Multiple sequence alignment - TraesCS4A01G012500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G012500 chr4A 100.000 2798 0 0 1 2798 7161240 7158443 0.000000e+00 5168.0
1 TraesCS4A01G012500 chr4A 100.000 57 0 0 2742 2798 7158570 7158514 3.810000e-19 106.0
2 TraesCS4A01G012500 chr4A 85.556 90 11 2 2073 2162 7158916 7158829 2.970000e-15 93.5
3 TraesCS4A01G012500 chr4A 85.556 90 11 2 2325 2412 7159168 7159079 2.970000e-15 93.5
4 TraesCS4A01G012500 chr4B 88.191 1067 85 15 1272 2312 577010606 577011657 0.000000e+00 1234.0
5 TraesCS4A01G012500 chr4B 85.197 635 59 11 447 1055 577008045 577008670 1.100000e-173 619.0
6 TraesCS4A01G012500 chr4B 89.815 108 11 0 1051 1158 577009017 577009124 3.760000e-29 139.0
7 TraesCS4A01G012500 chr4B 88.750 80 6 3 2332 2408 577011791 577011870 8.250000e-16 95.3
8 TraesCS4A01G012500 chr4D 87.152 1043 92 21 1272 2283 461496608 461497639 0.000000e+00 1146.0
9 TraesCS4A01G012500 chr4D 84.470 1056 107 31 1272 2291 461555552 461556586 0.000000e+00 989.0
10 TraesCS4A01G012500 chr4D 84.046 865 89 25 448 1276 461495452 461496303 0.000000e+00 787.0
11 TraesCS4A01G012500 chr4D 82.966 499 52 15 458 943 461554490 461554968 1.200000e-113 420.0
12 TraesCS4A01G012500 chr4D 83.534 249 39 2 950 1196 461555017 461555265 6.030000e-57 231.0
13 TraesCS4A01G012500 chr4D 83.256 215 21 5 1 205 461553836 461554045 1.710000e-42 183.0
14 TraesCS4A01G012500 chr4D 87.778 90 9 2 2325 2412 461497427 461497516 1.370000e-18 104.0
15 TraesCS4A01G012500 chr3D 93.902 328 17 3 2416 2743 75203461 75203785 2.500000e-135 492.0
16 TraesCS4A01G012500 chr3D 93.598 328 20 1 2416 2743 573155554 573155880 3.240000e-134 488.0
17 TraesCS4A01G012500 chr3D 91.367 139 11 1 254 392 614251084 614251221 3.680000e-44 189.0
18 TraesCS4A01G012500 chr5D 93.598 328 20 1 2416 2743 102022491 102022165 3.240000e-134 488.0
19 TraesCS4A01G012500 chr1B 93.093 333 21 2 2411 2743 497444271 497443941 1.170000e-133 486.0
20 TraesCS4A01G012500 chr2B 93.293 328 21 1 2416 2743 131288587 131288261 1.510000e-132 483.0
21 TraesCS4A01G012500 chr2B 93.293 328 21 1 2416 2743 641357502 641357176 1.510000e-132 483.0
22 TraesCS4A01G012500 chr2B 92.262 336 24 2 2408 2743 107536158 107535825 2.520000e-130 475.0
23 TraesCS4A01G012500 chr2B 93.233 133 9 0 257 389 77863137 77863005 2.200000e-46 196.0
24 TraesCS4A01G012500 chr2B 91.176 136 12 0 263 398 97944880 97944745 4.760000e-43 185.0
25 TraesCS4A01G012500 chr1D 92.988 328 22 1 2416 2743 434156524 434156850 7.010000e-131 477.0
26 TraesCS4A01G012500 chr1D 92.492 333 23 2 2411 2743 320824026 320824356 2.520000e-130 475.0
27 TraesCS4A01G012500 chrUn 93.233 133 9 0 257 389 468101922 468101790 2.200000e-46 196.0
28 TraesCS4A01G012500 chr3B 92.593 135 10 0 255 389 236361940 236362074 7.910000e-46 195.0
29 TraesCS4A01G012500 chr3B 93.798 129 8 0 260 388 796471154 796471026 7.910000e-46 195.0
30 TraesCS4A01G012500 chr3B 89.655 145 14 1 254 398 383716625 383716482 1.710000e-42 183.0
31 TraesCS4A01G012500 chr2D 90.345 145 14 0 254 398 62390556 62390412 1.020000e-44 191.0
32 TraesCS4A01G012500 chr5B 89.189 148 14 1 259 406 707433098 707433243 1.710000e-42 183.0
33 TraesCS4A01G012500 chr7A 93.333 45 3 0 385 429 666538888 666538932 1.800000e-07 67.6
34 TraesCS4A01G012500 chr6B 100.000 28 0 0 408 435 672165613 672165640 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G012500 chr4A 7158443 7161240 2797 True 1365.250 5168 92.778000 1 2798 4 chr4A.!!$R1 2797
1 TraesCS4A01G012500 chr4B 577008045 577011870 3825 False 521.825 1234 87.988250 447 2408 4 chr4B.!!$F1 1961
2 TraesCS4A01G012500 chr4D 461495452 461497639 2187 False 679.000 1146 86.325333 448 2412 3 chr4D.!!$F1 1964
3 TraesCS4A01G012500 chr4D 461553836 461556586 2750 False 455.750 989 83.556500 1 2291 4 chr4D.!!$F2 2290

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
498 917 0.037697 TTATGCCGACACTCAGCGTT 60.038 50.0 0.0 0.0 0.0 4.84 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2266 4557 0.103208 CAGACCAGCGATGGGAGTAC 59.897 60.0 25.79 9.57 0.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
59 62 7.910441 TTTTAGGTAAAAATAGGACAGACGG 57.090 36.000 0.00 0.00 32.05 4.79
60 63 4.482952 AGGTAAAAATAGGACAGACGGG 57.517 45.455 0.00 0.00 0.00 5.28
79 82 2.636830 GGCACACATCACTCTTGCTAT 58.363 47.619 0.00 0.00 33.55 2.97
109 120 0.107945 GCCTTGTCAGCTCCGAATCT 60.108 55.000 0.00 0.00 0.00 2.40
117 128 3.997021 GTCAGCTCCGAATCTTTCTTCAA 59.003 43.478 0.00 0.00 0.00 2.69
