Multiple sequence alignment - TraesCS4A01G023700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G023700 chr4A 100.000 4543 0 0 1 4543 16964520 16969062 0.000000e+00 8390.0
1 TraesCS4A01G023700 chr4A 82.143 224 22 3 3012 3217 16967291 16967514 4.670000e-40 176.0
2 TraesCS4A01G023700 chr4A 82.143 224 22 3 2772 2995 16967531 16967736 4.670000e-40 176.0
3 TraesCS4A01G023700 chr4B 92.982 4246 185 36 242 4467 562712424 562708272 0.000000e+00 6085.0
4 TraesCS4A01G023700 chr4B 89.264 326 35 0 2892 3217 562709955 562709630 4.230000e-110 409.0
5 TraesCS4A01G023700 chr4B 82.319 345 25 12 2772 3116 562709835 562709527 2.690000e-67 267.0
6 TraesCS4A01G023700 chr4B 84.000 225 18 3 2772 2996 562709733 562709527 2.770000e-47 200.0
7 TraesCS4A01G023700 chr4D 92.007 3015 133 20 116 3116 449985652 449982732 0.000000e+00 4133.0
8 TraesCS4A01G023700 chr4D 92.399 1592 83 10 2892 4467 449983040 449981471 0.000000e+00 2235.0
9 TraesCS4A01G023700 chr4D 82.883 222 20 3 2775 2996 449982935 449982732 2.790000e-42 183.0
10 TraesCS4A01G023700 chr4D 84.762 105 16 0 2772 2876 449982836 449982732 6.220000e-19 106.0
11 TraesCS4A01G023700 chr4D 83.036 112 9 5 244 347 450017351 450017242 4.840000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G023700 chr4A 16964520 16969062 4542 False 2914.00 8390 88.095333 1 4543 3 chr4A.!!$F1 4542
1 TraesCS4A01G023700 chr4B 562708272 562712424 4152 True 1740.25 6085 87.141250 242 4467 4 chr4B.!!$R1 4225
2 TraesCS4A01G023700 chr4D 449981471 449985652 4181 True 1664.25 4133 88.012750 116 4467 4 chr4D.!!$R2 4351

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
87 88 0.181350 TGTGTGTGTGTATGTGGGCA 59.819 50.0 0.00 0.00 0.00 5.36 F
1648 1654 0.182061 AGATGATGATGTTGGCGGCT 59.818 50.0 11.43 0.00 0.00 5.52 F
2927 2939 0.038744 AAGTGATGGACCTGGCCAAG 59.961 55.0 7.01 2.23 42.16 3.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1912 1918 0.178068 GGGCCTCGTTAGATGCAGAA 59.822 55.0 0.84 0.0 39.36 3.02 R
3177 3291 0.040958 CTGCGGCAACAGTGAACTTC 60.041 55.0 3.44 0.0 32.78 3.01 R
4263 4395 0.247736 CTTCTCCTGTTCCCCAGTCG 59.752 60.0 0.00 0.0 39.74 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 8.947055 AAAATATTGTATTGGTTTGGAGATGC 57.053 30.769 0.00 0.00 0.00 3.91
26 27 7.902920 AATATTGTATTGGTTTGGAGATGCT 57.097 32.000 0.00 0.00 0.00 3.79
27 28 5.841957 ATTGTATTGGTTTGGAGATGCTC 57.158 39.130 0.00 0.00 0.00 4.26
28 29 3.270027 TGTATTGGTTTGGAGATGCTCG 58.730 45.455 0.00 0.00 0.00 5.03
29 30 2.496899 ATTGGTTTGGAGATGCTCGT 57.503 45.000 0.00 0.00 0.00 4.18
30 31 3.627395 ATTGGTTTGGAGATGCTCGTA 57.373 42.857 0.00 0.00 0.00 3.43
31 32 2.672961 TGGTTTGGAGATGCTCGTAG 57.327 50.000 0.00 0.00 0.00 3.51
32 33 2.176045 TGGTTTGGAGATGCTCGTAGA 58.824 47.619 0.00 0.00 0.00 2.59
33 34 2.565391 TGGTTTGGAGATGCTCGTAGAA 59.435 45.455 0.00 0.00 34.09 2.10
34 35 3.007506 TGGTTTGGAGATGCTCGTAGAAA 59.992 43.478 0.00 0.00 34.09 2.52
35 36 4.192317 GGTTTGGAGATGCTCGTAGAAAT 58.808 43.478 0.00 0.00 34.09 2.17
36 37 5.105106 TGGTTTGGAGATGCTCGTAGAAATA 60.105 40.000 0.00 0.00 34.09 1.40
37 38 5.815740 GGTTTGGAGATGCTCGTAGAAATAA 59.184 40.000 0.00 0.00 34.09 1.40
38 39 6.483640 GGTTTGGAGATGCTCGTAGAAATAAT 59.516 38.462 0.00 0.00 34.09 1.28
39 40 7.348201 GTTTGGAGATGCTCGTAGAAATAATG 58.652 38.462 0.00 0.00 34.09 1.90
40 41 6.161855 TGGAGATGCTCGTAGAAATAATGT 57.838 37.500 0.00 0.00 34.09 2.71
41 42 5.985530 TGGAGATGCTCGTAGAAATAATGTG 59.014 40.000 0.00 0.00 34.09 3.21
42 43 5.986135 GGAGATGCTCGTAGAAATAATGTGT 59.014 40.000 0.00 0.00 34.09 3.72
43 44 6.074088 GGAGATGCTCGTAGAAATAATGTGTG 60.074 42.308 0.00 0.00 34.09 3.82
44 45 6.341316 AGATGCTCGTAGAAATAATGTGTGT 58.659 36.000 0.00 0.00 34.09 3.72
45 46 5.778161 TGCTCGTAGAAATAATGTGTGTG 57.222 39.130 0.00 0.00 34.09 3.82
46 47 5.234752 TGCTCGTAGAAATAATGTGTGTGT 58.765 37.500 0.00 0.00 34.09 3.72
47 48 5.120053 TGCTCGTAGAAATAATGTGTGTGTG 59.880 40.000 0.00 0.00 34.09 3.82
48 49 5.524511 TCGTAGAAATAATGTGTGTGTGC 57.475 39.130 0.00 0.00 0.00 4.57
49 50 4.090786 TCGTAGAAATAATGTGTGTGTGCG 59.909 41.667 0.00 0.00 0.00 5.34
50 51 3.201726 AGAAATAATGTGTGTGTGCGC 57.798 42.857 0.00 0.00 0.00 6.09
51 52 1.904412 GAAATAATGTGTGTGTGCGCG 59.096 47.619 0.00 0.00 0.00 6.86
52 53 0.871722 AATAATGTGTGTGTGCGCGT 59.128 45.000 8.43 0.00 0.00 6.01
53 54 0.871722 ATAATGTGTGTGTGCGCGTT 59.128 45.000 8.43 0.00 33.36 4.84
54 55 0.658368 TAATGTGTGTGTGCGCGTTT 59.342 45.000 8.43 0.00 31.51 3.60
55 56 0.658368 AATGTGTGTGTGCGCGTTTA 59.342 45.000 8.43 0.00 0.00 2.01
56 57 0.871722 ATGTGTGTGTGCGCGTTTAT 59.128 45.000 8.43 0.00 0.00 1.40
57 58 1.499049 TGTGTGTGTGCGCGTTTATA 58.501 45.000 8.43 0.00 0.00 0.98
58 59 1.865340 TGTGTGTGTGCGCGTTTATAA 59.135 42.857 8.43 0.00 0.00 0.98
59 60 2.287103 TGTGTGTGTGCGCGTTTATAAA 59.713 40.909 8.43 0.00 0.00 1.40
60 61 2.900046 GTGTGTGTGCGCGTTTATAAAG 59.100 45.455 8.43 0.00 0.00 1.85
61 62 2.801111 TGTGTGTGCGCGTTTATAAAGA 59.199 40.909 8.43 0.00 0.00 2.52
62 63 3.433957 TGTGTGTGCGCGTTTATAAAGAT 59.566 39.130 8.43 0.00 0.00 2.40
63 64 3.778718 GTGTGTGCGCGTTTATAAAGATG 59.221 43.478 8.43 0.00 0.00 2.90
64 65 3.680458 TGTGTGCGCGTTTATAAAGATGA 59.320 39.130 8.43 0.00 0.00 2.92
65 66 4.201676 TGTGTGCGCGTTTATAAAGATGAG 60.202 41.667 8.43 0.00 0.00 2.90
66 67 3.930229 TGTGCGCGTTTATAAAGATGAGT 59.070 39.130 8.43 0.00 0.00 3.41
67 68 5.005012 GTGTGCGCGTTTATAAAGATGAGTA 59.995 40.000 8.43 0.00 0.00 2.59
68 69 5.751509 TGTGCGCGTTTATAAAGATGAGTAT 59.248 36.000 8.43 0.00 0.00 2.12
69 70 6.065153 GTGCGCGTTTATAAAGATGAGTATG 58.935 40.000 8.43 0.00 0.00 2.39
70 71 5.751509 TGCGCGTTTATAAAGATGAGTATGT 59.248 36.000 8.43 0.00 0.00 2.29
71 72 6.065153 GCGCGTTTATAAAGATGAGTATGTG 58.935 40.000 8.43 0.00 0.00 3.21
72 73 6.292168 GCGCGTTTATAAAGATGAGTATGTGT 60.292 38.462 8.43 0.00 0.00 3.72
73 74 7.057402 CGCGTTTATAAAGATGAGTATGTGTG 58.943 38.462 0.00 0.00 0.00 3.82
74 75 7.253983 CGCGTTTATAAAGATGAGTATGTGTGT 60.254 37.037 0.00 0.00 0.00 3.72
75 76 7.846107 GCGTTTATAAAGATGAGTATGTGTGTG 59.154 37.037 0.00 0.00 0.00 3.82
76 77 8.869897 CGTTTATAAAGATGAGTATGTGTGTGT 58.130 33.333 0.00 0.00 0.00 3.72
77 78 9.973246 GTTTATAAAGATGAGTATGTGTGTGTG 57.027 33.333 0.00 0.00 0.00 3.82
78 79 9.719355 TTTATAAAGATGAGTATGTGTGTGTGT 57.281 29.630 0.00 0.00 0.00 3.72
81 82 7.601073 AAAGATGAGTATGTGTGTGTGTATG 57.399 36.000 0.00 0.00 0.00 2.39
82 83 6.286240 AGATGAGTATGTGTGTGTGTATGT 57.714 37.500 0.00 0.00 0.00 2.29
83 84 6.101997 AGATGAGTATGTGTGTGTGTATGTG 58.898 40.000 0.00 0.00 0.00 3.21
84 85 4.565022 TGAGTATGTGTGTGTGTATGTGG 58.435 43.478 0.00 0.00 0.00 4.17
85 86 3.932710 GAGTATGTGTGTGTGTATGTGGG 59.067 47.826 0.00 0.00 0.00 4.61
86 87 1.533625 ATGTGTGTGTGTATGTGGGC 58.466 50.000 0.00 0.00 0.00 5.36
87 88 0.181350 TGTGTGTGTGTATGTGGGCA 59.819 50.000 0.00 0.00 0.00 5.36
88 89 1.202867 TGTGTGTGTGTATGTGGGCAT 60.203 47.619 0.00 0.00 39.03 4.40
89 90 1.199789 GTGTGTGTGTATGTGGGCATG 59.800 52.381 0.00 0.00 36.58 4.06
90 91 1.202867 TGTGTGTGTATGTGGGCATGT 60.203 47.619 0.00 0.00 36.58 3.21
91 92 2.039084 TGTGTGTGTATGTGGGCATGTA 59.961 45.455 0.00 0.00 36.58 2.29
92 93 3.278574 GTGTGTGTATGTGGGCATGTAT 58.721 45.455 0.00 0.00 36.58 2.29
93 94 3.065233 GTGTGTGTATGTGGGCATGTATG 59.935 47.826 0.00 0.00 36.58 2.39
94 95 3.054802 TGTGTGTATGTGGGCATGTATGA 60.055 43.478 0.00 0.00 36.58 2.15
95 96 3.561310 GTGTGTATGTGGGCATGTATGAG 59.439 47.826 0.00 0.00 36.58 2.90
96 97 3.199727 TGTGTATGTGGGCATGTATGAGT 59.800 43.478 0.00 0.00 36.58 3.41
97 98 3.561310 GTGTATGTGGGCATGTATGAGTG 59.439 47.826 0.00 0.00 36.58 3.51
98 99 3.454082 TGTATGTGGGCATGTATGAGTGA 59.546 43.478 0.00 0.00 36.58 3.41
