>input_sequence_31885
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----------------------------------------------------------------------ATGGGCGGCG
GCGGCG------GCGGCAGCCCGACGGCGAGCAACAGCAGCAGCGACGATGACGGAGACGCCTCGTGGAGGGCGGCCATC
GACTCCGTCGCTGTAGGGGGCTTCGGCTACCCGTCGTCCAACGGCGCGGCGAAGGCCGCCTCTGGCGGCGT---CGGCGT
CGAGGAGGACAGCAACGGGCTGGAGCAGCCGCCGCAGGATGAGGGGAAGGCGCAAACGCCTGGGCTCAAGCTGTACCAGA
TCAAGGTGTCTTGCTTTCCACGTTCGCCCCTTGCTTTATGCTTGCTAGCTGCATAATA-------------T--------
-----------TCTTCTGCTCCTGATTCAGTGCCGCAGCTGCAGCTCATTGGTTGACATGGTCCTCGGTTTTGTTGTGCT
GATTCAGTGCTGTC-------------------TTCAAAGCTTGATGCATAC----TTCATTCTTCCTGTGGTCCTTGGA
CGAACTAGAATTAGCTGGTTCACTCGGATTAGTCTGGGTTTACATAGCAAGTTAGCAATAGCAGCTGCA--TTTGCTTCA
ATTGTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCAATATGGACTACATACGGAGCAAAATGAGTGAATC
TACACTCTAAAATACGTCTATATACATCCGTATGTAGTTCCTATTGAAATCTCTAAAAGGACTTACATTTAGAACGAGGA
GGGAGTATATTCGAGTGGGATATATCAGTGTTACCAGCGGATGCACATACTTAGCTACATTCTTGCAGAGTAGCTACGGT
TGGCAAATTGAGAAAACCCAACATGTTTCACCCCATAGACTGAAGTTGTGGATATAATCAA-TCATGTTCCACTCCATAT
AGGATGTGTACTGCACCATTGCCATTTTGGAGGTTTTCTCGCTGG---TTTG-ATAAAATGCCACAACTTACTATGCCGC
TACCCAGTAAAAATCAACTTTGTCAGTACCCAGTAAAAAC-----GAACTGGCTTTGCCACTAGGAAATAATGCCCCATC
TTGCATTGCAATCTATCCAATTCCCCTT-ATTGCTTTGACCTTTTGGTAGATGCTCCGTTCCATGTGTTAAATAATTTAC
GGTGGGCCTCCGGATCATCATATTAGTTTCCGTTGGTACCTGTCCAAGCCACAAAGTAAGTTCATCACTTGCATGATCGT
TTTAATATGCAGTAGTTTGCAAATACACCATGTGATTTACATTCTATGTCTACAGAATTCTGTACTGTTTACTTGCATGA
TCCTTTTCAGAATGTAGTAGTTCATCACTTCACCTGGCAAGCCTGATGAGCAACTAGAAAAAGCTGGCACAATGTTGCCA
TGTATTCACCATTCAGACCTGCCAGTCTGCAACTATAGTATAACCATTTCACTTAAACAGATTTTTCCTGTTTAAG-TTT
TTTTTTCTCTGCCCTTCATTCAGTTGTTCTTCTGTGCCTGGCGCAGTGGTGAAGTCCTCCCCACTTGTGCCAAGAGGTCC
TGGGTTCGAACCAGCCTCTCTGCATTGCACTTTGCAGGGGTAAGACTAGGTTCCTATAATCCCTCCCCAGACCCCACCTT
GTGTGGGAGCTTCTATGCACTGGGTCTGTCCTTTTCCTTCATTCAGTTGTTCTTCTGTTTGTATCATTCTTTCTTTTGGT
TAGGCATTAGGAAGTCATACTATGTTATGCATTATGATCTTACAAACTTCATTTGATTTGTTTCAGGTAAGAAATATGTT
GGACAATATGTTAGAGAGAAATCTCGAAATAGTGAGGAATCCTTGCTTGAACGTGGCTGACCCCGAGGAAACAGGGGGAG
GGATAAAGTTATTTAAAAAGGCACCTCCTGGCATCAGAATGGATGCCGTAGGTATGACGTGAATGTGATTATCTTTAATA
ATCTTGGTGGATAAATCCTTTCATGATGATAATACATATTCATACTAATGTTTATTTCTAGATAAATACCATGTGCAACT
CAAGAGACCAAAGATTCTTCCTGGGCCAGAGGTCGACGAGAAATCAAAGAAGGTTTGATATCTATTTTCACAATAATTAT
ACATATGCATGTGAGCTTATGGTTGTATGTTTTACTGATCGTACTGCGACCCTGATTTCAGTTCAGACATATGCTTCAGT
CTGTTGTTGTTGATGGTAACGACGTACTTGTTTCCGCGAAAGAAGCATCCCAAATATCATTGGCTAGAATGGAAGCTAGA
GAAACTGCAGCAAAGACCAAAGCCAAGAGGGAGGAAGAAAGGGTGAACCAGCTGAAGAAGGTCAGGGGAGAGAAATGGCT
TCCTTCCATTGCTAGTAAAATGAAGGTAAATAAATGCATACTTTAAATCACTCTTCAATGGCTAGTTTGGTGGGTTTGTT
