>input_sequence_31200
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---------------------------------------------ATGGCTGCGAAAGCTCGTGCGAGGCCGCGAGACTC
TTGGCGGCGATTCTGGCTGGTGCTGGGCCATGCCTTGAGCGAGTGCTTCCTCATCGTAATGCTGCTTGTGGTCGCCGTGG
TGTCGTATACCGCGACGAGGTTCGCGCGCATCTGCAGGATCCGGTCACCGTGCATGCTGTGCTCAAGATTGGACAAGGTT
CTGCATGGCAAGGCCTGGTTCTCTGAGGAGCTGATTTGTGCAGCACACAGGGTGGAAATCGCGCGTTTATCTTATTGCCA
GATTCACAGTAAGCTCGCACATTCTGATGATCTATGTGGAAAGTGCTTGCTTTCATGTTCTGGACCAGTTGGTAAGCCAG
GTAACCCAACAAACATGAGCATTAAGGAGAAGGCGGGGCACACACACCGATGTTCTTGTTGTTCAGAGCCATTCACGAAG
AGAGACAACGCGCACAAGTTATTTGAGGAGGTGAATGGCAGGTCTCAGAATGATGGAATGAGCAAAGTGAAGGAGAGAAG
CATGGCCACGGCAAGCGTTGGGCATTCTTCGGATGAGGATTTTGATCAATTGCCTCACGGAGGTTACAGAAAGCTAAATG
CCTGTCATGACTCTCAATCAGAGATTCATGTCTCAGATGATGATGTTGGCGGCTATGCAAAGCCTTATGAAGCTAAACGT
CGAACCAGAGATCTCGACGAGCACTCGAAGGCTGTGCCTCAGCAAATTCGTCAGGAGCTTCCGAAAGAGAAAAGTATGTA
TCGTCTTCCAAAATGCTATAATCCTTATCTAACCCAAACTATTTCTGAGAATGTCAAATTTGTGAAATGTAGCTTTTCTG
GTTGGTGTTGAGGAGGTCGGCGATTTAGAGGGTGTTTCACGAAGCCCTGACCAGGAAGCTGCAGAGGCTTTTGCTGCTTC
TGCATCTAACGAGGCCCGCTCAACTACAAACCATTATATCAACCGCAACAGTAGCATGAAGAATGCTCCTGGTGGTAGAG
GCAATCTTAGGTCTCCTCGATGGTCTGAAGTAATCTCCGCTAAGGAAACCAATTCAACAACACATGAAGAAGTGAAGACA
TTCATGTCCCAGTTGTCTTCTGCGCGAGGCCTCGATGGTCCTTGGAGTGAGGTGGCTGCTAGCCCCAGAATCAGCATACA
GATTGATGAGTACAGTCAATCTGATGCCATTGATGGCAGACAGTTCCTTGATCTGGAACCATCTGATG------TTCCAA
CTGAAGCTGAAGGTGAAATCTCCCCTGAGTCCCTGAAGAAGCAATGCGAGCTTAACAAGAAAAAACTAAGCATCCTTTAT
AAGGAGCTCGAGGCAGAACGGAGTGCTTCGTCTGTTGCAGCAAGTGAAGCGATGGCTATGATCAATAGGTTGCAAGTGGA
AAAGGCTGCAATGCACATGGAGGCGCTGCAGTATCTCCGGATGATGGAAGAGCAGGCTGATCATGACCAAGAAGAAATTG
GAAAGCTAAATGACTTGCTTACAGAAAGGGAGAAAGAAATGCTTGACCTGGAAGCTGAACTCGAAAGTTATGAGAGCAAG
TTCCGCATCGAACCATTTGATCTCGGGAATTTTGACGCTGTTGATGGAGATATGGCACTCAGTGTCTTGGATAGCTCAGA
TTTTGTGAGGAATACCATCTTTGGTTTTGAAGATGAGAAGGCCAAAATTTTGGAATCCTTGAGCAGATTAGAGGAAACAC
TTGGCGTGCCTTACACAAATAGATTTGATTTGGGTGGCGCAAGTGACATCCTACAGAGTGGGTCACTGAGAGATCATCCA
AGTGATGGGCCTGGCCAACATGTAGAGAACTCAGAATTGGAATGTGGGAGTTCACTATTGCCTCAGGAGCACATGAACGA
CGAATCACACTTGAACGATGACTCACTGAGAGATCATCCAAGTGATGGACCTGGCCAAGATCTAGAAAACTCAGAATTGG
AATGTCAGAGTTCACTATTGCCTCAGGAACACATGAACGATGAATCACACTTGAAAGATGACTCAATGAGAGATCATCCA
AGTGATGGGCCTGGCCAA--------------------------------------------------------------
----------------------------------------CATGTAGAAAACTCAGAATTGGAGTGTCGGAGTTCACTAT
TGCCTCAGGAAGACTTGAACGATGAATCACTAAGAGATCAGCCAAGTGATGGGCCTGGCCAATACGTACAAAACCCAGAA
CTGGAATGCCGAAGTTCACTGTTGCCGCAGGAAGACCTGAAAGATGAATCCGTCTCATTACAACGAAATGATGAAAATCA
ATCTGTTGAGAACCAAAAATATGTTGGCTCATGTTCGCGCTCAGATGATGATAAAATTAGTTCCGTGGAAAGCATTAAAC
AAGAAATTTCGCTCTTGAATAGTAGACTCATGGCACTTGAAGCAGATCAGAAGTTTCTCAAGCAGATATTGAGTTCTCTT
AAATGTAGTAGTGATGGAGAACAATATGTGCAGGAGATAACTAGTCATTTGAGGGAGCTGCGAAGAATCGTTACCAAGCA