99 100 3.870538 ATGTGGGCATGTATGAGTGAT 57.129 42.857 0.00 0.00 33.37 3.06
100 101 3.198409 TGTGGGCATGTATGAGTGATC 57.802 47.619 0.00 0.00 0.00 2.92
101 102 2.138320 GTGGGCATGTATGAGTGATCG 58.862 52.381 0.00 0.00 0.00 3.69
102 103 1.070601 TGGGCATGTATGAGTGATCGG 59.929 52.381 0.00 0.00 0.00 4.18
103 104 1.344438 GGGCATGTATGAGTGATCGGA 59.656 52.381 0.00 0.00 0.00 4.55
104 105 2.611473 GGGCATGTATGAGTGATCGGAG 60.611 54.545 0.00 0.00 0.00 4.63
105 106 2.036475 GGCATGTATGAGTGATCGGAGT 59.964 50.000 0.00 0.00 0.00 3.85
106 107 3.055591 GCATGTATGAGTGATCGGAGTG 58.944 50.000 0.00 0.00 0.00 3.51
107 108 3.491619 GCATGTATGAGTGATCGGAGTGT 60.492 47.826 0.00 0.00 0.00 3.55
108 109 4.686972 CATGTATGAGTGATCGGAGTGTT 58.313 43.478 0.00 0.00 0.00 3.32
109 110 4.801330 TGTATGAGTGATCGGAGTGTTT 57.199 40.909 0.00 0.00 0.00 2.83
110 111 4.494484 TGTATGAGTGATCGGAGTGTTTG 58.506 43.478 0.00 0.00 0.00 2.93
111 112 2.455674 TGAGTGATCGGAGTGTTTGG 57.544 50.000 0.00 0.00 0.00 3.28
112 113 1.967779 TGAGTGATCGGAGTGTTTGGA 59.032 47.619 0.00 0.00 0.00 3.53
113 114 2.288825 TGAGTGATCGGAGTGTTTGGAC 60.289 50.000 0.00 0.00 0.00 4.02
114 115 1.068474 GTGATCGGAGTGTTTGGACG 58.932 55.000 0.00 0.00 0.00 4.79
115 116 0.963225 TGATCGGAGTGTTTGGACGA 59.037 50.000 0.00 0.00 38.00 4.20
116 117 1.341852 TGATCGGAGTGTTTGGACGAA 59.658 47.619 0.00 0.00 37.11 3.85
117 118 2.028476 TGATCGGAGTGTTTGGACGAAT 60.028 45.455 0.00 0.00 37.11 3.34
118 119 3.193903 TGATCGGAGTGTTTGGACGAATA 59.806 43.478 0.00 0.00 37.11 1.75
119 120 3.663995 TCGGAGTGTTTGGACGAATAA 57.336 42.857 0.00 0.00 0.00 1.40
120 121 3.581755 TCGGAGTGTTTGGACGAATAAG 58.418 45.455 0.00 0.00 0.00 1.73
121 122 3.256383 TCGGAGTGTTTGGACGAATAAGA 59.744 43.478 0.00 0.00 0.00 2.10
122 123 3.991773 CGGAGTGTTTGGACGAATAAGAA 59.008 43.478 0.00 0.00 0.00 2.52
123 124 4.143179 CGGAGTGTTTGGACGAATAAGAAC 60.143 45.833 0.00 0.00 0.00 3.01
124 125 4.153655 GGAGTGTTTGGACGAATAAGAACC 59.846 45.833 0.00 0.00 0.00 3.62
125 126 4.070009 AGTGTTTGGACGAATAAGAACCC 58.930 43.478 0.00 0.00 0.00 4.11
126 127 3.816523 GTGTTTGGACGAATAAGAACCCA 59.183 43.478 0.00 0.00 0.00 4.51
127 128 4.457949 GTGTTTGGACGAATAAGAACCCAT 59.542 41.667 0.00 0.00 0.00 4.00
128 129 4.457603 TGTTTGGACGAATAAGAACCCATG 59.542 41.667 0.00 0.00 0.00 3.66
129 130 3.275617 TGGACGAATAAGAACCCATGG 57.724 47.619 4.14 4.14 0.00 3.66
130 131 2.841266 TGGACGAATAAGAACCCATGGA 59.159 45.455 15.22 0.00 0.00 3.41
131 132 3.118408 TGGACGAATAAGAACCCATGGAG 60.118 47.826 15.22 5.95 0.00 3.86
132 133 3.467803 GACGAATAAGAACCCATGGAGG 58.532 50.000 15.22 0.00 37.03 4.30
155 156 1.069255 GAAGGACGAAAGCGGAGAAC 58.931 55.000 0.00 0.00 43.17 3.01
157 158 2.092882 GGACGAAAGCGGAGAACGG 61.093 63.158 0.00 0.00 44.51 4.44
162 163 2.814183 GAAAGCGGAGAACGGCGAGA 62.814 60.000 16.62 0.00 45.00 4.04
175 176 2.045242 CGAGAGAGACGTGGGGGA 60.045 66.667 0.00 0.00 0.00 4.81
193 194 0.611714 GAGCGGGACAGGGAACTTTA 59.388 55.000 0.00 0.00 40.21 1.85
194 195 1.209747 GAGCGGGACAGGGAACTTTAT 59.790 52.381 0.00 0.00 40.21 1.40
197 198 4.228824 AGCGGGACAGGGAACTTTATATA 58.771 43.478 0.00 0.00 40.21 0.86
293 294 5.465056 GTGAGGCTATGCTTAAATCTCTCAC 59.535 44.000 0.00 0.00 40.76 3.51
333 334 2.483889 GGTTAGAGAGAGAAATGCGGGG 60.484 54.545 0.00 0.00 0.00 5.73
435 438 4.642885 TCCTGTTTACAACCAAGAACCAAG 59.357 41.667 0.00 0.00 0.00 3.61
442 445 3.053619 ACAACCAAGAACCAAGACTTCCT 60.054 43.478 0.00 0.00 0.00 3.36
449 452 2.658807 ACCAAGACTTCCTCCAAACC 57.341 50.000 0.00 0.00 0.00 3.27
486 489 2.830370 CGCATTTCTGGGCCTCCC 60.830 66.667 4.53 0.00 45.71 4.30
620 623 5.771153 TCACAATCTTGTTTGAATCTGCA 57.229 34.783 0.00 0.00 39.91 4.41
625 628 3.202097 TCTTGTTTGAATCTGCACGACA 58.798 40.909 0.00 0.00 0.00 4.35
626 629 3.814842 TCTTGTTTGAATCTGCACGACAT 59.185 39.130 0.00 0.00 0.00 3.06
627 630 3.541071 TGTTTGAATCTGCACGACATG 57.459 42.857 0.00 0.00 0.00 3.21
640 643 1.062047 GACATGCTGATGCTGTGCG 59.938 57.895 0.00 0.00 40.48 5.34
738 743 2.542205 CCAATCTGTATGTGCATTGGCG 60.542 50.000 0.00 0.00 45.35 5.69
740 745 1.368641 TCTGTATGTGCATTGGCGAC 58.631 50.000 0.00 0.00 45.35 5.19
747 753 4.424711 GCATTGGCGACTGGGGGA 62.425 66.667 0.00 0.00 0.00 4.81
875 881 2.152016 GAGTAACCAAGGTTGCAGGAC 58.848 52.381 19.78 8.02 41.94 3.85
878 884 0.258774 AACCAAGGTTGCAGGACTGT 59.741 50.000 3.19 0.00 36.91 3.55
912 918 2.983229 ACAATCTGGTGTGATCTGAGC 58.017 47.619 0.00 0.00 0.00 4.26
915 921 2.975732 TCTGGTGTGATCTGAGCATC 57.024 50.000 0.00 0.00 0.00 3.91
952 958 1.003233 GAGGTTCACAGGACAGGCC 60.003 63.158 0.00 0.00 0.00 5.19
972 978 0.451783 GGGCATTTGAGCAACCTACG 59.548 55.000 0.00 0.00 35.83 3.51
981 987 2.031245 TGAGCAACCTACGTGCAAATTG 60.031 45.455 0.00 0.00 44.74 2.32
1051 1057 3.880846 CTTGGCGGCGATTCTGGC 61.881 66.667 12.98 0.00 46.07 4.85
1060 1066 2.110967 CGATTCTGGCTGGTGCTGG 61.111 63.158 0.00 0.00 39.59 4.85
1218 1224 2.759795 GGCAAGGCCTGGTTCTCT 59.240 61.111 5.69 0.00 46.69 3.10
1228 1234 1.554836 CTGGTTCTCTGAGGAGCTGA 58.445 55.000 15.65 0.00 39.31 4.26
1266 1272 1.326548 GTGGAAATCGCGCGTTTATCT 59.673 47.619 30.98 12.90 0.00 1.98
1284 1290 7.201644 CGTTTATCTTATTGCCAGATTCACAGT 60.202 37.037 0.00 0.00 32.94 3.55
1570 1576 5.587388 TGAGGATTTTGATCAATTGCCTC 57.413 39.130 27.46 27.46 40.73 4.70
1591 1597 3.575256 TCACGGAGGTTACAGAAAGCTAA 59.425 43.478 0.00 0.00 45.83 3.09
1592 1598 4.039488 TCACGGAGGTTACAGAAAGCTAAA 59.961 41.667 0.00 0.00 45.83 1.85
1593 1599 4.935808 CACGGAGGTTACAGAAAGCTAAAT 59.064 41.667 0.00 0.00 45.83 1.40
1594 1600 4.935808 ACGGAGGTTACAGAAAGCTAAATG 59.064 41.667 0.00 0.00 45.83 2.32
1595 1601 4.201822 CGGAGGTTACAGAAAGCTAAATGC 60.202 45.833 0.00 0.00 45.83 3.56
1596 1602 4.096532 GGAGGTTACAGAAAGCTAAATGCC 59.903 45.833 0.00 0.00 45.83 4.40
1597 1603 4.923415 AGGTTACAGAAAGCTAAATGCCT 58.077 39.130 0.00 0.00 44.05 4.75
1598 1604 4.702131 AGGTTACAGAAAGCTAAATGCCTG 59.298 41.667 0.00 0.00 44.05 4.85
1599 1605 4.459337 GGTTACAGAAAGCTAAATGCCTGT 59.541 41.667 0.00 0.00 44.23 4.00
1648 1654 0.182061 AGATGATGATGTTGGCGGCT 59.818 50.000 11.43 0.00 0.00 5.52
1759 1765 6.971184 TCCGAAAGAGAAAAGTATGTATCGTC 59.029 38.462 0.00 0.00 0.00 4.20
1841 1847 4.853924 AATGTAGCTTTTCTGGTTGGTG 57.146 40.909 0.00 0.00 0.00 4.17
1898 1904 4.298009 CTGACCAGGAAGCTGCAG 57.702 61.111 10.11 10.11 0.00 4.41
1899 1905 1.675801 CTGACCAGGAAGCTGCAGA 59.324 57.895 20.43 0.00 0.00 4.26
1900 1906 0.391395 CTGACCAGGAAGCTGCAGAG 60.391 60.000 20.43 0.00 0.00 3.35
1901 1907 1.078567 GACCAGGAAGCTGCAGAGG 60.079 63.158 20.43 10.73 0.00 3.69
1902 1908 2.438075 CCAGGAAGCTGCAGAGGC 60.438 66.667 20.43 2.30 41.68 4.70
1903 1909 2.669849 CAGGAAGCTGCAGAGGCT 59.330 61.111 20.43 5.29 42.31 4.58
1908 1914 1.664306 AAGCTGCAGAGGCTTTTGC 59.336 52.632 20.43 15.48 46.24 3.68
1909 1915 0.826672 AAGCTGCAGAGGCTTTTGCT 60.827 50.000 20.43 0.81 46.24 3.91
1910 1916 1.080705 GCTGCAGAGGCTTTTGCTG 60.081 57.895 20.43 20.34 46.54 4.41
1952 1958 5.120399 CCCGCTCAACTACAAACCATTATA 58.880 41.667 0.00 0.00 0.00 0.98
2005 2011 2.771943 TGGTGGTAGAGGCAATCTTAGG 59.228 50.000 0.00 0.00 39.64 2.69
2184 2190 4.162888 TGAGTACAGTCAATCTGATGCCAT 59.837 41.667 0.00 0.00 46.27 4.40
2253 2265 1.283321 AGCTGAAGGTGAAATCTCCCC 59.717 52.381 0.00 0.00 0.00 4.81
2275 2287 1.742268 GAGTCCCTGAAGAAGCAATGC 59.258 52.381 0.00 0.00 0.00 3.56
2497 2509 6.150140 AGCTAAATGACTTGCTTACAGAAAGG 59.850 38.462 0.00 0.00 35.08 3.11
2547 2559 5.538118 TGAACTCGAAAGTTATGAGAGCAA 58.462 37.500 10.37 0.00 45.80 3.91
2575 2587 2.309528 TCGAACCATTTGATCTCGGG 57.690 50.000 0.00 0.00 0.00 5.14
2578 2590 3.118408 TCGAACCATTTGATCTCGGGAAT 60.118 43.478 0.00 0.00 0.00 3.01