GTTGTACAACATCGACCAACATTTTGTATTAACAGATATATGATGCCAGCATGCATTATGTTCATATTGCCTCTGCAGAA
AGAAAAATCTTGGGAGCAATGGCAGGAAAAAAAGCTCAGGAGCAACGGCAGTGATGGTGGATCATTTCAGCTGGGCCGCA
TATGCTAA------------------------------------------------------------------------
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-------------------------------------------------
>chr4A_1_TraesCS4A01G045300
CTTCTCAGCTCTCCTACCAATAAGTTATCCAAGAAGCAACT-CCTAGGCACTTACATCAAATCGAAGACGCTTCCATCTG
CCGTACACACCGGATCCTCAAATGGCAGGAACGTGAGCCTAATATCCAATGAAATGACAATCAGTGGCTGAAGAAGAGGG
ATTGACTTTACTTACTACTCCCTCCGTTCCAATATAGATGACCCAAATTTGTACTAACTTTAGTACAAAGTTAGTACAAA
GTTGAGTCATCTATTTTGGAACGGAGGGAGTAATCAACTGCTAATGTGGCTAAATTCGAATAGTATGAAGGTTCAACATC
CAGAGCTGAATTTGAGCATTTGGAGCTTACAAAGGTAACTAACTAGCTTAACTGGTGGCATATATACCAACTGAAATATC
CACAGAAAACAAGTTCATGCCCTAAGGAAGAAACCCTATAAGCTCAAGCTCTCC-GAAATTCGATTCAGAATCCTAAATT
ACCAAGAGAACAGAGGTAAGCAGGCAAATCTTCCAGCGAGGCTGGTGCGGGAACAGGGGAAGCGGGGAGGGAGAGTAGGC
AATTACGCGCAGCAGTAGAAGGGGAGGCGCTGGAATGGCGCGATGGCCTCCCTGTTCTTGGCGCCACCCCACTCTGTCGC
CCACTCCGTGGCCGTTATGAACATCCGGTCCTTGCTATGCTGCTTCTTCCCCATCTCCGACTACCCTATAAGCGCGGGCC
TCCGGCCGGTGGTGCGGTTGCCCTGCCGGGCGGTCGGGTTTCGCCGGCGGCGAGGTGGGACGGCGAGATTTGACGACCGC
AAGTGTT-GGGTCGGGGAAAGAGAAGGGAATAATAG-------------------GCGGCTCAGCCCGTGATAGAATA--
-----CACGGCTCGAGCCGCGCGGG-TCGGTGCGAAACAGATTCGGCCCGGCCCGGCCCAACCCAGCGCACAACCGGCCC
AAAAGCAGAGCGCAAGTGCGCACAGCGCACCACCGGCCGAGCGAGCTGAGTCGTCGATTCGAGCAGCGGGATGGGCGGCG
GCGGCG------GCGGCAGCCCGACGGCGAGCAACAGCAGCAGCGACGATGACGGAGACGCCTCGTGGAGGGCGGCCATC
GACTCCGTCGCTGTAGGGGGCTTCGGCTACCCGTCGTCCAACGGCGCGGCGAAGGCCGCCTCTGGCGGCGT---CGGCGT
CGAGGAGGACAGCAACGGGCTGGAGCAGCCGCCGCAGGATGAGGGGAAGGCGCAAACGCCTGGGCTCAAGCTGTACCAGA
TCAAGGTGTCTTGCTTTCCACGTTCGCCCCTTGCTTTATGCTTGCTAGCTGCATAATA-------------T--------
-----------TCTTCTGCTCCTGATTCAGTGCCGCAGCTGCAGCTCATTGGTTGACATGGTCCTCGGTTTTGTTGTGCT
GATTCAGTGCTGTC-------------------TTCAAAGCTTGATGCATAC----TTCATTCTTCCTGTGGTCCTTGGA
CGAACTAGAATTAGCTGGTTCACTCGGATTAGTCTGGGTTTACATAGCAAGTTAGCAATAGCAGCTGCA--TTTGCTTCA
ATTGTACTCCCTCCGTTCCTAAATATAAGTCTTTTTAGAGATTCCAATATGGACTACATACGGAGCAAAATGAGTGAATC
TACACTCTAAAATACGTCTATATACATCCGTATGTAGTTCCTATTGAAATCTCTAAAAGGACTTACATTTAGAACGAGGA
GGGAGTATATTCGAGTGGGATATATCAGTGTTACCAGCGGATGCACATACTTAGCTACATTCTTGCAGAGTAGCTACGGT
TGGCAAATTGAGAAAACCCAACATGTTTCACCCCATAGACTGAAGTTGTGGATATAATCAA-TCATGTTCCACTCCATAT
AGGATGTGTACTGCACCATTGCCATTTTGGAGGTTTTCTCGCTGG---TTTG-ATAAAATGCCACAACTTACTATGCCGC
TACCCAGTAAAAATCAACTTTGTCAGTACCCAGTAAAAAC-----GAACTGGCTTTGCCACTAGGAAATAATGCCCCATC
TTGCATTGCAATCTATCCAATTCCCCTT-ATTGCTTTGACCTTTTGGTAGATGCTCCGTTCCATGTGTTAAATAATTTAC
GGTGGGCCTCCGGATCATCATATTAGTTTCCGTTGGTACCTGTCCAAGCCACAAAGTAAGTTCATCACTTGCATGATCGT