122 133 6.536582 CAGCTCCGAATCTTTCTTCAAATCTA 59.463 38.462 0.00 0.00 0.00 1.98
126 137 8.438676 TCCGAATCTTTCTTCAAATCTAATCC 57.561 34.615 0.00 0.00 0.00 3.01
129 140 9.928236 CGAATCTTTCTTCAAATCTAATCCTTC 57.072 33.333 0.00 0.00 0.00 3.46
132 143 9.972106 ATCTTTCTTCAAATCTAATCCTTCTGT 57.028 29.630 0.00 0.00 0.00 3.41
133 144 9.224267 TCTTTCTTCAAATCTAATCCTTCTGTG 57.776 33.333 0.00 0.00 0.00 3.66
134 145 6.992063 TCTTCAAATCTAATCCTTCTGTGC 57.008 37.500 0.00 0.00 0.00 4.57
135 146 6.475504 TCTTCAAATCTAATCCTTCTGTGCA 58.524 36.000 0.00 0.00 0.00 4.57
143 154 0.685097 TCCTTCTGTGCAGTGGTACC 59.315 55.000 4.43 4.43 0.00 3.34
161 172 4.072088 GAAACCGCAGCGTCACCG 62.072 66.667 15.05 0.00 37.07 4.94
174 185 1.781429 CGTCACCGCTCAGATATTTCG 59.219 52.381 0.00 0.00 0.00 3.46
176 187 0.861837 CACCGCTCAGATATTTCGGC 59.138 55.000 0.00 0.00 43.50 5.54
181 192 2.726760 CGCTCAGATATTTCGGCTACAC 59.273 50.000 0.00 0.00 0.00 2.90
182 193 2.726760 GCTCAGATATTTCGGCTACACG 59.273 50.000 0.00 0.00 0.00 4.49
186 197 2.037251 AGATATTTCGGCTACACGGCAT 59.963 45.455 0.00 0.00 38.27 4.40
207 626 7.463544 GGCATAAAACATTATTTTGGAAGCAC 58.536 34.615 0.00 0.00 0.00 4.40
215 634 8.761575 ACATTATTTTGGAAGCACATTTGTAG 57.238 30.769 0.00 0.00 0.00 2.74
239 658 8.819643 AGCATAAATAAATACTCTCTTCGTCC 57.180 34.615 0.00 0.00 0.00 4.79
240 659 7.873505 AGCATAAATAAATACTCTCTTCGTCCC 59.126 37.037 0.00 0.00 0.00 4.46
241 660 7.656137 GCATAAATAAATACTCTCTTCGTCCCA 59.344 37.037 0.00 0.00 0.00 4.37
242 661 9.542462 CATAAATAAATACTCTCTTCGTCCCAA 57.458 33.333 0.00 0.00 0.00 4.12
244 663 8.857694 AAATAAATACTCTCTTCGTCCCAAAA 57.142 30.769 0.00 0.00 0.00 2.44
245 664 9.462606 AAATAAATACTCTCTTCGTCCCAAAAT 57.537 29.630 0.00 0.00 0.00 1.82
248 667 7.845066 AATACTCTCTTCGTCCCAAAATAAC 57.155 36.000 0.00 0.00 0.00 1.89
249 668 5.485209 ACTCTCTTCGTCCCAAAATAACT 57.515 39.130 0.00 0.00 0.00 2.24
250 669 5.238583 ACTCTCTTCGTCCCAAAATAACTG 58.761 41.667 0.00 0.00 0.00 3.16
251 670 5.221661 ACTCTCTTCGTCCCAAAATAACTGT 60.222 40.000 0.00 0.00 0.00 3.55
252 671 5.235516 TCTCTTCGTCCCAAAATAACTGTC 58.764 41.667 0.00 0.00 0.00 3.51
253 672 5.011738 TCTCTTCGTCCCAAAATAACTGTCT 59.988 40.000 0.00 0.00 0.00 3.41
254 673 5.617252 TCTTCGTCCCAAAATAACTGTCTT 58.383 37.500 0.00 0.00 0.00 3.01
255 674 6.761312 TCTTCGTCCCAAAATAACTGTCTTA 58.239 36.000 0.00 0.00 0.00 2.10
256 675 7.218614 TCTTCGTCCCAAAATAACTGTCTTAA 58.781 34.615 0.00 0.00 0.00 1.85
257 676 7.881232 TCTTCGTCCCAAAATAACTGTCTTAAT 59.119 33.333 0.00 0.00 0.00 1.40
258 677 7.989416 TCGTCCCAAAATAACTGTCTTAATT 57.011 32.000 0.00 0.00 0.00 1.40
259 678 9.504708 TTCGTCCCAAAATAACTGTCTTAATTA 57.495 29.630 0.00 0.00 0.00 1.40
260 679 9.158233 TCGTCCCAAAATAACTGTCTTAATTAG 57.842 33.333 0.00 0.00 0.00 1.73
261 680 8.943002 CGTCCCAAAATAACTGTCTTAATTAGT 58.057 33.333 0.00 0.00 0.00 2.24
271 690 7.086230 ACTGTCTTAATTAGTACTCACTCCG 57.914 40.000 0.00 0.00 36.14 4.63
272 691 6.658391 ACTGTCTTAATTAGTACTCACTCCGT 59.342 38.462 0.00 0.00 36.14 4.69
273 692 7.081526 TGTCTTAATTAGTACTCACTCCGTC 57.918 40.000 0.00 0.00 36.14 4.79
274 693 6.883217 TGTCTTAATTAGTACTCACTCCGTCT 59.117 38.462 0.00 0.00 36.14 4.18
275 694 7.065563 TGTCTTAATTAGTACTCACTCCGTCTC 59.934 40.741 0.00 0.00 36.14 3.36
276 695 7.065563 GTCTTAATTAGTACTCACTCCGTCTCA 59.934 40.741 0.00 0.00 36.14 3.27
277 696 7.609146 TCTTAATTAGTACTCACTCCGTCTCAA 59.391 37.037 0.00 0.00 36.14 3.02
278 697 6.585695 AATTAGTACTCACTCCGTCTCAAA 57.414 37.500 0.00 0.00 36.14 2.69
279 698 6.585695 ATTAGTACTCACTCCGTCTCAAAA 57.414 37.500 0.00 0.00 36.14 2.44
280 699 6.585695 TTAGTACTCACTCCGTCTCAAAAT 57.414 37.500 0.00 0.00 36.14 1.82
281 700 5.470047 AGTACTCACTCCGTCTCAAAATT 57.530 39.130 0.00 0.00 0.00 1.82
282 701 6.585695 AGTACTCACTCCGTCTCAAAATTA 57.414 37.500 0.00 0.00 0.00 1.40
283 702 7.171630 AGTACTCACTCCGTCTCAAAATTAT 57.828 36.000 0.00 0.00 0.00 1.28
284 703 7.612677 AGTACTCACTCCGTCTCAAAATTATT 58.387 34.615 0.00 0.00 0.00 1.40
285 704 6.727824 ACTCACTCCGTCTCAAAATTATTG 57.272 37.500 0.00 0.00 0.00 1.90
286 705 5.122396 ACTCACTCCGTCTCAAAATTATTGC 59.878 40.000 0.00 0.00 0.00 3.56
287 706 4.394920 TCACTCCGTCTCAAAATTATTGCC 59.605 41.667 0.00 0.00 0.00 4.52
288 707 4.396166 CACTCCGTCTCAAAATTATTGCCT 59.604 41.667 0.00 0.00 0.00 4.75
289 708 5.010282 ACTCCGTCTCAAAATTATTGCCTT 58.990 37.500 0.00 0.00 0.00 4.35
290 709 6.093495 CACTCCGTCTCAAAATTATTGCCTTA 59.907 38.462 0.00 0.00 0.00 2.69
291 710 6.657541 ACTCCGTCTCAAAATTATTGCCTTAA 59.342 34.615 0.00 0.00 0.00 1.85