2588 2600 1.438651 TCTCGGGAATTTTGACGCTG 58.561 50.000 0.00 0.00 0.00 5.18
2611 2623 3.311990 TGATGGAGATATGGCACTCAGT 58.688 45.455 6.02 0.00 35.17 3.41
2622 2634 2.234661 TGGCACTCAGTGTCTTGGATAG 59.765 50.000 11.53 0.00 39.12 2.08
2714 2726 3.372206 CAGATTAGAGGAAACACTTGGCG 59.628 47.826 0.00 0.00 31.93 5.69
2747 2759 4.654091 AATAGATTTGATTTGGGTGGCG 57.346 40.909 0.00 0.00 0.00 5.69
2755 2767 1.805428 ATTTGGGTGGCGCAAGTGAC 61.805 55.000 10.83 0.00 37.58 3.67
2757 2769 2.672996 GGGTGGCGCAAGTGACAT 60.673 61.111 10.83 0.00 41.68 3.06
2815 2827 2.785868 GCCTGGCCAACATGTAGAG 58.214 57.895 7.01 0.00 0.00 2.43
2834 2846 6.875726 TGTAGAGAACTCAGAATTGGAATGTG 59.124 38.462 4.64 0.00 0.00 3.21
2861 2873 1.065926 CACTATTGCCTCAGGAGCACA 60.066 52.381 0.00 0.00 40.69 4.57
2869 2881 1.354040 CTCAGGAGCACATGAACGAC 58.646 55.000 0.00 0.00 36.40 4.34
2873 2885 1.066858 AGGAGCACATGAACGACGAAT 60.067 47.619 0.00 0.00 0.00 3.34
2924 2936 4.326255 CAAGTGATGGACCTGGCC 57.674 61.111 0.00 0.00 0.00 5.36
2925 2937 1.379916 CAAGTGATGGACCTGGCCA 59.620 57.895 4.71 4.71 43.23 5.36
2926 2938 0.251297 CAAGTGATGGACCTGGCCAA 60.251 55.000 7.01 0.00 42.16 4.52
2927 2939 0.038744 AAGTGATGGACCTGGCCAAG 59.961 55.000 7.01 2.23 42.16 3.61
2928 2940 0.842030 AGTGATGGACCTGGCCAAGA 60.842 55.000 8.77 1.88 42.16 3.02
2929 2941 0.257039 GTGATGGACCTGGCCAAGAT 59.743 55.000 8.77 0.00 42.16 2.40
2930 2942 0.548031 TGATGGACCTGGCCAAGATC 59.452 55.000 8.77 5.13 42.16 2.75
2931 2943 0.842635 GATGGACCTGGCCAAGATCT 59.157 55.000 8.77 0.00 42.16 2.75
2932 2944 2.050144 GATGGACCTGGCCAAGATCTA 58.950 52.381 8.77 3.62 42.16 1.98
2933 2945 1.500474 TGGACCTGGCCAAGATCTAG 58.500 55.000 8.77 0.00 34.31 2.43
2934 2946 1.008327 TGGACCTGGCCAAGATCTAGA 59.992 52.381 8.77 0.00 34.31 2.43
2935 2947 2.119495 GGACCTGGCCAAGATCTAGAA 58.881 52.381 8.77 0.00 0.00 2.10
2936 2948 2.505819 GGACCTGGCCAAGATCTAGAAA 59.494 50.000 8.77 0.00 0.00 2.52
2937 2949 3.054361 GGACCTGGCCAAGATCTAGAAAA 60.054 47.826 8.77 0.00 0.00 2.29
2938 2950 3.942115 GACCTGGCCAAGATCTAGAAAAC 59.058 47.826 8.77 0.00 0.00 2.43
2939 2951 3.589288 ACCTGGCCAAGATCTAGAAAACT 59.411 43.478 8.77 0.00 0.00 2.66
2940 2952 4.195416 CCTGGCCAAGATCTAGAAAACTC 58.805 47.826 7.01 0.00 0.00 3.01
2941 2953 4.323792 CCTGGCCAAGATCTAGAAAACTCA 60.324 45.833 7.01 0.00 0.00 3.41
2942 2954 4.836825 TGGCCAAGATCTAGAAAACTCAG 58.163 43.478 0.61 0.00 0.00 3.35
2943 2955 4.532126 TGGCCAAGATCTAGAAAACTCAGA 59.468 41.667 0.61 0.00 0.00 3.27
2944 2956 5.013079 TGGCCAAGATCTAGAAAACTCAGAA 59.987 40.000 0.61 0.00 0.00 3.02
2945 2957 6.118852 GGCCAAGATCTAGAAAACTCAGAAT 58.881 40.000 0.00 0.00 0.00 2.40
2946 2958 6.601217 GGCCAAGATCTAGAAAACTCAGAATT 59.399 38.462 0.00 0.00 0.00 2.17
2947 2959 7.414984 GGCCAAGATCTAGAAAACTCAGAATTG 60.415 40.741 0.00 0.00 0.00 2.32
2948 2960 7.414984 GCCAAGATCTAGAAAACTCAGAATTGG 60.415 40.741 0.00 1.50 39.67 3.16
2949 2961 7.826252 CCAAGATCTAGAAAACTCAGAATTGGA 59.174 37.037 0.00 0.00 39.37 3.53
2950 2962 9.224267 CAAGATCTAGAAAACTCAGAATTGGAA 57.776 33.333 0.00 0.00 0.00 3.53
2951 2963 9.972106 AAGATCTAGAAAACTCAGAATTGGAAT 57.028 29.630 0.00 0.00 0.00 3.01
2952 2964 9.393512 AGATCTAGAAAACTCAGAATTGGAATG 57.606 33.333 0.00 0.00 0.00 2.67
2953 2965 9.171877 GATCTAGAAAACTCAGAATTGGAATGT 57.828 33.333 0.00 0.00 0.00 2.71
2954 2966 8.553459 TCTAGAAAACTCAGAATTGGAATGTC 57.447 34.615 0.00 0.00 0.00 3.06
2955 2967 8.156820 TCTAGAAAACTCAGAATTGGAATGTCA 58.843 33.333 0.00 0.00 0.00 3.58
2956 2968 7.211966 AGAAAACTCAGAATTGGAATGTCAG 57.788 36.000 0.00 0.00 0.00 3.51
2957 2969 7.000472 AGAAAACTCAGAATTGGAATGTCAGA 59.000 34.615 0.00 0.00 0.00 3.27
2958 2970 6.814506 AAACTCAGAATTGGAATGTCAGAG 57.185 37.500 0.00 0.00 0.00 3.35
2959 2971 5.495926 ACTCAGAATTGGAATGTCAGAGT 57.504 39.130 0.00 0.00 0.00 3.24
2960 2972 5.874093 ACTCAGAATTGGAATGTCAGAGTT 58.126 37.500 0.00 0.00 30.32 3.01
2961 2973 5.936956 ACTCAGAATTGGAATGTCAGAGTTC 59.063 40.000 0.00 0.00 30.32 3.01
2962 2974 5.868454 TCAGAATTGGAATGTCAGAGTTCA 58.132 37.500 0.00 0.00 0.00 3.18
2963 2975 5.702670 TCAGAATTGGAATGTCAGAGTTCAC 59.297 40.000 0.00 0.00 0.00 3.18
2964 2976 5.704515 CAGAATTGGAATGTCAGAGTTCACT 59.295 40.000 0.00 0.00 0.00 3.41
2965 2977 6.875726 CAGAATTGGAATGTCAGAGTTCACTA 59.124 38.462 0.00 0.00 0.00 2.74
2966 2978 7.551974 CAGAATTGGAATGTCAGAGTTCACTAT 59.448 37.037 0.00 0.00 0.00 2.12
2967 2979 8.105829 AGAATTGGAATGTCAGAGTTCACTATT 58.894 33.333 0.00 0.00 0.00 1.73
2968 2980 7.621428 ATTGGAATGTCAGAGTTCACTATTG 57.379 36.000 0.00 0.00 0.00 1.90
2969 2981 4.937620 TGGAATGTCAGAGTTCACTATTGC 59.062 41.667 0.00 0.00 0.00 3.56
2970 2982 4.333926 GGAATGTCAGAGTTCACTATTGCC 59.666 45.833 0.00 0.00 0.00 4.52
2971 2983 4.833478 ATGTCAGAGTTCACTATTGCCT 57.167 40.909 0.00 0.00 0.00 4.75
2972 2984 4.193826 TGTCAGAGTTCACTATTGCCTC 57.806 45.455 0.00 0.00 0.00 4.70
2973 2985 3.578282 TGTCAGAGTTCACTATTGCCTCA 59.422 43.478 0.00 0.00 0.00 3.86
2974 2986 4.180057 GTCAGAGTTCACTATTGCCTCAG 58.820 47.826 0.00 0.00 0.00 3.35
2975 2987 3.196469 TCAGAGTTCACTATTGCCTCAGG 59.804 47.826 0.00 0.00 0.00 3.86
2976 2988 3.196469 CAGAGTTCACTATTGCCTCAGGA 59.804 47.826 0.00 0.00 0.00 3.86
2977 2989 3.840666 AGAGTTCACTATTGCCTCAGGAA 59.159 43.478 0.00 0.00 0.00 3.36
2978 2990 3.935828 GAGTTCACTATTGCCTCAGGAAC 59.064 47.826 0.00 0.00 34.82 3.62
2979 2991 3.327757 AGTTCACTATTGCCTCAGGAACA 59.672 43.478 0.00 0.00 36.52 3.18
2980 2992 3.334583 TCACTATTGCCTCAGGAACAC 57.665 47.619 0.00 0.00 0.00 3.32
2981 2993 2.637382 TCACTATTGCCTCAGGAACACA 59.363 45.455 0.00 0.00 0.00 3.72
2982 2994 3.264193 TCACTATTGCCTCAGGAACACAT 59.736 43.478 0.00 0.00 0.00 3.21
2983 2995 3.376234 CACTATTGCCTCAGGAACACATG 59.624 47.826 0.00 0.00 0.00 3.21
2984 2996 2.885135 ATTGCCTCAGGAACACATGA 57.115 45.000 0.00 0.00 0.00 3.07
2985 2997 2.655090 TTGCCTCAGGAACACATGAA 57.345 45.000 0.00 0.00 0.00 2.57
2986 2998 1.896220 TGCCTCAGGAACACATGAAC 58.104 50.000 0.00 0.00 0.00 3.18
2987 2999 0.798776 GCCTCAGGAACACATGAACG 59.201 55.000 0.00 0.00 0.00 3.95
2988 3000 1.608025 GCCTCAGGAACACATGAACGA 60.608 52.381 0.00 0.00 0.00 3.85
2989 3001 2.936993 GCCTCAGGAACACATGAACGAT 60.937 50.000 0.00 0.00 0.00 3.73
2990 3002 2.674852 CCTCAGGAACACATGAACGATG 59.325 50.000 0.00 0.00 38.15 3.84
2991 3003 3.588955 CTCAGGAACACATGAACGATGA 58.411 45.455 0.00 0.00 35.80 2.92
2992 3004 3.996363 CTCAGGAACACATGAACGATGAA 59.004 43.478 0.00 0.00 35.80 2.57
2993 3005 4.578871 TCAGGAACACATGAACGATGAAT 58.421 39.130 0.00 0.00 35.80 2.57
2994 3006 4.631377 TCAGGAACACATGAACGATGAATC 59.369 41.667 0.00 0.00 35.80 2.52
2995 3007 4.392754 CAGGAACACATGAACGATGAATCA 59.607 41.667 0.00 0.00 35.80 2.57
2996 3008 4.393062 AGGAACACATGAACGATGAATCAC 59.607 41.667 0.00 0.00 35.80 3.06
2997 3009 4.154015 GGAACACATGAACGATGAATCACA 59.846 41.667 0.00 0.00 35.80 3.58
2998 3010 4.668576 ACACATGAACGATGAATCACAC 57.331 40.909 0.00 0.00 35.80 3.82
2999 3011 4.318332 ACACATGAACGATGAATCACACT 58.682 39.130 0.00 0.00 35.80 3.55
3000 3012 4.756642 ACACATGAACGATGAATCACACTT 59.243 37.500 0.00 0.00 35.80 3.16
3001 3013 5.084055 CACATGAACGATGAATCACACTTG 58.916 41.667 0.00 0.00 35.80 3.16
3002 3014 4.996758 ACATGAACGATGAATCACACTTGA 59.003 37.500 0.00 0.00 35.80 3.02
3003 3015 5.469760 ACATGAACGATGAATCACACTTGAA 59.530 36.000 0.00 0.00 33.84 2.69
3004 3016 6.017192 ACATGAACGATGAATCACACTTGAAA 60.017 34.615 0.00 0.00 33.84 2.69
3005 3017 5.989249 TGAACGATGAATCACACTTGAAAG 58.011 37.500 0.00 0.00 34.61 2.62
3006 3018 5.757808 TGAACGATGAATCACACTTGAAAGA 59.242 36.000 0.00 0.00 34.61 2.52
3007 3019 6.427853 TGAACGATGAATCACACTTGAAAGAT 59.572 34.615 0.00 0.00 34.61 2.40