TTTAATATGCAGTAGTTTGCAAATACACCATGTGATTTACATTCTATGTCTACAGAATTCTGTACTGTTTACTTGCATGA
TCCTTTTCAGAATGTAGTAGTTCATCACTTCACCTGGCAAGCCTGATGAGCAACTAGAAAAAGCTGGCACAATGTTGCCA
TGTATTCACCATTCAGACCTGCCAGTCTGCAACTATAGTATAACCATTTCACTTAAACAGATTTTTCCTGTTTAAG-TTT
TTTTTTCTCTGCCCTTCATTCAGTTGTTCTTCTGTGCCTGGCGCAGTGGTGAAGTCCTCCCCACTTGTGCCAAGAGGTCC
TGGGTTCGAACCAGCCTCTCTGCATTGCACTTTGCAGGGGTAAGACTAGGTTCCTATAATCCCTCCCCAGACCCCACCTT
GTGTGGGAGCTTCTATGCACTGGGTCTGTCCTTTTCCTTCATTCAGTTGTTCTTCTGTTTGTATCATTCTTTCTTTTGGT
TAGGCATTAGGAAGTCATACTATGTTATGCATTATGATCTTACAAACTTCATTTGATTTGTTTCAGGTAAGAAATATGTT
GGACAATATGTTAGAGAGAAATCTCGAAATAGTGAGGAATCCTTGCTTGAACGTGGCTGACCCCGAGGAAACAGGGGGAG
GGATAAAGTTATTTAAAAAGGCACCTCCTGGCATCAGAATGGATGCCGTAGGTATGACGTGAATGTGATTATCTTTAATA
ATCTTGGTGGATAAATCCTTTCATGATGATAATACATATTCATACTAATGTTTATTTCTAGATAAATACCATGTGCAACT
CAAGAGACCAAAGATTCTTCCTGGGCCAGAGGTCGACGAGAAATCAAAGAAGGTTTGATATCTATTTTCACAATAATTAT
ACATATGCATGTGAGCTTATGGTTGTATGTTTTACTGATCGTACTGCGACCCTGATTTCAGTTCAGACATATGCTTCAGT
CTGTTGTTGTTGATGGTAACGACGTACTTGTTTCCGCGAAAGAAGCATCCCAAATATCATTGGCTAGAATGGAAGCTAGA
GAAACTGCAGCAAAGACCAAAGCCAAGAGGGAGGAAGAAAGGGTGAACCAGCTGAAGAAGGTCAGGGGAGAGAAATGGCT
TCCTTCCATTGCTAGTAAAATGAAGGTAAATAAATGCATACTTTAAATCACTCTTCAATGGCTAGTTTGGTGGGTTTGTT
GTTGTACAACATCGACCAACATTTTGTATTAACAGATATATGATGCCAGCATGCATTATGTTCATATTGCCTCTGCAGAA
AGAAAAATCTTGGGAGCAATGGCAGGAAAAAAAGCTCAGGAGCAACGGCAGTGATGGTGGATCATTTCAGCTGGGCCGCA
TATGCTAATCTTTTAGGCCATCTATGGGGGGTACCCTTTTCTGGATGCCACAAGCCCACAATTGCTTTGATAACTTCTAT
TTTGCCATTTATCCATTTGGCAATGATGGTCGACAAGAGGATTGAATTGGATGAAAAGATAGAATGTTGGACTGACGATT
TTGTTCTAATCTAGAGAACGTAGCTTATCAGTACCTTCTCATGGAATTTTTGTAGCAAAATTATGTTATATTTCAGGATT
GGATATACTTGAG-CAGTCTCTGCCTCACAACTGGGACCGAAATCTACGCCACAATTGCATTTTGTGTGGGGGAATTCGT
ATTTATTTGATGAATCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGATGCTTCCAAGAAAAAGCACGGTGCTTGCCGGCGTCGCACCGGCGTCGCTGTATTT
AAGTTTAAACAATTATATAGAAAAACGGGCTATTATTTACAACAGTAAATAGTATATAGATTGTGAAAATGTATGTTTAT
GAAGAATTTTAATGAATCTTATATTGTACTCCCTCTATTCACTGTTATAAGATGTTCTAACTTTTTTCTAAATTGAATGT
ATGTATGTATAGACGTGTTTTAGTGTGTTTGTTTACTCATTTCAGTGTGCATGTAGTCCATATTAAAAATATCCAAAACA
TCCTATAATAGTGAACAGAGGGAGTAGATGCTATATTGAATCTAAAATAAGTTTGACTTAGGAAAAAAAAAAGAACTTCA
CATAATTTTGAACAGATGAAGTACTCAAAGTGACCAATCATGCACTATC
>chr4B_1
CTTCTCAGCTCTCCTACCACTAAGTTATCCAAGAAGCAACTCCTAC-GCACTTACATCAAATCGAAGACGCTTCCATCTG
CCGTACACACCGGATCCTCAAATGGCAAGAACGTGAGCCTAATATCCAACGAAATGACAATCAGTGGCTGAAGAAGAGGG
ATTGACTTTACTTAC-----------------------------------------------------------------
------------------------------TAATCAACTGCTAATGTGGCTAAGTTCGAGTCGTATGAAGGTTCAGTATC
CAGAGCTGAATTTGAGCATTTGGAGCTTACAAAGGTAACTAACTAGCTTAACTAGTGGCATATA--CCAACTAAAAGATC