292 711 7.175990 ACTCCGTCTCAAAATTATTGCCTTAAA 59.824 33.333 0.00 0.00 0.00 1.52
293 712 8.062065 TCCGTCTCAAAATTATTGCCTTAAAT 57.938 30.769 0.00 0.00 0.00 1.40
294 713 8.527810 TCCGTCTCAAAATTATTGCCTTAAATT 58.472 29.630 0.00 0.00 0.00 1.82
295 714 9.150348 CCGTCTCAAAATTATTGCCTTAAATTT 57.850 29.630 0.00 0.00 35.01 1.82
296 715 9.956797 CGTCTCAAAATTATTGCCTTAAATTTG 57.043 29.630 0.00 8.77 35.05 2.32
308 727 9.905713 ATTGCCTTAAATTTGTCTAGATACTGA 57.094 29.630 0.00 0.00 0.00 3.41
309 728 9.905713 TTGCCTTAAATTTGTCTAGATACTGAT 57.094 29.630 0.00 0.00 0.00 2.90
310 729 9.330063 TGCCTTAAATTTGTCTAGATACTGATG 57.670 33.333 0.00 0.00 0.00 3.07
311 730 9.331282 GCCTTAAATTTGTCTAGATACTGATGT 57.669 33.333 0.00 0.00 0.00 3.06
343 762 7.539712 ACTAAAATGTGACTTGATACATCCG 57.460 36.000 0.00 0.00 36.56 4.18
344 763 7.103641 ACTAAAATGTGACTTGATACATCCGT 58.896 34.615 0.00 0.00 36.56 4.69
345 764 8.255206 ACTAAAATGTGACTTGATACATCCGTA 58.745 33.333 0.00 0.00 36.56 4.02
346 765 9.261180 CTAAAATGTGACTTGATACATCCGTAT 57.739 33.333 0.00 0.00 41.16 3.06
347 766 8.506168 AAAATGTGACTTGATACATCCGTATT 57.494 30.769 0.00 0.00 38.48 1.89
348 767 8.506168 AAATGTGACTTGATACATCCGTATTT 57.494 30.769 0.00 0.00 38.48 1.40
349 768 9.607988 AAATGTGACTTGATACATCCGTATTTA 57.392 29.630 0.00 0.00 38.48 1.40
350 769 8.818141 ATGTGACTTGATACATCCGTATTTAG 57.182 34.615 0.00 0.00 38.48 1.85
351 770 8.002984 TGTGACTTGATACATCCGTATTTAGA 57.997 34.615 0.00 0.00 38.48 2.10
352 771 7.919091 TGTGACTTGATACATCCGTATTTAGAC 59.081 37.037 0.00 0.00 38.48 2.59
353 772 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
354 773 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
355 774 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
356 775 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
379 798 9.869757 AAATTTAAGATAAGAATTTTGGGACGG 57.130 29.630 0.00 0.00 31.00 4.79
380 799 8.817092 ATTTAAGATAAGAATTTTGGGACGGA 57.183 30.769 0.00 0.00 0.00 4.69
381 800 7.859325 TTAAGATAAGAATTTTGGGACGGAG 57.141 36.000 0.00 0.00 0.00 4.63
382 801 5.693769 AGATAAGAATTTTGGGACGGAGA 57.306 39.130 0.00 0.00 0.00 3.71
383 802 5.675538 AGATAAGAATTTTGGGACGGAGAG 58.324 41.667 0.00 0.00 0.00 3.20
384 803 5.425539 AGATAAGAATTTTGGGACGGAGAGA 59.574 40.000 0.00 0.00 0.00 3.10
385 804 3.618690 AGAATTTTGGGACGGAGAGAG 57.381 47.619 0.00 0.00 0.00 3.20
386 805 2.907042 AGAATTTTGGGACGGAGAGAGT 59.093 45.455 0.00 0.00 0.00 3.24
387 806 4.094476 AGAATTTTGGGACGGAGAGAGTA 58.906 43.478 0.00 0.00 0.00 2.59
388 807 3.889520 ATTTTGGGACGGAGAGAGTAC 57.110 47.619 0.00 0.00 0.00 2.73
389 808 2.297698 TTTGGGACGGAGAGAGTACA 57.702 50.000 0.00 0.00 0.00 2.90
390 809 2.297698 TTGGGACGGAGAGAGTACAA 57.702 50.000 0.00 0.00 0.00 2.41
391 810 2.297698 TGGGACGGAGAGAGTACAAA 57.702 50.000 0.00 0.00 0.00 2.83
392 811 2.600790 TGGGACGGAGAGAGTACAAAA 58.399 47.619 0.00 0.00 0.00 2.44
393 812 3.170717 TGGGACGGAGAGAGTACAAAAT 58.829 45.455 0.00 0.00 0.00 1.82
394 813 3.581332 TGGGACGGAGAGAGTACAAAATT 59.419 43.478 0.00 0.00 0.00 1.82
395 814 4.773674 TGGGACGGAGAGAGTACAAAATTA 59.226 41.667 0.00 0.00 0.00 1.40
396 815 5.424252 TGGGACGGAGAGAGTACAAAATTAT 59.576 40.000 0.00 0.00 0.00 1.28
397 816 6.608405 TGGGACGGAGAGAGTACAAAATTATA 59.392 38.462 0.00 0.00 0.00 0.98
398 817 7.124599 TGGGACGGAGAGAGTACAAAATTATAA 59.875 37.037 0.00 0.00 0.00 0.98
399 818 8.148999 GGGACGGAGAGAGTACAAAATTATAAT 58.851 37.037 0.00 0.00 0.00 1.28
425 844 8.485578 AAGGTTAAGACATTTATTTTGGGACA 57.514 30.769 0.00 0.00 0.00 4.02
426 845 8.122472 AGGTTAAGACATTTATTTTGGGACAG 57.878 34.615 0.00 0.00 42.39 3.51
427 846 7.947890 AGGTTAAGACATTTATTTTGGGACAGA 59.052 33.333 0.00 0.00 42.39 3.41
428 847 8.244113 GGTTAAGACATTTATTTTGGGACAGAG 58.756 37.037 0.00 0.00 42.39 3.35
429 848 9.010029 GTTAAGACATTTATTTTGGGACAGAGA 57.990 33.333 0.00 0.00 42.39 3.10
430 849 7.693969 AAGACATTTATTTTGGGACAGAGAG 57.306 36.000 0.00 0.00 42.39 3.20
431 850 7.020827 AGACATTTATTTTGGGACAGAGAGA 57.979 36.000 0.00 0.00 42.39 3.10
432 851 7.108847 AGACATTTATTTTGGGACAGAGAGAG 58.891 38.462 0.00 0.00 42.39 3.20
433 852 6.784031 ACATTTATTTTGGGACAGAGAGAGT 58.216 36.000 0.00 0.00 42.39 3.24
434 853 7.918076 ACATTTATTTTGGGACAGAGAGAGTA 58.082 34.615 0.00 0.00 42.39 2.59
435 854 8.043710 ACATTTATTTTGGGACAGAGAGAGTAG 58.956 37.037 0.00 0.00 42.39 2.57
436 855 3.963428 TTTTGGGACAGAGAGAGTAGC 57.037 47.619 0.00 0.00 42.39 3.58
437 856 2.604912 TTGGGACAGAGAGAGTAGCA 57.395 50.000 0.00 0.00 42.39 3.49
438 857 2.836636 TGGGACAGAGAGAGTAGCAT 57.163 50.000 0.00 0.00 0.00 3.79
