.01
2494 2603 5.222589 GGGAGGGATTATAGGAACCTAGTCT 60.223 48.000 6.72 0.00 31.45 3.24
2495 2604 5.024785 GGGAGGGATTATAGGAACCTAGTC 58.975 50.000 6.72 4.93 31.45 2.59
2496 2605 4.202912 GGGGAGGGATTATAGGAACCTAGT 60.203 50.000 6.72 0.00 31.45 2.57
2497 2606 4.202901 TGGGGAGGGATTATAGGAACCTAG 60.203 50.000 6.72 0.00 31.45 3.02
2498 2607 3.741438 TGGGGAGGGATTATAGGAACCTA 59.259 47.826 2.93 2.93 0.00 3.08
2499 2608 2.531463 TGGGGAGGGATTATAGGAACCT 59.469 50.000 0.00 0.00 0.00 3.50
2500 2609 2.913617 CTGGGGAGGGATTATAGGAACC 59.086 54.545 0.00 0.00 0.00 3.62
2501 2610 3.583526 GTCTGGGGAGGGATTATAGGAAC 59.416 52.174 0.00 0.00 0.00 3.62
2502 2611 3.441054 GGTCTGGGGAGGGATTATAGGAA 60.441 52.174 0.00 0.00 0.00 3.36
2503 2612 2.113777 GGTCTGGGGAGGGATTATAGGA 59.886 54.545 0.00 0.00 0.00 2.94
2504 2613 2.552367 GGTCTGGGGAGGGATTATAGG 58.448 57.143 0.00 0.00 0.00 2.57
2505 2614 2.552367 GGGTCTGGGGAGGGATTATAG 58.448 57.143 0.00 0.00 0.00 1.31
2506 2615 1.153565 GGGGTCTGGGGAGGGATTATA 59.846 57.143 0.00 0.00 0.00 0.98
2507 2616 0.103876 GGGGTCTGGGGAGGGATTAT 60.104 60.000 0.00 0.00 0.00 1.28
2508 2617 1.320512 GGGGTCTGGGGAGGGATTA 59.679 63.158 0.00 0.00 0.00 1.75
2509 2618 2.044620 GGGGTCTGGGGAGGGATT 59.955 66.667 0.00 0.00 0.00 3.01
2510 2619 3.300962 TGGGGTCTGGGGAGGGAT 61.301 66.667 0.00 0.00 0.00 3.85
2511 2620 4.348495 GTGGGGTCTGGGGAGGGA 62.348 72.222 0.00 0.00 0.00 4.20
2513 2622 3.891432 AAGGTGGGGTCTGGGGAGG 62.891 68.421 0.00 0.00 0.00 4.30
2514 2623 2.204151 AAGGTGGGGTCTGGGGAG 60.204 66.667 0.00 0.00 0.00 4.30
2515 2624 2.531685 CAAGGTGGGGTCTGGGGA 60.532 66.667 0.00 0.00 0.00 4.81
2516 2625 2.858974 ACAAGGTGGGGTCTGGGG 60.859 66.667 0.00 0.00 0.00 4.96
2517 2626 2.436109 CACAAGGTGGGGTCTGGG 59.564 66.667 0.00 0.00 0.00 4.45
2518 2627 1.228245 CACACAAGGTGGGGTCTGG 60.228 63.158 1.07 0.00 44.04 3.86
2519 2628 4.481195 CACACAAGGTGGGGTCTG 57.519 61.111 1.07 0.00 44.04 3.51
2527 2636 1.729586 TAGAAGCTCCCACACAAGGT 58.270 50.000 0.00 0.00 0.00 3.50
2528 2637 2.636830 CATAGAAGCTCCCACACAAGG 58.363 52.381 0.00 0.00 0.00 3.61
2529 2638 2.012673 GCATAGAAGCTCCCACACAAG 58.987 52.381 0.00 0.00 0.00 3.16
2530 2639 1.350684 TGCATAGAAGCTCCCACACAA 59.649 47.619 0.00 0.00 34.99 3.33