CACAAAAAACAAGTCCATGCCCTAAGGAATAAACCCTATAAGCTCAAGCTCTCCCGAAATTCGAATCAGAATCCTAAATT
GCCAAGAGAACAGAGGTAAGCAGGCAAATCTTCCAGCAAGGCTGGTGAGGGAACATGGGAAGCAGGGAGAGAGAGTAGGT
AATTACGCGCAGCAGTAGAAGGGGAGGCGCTGGAATGGCGCGATGGCCTCCCTGTTCTTGGCGCCGCCCCACTCTGTCGC
CCACTCCGTGGCAGTTATGAACATCCGGTCCTTGCTATGCTGCTTCTTCCCCATCTCCGACTATCCTACAAGCGCGGGCC
TCCGGCCGGTGGTGCGGTTGCCCTGCCGGGCGGTCGGGTTTCGCCGGCGGCGAGGTGGGACGGCGAGATTTGACGACCGC
AAGTGTTGGGGTCGGGGAAAGAGAAGGGAATAGTAGGCGGCTGGCCTATTCGTCAGCGGCTCAGCCCGTGATAGAATAGA
ACAAACACGGCTCGAGCCGCGGGGGGTCGGTGCGAAACAGGTTAGGCCCGGCCCAGCCCAACCCAGAACAGAAGTGGCCC
AGAAGCAGAGCGAAAGT-------GCGCACCACCGGCCGAGCGAGCTGAGTCG---ATTCGAGCAGCAGGATGGGCGGCG
GTGGCG------GCGGCAGCCCGACGGCGAG---CAGCAGCAGCGACGATGACGGAGACGCCTCGTGGAGGGCGGCCATC
GACTCCGTCGCTGTAGGTGGCTTCGGCTACCCGTCGTCCAACGGCGCGGCGGAGGCCACCTCTGGCGGCGG---CGGCGT
CGAGGAGGACAGCAACGGGCTGGAGCAGCCGCCGCAGGATGAGGGGAAGGCGCAAACGCCTGGGCTCAAGCTGTACCAGA
TCAAGGTATCTTGCTCCACACTTTCGCCCCTTGCTTTATGCTTGCTAGCTGCATAATA-------------TCAGGCGCA
AAGCTT-GGTTTCTTCTGCTCCTAATTCTGT------GCTGCAGCTCATTGG-TG-CATGGTCTGTGGTTTTGTTGTTCT
AATTCAGTGCTGTTAGGAC------GTACTGTCTTCAAAGCTTGATGCATACGTACTTCATTCGTCCAGTGGTCCGTGGA
CGAACTAGAATTAGCTGGTTCACTCGGATTACTCTGGGTTAACATAGTAAGTTAGCAATAGCAGCTGCA--TTTGCTTCA
GTTGAACT------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GTATGTTCGAGTGAGATATATCAGTGTTACCAGCGGATGCACATACGTAGCTACACTCTTGCAGAGTAGCTACGGT
TGGTAAATTGAGAAAACCCATCATGTTTCACCCCATAGACTGAAATTTTGGATATAATCAA-TCATGTTCCCCTCCATAT
AGGATGTGTACTGCACCACTGCCATTTTGGAGGTTTTCTAGCTGGCTGTTTTCATAAAATGCCACAACTTACTATGCCGC
TACCCAGTAAAAATCAACTTTGTCAGTACCCAGTAAAAAC-----GAACTTGCTTTGCCACTAGGAAATAATGCCCCATC
TTGCATTGCAATCGATCCAATTCCCCTTTATTGCTTTCACCTTTTGGTAGATGCCCCGTTCCATATGTTAAATAATTTCC
GGTGGACCTCCAGATCATCGTATTAGTTTCTGTTGGTACCTGTCCCAGCCACAAAGTAAGTTCATCACTTGCATGATCCT
TTTAATATGCAGTAGTTTGCAAATACACCATGTGATTTACATTCTACATCTACAGAATTCTGTACTGATTACTTGCATGA
TTC-TTTCAGAATGTAGTAGTTCATCACTTCACCTGGCAAGCCTGATGAGCAACTAGAAAAAGCTGGCACAATGTTGCCC
TGTATTCACCATTCAGACCTGCCAGTTTACAACTATAGTATAACCATTTCACTTAAACAAAATTTTCCTGTTTAAG-TTT
TTTTTTCTCTGCCCTTCATTCAG---------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTGTTCTTCTGTTTATATCATTCTTTCTTTTGGT
TAGGCATTAGGAAGTCATACTATGTTATGCATTATGATCTTACAAACTTCATTTGATTTGTTTCAGGTAAGAAATATGTT
GGACGATATGTTAGAGAAAAATCTCGAAATAGTGAGGAATCCTTGCTTGAACTTGGCTGACCCCGAGGAAACAGGGGGAG
GGATAAAGTTATTTAAAAAGGCACCTCCTGGCATCAGAATGGATGCCGTAGGTATGTCGTGAATGTGATTATCTTTAATA
ATCTTGGTGGATAAATCCTTTCATGATGATAATACATATTCATACTAATGTTTATTTCTAGATAAATACCATGTGCAACT
CAAGAGACCAAAGATTCTTCCTGGGCCAGAGGTCGACGAGAAATCAAAGAAGGTTTGATATCTATTTTCACAATAATCAT
ACATATGCATGTGAGCTTATGGTCGTATGTTTTACTGATTGTACTGCGACCCTGATTTCAGTTCAGACATATGCTTCAGT
CTGTTGTTGTTGATGGTAACGACGTACTTGTTTCCGCGAAAGAAGCATCCCAAATATCATTGGCTAGAATGGAAGCTAGA