3008 3020 6.174451 ACGATGAATCACACTTGAAAGATG 57.826 37.500 0.00 0.00 34.61 2.90
3009 3021 5.934043 ACGATGAATCACACTTGAAAGATGA 59.066 36.000 0.00 1.22 34.61 2.92
3010 3022 6.128445 ACGATGAATCACACTTGAAAGATGAC 60.128 38.462 0.00 0.00 34.61 3.06
3011 3023 6.091849 CGATGAATCACACTTGAAAGATGACT 59.908 38.462 0.00 0.00 34.61 3.41
3012 3024 6.791887 TGAATCACACTTGAAAGATGACTC 57.208 37.500 0.00 1.28 34.61 3.36
3013 3025 6.290605 TGAATCACACTTGAAAGATGACTCA 58.709 36.000 8.24 8.24 34.61 3.41
3014 3026 6.767423 TGAATCACACTTGAAAGATGACTCAA 59.233 34.615 9.27 0.00 32.44 3.02
3015 3027 7.446319 TGAATCACACTTGAAAGATGACTCAAT 59.554 33.333 9.27 0.00 32.44 2.57
3016 3028 6.549912 TCACACTTGAAAGATGACTCAATG 57.450 37.500 0.00 0.00 31.40 2.82
3017 3029 6.290605 TCACACTTGAAAGATGACTCAATGA 58.709 36.000 0.00 0.00 31.40 2.57
3018 3030 6.426025 TCACACTTGAAAGATGACTCAATGAG 59.574 38.462 8.98 8.98 31.40 2.90
3019 3031 6.426025 CACACTTGAAAGATGACTCAATGAGA 59.574 38.462 18.20 0.00 33.32 3.27
3033 3045 5.945144 TCAATGAGAGATCATCCAAGTGA 57.055 39.130 0.00 0.00 0.00 3.41
3034 3046 6.496144 TCAATGAGAGATCATCCAAGTGAT 57.504 37.500 0.00 0.00 41.36 3.06
3070 3184 7.678947 ACATGTAGAAAACTCAGAATTGGAG 57.321 36.000 0.00 2.88 38.36 3.86
3086 3200 2.803956 TGGAGTGTCGGAGTTCACTAT 58.196 47.619 0.32 0.00 41.44 2.12
3118 3232 6.071334 AGGAAGACTTGAACGATGAATCACTA 60.071 38.462 0.00 0.00 0.00 2.74
3127 3241 7.199078 TGAACGATGAATCACTAAGAGATCAG 58.801 38.462 0.00 0.00 31.86 2.90
3167 3281 4.614306 GCCAATACGTACAAAACCCAGAAC 60.614 45.833 0.00 0.00 0.00 3.01
3168 3282 4.758165 CCAATACGTACAAAACCCAGAACT 59.242 41.667 0.00 0.00 0.00 3.01
3169 3283 5.334569 CCAATACGTACAAAACCCAGAACTG 60.335 44.000 0.00 0.00 0.00 3.16
3186 3300 1.072331 ACTGGAATGCCGAAGTTCACT 59.928 47.619 3.32 0.00 36.79 3.41
3187 3301 1.466167 CTGGAATGCCGAAGTTCACTG 59.534 52.381 3.32 0.00 36.79 3.66
3193 3307 1.569493 CCGAAGTTCACTGTTGCCG 59.431 57.895 3.32 0.00 0.00 5.69
3217 3331 5.109500 AGGAAGACCTGAAAGATGAATCC 57.891 43.478 0.00 0.00 45.92 3.01
3223 3337 3.515502 ACCTGAAAGATGAATCCGTCTCA 59.484 43.478 0.00 0.00 37.67 3.27
3252 3366 8.084073 ACAACGAAATGATGAAAATCAATCTGT 58.916 29.630 0.00 0.00 33.83 3.41
3259 3373 9.635520 AATGATGAAAATCAATCTGTTGAGAAC 57.364 29.630 0.00 0.00 46.75 3.01
3295 3409 1.202452 TCATGTTCGCGCTCAGATGAT 60.202 47.619 5.56 0.00 0.00 2.45
3311 3425 8.226448 GCTCAGATGATGATAAAATTAGTTCCG 58.774 37.037 0.00 0.00 37.28 4.30
3336 3450 8.003784 CGTGGAAAGCATTAAACAAGAAATTTC 58.996 33.333 10.33 10.33 0.00 2.17
3353 3467 8.413899 AGAAATTTCGCTCTTGAATAGTAGAC 57.586 34.615 12.42 0.00 0.00 2.59
3423 3537 9.522804 GAGTTCTCTTAAATGTAGTAGTGATGG 57.477 37.037 0.00 0.00 0.00 3.51
3466 3580 3.902881 ACTAGTCATTTGAGGGAGCTG 57.097 47.619 0.00 0.00 0.00 4.24
3475 3589 0.176680 TGAGGGAGCTGCGAAGAATC 59.823 55.000 0.00 0.00 0.00 2.52
3603 3717 4.432712 AGAACATGCTGTGGAAAAACAAC 58.567 39.130 0.00 0.00 0.00 3.32
3673 3795 4.758674 CCTTATGCATTGTATGAGGTCCAG 59.241 45.833 14.87 0.00 0.00 3.86
3682 3804 5.372343 TGTATGAGGTCCAGCAAATGTAT 57.628 39.130 0.00 0.00 0.00 2.29
3729 3851 4.228210 AGCCTTAGGTTGATTCTTCCATCA 59.772 41.667 0.00 0.00 0.00 3.07
3733 3855 6.405176 CCTTAGGTTGATTCTTCCATCAAAGC 60.405 42.308 0.00 0.00 43.30 3.51
3798 3923 5.047306 TCAGTGTAGTGTATGAACTTCCAGG 60.047 44.000 0.00 0.00 0.00 4.45
3850 3975 6.150474 GTGATCCCTAGCATTACTCTACTCTC 59.850 46.154 0.00 0.00 0.00 3.20
4011 4138 7.469537 TTTTTGGACTGGAAAGAAACAAGTA 57.530 32.000 0.00 0.00 0.00 2.24
4055 4182 3.031660 CGAAGGACTTGGTAGCGTC 57.968 57.895 0.00 0.00 0.00 5.19
4076 4203 7.042456 AGCGTCTCATGATGTTTATTGACATAC 60.042 37.037 0.00 0.00 40.21 2.39
4077 4204 7.042456 GCGTCTCATGATGTTTATTGACATACT 60.042 37.037 0.00 0.00 40.21 2.12
4078 4205 9.463443 CGTCTCATGATGTTTATTGACATACTA 57.537 33.333 0.00 0.00 40.21 1.82
4174 4301 0.391661 ACGCGAACTTCATGATGCCT 60.392 50.000 15.93 0.00 0.00 4.75
4209 4336 2.694109 GGGAAGTACGGCAGTAATCTCT 59.306 50.000 0.00 0.00 34.16 3.10
4215 4342 1.478510 ACGGCAGTAATCTCTCTGTGG 59.521 52.381 0.00 0.00 34.57 4.17
4256 4383 0.730155 ATGCATGCTTTTGTGTCGCG 60.730 50.000 20.33 0.00 0.00 5.87
4257 4384 1.082169 GCATGCTTTTGTGTCGCGA 60.082 52.632 11.37 3.71 0.00 5.87
4263 4395 2.480426 CTTTTGTGTCGCGACGAGGC 62.480 60.000 31.88 21.67 36.23 4.70
4323 4455 2.679349 GCTGGAGGAGAAGTGGAACATC 60.679 54.545 0.00 0.00 44.52 3.06
4327 4459 3.604582 GAGGAGAAGTGGAACATCCTTG 58.395 50.000 0.00 0.00 43.68 3.61
4328 4460 2.307098 AGGAGAAGTGGAACATCCTTGG 59.693 50.000 0.00 0.00 41.82 3.61
4436 4568 5.940192 TTTCAGTTTGCACTACATGTAGG 57.060 39.130 31.20 22.01 37.49 3.18
4467 4599 1.794714 TCCTGGGAGCTGAGGTAATC 58.205 55.000 0.00 0.00 0.00 1.75
4468 4600 1.008327 TCCTGGGAGCTGAGGTAATCA 59.992 52.381 0.00 0.00 36.21 2.57
4469 4601 1.139853 CCTGGGAGCTGAGGTAATCAC 59.860 57.143 0.00 0.00 33.22 3.06
4470 4602 1.139853 CTGGGAGCTGAGGTAATCACC 59.860 57.143 0.00 0.00 46.19 4.02
4472 4604 4.852142 TGGGAGCTGAGGTAATCACCCA 62.852 54.545 4.15 4.15 45.18 4.51
4483 4615 4.394729 GGTAATCACCCAGTTGAAGTTCA 58.605 43.478 0.08 0.08 39.11 3.18
4484 4616 5.010282 GGTAATCACCCAGTTGAAGTTCAT 58.990 41.667 6.36 0.00 39.11 2.57
4485 4617 5.123979 GGTAATCACCCAGTTGAAGTTCATC 59.876 44.000 6.36 6.10 39.11 2.92
4486 4618 4.647564 ATCACCCAGTTGAAGTTCATCT 57.352 40.909 6.36 8.53 0.00 2.90
4487 4619 4.437682 TCACCCAGTTGAAGTTCATCTT 57.562 40.909 12.79 0.00 39.32 2.40
4488 4620 4.136796 TCACCCAGTTGAAGTTCATCTTG 58.863 43.478 12.79 10.04 36.40 3.02
4489 4621 3.885297 CACCCAGTTGAAGTTCATCTTGT 59.115 43.478 12.79 10.57 36.40 3.16
4490 4622 4.339247 CACCCAGTTGAAGTTCATCTTGTT 59.661 41.667 12.79 0.00 36.40 2.83
4491 4623 4.580580 ACCCAGTTGAAGTTCATCTTGTTC 59.419 41.667 12.79 0.00 36.40 3.18
4492 4624 4.022849 CCCAGTTGAAGTTCATCTTGTTCC 60.023 45.833 12.79 0.00 36.40 3.62
4493 4625 4.022849 CCAGTTGAAGTTCATCTTGTTCCC 60.023 45.833 12.79 0.00 36.40 3.97
4494 4626 4.022849 CAGTTGAAGTTCATCTTGTTCCCC 60.023 45.833 12.79 0.00 36.40 4.81
4495 4627 4.141158 AGTTGAAGTTCATCTTGTTCCCCT 60.141 41.667 6.36 0.00 36.40 4.79
4496 4628 4.021102 TGAAGTTCATCTTGTTCCCCTC 57.979 45.455 0.08 0.00 36.40 4.30
4497 4629 3.394274 TGAAGTTCATCTTGTTCCCCTCA 59.606 43.478 0.08 0.00 36.40 3.86
4498 4630 4.043310 TGAAGTTCATCTTGTTCCCCTCAT 59.957 41.667 0.08 0.00 36.40 2.90
4499 4631 4.227864 AGTTCATCTTGTTCCCCTCATC 57.772 45.455 0.00 0.00 0.00 2.92
4500 4632 2.939103 GTTCATCTTGTTCCCCTCATCG 59.061 50.000 0.00 0.00 0.00 3.84
4501 4633 2.187958 TCATCTTGTTCCCCTCATCGT 58.812 47.619 0.00 0.00 0.00 3.73
4502 4634 2.168521 TCATCTTGTTCCCCTCATCGTC 59.831 50.000 0.00 0.00 0.00 4.20
4503 4635 1.639722 TCTTGTTCCCCTCATCGTCA 58.360 50.000 0.00 0.00 0.00 4.35
4504 4636 1.275291 TCTTGTTCCCCTCATCGTCAC 59.725 52.381 0.00 0.00 0.00 3.67
4505 4637 1.001974 CTTGTTCCCCTCATCGTCACA 59.998 52.381 0.00 0.00 0.00 3.58
4506 4638 0.320374 TGTTCCCCTCATCGTCACAC 59.680 55.000 0.00 0.00 0.00 3.82
4507 4639 0.391263 GTTCCCCTCATCGTCACACC 60.391 60.000 0.00 0.00 0.00 4.16
4508 4640 1.884075 TTCCCCTCATCGTCACACCG 61.884 60.000 0.00 0.00 0.00 4.94
4509 4641 2.509336 CCCTCATCGTCACACCGC 60.509 66.667 0.00 0.00 0.00 5.68
4510 4642 2.880879 CCTCATCGTCACACCGCG 60.881 66.667 0.00 0.00 0.00 6.46
4511 4643 2.178273 CTCATCGTCACACCGCGA 59.822 61.111 8.23 0.00 41.50 5.87
4512 4644 2.126618 TCATCGTCACACCGCGAC 60.127 61.111 8.23 0.00 40.03 5.19
4513 4645 2.430075 CATCGTCACACCGCGACA 60.430 61.111 8.23 0.00 40.03 4.35
4514 4646 2.019408 CATCGTCACACCGCGACAA 61.019 57.895 8.23 0.00 40.03 3.18
4515 4647 1.733041 ATCGTCACACCGCGACAAG 60.733 57.895 8.23 0.00 40.03 3.16
4516 4648 3.403057 CGTCACACCGCGACAAGG 61.403 66.667 8.23 0.00 32.72 3.61