GAGAGATAGGACAGCTCTATGAGCTCAAAATTATTCAGCATTCAGAAGGTAATAAT------------------------
--------------------------------------------------------------------------------
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----------------------------------
>chr4A_1_TraesCS4A01G023700
AAAATATTGTATTGGTTTGGAGATGCTCGTAGAAATAATGTGTGTGTGCGCGTTTATAAAGATGAGTATGTGTGTGTGTA
TGTGGGCATGTATGAGTGATCGGAGTGTTTGGACGAATAAGAACCCATGGAGGGTGGAAGGACGAAAGCGGAGAACGGCG
AGAGAGACGTGGGGGAGCGGGACAGGGAACTTTATATATTTTTTTAAGTTCTTTTTATTTATTATTCAGTACATATATAA
ATTTGCCGTCTTTTCTTGGCCATGGTAAGGTGAGGCTATGCTTAAATCTCTCACCCTCTCACCACATGCAAAGGTTAGAG
AGAGAAATGCGGGGACAAACGGCGGGCGCGGGCACCCTGCTCCCTCTCT--CCCCTCTCCAATCCTACGGAGAATGGGAG
CGAGCCATTTTCCCTCCTGTTTACAACCAAGAACCAAGACTTCCTCCAAACCTCTTTGGGGATCTTTTCCCCGCATTTCT
GGGCCTCCCGCCCGATCCCGCCATACGCCCCTCTCCCGCATCCGCCCGAGCTGTTGATCTGGAGAATCGCAGCTTCTTGA
TTTGAGATCCGCAGCAGCACCGGTATGTTCCGCTTCCCGATCACAATCTTGTTTGAATCTGCACGACATGCTGATGCTGT
GCGTATGAGAACCCTGAATGGTAAATTGGTGCGATTTCTTTGCAGGATAGATTAGATCAAAA--ATCGAGGGTTCTTGCC
ACCAATCTGTATGTGCATTGGCGACT-GGGGGAAAACCTGTTACTAGGCTGAGAGCATCGTGATTATTGCAGAAATTTGG
CTCATCGGCAAAGTTTCGTTGGGAGAAAAGGTTCCATCTTATGGAACCTGATGTTGGCATGAGTAACCAAGGTTGCAGGA
CTGTTGTTTCCTCATTTACAATCTGGTGTGATCTGAGCATCTTTGTGCCGCACTAATGGGAGGTTCACAGGACAGGCCGG
GCATTTGAGCAACCTACGTGCAAATTGTCGGTGCCCTGATCTTTCATGGCTGCGAAAGCTCGTGCGAGGCCGCGAGACTC
TTGGCGGCGATTCTGGCTGGTGCTGGGCCATGCCTTGAGCGAGTGCTTCCTCATCGTAATGCTGCTTGTGGTCGCCGTGG
TGTCGTATACCGCGACGAGGTTCGCGCGCATCTGCAGGATCCGGTCACCGTGCATGCTGTGCTCAAGATTGGACAAGGTT
CTGCATGGCAAGGCCTGGTTCTCTGAGGAGCTGATTTGTGCAGCACACAGGGTGGAAATCGCGCGTTTATCTTATTGCCA
GATTCACAGTAAGCTCGCACATTCTGATGATCTATGTGGAAAGTGCTTGCTTTCATGTTCTGGACCAGTTGGTAAGCCAG
GTAACCCAACAAACATGAGCATTAAGGAGAAGGCGGGGCACACACACCGATGTTCTTGTTGTTCAGAGCCATTCACGAAG
AGAGACAACGCGCACAAGTTATTTGAGGAGGTGAATGGCAGGTCTCAGAATGATGGAATGAGCAAAGTGAAGGAGAGAAG
CATGGCCACGGCAAGCGTTGGGCATTCTTCGGATGAGGATTTTGATCAATTGCCTCACGGAGGTTACAGAAAGCTAAATG
CCTGTCATGACTCTCAATCAGAGATTCATGTCTCAGATGATGATGTTGGCGGCTATGCAAAGCCTTATGAAGCTAAACGT
CGAACCAGAGATCTCGACGAGCACTCGAAGGCTGTGCCTCAGCAAATTCGTCAGGAGCTTCCGAAAGAGAAAAGTATGTA
TCGTCTTCCAAAATGCTATAATCCTTATCTAACCCAAACTATTTCTGAGAATGTCAAATTTGTGAAATGTAGCTTTTCTG
GTTGGTGTTGAGGAGGTCGGCGATTTAGAGGGTGTTTCACGAAGCCCTGACCAGGAAGCTGCAGAGGCTTTTGCTGCTTC
TGCATCTAACGAGGCCCGCTCAACTACAAACCATTATATCAACCGCAACAGTAGCATGAAGAATGCTCCTGGTGGTAGAG
GCAATCTTAGGTCTCCTCGATGGTCTGAAGTAATCTCCGCTAAGGAAACCAATTCAACAACACATGAAGAAGTGAAGACA
TTCATGTCCCAGTTGTCTTCTGCGCGAGGCCTCGATGGTCCTTGGAGTGAGGTGGCTGCTAGCCCCAGAATCAGCATACA
GATTGATGAGTACAGTCAATCTGATGCCATTGATGGCAGACAGTTCCTTGATCTGGAACCATCTGATG------TTCCAA
CTGAAGCTGAAGGTGAAATCTCCCCTGAGTCCCTGAAGAAGCAATGCGAGCTTAACAAGAAAAAACTAAGCATCCTTTAT
AAGGAGCTCGAGGCAGAACGGAGTGCTTCGTCTGTTGCAGCAAGTGAAGCGATGGCTATGATCAATAGGTTGCAAGTGGA