2531 2640 0.983467 TGCATAGAAGCTCCCACACA 59.017 50.000 0.00 0.00 34.99 3.72
2532 2641 1.065854 AGTGCATAGAAGCTCCCACAC 60.066 52.381 0.00 0.00 34.99 3.82
2533 2642 1.065926 CAGTGCATAGAAGCTCCCACA 60.066 52.381 0.00 0.00 34.99 4.17
2534 2643 1.661341 CAGTGCATAGAAGCTCCCAC 58.339 55.000 0.00 0.00 34.99 4.61
2535 2644 0.543277 CCAGTGCATAGAAGCTCCCA 59.457 55.000 0.00 0.00 34.99 4.37
2536 2645 0.179034 CCCAGTGCATAGAAGCTCCC 60.179 60.000 0.00 0.00 34.99 4.30
2537 2646 0.543749 ACCCAGTGCATAGAAGCTCC 59.456 55.000 0.00 0.00 34.99 4.70
2538 2647 1.484240 AGACCCAGTGCATAGAAGCTC 59.516 52.381 0.00 0.00 34.99 4.09
2539 2648 1.209019 CAGACCCAGTGCATAGAAGCT 59.791 52.381 0.00 0.00 34.99 3.74
2540 2649 1.065854 ACAGACCCAGTGCATAGAAGC 60.066 52.381 0.00 0.00 0.00 3.86
2541 2650 2.419297 GGACAGACCCAGTGCATAGAAG 60.419 54.545 0.00 0.00 0.00 2.85
2542 2651 1.555075 GGACAGACCCAGTGCATAGAA 59.445 52.381 0.00 0.00 0.00 2.10
2543 2652 1.195115 GGACAGACCCAGTGCATAGA 58.805 55.000 0.00 0.00 0.00 1.98
2544 2653 1.198713 AGGACAGACCCAGTGCATAG 58.801 55.000 0.00 0.00 40.05 2.23
2545 2654 1.656587 AAGGACAGACCCAGTGCATA 58.343 50.000 0.00 0.00 40.05 3.14
2546 2655 0.773644 AAAGGACAGACCCAGTGCAT 59.226 50.000 0.00 0.00 40.05 3.96
2547 2656 0.550914 AAAAGGACAGACCCAGTGCA 59.449 50.000 0.00 0.00 40.05 4.57
2548 2657 1.239347 GAAAAGGACAGACCCAGTGC 58.761 55.000 0.00 0.00 40.05 4.40
2549 2658 1.421646 AGGAAAAGGACAGACCCAGTG 59.578 52.381 0.00 0.00 40.05 3.66
2550 2659 1.821088 AGGAAAAGGACAGACCCAGT 58.179 50.000 0.00 0.00 40.05 4.00
2551 2660 2.106511 TGAAGGAAAAGGACAGACCCAG 59.893 50.000 0.00 0.00 40.05 4.45
2552 2661 2.131854 TGAAGGAAAAGGACAGACCCA 58.868 47.619 0.00 0.00 40.05 4.51
2553 2662 2.951229 TGAAGGAAAAGGACAGACCC 57.049 50.000 0.00 0.00 40.05 4.46
2554 2663 4.398319 TGAATGAAGGAAAAGGACAGACC 58.602 43.478 0.00 0.00 39.35 3.85
2555 2664 5.066593 ACTGAATGAAGGAAAAGGACAGAC 58.933 41.667 0.00 0.00 0.00 3.51
2556 2665 5.310409 ACTGAATGAAGGAAAAGGACAGA 57.690 39.130 0.00 0.00 0.00 3.41
2557 2666 5.300286 ACAACTGAATGAAGGAAAAGGACAG 59.700 40.000 0.00 0.00 0.00 3.51
2558 2667 5.200483 ACAACTGAATGAAGGAAAAGGACA 58.800 37.500 0.00 0.00 0.00 4.02
2559 2668 5.774498 ACAACTGAATGAAGGAAAAGGAC 57.226 39.130 0.00 0.00 0.00 3.85