439 858 3.953542 TGGGACAGAGAGAGTAGCATA 57.046 47.619 0.00 0.00 0.00 3.14
440 859 4.461450 TGGGACAGAGAGAGTAGCATAT 57.539 45.455 0.00 0.00 0.00 1.78
441 860 4.809193 TGGGACAGAGAGAGTAGCATATT 58.191 43.478 0.00 0.00 0.00 1.28
442 861 5.953571 TGGGACAGAGAGAGTAGCATATTA 58.046 41.667 0.00 0.00 0.00 0.98
443 862 6.007076 TGGGACAGAGAGAGTAGCATATTAG 58.993 44.000 0.00 0.00 0.00 1.73
444 863 6.007703 GGGACAGAGAGAGTAGCATATTAGT 58.992 44.000 0.00 0.00 0.00 2.24
445 864 6.492087 GGGACAGAGAGAGTAGCATATTAGTT 59.508 42.308 0.00 0.00 0.00 2.24
446 865 7.308951 GGGACAGAGAGAGTAGCATATTAGTTC 60.309 44.444 0.00 0.00 0.00 3.01
447 866 7.447238 GGACAGAGAGAGTAGCATATTAGTTCT 59.553 40.741 0.00 0.00 0.00 3.01
448 867 8.760980 ACAGAGAGAGTAGCATATTAGTTCTT 57.239 34.615 0.00 0.00 0.00 2.52
449 868 9.196139 ACAGAGAGAGTAGCATATTAGTTCTTT 57.804 33.333 0.00 0.00 0.00 2.52
469 888 8.437742 GTTCTTTTTATGCATGAACAAATCCAG 58.562 33.333 17.43 5.38 37.52 3.86
482 901 5.806654 ACAAATCCAGCAACTTTGGTTAT 57.193 34.783 0.00 0.00 36.65 1.89
484 903 3.874392 ATCCAGCAACTTTGGTTATGC 57.126 42.857 0.00 0.00 36.65 3.14
492 911 2.423577 ACTTTGGTTATGCCGACACTC 58.576 47.619 0.00 0.00 41.21 3.51
498 917 0.037697 TTATGCCGACACTCAGCGTT 60.038 50.000 0.00 0.00 0.00 4.84
499 918 0.735978 TATGCCGACACTCAGCGTTG 60.736 55.000 0.00 0.00 0.00 4.10
501 920 3.414700 CCGACACTCAGCGTTGGC 61.415 66.667 0.00 0.00 40.37 4.52
502 921 3.767230 CGACACTCAGCGTTGGCG 61.767 66.667 0.00 0.00 46.35 5.69
525 945 5.106555 CGAAAGCTACATGAAGAAACACCAT 60.107 40.000 0.00 0.00 0.00 3.55
537 957 6.878923 TGAAGAAACACCATATCTGTAACCAG 59.121 38.462 0.00 0.00 40.25 4.00
570 1001 9.661563 TTAAGAAATCGGCTATCTGTTTAAAGA 57.338 29.630 0.00 0.00 0.00 2.52
573 1004 9.010029 AGAAATCGGCTATCTGTTTAAAGAAAA 57.990 29.630 0.00 0.00 0.00 2.29
596 1027 8.944212 AAACAATTTAAGTACGCAATGTAGAC 57.056 30.769 0.00 0.00 32.51 2.59
623 1054 8.312564 TCAATTTCAACAGATCATTTATTGGCA 58.687 29.630 0.00 0.00 0.00 4.92
627 1058 8.481974 TTCAACAGATCATTTATTGGCAAATG 57.518 30.769 3.01 3.85 44.00 2.32
646 1077 5.517322 AATGCCAAAATTGCAAACAATGT 57.483 30.435 1.71 0.00 45.90 2.71
654 1085 8.649841 CCAAAATTGCAAACAATGTCTACATAG 58.350 33.333 1.71 0.00 45.90 2.23
676 1107 4.466370 AGGACCATGTTAGAAACGAGATCA 59.534 41.667 0.00 0.00 0.00 2.92
715 1146 2.899256 ACCCATAAATGCTGTGTTTGCT 59.101 40.909 0.00 0.00 0.00 3.91
749 1180 4.724303 TCGTTGACGAAACAAAAACATGT 58.276 34.783 3.41 0.00 46.30 3.21
750 1181 4.789119 TCGTTGACGAAACAAAAACATGTC 59.211 37.500 0.00 0.00 46.30 3.06
751 1182 4.555360 CGTTGACGAAACAAAAACATGTCA 59.445 37.500 0.00 0.00 43.02 3.58
752 1183 5.496345 CGTTGACGAAACAAAAACATGTCAC 60.496 40.000 0.00 0.00 43.02 3.67
753 1184 5.048153 TGACGAAACAAAAACATGTCACA 57.952 34.783 0.00 0.00 31.81 3.58
754 1185 5.645624 TGACGAAACAAAAACATGTCACAT 58.354 33.333 0.00 0.00 31.81 3.21
773 1204 3.327757 ACATGTGGTGACAGGATAACACT 59.672 43.478 0.00 0.00 44.46 3.55
795 1226 6.036083 CACTAATTAGGATCGAGTGGTGTTTG 59.964 42.308 16.73 0.00 35.05 2.93
897 1328 9.448438 CTTATGCATACCATGGTTAGCTATTTA 57.552 33.333 29.79 16.97 35.34 1.40
902 1333 9.226606 GCATACCATGGTTAGCTATTTATGTAA 57.773 33.333 25.38 0.00 0.00 2.41
951 1444 8.718158 ATTCAGAACCATGATATCTGACTCTA 57.282 34.615 18.61 9.35 46.70 2.43
960 1453 7.975058 CCATGATATCTGACTCTAGCTATTGTG 59.025 40.741 3.98 0.00 0.00 3.33
992 1485 5.796424 AACGACAGAGGGTAGAGTAAAAA 57.204 39.130 0.00 0.00 0.00 1.94
1020 1514 1.252215 TGTCGGCGAGGTTGGTCATA 61.252 55.000 11.20 0.00 0.00 2.15
1049 1543 0.598158 GGTGTTCAGTTGTCGGCGTA 60.598 55.000 6.85 0.00 0.00 4.42
1134 1980 3.394836 GGGAGTCCGCTCTTGGCT 61.395 66.667 2.26 0.00 41.38 4.75
1158 2004 1.856873 TGGAGGGCCAGATTGGGTT 60.857 57.895 6.18 0.00 39.92 4.11
1184 3111 1.104630 GACTTACTACCTCGGCTGCT 58.895 55.000 0.00 0.00 0.00 4.24
1206 3133 1.600636 CATGTGACGGTGGTGCCTT 60.601 57.895 0.00 0.00 34.25 4.35
1233 3160 2.931105 TTGCGGGAAGGTAGCCCA 60.931 61.111 0.00 0.00 46.36 5.36
1308 3544 1.944024 CCAGTGTTGTCGGTGCTTTTA 59.056 47.619 0.00 0.00 0.00 1.52
1354 3596 0.957888 GGAGTCCTTGTTCCAGCAGC 60.958 60.000 0.41 0.00 33.55 5.25
1455 3698 1.462731 GGCAATGCTTGTGGGTGTCA 61.463 55.000 4.82 0.00 0.00 3.58
1524 3778 0.251077 CCCAGTCCTTCTTTGCAGCT 60.251 55.000 0.00 0.00 0.00 4.24
1528 3782 1.423161 AGTCCTTCTTTGCAGCTTCCT 59.577 47.619 0.00 0.00 0.00 3.36
1620 3883 1.625315 CATCTTCGGGCATGGATCCTA 59.375 52.381 14.23 0.00 0.00 2.94
1623 3886 2.158813 TCTTCGGGCATGGATCCTAAAC 60.159 50.000 14.23 0.87 0.00 2.01