4517 4649 3.041940 GTCACACCGCGACAAGGG 61.042 66.667 8.23 0.00 33.43 3.95
4533 4665 2.747855 GGGGGCAAGCTTCAGACG 60.748 66.667 0.00 0.00 0.00 4.18
4534 4666 2.347490 GGGGCAAGCTTCAGACGA 59.653 61.111 0.00 0.00 0.00 4.20
4535 4667 1.743252 GGGGCAAGCTTCAGACGAG 60.743 63.158 0.00 0.00 0.00 4.18
4536 4668 1.004440 GGGCAAGCTTCAGACGAGT 60.004 57.895 0.00 0.00 0.00 4.18
4537 4669 1.016653 GGGCAAGCTTCAGACGAGTC 61.017 60.000 0.00 0.00 0.00 3.36
4538 4670 1.347817 GGCAAGCTTCAGACGAGTCG 61.348 60.000 11.85 11.85 34.09 4.18
4539 4671 0.387367 GCAAGCTTCAGACGAGTCGA 60.387 55.000 21.50 0.00 34.09 4.20
4540 4672 1.332178 CAAGCTTCAGACGAGTCGAC 58.668 55.000 21.50 13.89 34.09 4.20
4541 4673 0.952280 AAGCTTCAGACGAGTCGACA 59.048 50.000 21.50 0.00 34.09 4.35
4542 4674 0.519519 AGCTTCAGACGAGTCGACAG 59.480 55.000 21.50 13.70 34.09 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 7.255242 CGAGCATCTCCAAACCAATACAATATT 60.255 37.037 0.00 0.00 0.00 1.28
4 5 5.527214 CGAGCATCTCCAAACCAATACAATA 59.473 40.000 0.00 0.00 0.00 1.90
6 7 3.689161 CGAGCATCTCCAAACCAATACAA 59.311 43.478 0.00 0.00 0.00 2.41
8 9 3.270877 ACGAGCATCTCCAAACCAATAC 58.729 45.455 0.00 0.00 0.00 1.89
9 10 3.627395 ACGAGCATCTCCAAACCAATA 57.373 42.857 0.00 0.00 0.00 1.90
11 12 2.565391 TCTACGAGCATCTCCAAACCAA 59.435 45.455 0.00 0.00 0.00 3.67
12 13 2.176045 TCTACGAGCATCTCCAAACCA 58.824 47.619 0.00 0.00 0.00 3.67
13 14 2.961526 TCTACGAGCATCTCCAAACC 57.038 50.000 0.00 0.00 0.00 3.27
14 15 6.903883 TTATTTCTACGAGCATCTCCAAAC 57.096 37.500 0.00 0.00 0.00 2.93
15 16 7.011389 CACATTATTTCTACGAGCATCTCCAAA 59.989 37.037 0.00 0.00 0.00 3.28
16 17 6.479990 CACATTATTTCTACGAGCATCTCCAA 59.520 38.462 0.00 0.00 0.00 3.53
17 18 5.985530 CACATTATTTCTACGAGCATCTCCA 59.014 40.000 0.00 0.00 0.00 3.86
18 19 5.986135 ACACATTATTTCTACGAGCATCTCC 59.014 40.000 0.00 0.00 0.00 3.71
20 21 6.256539 CACACACATTATTTCTACGAGCATCT 59.743 38.462 0.00 0.00 0.00 2.90
21 22 6.036083 ACACACACATTATTTCTACGAGCATC 59.964 38.462 0.00 0.00 0.00 3.91
22 23 5.874810 ACACACACATTATTTCTACGAGCAT 59.125 36.000 0.00 0.00 0.00 3.79
23 24 5.120053 CACACACACATTATTTCTACGAGCA 59.880 40.000 0.00 0.00 0.00 4.26
24 25 5.550981 CACACACACATTATTTCTACGAGC 58.449 41.667 0.00 0.00 0.00 5.03
25 26 5.550981 GCACACACACATTATTTCTACGAG 58.449 41.667 0.00 0.00 0.00 4.18
26 27 4.090786 CGCACACACACATTATTTCTACGA 59.909 41.667 0.00 0.00 0.00 3.43
27 28 4.322934 CGCACACACACATTATTTCTACG 58.677 43.478 0.00 0.00 0.00 3.51
28 29 4.088648 GCGCACACACACATTATTTCTAC 58.911 43.478 0.30 0.00 0.00 2.59
29 30 3.181525 CGCGCACACACACATTATTTCTA 60.182 43.478 8.75 0.00 0.00 2.10
30 31 2.412716 CGCGCACACACACATTATTTCT 60.413 45.455 8.75 0.00 0.00 2.52
31 32 1.904412 CGCGCACACACACATTATTTC 59.096 47.619 8.75 0.00 0.00 2.17
32 33 1.265635 ACGCGCACACACACATTATTT 59.734 42.857 5.73 0.00 0.00 1.40
33 34 0.871722 ACGCGCACACACACATTATT 59.128 45.000 5.73 0.00 0.00 1.40
34 35 0.871722 AACGCGCACACACACATTAT 59.128 45.000 5.73 0.00 0.00 1.28
35 36 0.658368 AAACGCGCACACACACATTA 59.342 45.000 5.73 0.00 0.00 1.90
36 37 0.658368 TAAACGCGCACACACACATT 59.342 45.000 5.73 0.00 0.00 2.71
37 38 0.871722 ATAAACGCGCACACACACAT 59.128 45.000 5.73 0.00 0.00 3.21
38 39 1.499049 TATAAACGCGCACACACACA 58.501 45.000 5.73 0.00 0.00 3.72
39 40 2.580729 TTATAAACGCGCACACACAC 57.419 45.000 5.73 0.00 0.00 3.82
40 41 2.801111 TCTTTATAAACGCGCACACACA 59.199 40.909 5.73 0.00 0.00 3.72
41 42 3.443054 TCTTTATAAACGCGCACACAC 57.557 42.857 5.73 0.00 0.00 3.82
42 43 3.680458 TCATCTTTATAAACGCGCACACA 59.320 39.130 5.73 0.00 0.00 3.72
43 44 4.201685 ACTCATCTTTATAAACGCGCACAC 60.202 41.667 5.73 0.00 0.00 3.82
44 45 3.930229 ACTCATCTTTATAAACGCGCACA 59.070 39.130 5.73 0.00 0.00 4.57
45 46 4.516092 ACTCATCTTTATAAACGCGCAC 57.484 40.909 5.73 0.00 0.00 5.34
46 47 5.751509 ACATACTCATCTTTATAAACGCGCA 59.248 36.000 5.73 0.00 0.00 6.09
47 48 6.065153 CACATACTCATCTTTATAAACGCGC 58.935 40.000 5.73 0.00 0.00 6.86
48 49 7.057402 CACACATACTCATCTTTATAAACGCG 58.943 38.462 3.53 3.53 0.00 6.01
49 50 7.846107 CACACACATACTCATCTTTATAAACGC 59.154 37.037 0.00 0.00 0.00 4.84
50 51 8.869897 ACACACACATACTCATCTTTATAAACG 58.130 33.333 0.00 0.00 0.00 3.60
51 52 9.973246 CACACACACATACTCATCTTTATAAAC 57.027 33.333 0.00 0.00 0.00 2.01
52 53 9.719355 ACACACACACATACTCATCTTTATAAA 57.281 29.630 0.00 0.00 0.00 1.40
55 56 9.317936 CATACACACACACATACTCATCTTTAT 57.682 33.333 0.00 0.00 0.00 1.40
56 57 8.311109 ACATACACACACACATACTCATCTTTA 58.689 33.333 0.00 0.00 0.00 1.85
57 58 7.118245 CACATACACACACACATACTCATCTTT 59.882 37.037 0.00 0.00 0.00 2.52
58 59 6.591448 CACATACACACACACATACTCATCTT 59.409 38.462 0.00 0.00 0.00 2.40
59 60 6.101997 CACATACACACACACATACTCATCT 58.898 40.000 0.00 0.00 0.00 2.90
60 61 5.291858 CCACATACACACACACATACTCATC 59.708 44.000 0.00 0.00 0.00 2.92
61 62 5.178061 CCACATACACACACACATACTCAT 58.822 41.667 0.00 0.00 0.00 2.90
62 63 4.562552 CCCACATACACACACACATACTCA 60.563 45.833 0.00 0.00 0.00 3.41
63 64 3.932710 CCCACATACACACACACATACTC 59.067 47.826 0.00 0.00 0.00 2.59
64 65 3.868369 GCCCACATACACACACACATACT 60.868 47.826 0.00 0.00 0.00 2.12
65 66 2.418628 GCCCACATACACACACACATAC 59.581 50.000 0.00 0.00 0.00 2.39
66 67 2.039084 TGCCCACATACACACACACATA 59.961 45.455 0.00 0.00 0.00 2.29
67 68 1.202867 TGCCCACATACACACACACAT 60.203 47.619 0.00 0.00 0.00 3.21
68 69 0.181350 TGCCCACATACACACACACA 59.819 50.000 0.00 0.00 0.00 3.72
69 70 1.199789 CATGCCCACATACACACACAC 59.800 52.381 0.00 0.00 33.67 3.82
70 71 1.202867 ACATGCCCACATACACACACA 60.203 47.619 0.00 0.00 33.67 3.72
71 72 1.533625 ACATGCCCACATACACACAC 58.466 50.000 0.00 0.00 33.67 3.82
72 73 3.054802 TCATACATGCCCACATACACACA 60.055 43.478 0.00 0.00 33.67 3.72
73 74 3.540617 TCATACATGCCCACATACACAC 58.459 45.455 0.00 0.00 33.67 3.82
74 75 3.199727 ACTCATACATGCCCACATACACA 59.800 43.478 0.00 0.00 33.67 3.72
75 76 3.561310 CACTCATACATGCCCACATACAC 59.439 47.826 0.00 0.00 33.67 2.90
76 77 3.454082 TCACTCATACATGCCCACATACA 59.546 43.478 0.00 0.00 33.67 2.29
77 78 4.071961 TCACTCATACATGCCCACATAC 57.928 45.455 0.00 0.00 33.67 2.39
78 79 4.561326 CGATCACTCATACATGCCCACATA 60.561 45.833 0.00 0.00 33.67 2.29
79 80 3.748083 GATCACTCATACATGCCCACAT 58.252 45.455 0.00 0.00 36.79 3.21
80 81 2.483538 CGATCACTCATACATGCCCACA 60.484 50.000 0.00 0.00 0.00 4.17
81 82 2.138320 CGATCACTCATACATGCCCAC 58.862 52.381 0.00 0.00 0.00 4.61
82 83 1.070601 CCGATCACTCATACATGCCCA 59.929 52.381 0.00 0.00 0.00 5.36
83 84 1.344438 TCCGATCACTCATACATGCCC 59.656 52.381 0.00 0.00 0.00 5.36
84 85 2.036475 ACTCCGATCACTCATACATGCC 59.964 50.000 0.00 0.00 0.00 4.40
85 86 3.055591 CACTCCGATCACTCATACATGC 58.944 50.000 0.00 0.00 0.00 4.06
86 87 4.313277 ACACTCCGATCACTCATACATG 57.687 45.455 0.00 0.00 0.00 3.21
87 88 5.111989 CAAACACTCCGATCACTCATACAT 58.888 41.667 0.00 0.00 0.00 2.29
88 89 4.494484 CAAACACTCCGATCACTCATACA 58.506 43.478 0.00 0.00 0.00 2.29
89 90 3.865745 CCAAACACTCCGATCACTCATAC 59.134 47.826 0.00 0.00 0.00 2.39
90 91 3.767131 TCCAAACACTCCGATCACTCATA 59.233 43.478 0.00 0.00 0.00 2.15
91 92 2.567169 TCCAAACACTCCGATCACTCAT 59.433 45.455 0.00 0.00 0.00 2.90
92 93 1.967779 TCCAAACACTCCGATCACTCA 59.032 47.619 0.00 0.00 0.00 3.41
93 94 2.338500 GTCCAAACACTCCGATCACTC 58.662 52.381 0.00 0.00 0.00 3.51
94 95 1.336887 CGTCCAAACACTCCGATCACT 60.337 52.381 0.00 0.00 0.00 3.41
95 96 1.068474 CGTCCAAACACTCCGATCAC 58.932 55.000 0.00 0.00 0.00 3.06
96 97 0.963225 TCGTCCAAACACTCCGATCA 59.037 50.000 0.00 0.00 0.00 2.92
97 98 2.074547 TTCGTCCAAACACTCCGATC 57.925 50.000 0.00 0.00 0.00 3.69
98 99 2.762535 ATTCGTCCAAACACTCCGAT 57.237 45.000 0.00 0.00 0.00 4.18
99 100 3.256383 TCTTATTCGTCCAAACACTCCGA 59.744 43.478 0.00 0.00 0.00 4.55