2560 2669 6.129179 AGAACAACTGAATGAAGGAAAAGGA 58.871 36.000 0.00 0.00 0.00 3.36
2561 2670 6.396829 AGAACAACTGAATGAAGGAAAAGG 57.603 37.500 0.00 0.00 0.00 3.11
2562 2671 7.646922 CAGAAGAACAACTGAATGAAGGAAAAG 59.353 37.037 0.00 0.00 36.38 2.27
2563 2672 7.122650 ACAGAAGAACAACTGAATGAAGGAAAA 59.877 33.333 0.00 0.00 37.54 2.29
2564 2673 6.603201 ACAGAAGAACAACTGAATGAAGGAAA 59.397 34.615 0.00 0.00 37.54 3.13
2565 2674 6.122277 ACAGAAGAACAACTGAATGAAGGAA 58.878 36.000 0.00 0.00 37.54 3.36
2566 2675 5.684704 ACAGAAGAACAACTGAATGAAGGA 58.315 37.500 0.00 0.00 37.54 3.36
2567 2676 6.382869 AACAGAAGAACAACTGAATGAAGG 57.617 37.500 0.00 0.00 37.54 3.46
2568 2677 7.253422 ACAAACAGAAGAACAACTGAATGAAG 58.747 34.615 0.00 0.00 37.54 3.02
2569 2678 7.156876 ACAAACAGAAGAACAACTGAATGAA 57.843 32.000 0.00 0.00 37.54 2.57
2570 2679 6.757897 ACAAACAGAAGAACAACTGAATGA 57.242 33.333 0.00 0.00 37.54 2.57
2571 2680 8.344831 TGATACAAACAGAAGAACAACTGAATG 58.655 33.333 0.00 0.00 37.54 2.67
2572 2681 8.450578 TGATACAAACAGAAGAACAACTGAAT 57.549 30.769 0.00 0.00 37.54 2.57
2573 2682 7.857734 TGATACAAACAGAAGAACAACTGAA 57.142 32.000 0.00 0.00 37.54 3.02
2574 2683 8.450578 AATGATACAAACAGAAGAACAACTGA 57.549 30.769 0.00 0.00 37.54 3.41
2575 2684 8.562892 AGAATGATACAAACAGAAGAACAACTG 58.437 33.333 0.00 0.00 39.65 3.16
2576 2685 8.682936 AGAATGATACAAACAGAAGAACAACT 57.317 30.769 0.00 0.00 0.00 3.16
2577 2686 9.736023 AAAGAATGATACAAACAGAAGAACAAC 57.264 29.630 0.00 0.00 0.00 3.32
2592 2701 7.826690 TGCCTAACCAAAAGAAAGAATGATAC 58.173 34.615 0.00 0.00 0.00 2.24
2709 2818 7.213678 AGGATTCCTCACTATTTCGAGATTTC 58.786 38.462 0.00 0.00 0.00 2.17
2744 2853 2.890766 TTTCCTCGGGGTCAGCCAC 61.891 63.158 0.00 0.00 36.17 5.01
3009 3118 7.623630 ACCATAAGCTCACATGCATATGTATA 58.376 34.615 4.61 0.00 45.53 1.47
3035 3144 6.880822 GCAGTACGATCAGTAAAACATACA 57.119 37.500 0.00 0.00 37.02 2.29
3362 3471 4.398358 GCATGCTGGCATCATATATCTGTT 59.602 41.667 11.37 0.00 33.90 3.16
3401 3510 5.467705 CCAAGATTTTTCTTTCTGCAGAGG 58.532 41.667 17.43 13.76 0.00 3.69
3450 3559 2.401766 CCATCACTGCCGTTGCTCC 61.402 63.158 0.00 0.00 38.71 4.70
3457 3566 0.179037 ATGATCCACCATCACTGCCG 60.179 55.000 0.00 0.00 44.70 5.69