AAAGGCTGCAATGCACATGGAGGCGCTGCAGTATCTCCGGATGATGGAAGAGCAGGCTGATCATGACCAAGAAGAAATTG
GAAAGCTAAATGACTTGCTTACAGAAAGGGAGAAAGAAATGCTTGACCTGGAAGCTGAACTCGAAAGTTATGAGAGCAAG
TTCCGCATCGAACCATTTGATCTCGGGAATTTTGACGCTGTTGATGGAGATATGGCACTCAGTGTCTTGGATAGCTCAGA
TTTTGTGAGGAATACCATCTTTGGTTTTGAAGATGAGAAGGCCAAAATTTTGGAATCCTTGAGCAGATTAGAGGAAACAC
TTGGCGTGCCTTACACAAATAGATTTGATTTGGGTGGCGCAAGTGACATCCTACAGAGTGGGTCACTGAGAGATCATCCA
AGTGATGGGCCTGGCCAACATGTAGAGAACTCAGAATTGGAATGTGGGAGTTCACTATTGCCTCAGGAGCACATGAACGA
CGAATCACACTTGAACGATGACTCACTGAGAGATCATCCAAGTGATGGACCTGGCCAAGATCTAGAAAACTCAGAATTGG
AATGTCAGAGTTCACTATTGCCTCAGGAACACATGAACGATGAATCACACTTGAAAGATGACTCAATGAGAGATCATCCA
AGTGATGGGCCTGGCCAA--------------------------------------------------------------
----------------------------------------CATGTAGAAAACTCAGAATTGGAGTGTCGGAGTTCACTAT
TGCCTCAGGAAGACTTGAACGATGAATCACTAAGAGATCAGCCAAGTGATGGGCCTGGCCAATACGTACAAAACCCAGAA
CTGGAATGCCGAAGTTCACTGTTGCCGCAGGAAGACCTGAAAGATGAATCCGTCTCATTACAACGAAATGATGAAAATCA
ATCTGTTGAGAACCAAAAATATGTTGGCTCATGTTCGCGCTCAGATGATGATAAAATTAGTTCCGTGGAAAGCATTAAAC
AAGAAATTTCGCTCTTGAATAGTAGACTCATGGCACTTGAAGCAGATCAGAAGTTTCTCAAGCAGATATTGAGTTCTCTT
AAATGTAGTAGTGATGGAGAACAATATGTGCAGGAGATAACTAGTCATTTGAGGGAGCTGCGAAGAATCGTTACCAAGCA
GAGAGATAGGACAGCTCTATGAGCTCAAAATTATTCAGCATTCAGAAGGTAATAATAGGCCATAGTTGTAGCCCATCTGT
TGGCAATGAGTTTGAGAACATGCTGTGGAAAAACAAC--------GTATAGCTTATAGGATGTGTATCAGGATAGGTTGA
TGTTCAGGAGACCTTATGCATTGTATGAGGTCCAGCAAATGTATTGCAAATATCTTTTGAAATTATTAGCCTTAGGTTGA
TTCTTCCATCAAAGCGCCTC-AGTCAATAATCTCACA--GGACACATCTCACCAATTATCAGTGTAGTGTATGAACTTCC
AGGCATTCAGTCACTTGGTGTTATATAATGTGATCCCTAGCATTACTCTACTCTCTTTTCTTGTAACCTACAGCAACAAC
TCGTTGAATCAGCGTGATCATTAGATCTTACACAGTTCCTCCATTGTGTGTCCTTAAGTAACCTCTGACCTTGTGTCATA
TCCAAATGGAACATATAGCACAAGTTACTGTTTTTTGGACT-GGAAAGAAACAA-GTAATTGTTCCAGCAGTGTCGAAAT
AACCGAAGGACTTGGTAGCGTCTCATGATGTTTATTGACATACTATTACATATTACAATGTGGAGATTCTTTTCCAGTCT
CTATTTTCTTTGTCTGTCGACGTGTGTCGATCAGCGACAACACGCGAACTTCATGATGCCTAGTGCCTCCAGTTGGGAAG
TACGGCAGTAATCTCTCTGTGGCCTTGCAAAACCTGGGATACGATGCATGCTTTTGTGTCGCGAC-----GAGGCGACTG
GGGAACAGGAGAAGGGACATGGAATGTGACTAGGCTGGAGGAGAAGTGGAACATCCTTGGAGCAGAAAATAGCACGAGCG
CTTCGAACTTGTTCCCCGGGTTGACAGCCACAGTGGAGCAGTCATGCTTCCACCAGGGCCTCGGATTTCAGTTTGCACTA
CATGTAGGGAAGATCGCCATCCTGGGAGCTGAGGTAATCACCCAGTTGAAGTTCATCTTGTTCCCCTCATCGTCACACCG
CGACAAGGGGGGCAAGCTTCAGACGAGTCGACAG
>chr4D_116
AATAAAGAAAACCATGAGTGGTGA--------------------------------------------------------
--------------------------------------------------------GAAGGACGAAAGCGGAGAATGACG
AGCGAGACGTGGGGGCGCGGGACAGGGAACTTTGCAT-TTTTTGTAAGCTCTTTTTATTTAGTATAGTATACATATACAA
GTTTGCCGTCTTTTCTTGGCCATGGTAAGGTGAGGCTATGCTTAAATCTCTCAGCCTCTCATCACATGCAAAGGTTAGAG
AGAGAAATGCGGGAACAAACGGCGGGCGCGGGCACCCTGCTCTCTCCCT--CCCCTCTCCAATCCTACGGAGAATGGGAG