GAAACTGCAGCAAAGACCAAAGCCAAGAGGGAGGAAGAAAGGGTGAACCAGCTGAAGAAGGTCAGGGGAGAGAAATGGCT
TCCTTCCATTGCTAGTAAAATGAAGGTAAATAAGTGCATACTTTAAATCACTCTTCAATGGCTAGTTTGGTGG-TTTGTT
GTTGTACAACATCGACCAATATTTTGTATTGACAGATATATGATGCCAGCATGCATTATGTTCATATTGTCTCTGCAGAA
AGAAAAATCTTGGGAGCAATGGCAGGAAAAAAAGCTCAAGAGCAATGGCAGTGATGGTGGATCATTTCAGCTGGGCCGCA
TATGCTAATCTTTTAGGCCATCTATGGGGGC-ACCCTTTTCCGGATGCCACAAGCCCACAATTGCTTTGATAACTTCTAT
TTTGCCATTTATCCATTTGGCGATGATGGTCGACAAGAGGATTGAATTGGATGAAAAGATAGAATGTTGGACTGACGATT
TTGTTCTAATCTAGAGAACGTAGCTTATCAGTACCATCTCATGGAATTTTTGTAGCAAAATTATGTTATGTTCCAGGATT
GGATATACTTGAGCCAGTCTCTGCCTCGCAACTGGGGCTGAAATCTAAGCCACAATTGCATTTTGTGTGTGG--------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
>chr4D_1
CTTGTCAGCTCTCCTACCAATAAGTTATCCAAAGAAGAACAACCTAAGCACTTACATCAAATCGAAGACGCTTCCATCTG
CCGTACACACCGGATCCTCAAATGGCAAGAACGTGAGCCTAATATCCAATGAAATGATAATCAGTGGCTGAAGAAGAGGG
ATTAACTTTACTTAC-----------------------------------------------------------------
------------------------------TAATCAACTGCTAATGTGGCTAAATTCGAATCGTATGAAGGT-CAATATC
CAGAGCTGAATTTGAGCATTTGGAGCTTACAAAGGTAACTAACTAGCTTAACTAGTGGCATATA--CCAACTAAAAGATC
CACAAAAAATAAGTTCATGCCCTAAGGAAGAAACCCTATAAGCTCAAGCTCTCCCGAAATTCGAATCAGAATCCTAAATT
ACCAAGAGAACAGAAGTAAGCAGGCAAATCTTCCAGCAAGGCTGGTGCGGGAACAGGGGAAGCGGGCAGGGAGAGTAGGC
AATTACGCGCAGCAGTAGAAGGGGAGGCGCTGGAATGGCGCGATGGCCTCCCTGTTCTTGGCGCCGCCCCACTCTGTCGC
CCACTCCGTGGCAGTTATGAACATCCGGTCCTTGCTATGCTGCTTCTTCCCCATCTCCGACTATCCTACAAGCGCGGGCC
TCCGGCCGGTGGTGCGGTTGCCCTGCCGGGCGGTCGGGTTTCGCCGGCGGCGAGGTGGGACGGCGAGATTTGACGACCGC
AAGTGTTGGGGTCGGGGAAAGAGAAGGGAATAGTAGGCGGCTGGCCTATTCGTCAGCGGCTCAGCCCGTGATAGAATAGA
ACGAACACGGCTCGAGCCGCGGGGG-TCGGTGCGAAACAGGTTAGGCCCGGCCCAGCTCAACCCAGAGCACAACCGGCCC
AAAAGCAGAGCGCAAGT-------GCGCACCACCGGCCGAGCGAGCTGAGTCG---ATTCGAGCAGCAGGATGGGCGGCG
GCGGCGGCAGCAGCGGCAGCCCGACGGCGAG---CAGCAGCAGCGACGATGACGGAGACGCCTCGTGGAGGGCGGCCATC
GACTCTGTAGCTGTAGGGGGCTTCGGCTACCCGTCGTCCAACGGCGCGGCGAAGGCCGCCTCTGGCGGCGGCGGCGGCGT
CGAGGAGGACAGCAACGGGCTGGAGCAGCCGCCGCAGGATGAGAAGAAGGCGCAAACGCCTGGGCTCAAGCTGTACCAGA
TCAAGGTATCTTGCTTTCCACGTTCGCCCCTTGCTTTAGGCTTGCTAGCTGCATAATA-------------TCAGGCGCA
AAGCTTTGGTTTCTTCTGCTCCTAAATCAGT------GCTGCAGCTCATTGCTTGACATGGTCTTTGGTTTTGTTGTTCT
AATTCAGTGCTGTT-------------------TTCAAAGCTTGATGCATAC----TTCATTCGTCCTGTGGTCCGTGGA
CGAACTAGAATTAGCTGGTTCACCCGGATTAGTCTGGGTTAACATAGTGAGTTAGCAATAGCAACTGCATTTTTGCTTCA
AATGTACT------------------------------------------------------------------------
--------------------------------------------------------------------------------
----GTATCTTCGGGTGAAATATATCAGTGTTACCAGCGGATGCACATAAGTAGCTACACTCTTGCAGAGTAGCTATGGT