3522 3631 2.092323 GTGGCATCCAGAAAAGGGTAC 58.908 52.381 0.00 0.00 32.34 3.34
3523 3632 1.707989 TGTGGCATCCAGAAAAGGGTA 59.292 47.619 0.00 0.00 32.34 3.69
3533 3642 2.283101 GTGGGCTTGTGGCATCCA 60.283 61.111 0.00 0.00 44.01 3.41
3593 3702 4.080919 TCAATCCTCTTGTCGACCATCATT 60.081 41.667 14.12 1.18 0.00 2.57
3724 3833 5.604231 ACTGCTCAAGTATATCCAATCCTGA 59.396 40.000 0.00 0.00 37.36 3.86
3758 3868 2.353406 CGTAGATTTCGGTCCCAGTTGT 60.353 50.000 0.00 0.00 0.00 3.32
3767 3877 2.396590 ATTGTGGCGTAGATTTCGGT 57.603 45.000 0.00 0.00 0.00 4.69
3769 3879 2.159585 TGCAATTGTGGCGTAGATTTCG 60.160 45.455 7.40 0.00 0.00 3.46
3778 3888 2.580729 CACAAAATGCAATTGTGGCG 57.419 45.000 28.07 12.68 46.02 5.69
3800 3910 9.626045 GATTCATCAAATAAATACGAATTCCCC 57.374 33.333 0.00 0.00 0.00 4.81
4077 4187 1.067060 ACCGTGCTTTTTCTTGGAAGC 59.933 47.619 1.38 1.38 46.42 3.86
4078 4188 2.731217 CACCGTGCTTTTTCTTGGAAG 58.269 47.619 0.00 0.00 0.00 3.46
4079 4189 1.202359 GCACCGTGCTTTTTCTTGGAA 60.202 47.619 16.51 0.00 40.96 3.53
4080 4190 0.383949 GCACCGTGCTTTTTCTTGGA 59.616 50.000 16.51 0.00 40.96 3.53
4081 4191 2.885502 GCACCGTGCTTTTTCTTGG 58.114 52.632 16.51 0.00 40.96 3.61
4114 4224 0.575390 CTTAAATACAGCGACGCCGG 59.425 55.000 17.79 12.03 36.06 6.13
4115 4225 1.274596 ACTTAAATACAGCGACGCCG 58.725 50.000 17.79 9.27 39.16 6.46
4116 4226 3.734776 AAACTTAAATACAGCGACGCC 57.265 42.857 17.79 0.00 0.00 5.68
4117 4227 6.072733 TGTTTAAACTTAAATACAGCGACGC 58.927 36.000 18.72 13.03 35.35 5.19
4118 4228 8.649810 ATTGTTTAAACTTAAATACAGCGACG 57.350 30.769 18.72 0.00 35.35 5.12
4148 4258 9.228949 TGTTGTAAATAATAGCCCGTTTTTCTA 57.771 29.630 0.00 0.00 0.00 2.10
4149 4259 8.113173 TGTTGTAAATAATAGCCCGTTTTTCT 57.887 30.769 0.00 0.00 0.00 2.52
4150 4260 8.024865 ACTGTTGTAAATAATAGCCCGTTTTTC 58.975 33.333 0.00 0.00 0.00 2.29
4151 4261 7.888424 ACTGTTGTAAATAATAGCCCGTTTTT 58.112 30.769 0.00 0.00 0.00 1.94
4152 4262 7.457024 ACTGTTGTAAATAATAGCCCGTTTT 57.543 32.000 0.00 0.00 0.00 2.43
4153 4263 8.564509 TTACTGTTGTAAATAATAGCCCGTTT 57.435 30.769 0.00 0.00 35.90 3.60
4154 4264 8.564509 TTTACTGTTGTAAATAATAGCCCGTT 57.435 30.769 0.00 0.00 41.91 4.44
4229 4339 9.656323 ACAGTGAATAGAGGGAGTACAATATAA 57.344 33.333 0.00 0.00 0.00 0.98