CGAGCCATTTTTCGTCCTGTTTACAACCAAGAACCAAAACTTCCCCCAAACTTCTTTGGGGATCCTTTCCCCGCATTTCT
GGGCCTCCTGGCCGATTCCGCTATCCGACCCTCTCCCGCATCCGCCCGAGCTGTTGATCTGGA------------CTTGA
TTTGAGATCCGCAGCAGCACCGGTATGTTCCGCTTTCCGATCACAATTTTGTTTGAATCTGCGCGAC------ATGCTGT
GCATATGAGAACCCTGAATGGTAAATCGGTGCGATTTCTTTGCAGGATAGGTTAGATCAGAAAGATCGAGGTTTCTTGCC
ACCAATCTGTATGTGCATTGGCAAGT-GGGGGGAAACCTGTTACTAGGCTGAGAGGATCGTGATTATTGCAGAAATTTGG
CTCATCGGCAAAGCTTCGTTGGGAGAAAAGGTTCCATCTTATGGAACCCTACGTTGGCATGAGTAACCAAGGTTGCAGGA
TTGATGTTTCCTCATTTACAATCTGGTGTGATCTGAGAATATTTGTGCCGCACTAATGGGAGGTTCACAGGACAGGCTGG
GCATTTGAGCAACCTACATGCAAATTATCGGTGCCCTGATCTTTCATGGCTGCGAAAGCTCGTGCGAGGCCGCGATACTC
TTGGCGGCGATTCTGGTTGGTGCTGTGCCATGCCTTGAGCGAGTGCTTCCTCATCGTAATGCTGCTTGTGGTCGCCGTGG
TGTCGTATACCGCGACGAGGTTCGCGCGCATCTGCAGGATCCGGTCACCGTGCATGCTGTGCTCAAGATTGGACAAGGTT
CTGCATGGCAAGGCCTGGTTCTCGGAGGAGCTGGTTTGTGCAGCACACAGGGTGGAAATCGCGCGTTTATCCTATTGCCA
GATTCACAGCAAGCTCGCACATTCTGATGATCTATGTGGAAAGTGCTTGGTTTCATGTTCTGGACCAGTTGGTCAGCCAG
GTAACCCAACAAACATGAGCGTTAAGGAGAAGGCGGGGCACACACAGCGATGTTCTTGTTGTTCAGAGCCATTCACGAAG
AGAGACAACGCGCACAAGTTATTTGAGGAGGTGAATGGCAGGTCTCAGAATGATGGCATGAGCAAAGTGAAGGAGAGAAG
CATGGCCACGGCAAGCGTTGGGCATTCTTCGGATGAGGATTTTGATCAATTGCCTTACGGAGGTTACAGAAAGCTA----
-----CATGACTCTCAATCAGAGATTCATGTCTCAGACGATGATGTTGGCGGCGATGCAAAGCCTTATGAAGCTAAACGT
CGAACCAGAGATCTCGACGAGCGCTCGAAGGCTGTGCCTGGGCAAGTTCGTCAGGAGCTTCCGAAAGAGAAAAGTATGTA
TCGTTTTCCAAAATGCTATAATCCTTATCTAACTCGAACTATTTCTGAGAATGTCAAATTTGTGAGATGTAGCTTTTCTG
GTTGGTATTGAGGAGGTCGGCGATTTAGAGGGTGTTTCACGAAGCCCTGACCAGGAAGCT--------------------
-------AACGGGGCCCGCTCAACTACAAACCATTATGTCAACCGCAACAATAGCATGAAGAATGCTCCTGGTGGTAGAG
GCAATCTTAGATCTCCTCGATGGTCTGAAGTAATCTCCGCTAAGGAAACCAATTCAACAACACATGAAGAAGTGAAGACA
TTCATGTCCCAGTTGTCTTCTGCGCGAGGCCTCGATGGTCCTTGGAGTGAGGTGGCTGCTAGCCCCAGAATCAGCATACA
GATTGATGAGTACAGTCAATCTGATGCCACTGATGGCAGGCAGTTCCTTGATCTGGAACCATCTGATGGCCAAGTTCCAA
CTGAAGCTGAAGGTGAAATCTCCCTTGAGTCCCTGAAGAAGCAATGTGAGCTTAACAAGAAAAAACTAAGTATCCTTTAT
AAAGAGCTCGATGCAGAACGGAGTGCTTCGTCTGTTGCAGCAAGTGAAGCGATGGCTATGATCAATAGGTTGCAAGTGGA
AAAGGCTGCAATGCACATGGAGGCGCTGCAGTATCTCCGGATGATGGAAGAGCAGGCTGATCATGACCAAGAAGAAATTG
GAAAGCTAAATGACTTGCTTACAGAAAGAGAGAAAGAAATGCTTGACCTGGAAGCTGAACTCGAAGGTTATGAGAGCAGG
TTCCGCATCGAACCATTTGAGCTCGGAAAATTTGACGCTATTGATGGAGATATGGCACTCAGAGTCTTGGATAATTCAGA
TTTTGTGAGGAATACCATCTTTGATTTTGAAGATGAGAAGGCCAAAATTTTGGAATCCTTGAGCAGATTAGAGGAAACAC
TTGGCATGCCTTACACAAATAGATTTGATTTGGGTGGCACAAGTGATAGCCTACAGAGTGGGTCACTGAGAGATCATCCA
ACTGATTGGCCAGGCCAAAGTGTAGAAAACTCAGAATTGGAATCTCGGAGTTCACTATTGCCTCAGGAG-----------
-------CACTTGAACGATGACTCGCTGAGAGATCATCCAAGTGATG---------------------------------
--------------------------------------------------------------------------------
-------GGCCTGGCCAA--------------------------------------------------------------