100 101 3.581755 TCTTATTCGTCCAAACACTCCG 58.418 45.455 0.00 0.00 0.00 4.63
101 102 4.153655 GGTTCTTATTCGTCCAAACACTCC 59.846 45.833 0.00 0.00 0.00 3.85
102 103 4.153655 GGGTTCTTATTCGTCCAAACACTC 59.846 45.833 0.00 0.00 0.00 3.51
103 104 4.070009 GGGTTCTTATTCGTCCAAACACT 58.930 43.478 0.00 0.00 0.00 3.55
104 105 3.816523 TGGGTTCTTATTCGTCCAAACAC 59.183 43.478 0.00 0.00 0.00 3.32
105 106 4.088056 TGGGTTCTTATTCGTCCAAACA 57.912 40.909 0.00 0.00 0.00 2.83
106 107 4.142469 CCATGGGTTCTTATTCGTCCAAAC 60.142 45.833 2.85 0.00 0.00 2.93
107 108 4.013728 CCATGGGTTCTTATTCGTCCAAA 58.986 43.478 2.85 0.00 0.00 3.28
108 109 3.264706 TCCATGGGTTCTTATTCGTCCAA 59.735 43.478 13.02 0.00 0.00 3.53
109 110 2.841266 TCCATGGGTTCTTATTCGTCCA 59.159 45.455 13.02 0.00 0.00 4.02
110 111 3.467803 CTCCATGGGTTCTTATTCGTCC 58.532 50.000 13.02 0.00 0.00 4.79
111 112 3.467803 CCTCCATGGGTTCTTATTCGTC 58.532 50.000 13.02 0.00 0.00 4.20
112 113 3.560636 CCTCCATGGGTTCTTATTCGT 57.439 47.619 13.02 0.00 0.00 3.85
124 125 1.609783 GTCCTTCCACCCTCCATGG 59.390 63.158 4.97 4.97 38.71 3.66
125 126 1.221840 CGTCCTTCCACCCTCCATG 59.778 63.158 0.00 0.00 0.00 3.66
126 127 0.546747 TTCGTCCTTCCACCCTCCAT 60.547 55.000 0.00 0.00 0.00 3.41
127 128 0.765135 TTTCGTCCTTCCACCCTCCA 60.765 55.000 0.00 0.00 0.00 3.86
128 129 0.036294 CTTTCGTCCTTCCACCCTCC 60.036 60.000 0.00 0.00 0.00 4.30
129 130 0.673956 GCTTTCGTCCTTCCACCCTC 60.674 60.000 0.00 0.00 0.00 4.30
130 131 1.375326 GCTTTCGTCCTTCCACCCT 59.625 57.895 0.00 0.00 0.00 4.34
131 132 2.033194 CGCTTTCGTCCTTCCACCC 61.033 63.158 0.00 0.00 0.00 4.61
132 133 2.033194 CCGCTTTCGTCCTTCCACC 61.033 63.158 0.00 0.00 0.00 4.61
133 134 1.005394 TCCGCTTTCGTCCTTCCAC 60.005 57.895 0.00 0.00 0.00 4.02
134 135 1.183030 TCTCCGCTTTCGTCCTTCCA 61.183 55.000 0.00 0.00 0.00 3.53
135 136 0.037605 TTCTCCGCTTTCGTCCTTCC 60.038 55.000 0.00 0.00 0.00 3.46
155 156 4.180946 CCCACGTCTCTCTCGCCG 62.181 72.222 0.00 0.00 0.00 6.46
157 158 3.827898 CCCCCACGTCTCTCTCGC 61.828 72.222 0.00 0.00 0.00 5.03
175 176 1.286248 ATAAAGTTCCCTGTCCCGCT 58.714 50.000 0.00 0.00 0.00 5.52
225 226 9.772973 AAGACGGCAAATTTATATATGTACTGA 57.227 29.630 0.00 0.00 0.00 3.41
237 238 4.303282 GCCAAGAAAAGACGGCAAATTTA 58.697 39.130 0.00 0.00 44.25 1.40
240 241 1.000843 GGCCAAGAAAAGACGGCAAAT 59.999 47.619 0.00 0.00 46.75 2.32
293 294 1.171308 CTTTGCATGTGGTGAGAGGG 58.829 55.000 0.00 0.00 0.00 4.30
593 596 4.764679 TTCAAACAAGATTGTGATCGGG 57.235 40.909 0.00 0.00 41.31 5.14
620 623 1.642037 GCACAGCATCAGCATGTCGT 61.642 55.000 0.00 0.00 45.49 4.34
625 628 0.942252 CATACGCACAGCATCAGCAT 59.058 50.000 0.00 0.00 45.49 3.79
626 629 0.108233 TCATACGCACAGCATCAGCA 60.108 50.000 0.00 0.00 45.49 4.41
627 630 0.580578 CTCATACGCACAGCATCAGC 59.419 55.000 0.00 0.00 42.56 4.26
628 631 2.214387 TCTCATACGCACAGCATCAG 57.786 50.000 0.00 0.00 0.00 2.90
629 632 2.270923 GTTCTCATACGCACAGCATCA 58.729 47.619 0.00 0.00 0.00 3.07
630 633 1.594862 GGTTCTCATACGCACAGCATC 59.405 52.381 0.00 0.00 0.00 3.91
640 643 7.201821 CCAATTTACCATTCAGGGTTCTCATAC 60.202 40.741 0.00 0.00 43.89 2.39
738 743 2.107726 AGTAACAGGTTTTCCCCCAGTC 59.892 50.000 0.00 0.00 41.86 3.51
740 745 2.971901 AGTAACAGGTTTTCCCCCAG 57.028 50.000 0.00 0.00 41.86 4.45
747 753 4.563786 GCTCTCAGCCTAGTAACAGGTTTT 60.564 45.833 0.00 0.00 38.05 2.43
843 849 3.431673 TGGTTACTCATGCCAACATCA 57.568 42.857 0.00 0.00 32.87 3.07
846 852 2.158534 ACCTTGGTTACTCATGCCAACA 60.159 45.455 0.00 0.00 37.36 3.33
875 881 7.086376 CCAGATTGTAAATGAGGAAACAACAG 58.914 38.462 0.00 0.00 34.89 3.16
878 884 6.549364 ACACCAGATTGTAAATGAGGAAACAA 59.451 34.615 0.00 0.00 36.37 2.83
912 918 2.478370 CCATTAGTGCGGCACAAAGATG 60.478 50.000 32.29 25.43 36.74 2.90
915 921 0.171007 CCCATTAGTGCGGCACAAAG 59.829 55.000 32.29 20.07 36.74 2.77
952 958 0.451783 GTAGGTTGCTCAAATGCCCG 59.548 55.000 0.00 0.00 0.00 6.13
972 978 1.372872 GGGCACCGACAATTTGCAC 60.373 57.895 1.79 0.00 40.86 4.57
1030 1036 1.153549 AGAATCGCCGCCAAGAGTC 60.154 57.895 0.00 0.00 0.00 3.36
1218 1224 1.817357 CTGCACAAATCAGCTCCTCA 58.183 50.000 0.00 0.00 0.00 3.86
1266 1272 5.500234 AGCTTACTGTGAATCTGGCAATAA 58.500 37.500 0.00 0.00 0.00 1.40
1284 1290 3.525268 TCATCAGAATGTGCGAGCTTA 57.475 42.857 0.00 0.00 37.40 3.09
1401 1407 3.364366 GCTCTGAACAACAAGAACATCGG 60.364 47.826 0.00 0.00 0.00 4.18
1491 1497 4.630644 TCTCTCCTTCACTTTGCTCATT 57.369 40.909 0.00 0.00 0.00 2.57
1570 1576 2.457366 AGCTTTCTGTAACCTCCGTG 57.543 50.000 0.00 0.00 0.00 4.94
1591 1597 3.708403 TTGAGAGTCATGACAGGCATT 57.292 42.857 27.02 5.64 34.15 3.56
1592 1598 3.199289 TGATTGAGAGTCATGACAGGCAT 59.801 43.478 27.02 12.08 37.85 4.40
1593 1599 2.568509 TGATTGAGAGTCATGACAGGCA 59.431 45.455 27.02 17.46 0.00 4.75
1594 1600 3.118847 TCTGATTGAGAGTCATGACAGGC 60.119 47.826 27.02 15.51 0.00 4.85
1595 1601 4.684877 CTCTGATTGAGAGTCATGACAGG 58.315 47.826 27.02 6.63 45.39 4.00
1648 1654 6.458206 CGTTTAGCTTCATAAGGCTTTGCATA 60.458 38.462 4.45 0.00 39.65 3.14
1714 1720 1.446907 AGCTCCTGACGAATTTGCTG 58.553 50.000 0.00 0.00 0.00 4.41
1715 1721 2.079925 GAAGCTCCTGACGAATTTGCT 58.920 47.619 0.00 0.00 0.00 3.91
1720 1726 0.895530 TTCGGAAGCTCCTGACGAAT 59.104 50.000 0.00 0.00 38.46 3.34
1788 1794 9.918630 AATTTGACATTCTCAGAAATAGTTTGG 57.081 29.630 0.00 0.00 0.00 3.28
1841 1847 0.391263 AAATCGCCGACCTCCTCAAC 60.391 55.000 0.00 0.00 0.00 3.18
1896 1902 1.068472 CAGAAGCAGCAAAAGCCTCTG 60.068 52.381 0.00 0.00 42.21 3.35
1897 1903 1.245732 CAGAAGCAGCAAAAGCCTCT 58.754 50.000 0.00 0.00 33.24 3.69
1898 1904 0.388263 GCAGAAGCAGCAAAAGCCTC 60.388 55.000 0.00 0.00 41.58 4.70
1899 1905 1.664306 GCAGAAGCAGCAAAAGCCT 59.336 52.632 0.00 0.00 41.58 4.58
1900 1906 4.256813 GCAGAAGCAGCAAAAGCC 57.743 55.556 0.00 0.00 41.58 4.35
1910 1916 0.933796 GCCTCGTTAGATGCAGAAGC 59.066 55.000 0.00 0.00 37.84 3.86
1911 1917 1.576356 GGCCTCGTTAGATGCAGAAG 58.424 55.000 0.00 0.00 39.36 2.85
1912 1918 0.178068 GGGCCTCGTTAGATGCAGAA 59.822 55.000 0.84 0.00 39.36 3.02
1926 1932 0.605589 GTTTGTAGTTGAGCGGGCCT 60.606 55.000 0.84 0.00 0.00 5.19
1952 1958 1.739466 CATGCTACTGTTGCGGTTGAT 59.261 47.619 9.51 0.00 0.00 2.57
2005 2011 2.096248 ACTTCAGACCATCGAGGAGAC 58.904 52.381 0.00 0.00 41.22 3.36
2184 2190 2.106338 TCAAGGAACTGTCTGCCATCAA 59.894 45.455 0.00 0.00 40.86 2.57
2253 2265 2.847327 TTGCTTCTTCAGGGACTCAG 57.153 50.000 0.00 0.00 34.60 3.35
2311 2323 2.202676 CGTTCTGCCTCGAGCTCC 60.203 66.667 6.99 0.00 44.23 4.70
2497 2509 3.192212 CCAGGTCAAGCATTTCTTTCTCC 59.808 47.826 0.00 0.00 31.27 3.71
2547 2559 1.468520 CAAATGGTTCGATGCGGAACT 59.531 47.619 12.81 0.00 44.45 3.01
2575 2587 4.083324 TCTCCATCAACAGCGTCAAAATTC 60.083 41.667 0.00 0.00 0.00 2.17
2578 2590 2.844946 TCTCCATCAACAGCGTCAAAA 58.155 42.857 0.00 0.00 0.00 2.44
2588 2600 4.063689 CTGAGTGCCATATCTCCATCAAC 58.936 47.826 0.00 0.00 0.00 3.18
2611 2623 5.645067 CACAAAATCTGAGCTATCCAAGACA 59.355 40.000 0.00 0.00 0.00 3.41
2622 2634 4.943705 TGGTATTCCTCACAAAATCTGAGC 59.056 41.667 0.00 0.00 34.84 4.26
2714 2726 8.863049 CAAATCAAATCTATTTGTGTAAGGCAC 58.137 33.333 13.58 0.00 45.49 5.01
2747 2759 3.257393 CACTCTGTAGGATGTCACTTGC 58.743 50.000 0.00 0.00 0.00 4.01
2755 2767 2.167281 CAGTGACCCACTCTGTAGGATG 59.833 54.545 0.00 0.00 43.43 3.51
2757 2769 1.427753 TCAGTGACCCACTCTGTAGGA 59.572 52.381 0.00 0.00 43.43 2.94
2807 2819 7.551974 ACATTCCAATTCTGAGTTCTCTACATG 59.448 37.037 0.00 0.00 0.00 3.21
2808 2820 7.551974 CACATTCCAATTCTGAGTTCTCTACAT 59.448 37.037 1.53 0.00 0.00 2.29
2815 2827 4.335416 TCCCACATTCCAATTCTGAGTTC 58.665 43.478 0.00 0.00 0.00 3.01
2834 2846 2.420687 CCTGAGGCAATAGTGAACTCCC 60.421 54.545 11.20 0.00 32.36 4.30