4230 4340 9.656323 AACAGTGAATAGAGGGAGTACAATATA 57.344 33.333 0.00 0.00 0.00 0.86
4231 4341 8.554490 AACAGTGAATAGAGGGAGTACAATAT 57.446 34.615 0.00 0.00 0.00 1.28
4232 4342 7.973048 AACAGTGAATAGAGGGAGTACAATA 57.027 36.000 0.00 0.00 0.00 1.90
4233 4343 6.875972 AACAGTGAATAGAGGGAGTACAAT 57.124 37.500 0.00 0.00 0.00 2.71
4234 4344 7.973048 ATAACAGTGAATAGAGGGAGTACAA 57.027 36.000 0.00 0.00 0.00 2.41
4235 4345 9.132923 CTTATAACAGTGAATAGAGGGAGTACA 57.867 37.037 0.00 0.00 0.00 2.90
4236 4346 9.352191 TCTTATAACAGTGAATAGAGGGAGTAC 57.648 37.037 0.00 0.00 0.00 2.73
4238 4348 8.865090 CATCTTATAACAGTGAATAGAGGGAGT 58.135 37.037 0.00 0.00 0.00 3.85
4239 4349 8.865090 ACATCTTATAACAGTGAATAGAGGGAG 58.135 37.037 0.00 0.00 0.00 4.30
4240 4350 8.783660 ACATCTTATAACAGTGAATAGAGGGA 57.216 34.615 0.00 0.00 0.00 4.20
4241 4351 9.482627 GAACATCTTATAACAGTGAATAGAGGG 57.517 37.037 0.00 0.00 0.00 4.30
4291 4401 9.297586 CACACTAAAACACGTCTATACATACAT 57.702 33.333 0.00 0.00 0.00 2.29
4292 4402 8.298854 ACACACTAAAACACGTCTATACATACA 58.701 33.333 0.00 0.00 0.00 2.29
4293 4403 8.679288 ACACACTAAAACACGTCTATACATAC 57.321 34.615 0.00 0.00 0.00 2.39
4294 4404 9.695526 AAACACACTAAAACACGTCTATACATA 57.304 29.630 0.00 0.00 0.00 2.29
4295 4405 8.492748 CAAACACACTAAAACACGTCTATACAT 58.507 33.333 0.00 0.00 0.00 2.29
4296 4406 7.492020 ACAAACACACTAAAACACGTCTATACA 59.508 33.333 0.00 0.00 0.00 2.29
4297 4407 7.844482 ACAAACACACTAAAACACGTCTATAC 58.156 34.615 0.00 0.00 0.00 1.47
4298 4408 8.422973 AACAAACACACTAAAACACGTCTATA 57.577 30.769 0.00 0.00 0.00 1.31
4299 4409 6.913873 ACAAACACACTAAAACACGTCTAT 57.086 33.333 0.00 0.00 0.00 1.98
4300 4410 6.724694 AACAAACACACTAAAACACGTCTA 57.275 33.333 0.00 0.00 0.00 2.59
4301 4411 5.616488 AACAAACACACTAAAACACGTCT 57.384 34.783 0.00 0.00 0.00 4.18
4302 4412 7.017055 AGTAAACAAACACACTAAAACACGTC 58.983 34.615 0.00 0.00 0.00 4.34
4303 4413 6.901265 AGTAAACAAACACACTAAAACACGT 58.099 32.000 0.00 0.00 0.00 4.49
4304 4414 7.016466 TGAGTAAACAAACACACTAAAACACG 58.984 34.615 0.00 0.00 0.00 4.49
4305 4415 8.905103 ATGAGTAAACAAACACACTAAAACAC 57.095 30.769 0.00 0.00 0.00 3.32
4306 4416 9.915629 AAATGAGTAAACAAACACACTAAAACA 57.084 25.926 0.00 0.00 0.00 2.83