TGGTAAATTGAGAAAACCCATCATGTT--ACCCCATAGACTGAAGTTTTGGATATAATCAA-TCATGTTCCACTCCATAT
AGGATGTGTACTGCACCATTGCCATTTTGGAGGTTTTCTCGCTTGTTGTTTG-ATAAAATGCCACAACTTACTATGCCGC
CACCCAGTAAAAATCAATTTTGTCAGTACCCAGTAAAATAAAAATGAACTTGCTTTGCCGCTAGGAAATAATGTCCCATC
TTGCATTGCAATCGATCCAATTCCCCTT-ATTGCTTTCACCTTTTGGTAGATGCCCCGTTCCATATGTTAAATAATTTCC
GGTGGGCCTCCAGATCATCGTATTAGTTTCTGTTGGTACCTGTCCCAGCCACAAAGTAAGTTCATCACTTGCATGATCCT
TTTAATATGCAGTAGTTTGCAATTACACCATGTGATTTACATTCTACATCTACAGAATTCTGTACCGTTTACTTGCATGA
TCC-TTTCAGAATGTAGTAGTTCATCACTTCACCTGGCAAGCCTGATGAGCAACTGGAAAAAGCTGGCACAATGTTGCCC
TGTATTCACCATTCAGACCTGCCAGTTTACAACTATAGTATAACCATTTCACTTAAACAAAATTTTCCTGTTTAAGTTTT
TTTTTTCTCTGCCCTTCATTCAG---------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------TTGTTCTTCTGTTTATATCATTCTTTCTTTTGGT
TAGGCATTAGGAAGTCATACTATGTTATGCATTATGATCTTACAAACTTCATTTGATTTGTTTCAGGTAAGAAATATGTT
GGACGATATGTTAGAGAAAAATCTCGAAATAGTGAGGAATCCTTGCTTGAACTTGGCTGACCCCGAGGAAACAGGGGGAG
GGATAAAGTTATTTAAAAAGGCACCTCCTGGCATCAGAATGGATGCCGTAGGTATGTCGTGAATGTGATTATCTTTAATA
ATCTTGGTGGATAAATCCTTTCATGATGATAATACATATTCATGCTAATGTTTATTTCTAGATAAATACCATGTGCAACT
CAAGAGACCAAAGATTCTTCCTGGGCCAGAGGTCGACGAGAAATCAAAGAAGGTTTGATATCTATTTTCACAATAATCAT
ACATATGCATGTGAGCTTATGGTCGTATGTTTTACTTATCGTACTGCGACCCTGATTTCAGTTCAGACATATGCTTCAGT
CTGTTGTTGTTGATGGTAACGACGTACTTGTTTCCGCGAAAGAAGCATCCCAAATATCATTGGCTAGAATGGAAGCTAGA
GAAACTGCAGCAAAGACCAAAGCCAAGAGGGAGGAAGAAAGGGTGAACCAGCTGAAGAAGGTCAGGGGAGAGAAATGGCT
TCCTTCCATTGCTAGTAAAATGAAGGTAAATAAGTGCATACTTTAAATCACTCTTCAACGGCTAGTTTGGTGG-TTTGTT
GTTGTACAACATCGACCAACATTTTGTATTGACAGATATATGATGCCAGCATGCATTATGTTCATATTGTCTCTGCAGAA
AGAAAAATCTTGGGAGCAATGGCAGGAAAAAAAGCTCAAGAGCAATGGCAGTAATGGTGGATCATTTCAGCTGGGCCGCA
TATGCTAATCTTTTAGGCCATCTATGGGGGC-ACCCTTTTCCGGACGCCACAAGCCCACAATTGCTTTGATAACTTCTAT
TTTGCCATTTATCCATTTGACGATGATGGTCGACAAGAGGATTGAATTGGATGAAAAGATAGAATGTTGGACTGACGATT
TTGTTCTAATCTAGAGAACGTAGCTTATCAGTACCTTCTC----AATTTTTGTAGCAAAATTATGTTATATTCCAGGATT
GATACG-CTTGAG-CAGTCTCTGCCTCGCAACTGGGGCTGAAATCTAAGCC-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>chr3B_1091
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTCGCTGTAGGTGGGTTCGGCTCCCCGTAGTCCAATGGCACGGCGAAGGCCACCTCTGGCAGCGGCGGTT---T
CTAGGAGGAGAGTAGCGGGCTGGAGAAGCCACCACAGGATGAGGGGAAGGCGCAAACACCTGGGCTCAAGCTGTACTAGA
TCAAGGTATCTTGCTTTCCATGTTCGCCCCTTGCTTTATGCTTGCTAGCTGCATCTGGCGCAAAGCTTGGTT--------
-----------TCTTCTACTCCAAATTCAGTGCCGCAGTTGCAGCTCATTGATTG-CATGGTCTTCGGTATTGTTATGCT
GATTCGGTGTTGTAGGATGTACATAGTACTGTCTTCAAACCTTGATGCATTC----TCGC--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------TGGATATAATCAAATCAAGTTGCACTCCATAT
AGGTTGTGTACTGCACCATTGCTATTTTGGAGGTTTTCTCGCTGGCTGTTTTTTTTAAATGCCGCAACTTACTATGCCGC