2861 2873 3.649073 TCAAGTGTGATTCGTCGTTCAT 58.351 40.909 4.43 0.00 0.00 2.57
2869 2881 3.675225 AGTCATCGTTCAAGTGTGATTCG 59.325 43.478 0.00 0.00 32.48 3.34
2873 2885 3.068165 AGTGAGTCATCGTTCAAGTGTGA 59.932 43.478 0.00 0.00 0.00 3.58
2916 2928 3.914426 TTTCTAGATCTTGGCCAGGTC 57.086 47.619 15.41 10.76 31.81 3.85
2917 2929 3.589288 AGTTTTCTAGATCTTGGCCAGGT 59.411 43.478 15.41 0.67 0.00 4.00
2918 2930 4.195416 GAGTTTTCTAGATCTTGGCCAGG 58.805 47.826 8.96 8.96 0.00 4.45
2919 2931 4.836825 TGAGTTTTCTAGATCTTGGCCAG 58.163 43.478 5.11 0.00 0.00 4.85
2920 2932 4.532126 TCTGAGTTTTCTAGATCTTGGCCA 59.468 41.667 0.00 0.00 0.00 5.36
2921 2933 5.091261 TCTGAGTTTTCTAGATCTTGGCC 57.909 43.478 0.00 0.00 0.00 5.36
2922 2934 7.414984 CCAATTCTGAGTTTTCTAGATCTTGGC 60.415 40.741 0.00 0.00 32.12 4.52
2923 2935 7.826252 TCCAATTCTGAGTTTTCTAGATCTTGG 59.174 37.037 0.00 0.00 36.24 3.61
2924 2936 8.783833 TCCAATTCTGAGTTTTCTAGATCTTG 57.216 34.615 0.00 0.00 0.00 3.02
2925 2937 9.972106 ATTCCAATTCTGAGTTTTCTAGATCTT 57.028 29.630 0.00 0.00 0.00 2.40
2926 2938 9.393512 CATTCCAATTCTGAGTTTTCTAGATCT 57.606 33.333 0.00 0.00 0.00 2.75
2927 2939 9.171877 ACATTCCAATTCTGAGTTTTCTAGATC 57.828 33.333 0.00 0.00 0.00 2.75
2928 2940 9.171877 GACATTCCAATTCTGAGTTTTCTAGAT 57.828 33.333 0.00 0.00 0.00 1.98
2929 2941 8.156820 TGACATTCCAATTCTGAGTTTTCTAGA 58.843 33.333 0.00 0.00 0.00 2.43
2930 2942 8.327941 TGACATTCCAATTCTGAGTTTTCTAG 57.672 34.615 0.00 0.00 0.00 2.43
2931 2943 8.156820 TCTGACATTCCAATTCTGAGTTTTCTA 58.843 33.333 0.00 0.00 0.00 2.10
2932 2944 7.000472 TCTGACATTCCAATTCTGAGTTTTCT 59.000 34.615 0.00 0.00 0.00 2.52
2933 2945 7.040823 ACTCTGACATTCCAATTCTGAGTTTTC 60.041 37.037 4.96 0.00 42.57 2.29
2934 2946 6.774656 ACTCTGACATTCCAATTCTGAGTTTT 59.225 34.615 4.96 0.00 42.57 2.43
2935 2947 6.302269 ACTCTGACATTCCAATTCTGAGTTT 58.698 36.000 4.96 0.00 42.57 2.66
2936 2948 5.874093 ACTCTGACATTCCAATTCTGAGTT 58.126 37.500 4.96 0.00 42.57 3.01
2937 2949 5.495926 ACTCTGACATTCCAATTCTGAGT 57.504 39.130 4.96 4.96 41.25 3.41
2938 2950 5.936372 TGAACTCTGACATTCCAATTCTGAG 59.064 40.000 0.00 0.00 39.78 3.35
2939 2951 5.702670 GTGAACTCTGACATTCCAATTCTGA 59.297 40.000 0.00 0.00 0.00 3.27
2940 2952 5.704515 AGTGAACTCTGACATTCCAATTCTG 59.295 40.000 0.00 0.00 0.00 3.02
2941 2953 5.874093 AGTGAACTCTGACATTCCAATTCT 58.126 37.500 0.00 0.00 0.00 2.40
2942 2954 7.856145 ATAGTGAACTCTGACATTCCAATTC 57.144 36.000 0.00 0.00 0.00 2.17
2943 2955 7.362401 GCAATAGTGAACTCTGACATTCCAATT 60.362 37.037 0.00 0.00 0.00 2.32
2944 2956 6.094603 GCAATAGTGAACTCTGACATTCCAAT 59.905 38.462 0.00 0.00 0.00 3.16
2945 2957 5.412594 GCAATAGTGAACTCTGACATTCCAA 59.587 40.000 0.00 0.00 0.00 3.53
2946 2958 4.937620 GCAATAGTGAACTCTGACATTCCA 59.062 41.667 0.00 0.00 0.00 3.53
2947 2959 4.333926 GGCAATAGTGAACTCTGACATTCC 59.666 45.833 0.00 0.00 0.00 3.01
2948 2960 5.181748 AGGCAATAGTGAACTCTGACATTC 58.818 41.667 0.00 0.00 0.00 2.67
2949 2961 5.171339 AGGCAATAGTGAACTCTGACATT 57.829 39.130 0.00 0.00 0.00 2.71
2950 2962 4.223700 TGAGGCAATAGTGAACTCTGACAT 59.776 41.667 13.80 0.00 33.70 3.06
2951 2963 3.578282 TGAGGCAATAGTGAACTCTGACA 59.422 43.478 13.80 0.00 33.70 3.58
2952 2964 4.180057 CTGAGGCAATAGTGAACTCTGAC 58.820 47.826 13.80 0.00 34.27 3.51
2953 2965 3.196469 CCTGAGGCAATAGTGAACTCTGA 59.804 47.826 17.37 1.61 34.27 3.27
2954 2966 3.196469 TCCTGAGGCAATAGTGAACTCTG 59.804 47.826 13.80 12.93 33.70 3.35
2955 2967 3.445008 TCCTGAGGCAATAGTGAACTCT 58.555 45.455 13.80 0.00 33.70 3.24
2956 2968 3.895232 TCCTGAGGCAATAGTGAACTC 57.105 47.619 0.00 1.27 33.36 3.01
2957 2969 3.327757 TGTTCCTGAGGCAATAGTGAACT 59.672 43.478 0.00 0.00 33.57 3.01
2958 2970 3.437049 GTGTTCCTGAGGCAATAGTGAAC 59.563 47.826 0.00 0.00 33.15 3.18
2959 2971 3.072330 TGTGTTCCTGAGGCAATAGTGAA 59.928 43.478 0.00 0.00 0.00 3.18
2960 2972 2.637382 TGTGTTCCTGAGGCAATAGTGA 59.363 45.455 0.00 0.00 0.00 3.41
2961 2973 3.057969 TGTGTTCCTGAGGCAATAGTG 57.942 47.619 0.00 0.00 0.00 2.74
2962 2974 3.264193 TCATGTGTTCCTGAGGCAATAGT 59.736 43.478 0.00 0.00 0.00 2.12
2963 2975 3.877559 TCATGTGTTCCTGAGGCAATAG 58.122 45.455 0.00 0.00 0.00 1.73
2964 2976 3.998913 TCATGTGTTCCTGAGGCAATA 57.001 42.857 0.00 0.00 0.00 1.90
2965 2977 2.821969 GTTCATGTGTTCCTGAGGCAAT 59.178 45.455 0.00 0.00 0.00 3.56
2966 2978 2.229792 GTTCATGTGTTCCTGAGGCAA 58.770 47.619 0.00 0.00 0.00 4.52
2967 2979 1.877680 CGTTCATGTGTTCCTGAGGCA 60.878 52.381 0.00 0.00 0.00 4.75
2968 2980 0.798776 CGTTCATGTGTTCCTGAGGC 59.201 55.000 0.00 0.00 0.00 4.70
2969 2981 2.455674 TCGTTCATGTGTTCCTGAGG 57.544 50.000 0.00 0.00 0.00 3.86
2970 2982 3.588955 TCATCGTTCATGTGTTCCTGAG 58.411 45.455 0.00 0.00 33.66 3.35
2971 2983 3.676291 TCATCGTTCATGTGTTCCTGA 57.324 42.857 0.00 0.00 33.66 3.86
2972 2984 4.392754 TGATTCATCGTTCATGTGTTCCTG 59.607 41.667 0.00 0.00 33.66 3.86
2973 2985 4.393062 GTGATTCATCGTTCATGTGTTCCT 59.607 41.667 0.00 0.00 33.66 3.36
2974 2986 4.154015 TGTGATTCATCGTTCATGTGTTCC 59.846 41.667 0.00 0.00 33.66 3.62
2975 2987 5.082059 GTGTGATTCATCGTTCATGTGTTC 58.918 41.667 0.00 0.00 33.66 3.18
2976 2988 4.756642 AGTGTGATTCATCGTTCATGTGTT 59.243 37.500 0.00 0.00 33.66 3.32
2977 2989 4.318332 AGTGTGATTCATCGTTCATGTGT 58.682 39.130 0.00 0.00 33.66 3.72
2978 2990 4.934075 AGTGTGATTCATCGTTCATGTG 57.066 40.909 0.00 0.00 33.66 3.21
2979 2991 4.996758 TCAAGTGTGATTCATCGTTCATGT 59.003 37.500 0.00 0.00 33.66 3.21
2980 2992 5.535043 TCAAGTGTGATTCATCGTTCATG 57.465 39.130 0.00 0.00 0.00 3.07
2981 2993 6.427853 TCTTTCAAGTGTGATTCATCGTTCAT 59.572 34.615 0.00 0.00 32.48 2.57
2982 2994 5.757808 TCTTTCAAGTGTGATTCATCGTTCA 59.242 36.000 0.00 0.00 32.48 3.18
2983 2995 6.228273 TCTTTCAAGTGTGATTCATCGTTC 57.772 37.500 0.00 0.00 32.48 3.95
2984 2996 6.427853 TCATCTTTCAAGTGTGATTCATCGTT 59.572 34.615 0.00 0.00 32.48 3.85
2985 2997 5.934043 TCATCTTTCAAGTGTGATTCATCGT 59.066 36.000 0.00 0.00 32.48 3.73
2986 2998 6.091849 AGTCATCTTTCAAGTGTGATTCATCG 59.908 38.462 0.00 0.00 32.48 3.84
2987 2999 7.118825 TGAGTCATCTTTCAAGTGTGATTCATC 59.881 37.037 13.50 0.00 35.69 2.92
2988 3000 6.938596 TGAGTCATCTTTCAAGTGTGATTCAT 59.061 34.615 13.50 0.66 35.69 2.57
2989 3001 6.290605 TGAGTCATCTTTCAAGTGTGATTCA 58.709 36.000 13.50 13.50 36.82 2.57
2990 3002 6.791887 TGAGTCATCTTTCAAGTGTGATTC 57.208 37.500 0.00 10.42 33.62 2.52
2991 3003 7.446319 TCATTGAGTCATCTTTCAAGTGTGATT 59.554 33.333 0.00 0.00 36.81 2.57
2992 3004 6.938596 TCATTGAGTCATCTTTCAAGTGTGAT 59.061 34.615 0.00 0.00 36.81 3.06
2993 3005 6.290605 TCATTGAGTCATCTTTCAAGTGTGA 58.709 36.000 0.00 0.00 36.81 3.58
2994 3006 6.426025 TCTCATTGAGTCATCTTTCAAGTGTG 59.574 38.462 13.23 0.00 36.81 3.82
2995 3007 6.528321 TCTCATTGAGTCATCTTTCAAGTGT 58.472 36.000 13.23 0.00 36.81 3.55
2996 3008 6.872547 TCTCTCATTGAGTCATCTTTCAAGTG 59.127 38.462 13.23 0.00 43.13 3.16
2997 3009 7.002250 TCTCTCATTGAGTCATCTTTCAAGT 57.998 36.000 13.23 0.00 43.13 3.16
2998 3010 7.764901 TGATCTCTCATTGAGTCATCTTTCAAG 59.235 37.037 13.23 0.22 43.13 3.02
2999 3011 7.618137 TGATCTCTCATTGAGTCATCTTTCAA 58.382 34.615 13.23 0.00 43.13 2.69
3000 3012 7.179076 TGATCTCTCATTGAGTCATCTTTCA 57.821 36.000 13.23 6.02 43.13 2.69
3001 3013 7.385752 GGATGATCTCTCATTGAGTCATCTTTC 59.614 40.741 27.61 20.51 45.91 2.62
3002 3014 7.147532 TGGATGATCTCTCATTGAGTCATCTTT 60.148 37.037 27.61 16.48 45.91 2.52
3003 3015 6.326843 TGGATGATCTCTCATTGAGTCATCTT 59.673 38.462 27.61 20.14 45.91 2.40
3004 3016 5.839606 TGGATGATCTCTCATTGAGTCATCT 59.160 40.000 27.61 15.37 45.91 2.90
3005 3017 6.099159 TGGATGATCTCTCATTGAGTCATC 57.901 41.667 24.24 24.24 45.91 2.92
3006 3018 6.099990 ACTTGGATGATCTCTCATTGAGTCAT 59.900 38.462 14.70 14.70 42.27 3.06