4309 4419 9.781834 CTGAAATGAGTAAACAAACACACTAAA 57.218 29.630 0.00 0.00 0.00 1.85
4310 4420 8.952278 ACTGAAATGAGTAAACAAACACACTAA 58.048 29.630 0.00 0.00 0.00 2.24
4311 4421 8.394877 CACTGAAATGAGTAAACAAACACACTA 58.605 33.333 0.00 0.00 0.00 2.74
4312 4422 7.094377 ACACTGAAATGAGTAAACAAACACACT 60.094 33.333 0.00 0.00 0.00 3.55
4313 4423 7.008266 CACACTGAAATGAGTAAACAAACACAC 59.992 37.037 0.00 0.00 0.00 3.82
4314 4424 7.026562 CACACTGAAATGAGTAAACAAACACA 58.973 34.615 0.00 0.00 0.00 3.72
4315 4425 6.020678 GCACACTGAAATGAGTAAACAAACAC 60.021 38.462 0.00 0.00 0.00 3.32
4316 4426 6.033341 GCACACTGAAATGAGTAAACAAACA 58.967 36.000 0.00 0.00 0.00 2.83
4317 4427 6.033341 TGCACACTGAAATGAGTAAACAAAC 58.967 36.000 0.00 0.00 0.00 2.93
4318 4428 6.201226 TGCACACTGAAATGAGTAAACAAA 57.799 33.333 0.00 0.00 0.00 2.83
4319 4429 5.826601 TGCACACTGAAATGAGTAAACAA 57.173 34.783 0.00 0.00 0.00 2.83
4320 4430 5.299028 ACATGCACACTGAAATGAGTAAACA 59.701 36.000 0.00 0.00 0.00 2.83
4321 4431 5.762045 ACATGCACACTGAAATGAGTAAAC 58.238 37.500 0.00 0.00 0.00 2.01
4322 4432 6.710295 ACTACATGCACACTGAAATGAGTAAA 59.290 34.615 0.00 0.00 0.00 2.01
4323 4433 6.230472 ACTACATGCACACTGAAATGAGTAA 58.770 36.000 0.00 0.00 0.00 2.24
4324 4434 5.793817 ACTACATGCACACTGAAATGAGTA 58.206 37.500 0.00 0.00 0.00 2.59
4325 4435 4.645535 ACTACATGCACACTGAAATGAGT 58.354 39.130 0.00 0.00 0.00 3.41
4326 4436 4.093998 GGACTACATGCACACTGAAATGAG 59.906 45.833 0.00 0.00 0.00 2.90
4327 4437 4.002982 GGACTACATGCACACTGAAATGA 58.997 43.478 0.00 0.00 0.00 2.57
4328 4438 3.752747 TGGACTACATGCACACTGAAATG 59.247 43.478 0.00 0.00 0.00 2.32
4329 4439 4.019792 TGGACTACATGCACACTGAAAT 57.980 40.909 0.00 0.00 0.00 2.17
4330 4440 3.483808 TGGACTACATGCACACTGAAA 57.516 42.857 0.00 0.00 0.00 2.69
4331 4441 3.701205 ATGGACTACATGCACACTGAA 57.299 42.857 0.00 0.00 38.70 3.02
4332 4442 5.357742 AATATGGACTACATGCACACTGA 57.642 39.130 0.00 0.00 40.82 3.41
4333 4443 7.552458 TTTAATATGGACTACATGCACACTG 57.448 36.000 0.00 0.00 40.82 3.66
4334 4444 8.574251 TTTTTAATATGGACTACATGCACACT 57.426 30.769 0.00 0.00 40.82 3.55
4362 4472 9.613428 CTGTTCACTATTATAGGATGTTTTGGA 57.387 33.333 4.15 0.00 0.00 3.53