TACCTAGTAAAAACCAACTTTGTCAGTACCCAGTAAAAAC-----GAACCTGCTTTGCCACTAGCAAATAATGGACCATA
TTGCCTTGCAATTGATCCAATTCCCCTT----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
>SNPs
----------------------------------------------S---------------------------------
---------------------------S----------------------------------------------------
---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------S--------------S---
-----------------------------------------------------S----------SS------S---S---
----S-----------------------------------------------------------S---------------
-------------------------------------S------------------------------------------
-----------------------------------------------------------------S--------------
------------S--------------------------------------------------S----S-----------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
---------------------S------------------S--S----------S-----------S-------------
-----------------SSSSSSS-----------------------------SSS-----------S------------
-------------------------------SSS----------------------------------------------
----------------------------------------------------------------------S---------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
-----------------------S---------------------------------------S----------------
-------------S-------------------------------------------------S-----------S----
----------------------------------------S------S--------------------------------
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS----S--------S--------------------------------S--------S--------------------
---S----------------S--------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S-----------------------------
-------------S-----------------------S----------------S---------S-------------S-
-----------S-------S----------S--------------S--------------------------------S-
----------------------------------------------SS--------------------------------
---S---------------------------------------------------------------------------S
--------------------------S-S------------------------------S-S------------------
-----------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------S-------------------
--------------------------------------------------------------------------------
----S------------S----------------------------------S---------------------------
--------------------------------------------------------S-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S---------------------------------------S------
------------------------------S--------------------------------------S----------