----------------------------------------CATGCAGAAAACTCAGAATTGGAACGTCGGAATTCACTAA
TGCCTCAGGAAGACTTGAACGATGAATCACTGAGAGATCATCCAAGTGATGGGCCTGGCCAATATGTAGAAAACCAAGAA
TCAGAATGCCAAAGTTCACCATTGCCTCAGGAAGACTTGAAAGATGAATCAGTCTCTTTACAACGAAATGATGAAAATCA
ATCTGCTGAGAATCAAAAATATGTTGGCCCATGTTCGCGCTCAGATGACGATAAAATTAGTTCCATGGAAAGCATTAAAC
AAGAAATTTTGCTCTTGAATAGTAGATTCATGGCACTTGAAGCAGATCAGAAGTTTCTCAAGCAGATATTGAGTTCTCTT
AAATGTAGTAGTGATGCAGAACAATATGTGCAGGAGATAACTAGTCATTTGAGGGAGCTCCGAAGAATTGCTACCGAGCA
GAGAGATAGGACAGCTCTATGAGCTCAAAATTATTCAGCATTCAGAAGGTAATAATAGGCCATAGTTGTAGCCCATCTAT
TGGCAATGTGTTTGAGAACATGCTGTGGAAAATCAAAATGTGTTAGTATAGCTTATAGGATGTGTATCAGGATAGGTTGA
TGTTCAGGAGACCTTATGCATTGTATGAGGTTCACCAAATGTACTGCAAATATCTTTTGAAATTATTAGCCTTAGGTTGA
TTCTTCCATCGAAGTGCCTCA-GTCAATAATCTCACAGAGGAGACATCTCACCAATTATCAGTGTAGTGTATGAACTTCC
AGACATTCAGTCACTTGGTGTTATATAATGTGATCCCTAGCATTACTTG-CTCTTTTTTCTTGTAACCTACAGCAACAAC
TCGTTGAATCAGCGTGATCGTTAGATCTTACACAGTTCCTCCATTGTGTATCCTTAAGTAACCTCTGACCTTGTGTCATA
TCCAAATGGAACATATAGCACAAGTTACTGTTTTTTGGACT-GGAAAGAAACAAAGTTGTTGTTCCAGCAGTGTCGAAAT
AACCGAAGGACTTGGTAGCGTGTCATGATGTTTATTGACATA---TTACATATTACAGTGTGGAGATTCTTTTCCAGTCT
CTATTTTCTTTGTCTGTCGACGCGTGTCGATCGGCGACAACACCCGAACTTCATGATGCCCAGTGCCTCCAGTTGGGAAG
TATGGCAGTAATCTCGCTGTGACCTTGCAAAACCTGGGATACGATGCATGCTTTCATGTCACACCGAGGTGAGGTGACTG
GGGAACAGGAGAAGGGACATGGAATGTAACTAGGCTGGAGGAGAAGCGGAACATTCTTCAAGCAGAAAATAGCACGAGCG
CTTCGAACTTATTCCCCGGGTTGACAGCCACAGTGGAGCAGTCATGCTTCCGCCAGGGCCTCGGATTTCAGTTTGCACTA
CATGTAGAGAAGATCGCCATCCTGGGAGCTGAGGTAAT------------------------------------------
----------------------------------
>chr4B_242
TTTGCCCT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------TTTTCATGGCCATGGTAACTTGAGGCTATGCTTAAATCTCTCAAC--CTCACCACATGCAAAGGTTAGAG
AGAGAAATGCGGGAACAAACGGCGGGCGCGGGCACCCTGTTCCCTCTCTCTCCCCTCTCCAATCCTACGGAGAATGGGAG
CGAGCCATTTTCCCTCCTGTTTACAACCAAGAACCAAAACTTCCCCCAAACTTGTTTGGGGATCTTTTCCCCGCATTTCT
GGGCCTCCTGCCAGATTCCGTC--------------------------AGCTGTTGATCTGGAGAATCGCAGCTTCCTGA
TTTGAGATCCGCAGCAGCACAGGTATGTTCCGCTTTCCGATCACATACTTGTTTGAATCTGCGCGAC------ATGCTGT
GCATATGAGAACCCTGAATGGTAAATTGGTGCGATTTCTTTGCAGGATAGATTAGATCAAAAA--TCGAGGGTTCTTGCT
ACCAATCTGCACGTGCATAGGCAAGTGGGGGGGAAACCTGTTACTAGGCTGAGAGCATCGTGATTATTGCAGAAATTTGG
CTCATCGGCGAAGTTCCGTTGAA--------TTCCATCTTATGGAACCCGACGTTGGCATGAGTAACCAATGTTGCAGGA
TTGATGTTTCCTCATTTACAATCTGGTGTGATCTGAGAATATTTGTGCCGCACTAATGGGAGGTTCACAGGACAGGCTGG
GCATTTGAGCAACCTACATGCAAATTACCGGTGCCCTGATCTTTCATGGCTGCGAAAGCTCGTGCGAGGCCGCGATACTC
TTGGCGGCGATTCTGGTTGGTGCTGTGCCATGCCTTGAGCGAGTGCTTCCTCATCGTAATGCTGCTTGTGGTCGCCGTGG
TGTCGTATACCGCGACGAGGTTCGCGCGCATCTGCAGGATCCGCTCACCGTGCATGCTGTGCTCAAGATTGGACAAGGTT
CTGCATGACAAGGCCTGGTTCTCGGAGGAGCTGGTTTGTGCAGCACACAGGGTGGAAATCGCGCGTTTATCGTATTGCCA