4363 4473 9.613428 TCTGTTCACTATTATAGGATGTTTTGG 57.387 33.333 4.15 0.00 0.00 3.28
4365 4475 9.838339 CCTCTGTTCACTATTATAGGATGTTTT 57.162 33.333 4.15 0.00 0.00 2.43
4366 4476 8.432805 CCCTCTGTTCACTATTATAGGATGTTT 58.567 37.037 4.15 0.00 0.00 2.83
4367 4477 7.789831 TCCCTCTGTTCACTATTATAGGATGTT 59.210 37.037 4.15 0.00 0.00 2.71
4368 4478 7.306013 TCCCTCTGTTCACTATTATAGGATGT 58.694 38.462 4.15 0.00 0.00 3.06
4369 4479 7.453126 ACTCCCTCTGTTCACTATTATAGGATG 59.547 40.741 4.15 0.00 0.00 3.51
4370 4480 7.540183 ACTCCCTCTGTTCACTATTATAGGAT 58.460 38.462 4.15 0.00 0.00 3.24
4371 4481 6.923670 ACTCCCTCTGTTCACTATTATAGGA 58.076 40.000 4.15 0.00 0.00 2.94
4372 4482 8.164733 TCTACTCCCTCTGTTCACTATTATAGG 58.835 40.741 4.15 0.00 0.00 2.57
4373 4483 9.747898 ATCTACTCCCTCTGTTCACTATTATAG 57.252 37.037 0.00 0.00 0.00 1.31
4374 4484 9.521841 CATCTACTCCCTCTGTTCACTATTATA 57.478 37.037 0.00 0.00 0.00 0.98
4375 4485 7.039363 GCATCTACTCCCTCTGTTCACTATTAT 60.039 40.741 0.00 0.00 0.00 1.28
4376 4486 6.265649 GCATCTACTCCCTCTGTTCACTATTA 59.734 42.308 0.00 0.00 0.00 0.98
4377 4487 5.069781 GCATCTACTCCCTCTGTTCACTATT 59.930 44.000 0.00 0.00 0.00 1.73
4378 4488 4.586841 GCATCTACTCCCTCTGTTCACTAT 59.413 45.833 0.00 0.00 0.00 2.12
4379 4489 3.954904 GCATCTACTCCCTCTGTTCACTA 59.045 47.826 0.00 0.00 0.00 2.74
4380 4490 2.763448 GCATCTACTCCCTCTGTTCACT 59.237 50.000 0.00 0.00 0.00 3.41
4381 4491 2.763448 AGCATCTACTCCCTCTGTTCAC 59.237 50.000 0.00 0.00 0.00 3.18
4382 4492 3.107402 AGCATCTACTCCCTCTGTTCA 57.893 47.619 0.00 0.00 0.00 3.18
4383 4493 7.177568 TCAATATAGCATCTACTCCCTCTGTTC 59.822 40.741 0.00 0.00 0.00 3.18
4384 4494 7.013220 TCAATATAGCATCTACTCCCTCTGTT 58.987 38.462 0.00 0.00 0.00 3.16
4385 4495 6.556639 TCAATATAGCATCTACTCCCTCTGT 58.443 40.000 0.00 0.00 0.00 3.41
4386 4496 7.473735 TTCAATATAGCATCTACTCCCTCTG 57.526 40.000 0.00 0.00 0.00 3.35
4387 4497 8.121833 AGATTCAATATAGCATCTACTCCCTCT 58.878 37.037 0.00 0.00 0.00 3.69
4388 4498 8.305046 AGATTCAATATAGCATCTACTCCCTC 57.695 38.462 0.00 0.00 0.00 4.30
4389 4499 9.775539 TTAGATTCAATATAGCATCTACTCCCT 57.224 33.333 0.00 0.00 29.72 4.20
4442 4552 9.903682 CATCTGTTCAAAATTATGTGAAGTTCT 57.096 29.630 4.17 0.00 34.52 3.01