1679 3944 6.480981 TCTTGTTGGTCTCCTACTTTAAAACG 59.519 38.462 2.66 0.00 30.94 3.60
1690 3955 8.130307 TCCTACTTTAAAACGTAACAGTTGTC 57.870 34.615 0.00 0.00 34.14 3.18
1692 3957 8.553696 CCTACTTTAAAACGTAACAGTTGTCAT 58.446 33.333 0.00 0.00 34.14 3.06
1699 3964 4.365723 ACGTAACAGTTGTCATCGTTCTT 58.634 39.130 0.00 0.00 0.00 2.52
1755 4020 1.153568 CTCAAATCGAGAGGGCGCA 60.154 57.895 10.83 0.00 45.45 6.09
1757 4022 1.448540 CAAATCGAGAGGGCGCAGT 60.449 57.895 10.83 0.00 0.00 4.40
1818 4087 2.971901 AGTTTAGTGGTTCCCAAGGG 57.028 50.000 0.00 0.00 34.18 3.95
1819 4088 1.427753 AGTTTAGTGGTTCCCAAGGGG 59.572 52.381 5.08 0.00 46.11 4.79
1843 4112 2.993899 CGCATTTGTCGTTCCTAGTCTT 59.006 45.455 0.00 0.00 0.00 3.01
1850 4119 3.640029 TGTCGTTCCTAGTCTTTGGTCTT 59.360 43.478 0.00 0.00 0.00 3.01
1852 4121 3.640029 TCGTTCCTAGTCTTTGGTCTTGT 59.360 43.478 0.00 0.00 0.00 3.16
1860 4129 6.867293 CCTAGTCTTTGGTCTTGTGTACTTAC 59.133 42.308 0.00 0.00 0.00 2.34
1880 4149 3.897239 ACTGTTGGGTGTGAATTCTCAA 58.103 40.909 11.57 3.86 31.88 3.02
1882 4151 3.885297 CTGTTGGGTGTGAATTCTCAAGT 59.115 43.478 11.57 0.00 31.88 3.16
1883 4152 4.277476 TGTTGGGTGTGAATTCTCAAGTT 58.723 39.130 11.57 0.00 31.88 2.66
1884 4153 4.709397 TGTTGGGTGTGAATTCTCAAGTTT 59.291 37.500 11.57 0.00 31.88 2.66
1885 4154 5.186797 TGTTGGGTGTGAATTCTCAAGTTTT 59.813 36.000 11.57 0.00 31.88 2.43
1922 4191 0.110644 GAGTTTGTGGCTTCTTCGCG 60.111 55.000 0.00 0.00 0.00 5.87
1989 4258 8.868522 AAGAATTTTCTCATCACCTTGTATCA 57.131 30.769 0.00 0.00 36.28 2.15
2001 4270 1.920574 CTTGTATCAGCTCGGACGTTG 59.079 52.381 0.00 0.00 0.00 4.10
2002 4271 0.457853 TGTATCAGCTCGGACGTTGC 60.458 55.000 0.00 0.00 0.00 4.17
2007 4276 4.789075 GCTCGGACGTTGCGGCTA 62.789 66.667 0.00 0.00 34.07 3.93
2010 4279 0.248743 CTCGGACGTTGCGGCTATAA 60.249 55.000 0.00 0.00 34.07 0.98
2011 4280 0.248743 TCGGACGTTGCGGCTATAAG 60.249 55.000 0.00 0.00 34.07 1.73
2119 4403 4.449068 GCGAGAGTGAACAAAGAATGAGAA 59.551 41.667 0.00 0.00 0.00 2.87
2128 4412 8.734030 GTGAACAAAGAATGAGAAAAAGTAACG 58.266 33.333 0.00 0.00 0.00 3.18
2131 4415 5.959618 AAGAATGAGAAAAAGTAACGGGG 57.040 39.130 0.00 0.00 0.00 5.73
2163 4448 6.590292 AGACCTCAAATAACAGATTGTGTACG 59.410 38.462 0.00 0.00 39.03 3.67
2168 4455 9.302345 CTCAAATAACAGATTGTGTACGATACT 57.698 33.333 0.00 0.00 39.03 2.12
2198 4485 1.341285 TGCCAGCTTTAGCCACATGAT 60.341 47.619 0.00 0.00 43.38 2.45
2203 4490 5.452356 GCCAGCTTTAGCCACATGATTTAAT 60.452 40.000 0.00 0.00 43.38 1.40
2206 4493 7.864379 CCAGCTTTAGCCACATGATTTAATAAG 59.136 37.037 0.00 0.00 43.38 1.73
2208 4495 9.189156 AGCTTTAGCCACATGATTTAATAAGAA 57.811 29.630 0.00 0.00 43.38 2.52
2209 4496 9.801873 GCTTTAGCCACATGATTTAATAAGAAA 57.198 29.630 0.00 0.00 34.31 2.52
2254 4545 6.318900 GTCTAAAGCTAGGCACACCATTAATT 59.681 38.462 0.00 0.00 39.06 1.40
2266 4557 5.700373 CACACCATTAATTTGGGAAAAGGTG 59.300 40.000 12.02 12.02 46.95 4.00
2283 4575 0.179108 GTGTACTCCCATCGCTGGTC 60.179 60.000 4.31 0.00 41.37 4.02
2315 4618 3.860125 ACGCGCACACACACACAC 61.860 61.111 5.73 0.00 0.00 3.82
2317 4620 2.482831 GCGCACACACACACACAA 59.517 55.556 0.30 0.00 0.00 3.33
2318 4621 1.063972 GCGCACACACACACACAAT 59.936 52.632 0.30 0.00 0.00 2.71
2319 4622 0.525242 GCGCACACACACACACAATT 60.525 50.000 0.30 0.00 0.00 2.32
2320 4623 1.268285 GCGCACACACACACACAATTA 60.268 47.619 0.30 0.00 0.00 1.40
2323 4626 3.105203 GCACACACACACACAATTACAC 58.895 45.455 0.00 0.00 0.00 2.90
2333 4636 7.167302 CACACACACAATTACACAATTTAGGTG 59.833 37.037 0.00 0.00 41.95 4.00
2348 4753 6.808008 ATTTAGGTGTGTGTGAAGATGAAG 57.192 37.500 0.00 0.00 0.00 3.02
2356 4761 2.291465 GTGTGAAGATGAAGCAAGCACA 59.709 45.455 0.00 0.00 32.98 4.57
2359 4764 3.979495 GTGAAGATGAAGCAAGCACAAAG 59.021 43.478 0.00 0.00 0.00 2.77
2365 4770 6.285990 AGATGAAGCAAGCACAAAGAAAAAT 58.714 32.000 0.00 0.00 0.00 1.82
2366 4771 7.436118 AGATGAAGCAAGCACAAAGAAAAATA 58.564 30.769 0.00 0.00 0.00 1.40
2371 4776 7.042797 AGCAAGCACAAAGAAAAATAGAGAA 57.957 32.000 0.00 0.00 0.00 2.87
2373 4778 7.650903 AGCAAGCACAAAGAAAAATAGAGAAAG 59.349 33.333 0.00 0.00 0.00 2.62
2374 4779 7.436376 GCAAGCACAAAGAAAAATAGAGAAAGT 59.564 33.333 0.00 0.00 0.00 2.66
2377 4782 9.952188 AGCACAAAGAAAAATAGAGAAAGTAAC 57.048 29.630 0.00 0.00 0.00 2.50
2409 4817 8.954950 ATCTAGACCTCAAATAACAGATTGTG 57.045 34.615 0.00 0.00 0.00 3.33
2410 4818 7.907389 TCTAGACCTCAAATAACAGATTGTGT 58.093 34.615 0.00 0.00 43.24 3.72
2411 4819 9.031537 TCTAGACCTCAAATAACAGATTGTGTA 57.968 33.333 0.00 0.00 39.03 2.90