GATTCACAGCAAGCTCGCACATTCTGATGATCTATGTGGAAAGTGCTTGCTTTCATGCTCTGGACCAGTTGGTAAACCAG
GTAACCCAACAAACATGAGCATTAAGGAGAAGGCGGGGCACACACAACGATGTTCTTGTTGTTCGGAGCCATTCACGAAG
AGAGACAACGCGCACAAGTTATTTGAGGAGGTGAGTGGCAGGCCTCAGAATGATGGCATGAGCAAAGTGAAGGAGAGAAG
CATGGCCACGGCAAGCGTTGGGCATTCTTCGGATGAGGATTTTGATCAATTGCCTTACGGAGGTTACAGAAAGCTA----
-----CATGACTCTCAATCAGAGATTCATGTCTCAGATGATGATGTTGGCAGCGATGCAAAGCCTTATGAAGCTAAACGT
CGAACCAGAGATCTTGACGAGCACTCGAAGGCTGTGCCTGGGCAAGTTCGTCAGGAGCTTCCGAAACAGAAAAGTATGTA
TCGTTTTCCAAAATGCTATAATCCTTATCTAACTTGAACTATTTCTGAGAATGTCAAATTTGTGAAATGTAGCTTTTCTG
GTTGGTACTGAGGAGGTCGGCGATTTAGAGGGTGTTTCACGAAGCCCTGACCAGGAAGCT------------------TC
TGCATCTAACGGGGCCCGCTCAACTACAAACCATTATGTCAACCGCAACAGTAGCATGAAGAATGCTCCTGGTGGTAGAG
GCAATCTTAGATCTCCTCGATGGTCTGAAGTAATCTCCGCTAAGGAAACCAATTCAACAACACATGAAGAAGTGAAGACA
TTCATGTCCCAGTTGTCTTCTGCACGAGGCCTCGATGGTCCTTGGAGTGAGGTGGCTGCTAGCCCCAGAATCAGCATACA
GATTGATGAGTACAGTCAATCTGATGCCACTGATGGCAGACAATTCCTTGATCTGGAACCATCTGATGGCCATGTTCCAA
CTGAAGCTGAAGGTGAGATCTCCCTTGAGTCCCTGAAGAAGCAATGTGAGCTTAACAAGAAAAAACTAAGCATCCTTTAT
AAAGAGCTCGAGGCAGAACGGAGTGCTTCGTCTGTCGCAGCAAGTGAAGCGATGGCCATGATCAATAGGTTGCAAGTGGA
AAAGGCTGCAATGCACATGGAGGCGCTGCAGTATCTCCGGATGATGGAAGAGCAGGCTGATCATGACCAAGAAGAAATTG
GAAAGCTAAATGACTTGCTTACAGAAAGAGAGAAAGAATTGCTTGACCTGGAAGCTGAACTCGAAAGTTATGAGAGCAGG
TTCCGCATGGAACCATTTGATCTCGGAAAATTTGACGCTATTGATGGAGATATGGCACTCAGAGTCTTGGATAACTCAGA
TTTTGTGAGGAATACCATCTTTGGTTTTGAAGATGAGAAGGCCAAAATTTTGGAATCCTTGAGCAGATTAGAGGAAACAC
TTGGCATGCCTTACACAAATAGATTTGATTTGGGTGGCACAACTGATAGCCTACAGAGTGGGTCACTGAAAGATCATCCA
AGTGATTGGCCTGGCCAAAGTGTAGAAAACTCAGAATTGGCATGTCGGAGTTCACTATTGCCTCAGGAGCACTTGAACGA
GGAACCACACTTGAACGATGACTCACTGAGAGATCATCCAAGTGATG---------------------------------
--------------------------------------------------------------------------------
-------GGCCTGGCCAACATGCAGAAAACTCAGAACTGGAATGTCGGAGTTCACTAATGCCTAAGGAAGACTTGAACAA
TGAATCACTGAGAGATCATCCAAGTGATGGGCCTGGCCAACATGCAGAAAACTCAGAATTGGAATGTCGGAGTTCACTAA
TGCCTCAGGAAGACTTGAACGATGAATCACTGAGAGATCACCCAAGTGATGGGCCTGGCCAATATGTAGAAAACCCAGAA
TCAGAATGCCAAAGTTCACCATTGCCTCAGGAAGACTTGAAAGATGAATCAGTCTCTTTACAACGAAATGATGAAAATCA
ATCTGCTGAGAATCAAAAATATGTTGGCCCATGTTCGCGCTCAGATGACGATAAAATTAGTTCCATGGAAAGCATTAAAC
AAGAAATTTTGCTCTTGAATAGTAGATTCATGGCACTTGAAGCAGATCAGAAGTTTCTCAAGCAGATATTGAGTTCTCTT
AAATGTAGTAGTGATGCAGAACAATATGTGCAGGAGATAACTAGTCATTTGAGGGAGCTCCGAAGAATTGCTACCGAGCA
GAGAGATAGGACAGCTCTATGAGCTCAAAATTGTTCAGCATTCAGAAGGTAATAATAGGCCATAGTTGTAGCCCATCTGT
TGGCAATGAGTTTGAGAACATGCTGTGGAAAAACAAAATATG-TAGTATAGCTTATAGGATGTGTATCAGGATAGGTTGA
TGTTCAGCAGACCTTATGCATTGTATGAGGTCCACCAAATGTACTGCAAATATCTTTTGAAATTATTAGCCTTAGGTTGA
TTCTTCCATCGAAGTGCCTCAAGTCAATAATCTCACACAGGACACATCTCACCAATTACCAGTGTAGTGTATGAACTTCC
AGACATTCAGTCACTTGGTGTTATATAATGTGATCCCTAGCATTACTCTACTCTTTTTCCTTGTAACCTACAGCAACAAC