4443 4553 9.897744 TCATCTGTTCAAAATTATGTGAAGTTC 57.102 29.630 0.00 0.00 34.52 3.01
4445 4555 9.903682 CTTCATCTGTTCAAAATTATGTGAAGT 57.096 29.630 0.00 0.00 36.04 3.01
4446 4556 9.903682 ACTTCATCTGTTCAAAATTATGTGAAG 57.096 29.630 0.00 0.00 42.54 3.02
4454 4564 9.956720 CTTTGAGTACTTCATCTGTTCAAAATT 57.043 29.630 0.00 0.00 35.27 1.82
4455 4565 9.125026 ACTTTGAGTACTTCATCTGTTCAAAAT 57.875 29.630 0.00 0.00 35.27 1.82
4456 4566 8.397906 CACTTTGAGTACTTCATCTGTTCAAAA 58.602 33.333 0.00 0.00 35.27 2.44
4457 4567 7.768582 TCACTTTGAGTACTTCATCTGTTCAAA 59.231 33.333 0.00 0.00 35.27 2.69
4458 4568 7.224753 GTCACTTTGAGTACTTCATCTGTTCAA 59.775 37.037 0.00 0.00 35.27 2.69
4459 4569 6.701841 GTCACTTTGAGTACTTCATCTGTTCA 59.298 38.462 0.00 0.00 35.27 3.18
4460 4570 6.146347 GGTCACTTTGAGTACTTCATCTGTTC 59.854 42.308 0.00 0.00 35.27 3.18
4461 4571 5.992217 GGTCACTTTGAGTACTTCATCTGTT 59.008 40.000 0.00 0.00 35.27 3.16
4462 4572 5.070446 TGGTCACTTTGAGTACTTCATCTGT 59.930 40.000 0.00 0.00 35.27 3.41
4463 4573 5.541845 TGGTCACTTTGAGTACTTCATCTG 58.458 41.667 0.00 0.00 35.27 2.90
4464 4574 5.808366 TGGTCACTTTGAGTACTTCATCT 57.192 39.130 0.00 0.00 35.27 2.90
4465 4575 6.650807 TGATTGGTCACTTTGAGTACTTCATC 59.349 38.462 0.00 0.00 35.27 2.92
4466 4576 6.533730 TGATTGGTCACTTTGAGTACTTCAT 58.466 36.000 0.00 0.00 35.27 2.57
4467 4577 5.924356 TGATTGGTCACTTTGAGTACTTCA 58.076 37.500 0.00 0.00 0.00 3.02
4468 4578 6.621596 GCATGATTGGTCACTTTGAGTACTTC 60.622 42.308 0.00 0.00 37.14 3.01
4469 4579 5.182001 GCATGATTGGTCACTTTGAGTACTT 59.818 40.000 0.00 0.00 37.14 2.24
4470 4580 4.697352 GCATGATTGGTCACTTTGAGTACT 59.303 41.667 0.00 0.00 37.14 2.73
4471 4581 4.455533 TGCATGATTGGTCACTTTGAGTAC 59.544 41.667 0.00 0.00 37.14 2.73
4472 4582 4.455533 GTGCATGATTGGTCACTTTGAGTA 59.544 41.667 0.00 0.00 37.14 2.59
4473 4583 3.254166 GTGCATGATTGGTCACTTTGAGT 59.746 43.478 0.00 0.00 37.14 3.41
4474 4584 3.504906 AGTGCATGATTGGTCACTTTGAG 59.495 43.478 0.00 0.00 36.48 3.02
4475 4585 3.489355 AGTGCATGATTGGTCACTTTGA 58.511 40.909 0.00 0.00 36.48 2.69
4476 4586 3.928727 AGTGCATGATTGGTCACTTTG 57.071 42.857 0.00 0.00 36.48 2.77
4477 4587 5.824904 GATAGTGCATGATTGGTCACTTT 57.175 39.130 6.70 0.31 40.01 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.