--------------------------------------S------S----------------------------------
------------------------------SS---------S--------------------------------------
---------------------S----------------------------------------------------------
------------------------------------------------------------------------S-------
---------------------------S--------S-S--------S---------------------S--SSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_108
--------------------------------------------------------------------------------
--------ACCGGATCCTCAAATGGCAG----------------------------------------------------
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>reverse_1288
--------------------------------------------------------------------------------
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-------GTCTTGCTTTCCACGTTCGC-----------------------------------------------------
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-------------------------------------------------
>forward_924
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------------------------GGTCGGTGCGAAACAGATTC------------------------------------
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-------------------------------------------------
>reverse_2573
--------------------------------------------------------------------------------
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------------AGCCTCTCTGCATTGCACTT------------------------------------------------
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>forward_2547
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-----------------------------------------------GGTGAAGTCCTCCCCACTTG-------------
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>reverse_3566
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---------------------------------------------CGGCAGTGATGGTGGATCAT---------------
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-------------------------------------------------
>forward_2592
--------------------------------------------------------------------------------
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------------AGCCTCTCTGCATTGCACTT------------------------------------------------
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-------------------------------------------------
>reverse_4190
--------------------------------------------------------------------------------
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-----------------------------TCCAAGAAAAAGCACGGTGC-------------------------------
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-------------------------------------------------