TTGTTGAATCAGGGTGATCATTAGATCTTACACAGTTCCTCCGTTGTGTATCCTTAAGTAACCTCTGACCTTGTGTCATA
TCCAAATGGAACATATAGCACAAGTTACTGTTTCTTGGACTTGGAAAGAAACAA-GTTATTGTTTCAGCAGTGTCGAAAT
AACCGAAGGACTTGGTGGCGTGTCATGATGTTTATTGACATA---TTACATATTACAATGTGGAGATTCTTTTCCAGTCT
CTATTTTCTTTGTCTGTCGACGTGTGTCGATCGGCGATAACACGCGAACTTCATGATGCCCAGTGCCCCCAGTTGGGAAG
TATGGCAGTAATCTCGCTGTGACCTTGCAAAACCTGGGATACGATGCATGCTTCTGTGTTGCACC-----GAGGTGACTG
GGGAACAGGAGAAGGGACATGGAATGTAACTAGGCTGGAGGAGAAGTGGA--ATTCTACAAGCAGAAAATAGCACGAGCG
CTTCGAACTTATTCCCCGGGTTGACAGCCACAGTGGAGCAGTCATGCTTCCGCCAGGGCCTCGGATTTCAGTTTGCACTA
CATGTAGAGAAGATCGCCATCCTAGGAGCTGAGGTAAT------------------------------------------
----------------------------------
>SNPs
--S-S-S-SS-SSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S-S--
--S------------S-----------------SS--S-----S----S------------S---SSSS--------S--
S----------------------------------------------------S--------------------------
-------------S------------------------------------------------------------------
-------------------------------------S------S------S----------------------------
--------S-------S-------S--S----------------------------------------------------
-----------------------------------S--------------------------S----SSSSSS-------
--S-----------------------------------------------------------------------------
----------------------S-S-------S-----------------------------------------------
------------------------------------------------S--S----------------------------
S--S---------------------------------S--S------------------------------------S--
-----------------S--------S------------------------------------------------S----
----------------S--------S------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S---------S-------------------------------------S--------
---------S----------------------------------------------------------------------
----------------------------------------------S---------------------------------
--------------------------------------------------------S-----------------------
-------------------------------------------------------S--------------------SSSS
SSSSS------------------------------------------------S--------------------------
---------------------------------------SS----S----------------------------------
----S----------------------------S-S--------------------------------------------
------S-----------------------------------------------------SSSSSSSSSSSSSSSSSS--
-----------S-------------------------S------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
------------------------S---------------------S---------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------------------------------------------------S-