2412 4820 9.823647 CTAGACCTCAAATAACAGATTGTGTAT 57.176 33.333 0.00 0.00 39.03 2.29
2414 4822 9.823647 AGACCTCAAATAACAGATTGTGTATAG 57.176 33.333 0.00 0.00 39.03 1.31
2415 4823 8.964476 ACCTCAAATAACAGATTGTGTATAGG 57.036 34.615 0.00 0.00 39.03 2.57
2416 4824 7.993183 ACCTCAAATAACAGATTGTGTATAGGG 59.007 37.037 0.00 0.00 39.03 3.53
2417 4825 7.445402 CCTCAAATAACAGATTGTGTATAGGGG 59.555 40.741 0.00 0.00 39.03 4.79
2418 4826 6.770785 TCAAATAACAGATTGTGTATAGGGGC 59.229 38.462 0.00 0.00 39.03 5.80
2419 4827 6.515512 AATAACAGATTGTGTATAGGGGCT 57.484 37.500 0.00 0.00 39.03 5.19
2420 4828 3.845781 ACAGATTGTGTATAGGGGCTG 57.154 47.619 0.00 0.00 37.75 4.85
2421 4829 2.158755 ACAGATTGTGTATAGGGGCTGC 60.159 50.000 0.00 0.00 37.75 5.25
2422 4830 2.126882 AGATTGTGTATAGGGGCTGCA 58.873 47.619 0.50 0.00 0.00 4.41
2423 4831 2.509548 AGATTGTGTATAGGGGCTGCAA 59.490 45.455 0.50 0.00 0.00 4.08
2424 4832 2.418368 TTGTGTATAGGGGCTGCAAG 57.582 50.000 0.50 0.00 0.00 4.01
2425 4833 1.578897 TGTGTATAGGGGCTGCAAGA 58.421 50.000 0.50 0.00 34.07 3.02
2426 4834 1.912731 TGTGTATAGGGGCTGCAAGAA 59.087 47.619 0.50 0.00 34.07 2.52
2427 4835 2.307392 TGTGTATAGGGGCTGCAAGAAA 59.693 45.455 0.50 0.00 34.07 2.52
2428 4836 3.245087 TGTGTATAGGGGCTGCAAGAAAA 60.245 43.478 0.50 0.00 34.07 2.29
2429 4837 3.378427 GTGTATAGGGGCTGCAAGAAAAG 59.622 47.826 0.50 0.00 34.07 2.27
2430 4838 1.478631 ATAGGGGCTGCAAGAAAAGC 58.521 50.000 0.50 0.00 38.76 3.51
2431 4839 0.405585 TAGGGGCTGCAAGAAAAGCT 59.594 50.000 0.50 0.00 39.46 3.74
2432 4840 0.897401 AGGGGCTGCAAGAAAAGCTC 60.897 55.000 0.50 0.00 39.30 4.09
2433 4841 1.211190 GGGCTGCAAGAAAAGCTCG 59.789 57.895 0.50 0.00 39.46 5.03
2434 4842 1.237285 GGGCTGCAAGAAAAGCTCGA 61.237 55.000 0.50 0.00 39.46 4.04
2435 4843 0.167689 GGCTGCAAGAAAAGCTCGAG 59.832 55.000 8.45 8.45 39.46 4.04
2436 4844 0.167689 GCTGCAAGAAAAGCTCGAGG 59.832 55.000 15.58 0.00 36.47 4.63
2437 4845 0.167689 CTGCAAGAAAAGCTCGAGGC 59.832 55.000 15.58 6.83 37.39 4.70
2439 4847 4.064266 CTGCAAGAAAAGCTCGAGGCTC 62.064 54.545 15.58 3.87 44.86 4.70
2454 4862 3.114650 CTCATGAGCCGCTCGAGA 58.885 61.111 18.75 13.78 32.35 4.04
2455 4863 1.659233 CTCATGAGCCGCTCGAGAT 59.341 57.895 18.75 0.94 32.35 2.75
2456 4864 0.387112 CTCATGAGCCGCTCGAGATC 60.387 60.000 18.75 8.44 32.35 2.75
2457 4865 1.728778 CATGAGCCGCTCGAGATCG 60.729 63.158 18.75 11.22 41.45 3.69
2459 4867 2.051703 GAGCCGCTCGAGATCGAC 60.052 66.667 18.75 3.34 44.22 4.20
2460 4868 2.515057 AGCCGCTCGAGATCGACT 60.515 61.111 18.75 5.99 44.22 4.18
2461 4869 2.051703 GCCGCTCGAGATCGACTC 60.052 66.667 18.75 0.00 44.22 3.36
2479 4887 0.711670 TCGTTTTTCGATTCGGCTCG 59.288 50.000 6.18 5.23 44.01 5.03
2480 4888 0.711670 CGTTTTTCGATTCGGCTCGA 59.288 50.000 6.18 6.21 45.32 4.04
2485 4893 2.702847 TCGATTCGGCTCGAGATCA 58.297 52.632 18.75 0.00 42.38 2.92
2486 4894 1.021968 TCGATTCGGCTCGAGATCAA 58.978 50.000 18.75 4.65 42.38 2.57
2487 4895 1.124462 CGATTCGGCTCGAGATCAAC 58.876 55.000 18.75 0.00 41.12 3.18
2488 4896 1.268794 CGATTCGGCTCGAGATCAACT 60.269 52.381 18.75 0.00 41.12 3.16
2489 4897 2.389998 GATTCGGCTCGAGATCAACTC 58.610 52.381 18.75 1.07 41.79 3.01
2503 4911 5.752712 AGATCAACTCGAAAAGAAACAAGC 58.247 37.500 0.00 0.00 0.00 4.01
2504 4912 5.529060 AGATCAACTCGAAAAGAAACAAGCT 59.471 36.000 0.00 0.00 0.00 3.74
2505 4913 4.908736 TCAACTCGAAAAGAAACAAGCTG 58.091 39.130 0.00 0.00 0.00 4.24
2506 4914 4.634004 TCAACTCGAAAAGAAACAAGCTGA 59.366 37.500 0.00 0.00 0.00 4.26
2507 4915 4.802876 ACTCGAAAAGAAACAAGCTGAG 57.197 40.909 0.00 0.00 0.00 3.35
2508 4916 4.192317 ACTCGAAAAGAAACAAGCTGAGT 58.808 39.130 0.00 0.00 0.00 3.41
2509 4917 4.636206 ACTCGAAAAGAAACAAGCTGAGTT 59.364 37.500 0.00 0.00 30.53 3.01
2510 4918 5.123979 ACTCGAAAAGAAACAAGCTGAGTTT 59.876 36.000 15.15 15.15 41.53 2.66
2511 4919 6.315393 ACTCGAAAAGAAACAAGCTGAGTTTA 59.685 34.615 15.19 1.06 39.15 2.01
2512 4920 7.079182 TCGAAAAGAAACAAGCTGAGTTTAA 57.921 32.000 15.19 0.00 39.15 1.52
2513 4921 7.531716 TCGAAAAGAAACAAGCTGAGTTTAAA 58.468 30.769 15.19 0.00 39.15 1.52
2514 4922 7.483691 TCGAAAAGAAACAAGCTGAGTTTAAAC 59.516 33.333 15.19 10.47 39.15 2.01
2515 4923 7.272515 CGAAAAGAAACAAGCTGAGTTTAAACA 59.727 33.333 20.06 0.00 39.15 2.83
2516 4924 9.087424 GAAAAGAAACAAGCTGAGTTTAAACAT 57.913 29.630 20.06 5.65 39.15 2.71
2517 4925 9.435688 AAAAGAAACAAGCTGAGTTTAAACATT 57.564 25.926 20.06 0.18 39.15 2.71
2518 4926 9.435688 AAAGAAACAAGCTGAGTTTAAACATTT 57.564 25.926 20.06 0.00 39.15 2.32
2519 4927 9.435688 AAGAAACAAGCTGAGTTTAAACATTTT 57.564 25.926 20.06 0.00 39.15 1.82