3007 3019 5.424573 ACTTGGATGATCTCTCATTGAGTCA 59.575 40.000 13.23 10.16 42.27 3.41
3008 3020 5.754406 CACTTGGATGATCTCTCATTGAGTC 59.246 44.000 13.23 4.90 42.27 3.36
3009 3021 5.424573 TCACTTGGATGATCTCTCATTGAGT 59.575 40.000 13.23 0.00 42.27 3.41
3010 3022 5.915175 TCACTTGGATGATCTCTCATTGAG 58.085 41.667 7.38 7.38 42.27 3.02
3011 3023 5.945144 TCACTTGGATGATCTCTCATTGA 57.055 39.130 0.00 0.00 42.27 2.57
3026 3038 2.757099 GCCAGGCCCATCACTTGG 60.757 66.667 0.00 0.00 46.00 3.61
3027 3039 2.757099 GGCCAGGCCCATCACTTG 60.757 66.667 21.62 0.00 44.06 3.16
3051 3165 5.926542 CGACACTCCAATTCTGAGTTTTCTA 59.073 40.000 4.73 0.00 41.02 2.10
3070 3184 2.000447 GGCAATAGTGAACTCCGACAC 59.000 52.381 0.00 0.00 37.30 3.67
3086 3200 2.806745 CGTTCAAGTCTTCCTGAGGCAA 60.807 50.000 0.00 0.00 30.26 4.52
3118 3232 2.092538 CCCATCACTTGGCTGATCTCTT 60.093 50.000 0.00 0.00 44.97 2.85
3127 3241 2.757099 CCAGGCCCATCACTTGGC 60.757 66.667 0.00 0.00 44.97 4.52
3151 3265 2.841215 TCCAGTTCTGGGTTTTGTACG 58.159 47.619 17.37 0.00 0.00 3.67
3155 3269 2.289010 GGCATTCCAGTTCTGGGTTTTG 60.289 50.000 17.37 11.19 0.00 2.44
3167 3281 1.466167 CAGTGAACTTCGGCATTCCAG 59.534 52.381 0.00 0.00 0.00 3.86
3168 3282 1.202758 ACAGTGAACTTCGGCATTCCA 60.203 47.619 0.00 0.00 0.00 3.53
3169 3283 1.523758 ACAGTGAACTTCGGCATTCC 58.476 50.000 0.00 0.00 0.00 3.01
3177 3291 0.040958 CTGCGGCAACAGTGAACTTC 60.041 55.000 3.44 0.00 32.78 3.01
3186 3300 2.281484 GGTCTTCCTGCGGCAACA 60.281 61.111 3.44 0.00 0.00 3.33
3187 3301 2.032681 AGGTCTTCCTGCGGCAAC 59.967 61.111 3.44 0.00 43.33 4.17
3203 3317 6.758416 TGTAATGAGACGGATTCATCTTTCAG 59.242 38.462 0.00 0.00 34.30 3.02
3217 3331 6.331170 TCATCATTTCGTTGTAATGAGACG 57.669 37.500 0.00 0.00 43.15 4.18
3252 3366 6.418057 AGCCAACATATTTTTGGTTCTCAA 57.582 33.333 12.53 0.00 44.77 3.02
3259 3373 5.289193 CGAACATGAGCCAACATATTTTTGG 59.711 40.000 0.00 8.11 45.60 3.28
3275 3389 0.173255 TCATCTGAGCGCGAACATGA 59.827 50.000 12.10 7.69 0.00 3.07
3295 3409 6.431543 TGCTTTCCACGGAACTAATTTTATCA 59.568 34.615 0.00 0.00 33.41 2.15
3311 3425 8.003784 CGAAATTTCTTGTTTAATGCTTTCCAC 58.996 33.333 15.92 0.00 0.00 4.02
3336 3450 5.218885 CCATGAGTCTACTATTCAAGAGCG 58.781 45.833 0.00 0.00 0.00 5.03
3353 3467 1.817357 TCTGCTTCAAGTGCCATGAG 58.183 50.000 0.00 0.00 0.00 2.90
3423 3537 6.989169 AGTTATCTCCTGCACATATTGTTCTC 59.011 38.462 0.00 0.00 0.00 2.87
3475 3589 3.632604 TCCTATCTCTCTGCTTGGTAACG 59.367 47.826 0.00 0.00 42.51 3.18
3477 3591 4.610333 TGTCCTATCTCTCTGCTTGGTAA 58.390 43.478 0.00 0.00 0.00 2.85
3482 3596 2.958355 GAGCTGTCCTATCTCTCTGCTT 59.042 50.000 0.00 0.00 35.80 3.91
3603 3717 8.346300 CCTGATACACATCCTATAAGCTATACG 58.654 40.741 0.00 0.00 0.00 3.06
3729 3851 3.873952 GAGATTATTGACTGAGGCGCTTT 59.126 43.478 7.64 0.00 0.00 3.51
3733 3855 3.785486 TGTGAGATTATTGACTGAGGCG 58.215 45.455 0.00 0.00 0.00 5.52
3798 3923 6.683974 ATATAACACCAAGTGACTGAATGC 57.316 37.500 0.96 0.00 36.96 3.56
3850 3975 6.371809 TGTTGCTGTAGGTTACAAGAAAAG 57.628 37.500 0.00 0.00 38.38 2.27
3925 4050 5.011840 ACAAGGTCAGAGGTTACTTAAGGAC 59.988 44.000 7.53 5.14 0.00 3.85
4011 4138 2.254546 TCGACACTGCTGGAACAATT 57.745 45.000 0.00 0.00 38.70 2.32
4174 4301 0.984230 CTTCCCAACTGGAGGCACTA 59.016 55.000 0.00 0.00 46.24 2.74
4196 4323 1.804372 GCCACAGAGAGATTACTGCCG 60.804 57.143 0.00 0.00 37.61 5.69
4209 4336 0.396974 AGGTTTTGCAAGGCCACAGA 60.397 50.000 19.23 0.00 0.00 3.41
4215 4342 1.204704 GTATCCCAGGTTTTGCAAGGC 59.795 52.381 0.00 0.00 0.00 4.35
4256 4383 3.379445 TTCCCCAGTCGCCTCGTC 61.379 66.667 0.00 0.00 0.00 4.20
4257 4384 3.692406 GTTCCCCAGTCGCCTCGT 61.692 66.667 0.00 0.00 0.00 4.18
4263 4395 0.247736 CTTCTCCTGTTCCCCAGTCG 59.752 60.000 0.00 0.00 39.74 4.18
4296 4428 1.754226 CACTTCTCCTCCAGCCTAGTC 59.246 57.143 0.00 0.00 0.00 2.59
4323 4455 2.096496 CGTGCTATTTTCTGCTCCAAGG 59.904 50.000 0.00 0.00 0.00 3.61
4327 4459 1.328986 GCTCGTGCTATTTTCTGCTCC 59.671 52.381 1.41 0.00 36.03 4.70
4328 4460 1.005557 CGCTCGTGCTATTTTCTGCTC 60.006 52.381 7.97 0.00 36.97 4.26
4359 4491 2.671963 GCTGTCAACCCGGGGAAC 60.672 66.667 27.92 19.56 0.00 3.62
4400 4532 1.915078 CTGAAATCCGAGGCCCTGGT 61.915 60.000 10.50 0.00 0.00 4.00
4467 4599 3.885297 ACAAGATGAACTTCAACTGGGTG 59.115 43.478 8.02 3.90 36.61 4.61
4468 4600 4.170468 ACAAGATGAACTTCAACTGGGT 57.830 40.909 8.02 5.11 36.61 4.51
4469 4601 4.022849 GGAACAAGATGAACTTCAACTGGG 60.023 45.833 8.02 4.61 36.61 4.45
4470 4602 4.022849 GGGAACAAGATGAACTTCAACTGG 60.023 45.833 2.53 2.55 36.61 4.00
4471 4603 4.022849 GGGGAACAAGATGAACTTCAACTG 60.023 45.833 2.53 0.69 36.61 3.16
4472 4604 4.141158 AGGGGAACAAGATGAACTTCAACT 60.141 41.667 0.00 0.00 36.61 3.16
4473 4605 4.145052 AGGGGAACAAGATGAACTTCAAC 58.855 43.478 0.00 0.00 36.61 3.18
4474 4606 4.141274 TGAGGGGAACAAGATGAACTTCAA 60.141 41.667 0.00 0.00 36.61 2.69
4475 4607 3.394274 TGAGGGGAACAAGATGAACTTCA 59.606 43.478 0.00 0.00 36.61 3.02
4476 4608 4.021102 TGAGGGGAACAAGATGAACTTC 57.979 45.455 0.00 0.00 36.61 3.01
4477 4609 4.593956 GATGAGGGGAACAAGATGAACTT 58.406 43.478 0.00 0.00 39.70 2.66
4478 4610 3.369892 CGATGAGGGGAACAAGATGAACT 60.370 47.826 0.00 0.00 0.00 3.01
4479 4611 2.939103 CGATGAGGGGAACAAGATGAAC 59.061 50.000 0.00 0.00 0.00 3.18
4480 4612 2.571653 ACGATGAGGGGAACAAGATGAA 59.428 45.455 0.00 0.00 0.00 2.57
4481 4613 2.168521 GACGATGAGGGGAACAAGATGA 59.831 50.000 0.00 0.00 0.00 2.92
4482 4614 2.093500 TGACGATGAGGGGAACAAGATG 60.093 50.000 0.00 0.00 0.00 2.90
4483 4615 2.093447 GTGACGATGAGGGGAACAAGAT 60.093 50.000 0.00 0.00 0.00 2.40
4484 4616 1.275291 GTGACGATGAGGGGAACAAGA 59.725 52.381 0.00 0.00 0.00 3.02
4485 4617 1.001974 TGTGACGATGAGGGGAACAAG 59.998 52.381 0.00 0.00 0.00 3.16
4486 4618 1.052617 TGTGACGATGAGGGGAACAA 58.947 50.000 0.00 0.00 0.00 2.83
4487 4619 0.320374 GTGTGACGATGAGGGGAACA 59.680 55.000 0.00 0.00 0.00 3.18
4488 4620 0.391263 GGTGTGACGATGAGGGGAAC 60.391 60.000 0.00 0.00 0.00 3.62
4489 4621 1.884075 CGGTGTGACGATGAGGGGAA 61.884 60.000 0.00 0.00 35.47 3.97
4490 4622 2.348104 CGGTGTGACGATGAGGGGA 61.348 63.158 0.00 0.00 35.47 4.81
4491 4623 2.184322 CGGTGTGACGATGAGGGG 59.816 66.667 0.00 0.00 35.47 4.79
4492 4624 2.509336 GCGGTGTGACGATGAGGG 60.509 66.667 0.00 0.00 35.47 4.30
4493 4625 2.880879 CGCGGTGTGACGATGAGG 60.881 66.667 0.00 0.00 35.47 3.86
4494 4626 2.152699 GTCGCGGTGTGACGATGAG 61.153 63.158 6.13 0.00 40.90 2.90
4495 4627 2.126618 GTCGCGGTGTGACGATGA 60.127 61.111 6.13 0.00 40.90 2.92
4496 4628 1.944699 CTTGTCGCGGTGTGACGATG 61.945 60.000 6.13 0.00 44.86 3.84
4497 4629 1.733041 CTTGTCGCGGTGTGACGAT 60.733 57.895 6.13 0.00 44.86 3.73
4498 4630 2.354188 CTTGTCGCGGTGTGACGA 60.354 61.111 6.13 3.50 44.86 4.20
4499 4631 3.403057 CCTTGTCGCGGTGTGACG 61.403 66.667 6.13 0.00 44.86 4.35
4500 4632 3.041940 CCCTTGTCGCGGTGTGAC 61.042 66.667 6.13 3.64 42.60 3.67
4501 4633 4.308458 CCCCTTGTCGCGGTGTGA 62.308 66.667 6.13 0.00 0.00 3.58
4516 4648 2.747855 CGTCTGAAGCTTGCCCCC 60.748 66.667 2.10 0.00 0.00 5.40
4517 4649 1.743252 CTCGTCTGAAGCTTGCCCC 60.743 63.158 2.10 0.00 0.00 5.80
4518 4650 1.004440 ACTCGTCTGAAGCTTGCCC 60.004 57.895 2.10 0.00 0.00 5.36
4519 4651 1.347817 CGACTCGTCTGAAGCTTGCC 61.348 60.000 2.10 0.00 0.00 4.52
4520 4652 0.387367 TCGACTCGTCTGAAGCTTGC 60.387 55.000 2.10 0.00 0.00 4.01
4521 4653 1.332178 GTCGACTCGTCTGAAGCTTG 58.668 55.000 2.10 0.00 0.00 4.01
4522 4654 0.952280 TGTCGACTCGTCTGAAGCTT 59.048 50.000 17.92 0.00 0.00 3.74
4523 4655 0.519519 CTGTCGACTCGTCTGAAGCT 59.480 55.000 17.92 0.00 0.00 3.74
4524 4656 3.008664 CTGTCGACTCGTCTGAAGC 57.991 57.895 17.92 0.00 0.00 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.