--------------------------S--S---------S----------------------S----------S------
--------------------------------------------------------------------------------
-----S--------------------------------S-------S-S-------------------------------
------S-----------SS------S------------------S--------------------------S-------
S---S------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS-------------------------------------------------------------------------
--------------------------------------------S------------------S---------------S
-------------------------------S--------S-----------------------S---S-----------
SSS-------S--------SS-----S---------S-------------S-----S-----------------------
-----S------S---------------S-------------------S---------------S---------------
---------S----------------S-----------------------------------------------------
----------------S------------------------------------------S--------S-S----S----
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------------------S--------S------------------------------------
----------S---S-----------------------------------------------------------------
--S---------------------------------------------------S-------------------------
-------------------------------------------------S------------------------------
---------------------------------------------------------S----------------------
---------------------S--------------------SSS-----------------------------------
--------------------------------S---------------------------S-------------------
--S------------S-----S----------------------------------------SS----------S-----
---------------------------S--------------------------S---SS--------------------
----------S----------------------------------------S----------------------------
-------S------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_88
--------------------------------------------------------------------TGTGTGTGTGTA
TGTGGGCA------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_1918
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TTC
TGCATCTAACGAGGCCC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_1654
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------AGATGATGATGTTGGCGGCT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_3291
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------GAAGTTCACTGTTGCCGCAG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>forward_2939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------AAGTGATGGACCTGGCCAAG---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
>reverse_4395
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CGACTG
GGGAACAGGAGAAG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------