2526 4934 9.626045 AAGCTGAGTTTAAACATTTTATGTAGC 57.374 29.630 20.06 13.60 44.07 3.58
2527 4935 9.014297 AGCTGAGTTTAAACATTTTATGTAGCT 57.986 29.630 20.06 15.20 44.07 3.32
2528 4936 9.278734 GCTGAGTTTAAACATTTTATGTAGCTC 57.721 33.333 20.06 5.02 44.07 4.09
2529 4937 9.478019 CTGAGTTTAAACATTTTATGTAGCTCG 57.522 33.333 20.06 0.00 44.07 5.03
2530 4938 9.210329 TGAGTTTAAACATTTTATGTAGCTCGA 57.790 29.630 20.06 0.00 44.07 4.04
2531 4939 9.474249 GAGTTTAAACATTTTATGTAGCTCGAC 57.526 33.333 20.06 0.00 44.07 4.20
2532 4940 8.448615 AGTTTAAACATTTTATGTAGCTCGACC 58.551 33.333 20.06 0.00 44.07 4.79
2533 4941 5.464965 AAACATTTTATGTAGCTCGACCG 57.535 39.130 0.00 0.00 44.07 4.79
2534 4942 4.380841 ACATTTTATGTAGCTCGACCGA 57.619 40.909 0.00 0.00 42.78 4.69
2535 4943 4.360563 ACATTTTATGTAGCTCGACCGAG 58.639 43.478 14.45 14.45 42.78 4.63
2536 4944 4.097437 ACATTTTATGTAGCTCGACCGAGA 59.903 41.667 21.91 2.54 42.28 4.04
2537 4945 4.707030 TTTTATGTAGCTCGACCGAGAA 57.293 40.909 21.91 7.14 44.53 2.87
2538 4946 4.707030 TTTATGTAGCTCGACCGAGAAA 57.293 40.909 21.91 9.89 44.53 2.52
2539 4947 2.563471 ATGTAGCTCGACCGAGAAAC 57.437 50.000 21.91 17.25 44.53 2.78
2540 4948 0.167470 TGTAGCTCGACCGAGAAACG 59.833 55.000 21.91 0.00 44.53 3.60
2541 4949 0.445436 GTAGCTCGACCGAGAAACGA 59.555 55.000 21.91 0.00 44.53 3.85
2543 4951 4.059136 CTCGACCGAGAAACGAGC 57.941 61.111 13.64 0.00 44.67 5.03
2544 4952 1.514443 CTCGACCGAGAAACGAGCC 60.514 63.158 13.64 0.00 44.67 4.70
2545 4953 2.874780 CGACCGAGAAACGAGCCG 60.875 66.667 0.00 0.00 45.77 5.52
2546 4954 2.564975 GACCGAGAAACGAGCCGA 59.435 61.111 1.50 0.00 45.77 5.54
2547 4955 1.139095 GACCGAGAAACGAGCCGAT 59.861 57.895 1.50 0.00 45.77 4.18
2548 4956 0.866483 GACCGAGAAACGAGCCGATC 60.866 60.000 1.50 0.58 45.77 3.69
2549 4957 1.313812 ACCGAGAAACGAGCCGATCT 61.314 55.000 1.50 4.89 45.77 2.75
2550 4958 0.179134 CCGAGAAACGAGCCGATCTT 60.179 55.000 1.50 0.00 45.77 2.40
2551 4959 0.917259 CGAGAAACGAGCCGATCTTG 59.083 55.000 1.50 5.25 45.77 3.02
2552 4960 1.467543 CGAGAAACGAGCCGATCTTGA 60.468 52.381 1.50 0.00 45.77 3.02
2553 4961 2.189342 GAGAAACGAGCCGATCTTGAG 58.811 52.381 1.50 0.00 30.28 3.02
2554 4962 1.546476 AGAAACGAGCCGATCTTGAGT 59.454 47.619 1.50 0.00 0.00 3.41
2555 4963 1.921230 GAAACGAGCCGATCTTGAGTC 59.079 52.381 1.50 0.00 0.00 3.36
2556 4964 0.888619 AACGAGCCGATCTTGAGTCA 59.111 50.000 1.50 0.00 0.00 3.41
2557 4965 0.888619 ACGAGCCGATCTTGAGTCAA 59.111 50.000 5.25 5.25 0.00 3.18
2558 4966 1.478510 ACGAGCCGATCTTGAGTCAAT 59.521 47.619 5.91 0.00 0.00 2.57
2559 4967 1.857217 CGAGCCGATCTTGAGTCAATG 59.143 52.381 5.91 1.20 0.00 2.82
2560 4968 2.736719 CGAGCCGATCTTGAGTCAATGT 60.737 50.000 5.91 0.00 0.00 2.71
2561 4969 3.265791 GAGCCGATCTTGAGTCAATGTT 58.734 45.455 5.91 0.00 0.00 2.71
2562 4970 3.005554 AGCCGATCTTGAGTCAATGTTG 58.994 45.455 5.91 2.35 0.00 3.33
2563 4971 2.096496 GCCGATCTTGAGTCAATGTTGG 59.904 50.000 5.91 11.83 0.00 3.77
2564 4972 3.599343 CCGATCTTGAGTCAATGTTGGA 58.401 45.455 5.91 0.00 0.00 3.53
2565 4973 4.194640 CCGATCTTGAGTCAATGTTGGAT 58.805 43.478 5.91 5.18 0.00 3.41
2566 4974 4.272018 CCGATCTTGAGTCAATGTTGGATC 59.728 45.833 16.53 16.53 0.00 3.36
2567 4975 4.026228 CGATCTTGAGTCAATGTTGGATCG 60.026 45.833 26.45 26.45 42.79 3.69
2568 4976 3.002791 TCTTGAGTCAATGTTGGATCGC 58.997 45.455 5.91 0.00 0.00 4.58
2569 4977 2.768253 TGAGTCAATGTTGGATCGCT 57.232 45.000 0.00 0.00 0.00 4.93
2570 4978 2.621338 TGAGTCAATGTTGGATCGCTC 58.379 47.619 0.00 0.00 0.00 5.03
2571 4979 1.590238 GAGTCAATGTTGGATCGCTCG 59.410 52.381 0.00 0.00 0.00 5.03
2572 4980 1.204704 AGTCAATGTTGGATCGCTCGA 59.795 47.619 0.00 0.00 0.00 4.04
2573 4981 2.159043 AGTCAATGTTGGATCGCTCGAT 60.159 45.455 4.26 4.26 37.59 3.59
2574 4982 2.609459 GTCAATGTTGGATCGCTCGATT 59.391 45.455 6.22 0.00 34.60 3.34
2575 4983 3.063997 GTCAATGTTGGATCGCTCGATTT 59.936 43.478 6.22 0.00 34.60 2.17
2576 4984 3.689161 TCAATGTTGGATCGCTCGATTTT 59.311 39.130 6.22 0.00 34.60 1.82
2577 4985 4.873259 TCAATGTTGGATCGCTCGATTTTA 59.127 37.500 6.22 0.00 34.60 1.52
2578 4986 5.006649 TCAATGTTGGATCGCTCGATTTTAG 59.993 40.000 6.22 0.00 34.60 1.85
2579 4987 2.607635 TGTTGGATCGCTCGATTTTAGC 59.392 45.455 6.22 0.00 34.60 3.09
2580 4988 2.866762 GTTGGATCGCTCGATTTTAGCT 59.133 45.455 6.22 0.00 37.85 3.32
2581 4989 2.743938 TGGATCGCTCGATTTTAGCTC 58.256 47.619 6.22 0.00 37.85 4.09
2582 4990 1.716581 GGATCGCTCGATTTTAGCTCG 59.283 52.381 6.22 0.00 37.85 5.03
2583 4991 2.604855 GGATCGCTCGATTTTAGCTCGA 60.605 50.000 6.22 0.00 42.44 4.04
2584 4992 2.776312 TCGCTCGATTTTAGCTCGAT 57.224 45.000 0.00 0.00 43.53 3.59
2585 4993 3.891056 TCGCTCGATTTTAGCTCGATA 57.109 42.857 0.00 0.00 43.53 2.92
2586 4994 3.811514 TCGCTCGATTTTAGCTCGATAG 58.188 45.455 0.00 0.00 43.53 2.08
2587 4995 6.941665 GATCGCTCGATTTTAGCTCGATAGC 61.942 48.000 6.22 0.00 43.53 2.97
2637 5045 9.717994 ATGATCATGCCATATATTAAATGGGAA 57.282 29.630 7.59 0.00 46.31 3.97
2638 5046 9.717994 TGATCATGCCATATATTAAATGGGAAT 57.282 29.630 3.32 0.00 46.31 3.01
2735 5143 9.855021 TTAATTAAGTGCAAAGAAGATTTAGGC 57.145 29.630 0.00 0.00 0.00 3.93
2736 5144 4.790765 AAGTGCAAAGAAGATTTAGGCC 57.209 40.909 0.00 0.00 0.00 5.19
2737 5145 4.039603 AGTGCAAAGAAGATTTAGGCCT 57.960 40.909 11.78 11.78 0.00 5.19
2738 5146 5.179452 AGTGCAAAGAAGATTTAGGCCTA 57.821 39.130 8.91 8.91 0.00 3.93
2739 5147 5.570320 AGTGCAAAGAAGATTTAGGCCTAA 58.430 37.500 21.68 21.68 0.00 2.69
2740 5148 6.190587 AGTGCAAAGAAGATTTAGGCCTAAT 58.809 36.000 25.70 15.37 0.00 1.73
2741 5149 6.665248 AGTGCAAAGAAGATTTAGGCCTAATT 59.335 34.615 25.70 21.47 0.00 1.40
2742 5150 7.834181 AGTGCAAAGAAGATTTAGGCCTAATTA 59.166 33.333 25.70 12.66 0.00 1.40
2743 5151 8.466798 GTGCAAAGAAGATTTAGGCCTAATTAA 58.533 33.333 25.70 11.89 0.00 1.40
2744 5152 9.200817 TGCAAAGAAGATTTAGGCCTAATTAAT 57.799 29.630 25.70 16.26 0.00 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 43 2.941064 GCCCGTCTGTCCTATTTTTACC 59.059 50.000 0.00 0.00 0.00 2.85
47 50 0.902984 TGTGTGCCCGTCTGTCCTAT 60.903 55.000 0.00 0.00 0.00 2.57
48 51 0.902984 ATGTGTGCCCGTCTGTCCTA 60.903 55.000 0.00 0.00 0.00 2.94
53 56 1.004560 AGTGATGTGTGCCCGTCTG 60.005 57.895 0.00 0.00 0.00 3.51
58 61 0.607489 AGCAAGAGTGATGTGTGCCC 60.607 55.000 0.00 0.00 35.80 5.36
59 62 2.099141 TAGCAAGAGTGATGTGTGCC 57.901 50.000 0.00 0.00 35.80 5.01
60 63 3.264947 TCATAGCAAGAGTGATGTGTGC 58.735 45.455 0.00 0.00 34.25 4.57
79 82 2.507484 CTGACAAGGCTCCAAACATCA 58.493 47.619 0.00 0.00 0.00 3.07
109 120 7.448161 TGCACAGAAGGATTAGATTTGAAGAAA 59.552 33.333 0.00 0.00 0.00 2.52
117 128 4.018960 ACCACTGCACAGAAGGATTAGATT 60.019 41.667 16.78 0.00 33.58 2.40
122 133 2.290323 GGTACCACTGCACAGAAGGATT 60.290 50.000 7.15 2.98 33.58 3.01
126 137 0.317160 TCGGTACCACTGCACAGAAG 59.683 55.000 13.54 0.00 0.00 2.85
129 140 0.865769 GTTTCGGTACCACTGCACAG 59.134 55.000 13.54 0.00 0.00 3.66
130 141 0.533308 GGTTTCGGTACCACTGCACA 60.533 55.000 13.54 0.00 38.12 4.57
131 142 1.562575 CGGTTTCGGTACCACTGCAC 61.563 60.000 13.54 0.50 38.12 4.57
132 143 1.301087 CGGTTTCGGTACCACTGCA 60.301 57.895 13.54 0.00 38.12 4.41
133 144 2.674084 GCGGTTTCGGTACCACTGC 61.674 63.158 16.43 16.43 38.12 4.40
134 145 1.289109 CTGCGGTTTCGGTACCACTG 61.289 60.000 13.54 8.97 38.12 3.66
135 146 1.005394 CTGCGGTTTCGGTACCACT 60.005 57.895 13.54 0.00 38.12 4.00
143 154 4.072088 GGTGACGCTGCGGTTTCG 62.072 66.667 26.95 0.00 39.81 3.46
161 172 2.726760 CGTGTAGCCGAAATATCTGAGC 59.273 50.000 0.00 0.00 0.00 4.26
165 176 1.411246 TGCCGTGTAGCCGAAATATCT 59.589 47.619 0.00 0.00 0.00 1.98
173 184 1.080298 TGTTTTATGCCGTGTAGCCG 58.920 50.000 0.00 0.00 0.00 5.52
174 185 3.775661 AATGTTTTATGCCGTGTAGCC 57.224 42.857 0.00 0.00 0.00 3.93
176 187 7.971168 TCCAAAATAATGTTTTATGCCGTGTAG 59.029 33.333 0.00 0.00 0.00 2.74
181 192 6.312426 TGCTTCCAAAATAATGTTTTATGCCG 59.688 34.615 0.00 0.00 0.00 5.69
182 193 7.118971 TGTGCTTCCAAAATAATGTTTTATGCC 59.881 33.333 0.00 0.00 0.00 4.40
215 634 7.656137 TGGGACGAAGAGAGTATTTATTTATGC 59.344 37.037 0.00 0.00 0.00 3.14
228 647 5.238583 ACAGTTATTTTGGGACGAAGAGAG 58.761 41.667 0.00 0.00 0.00 3.20
229 648 5.011738 AGACAGTTATTTTGGGACGAAGAGA 59.988 40.000 0.00 0.00 0.00 3.10
230 649 5.238583 AGACAGTTATTTTGGGACGAAGAG 58.761 41.667 0.00 0.00 0.00 2.85
232 651 5.941948 AAGACAGTTATTTTGGGACGAAG 57.058 39.130 0.00 0.00 0.00 3.79
235 654 8.943002 ACTAATTAAGACAGTTATTTTGGGACG 58.057 33.333 0.00 0.00 0.00 4.79
245 664 8.671921 CGGAGTGAGTACTAATTAAGACAGTTA 58.328 37.037 0.00 0.00 37.25 2.24
246 665 7.176340 ACGGAGTGAGTACTAATTAAGACAGTT 59.824 37.037 0.00 0.00 42.51 3.16
247 666 6.658391 ACGGAGTGAGTACTAATTAAGACAGT 59.342 38.462 0.00 0.00 42.51 3.55
248 667 7.086230 ACGGAGTGAGTACTAATTAAGACAG 57.914 40.000 0.00 0.00 42.51 3.51
267 686 5.567138 AAGGCAATAATTTTGAGACGGAG 57.433 39.130 5.03 0.00 0.00 4.63
268 687 7.455641 TTTAAGGCAATAATTTTGAGACGGA 57.544 32.000 5.03 0.00 0.00 4.69
269 688 8.702163 AATTTAAGGCAATAATTTTGAGACGG 57.298 30.769 5.03 0.00 0.00 4.79
270 689 9.956797 CAAATTTAAGGCAATAATTTTGAGACG 57.043 29.630 16.83 0.00 37.83 4.18
282 701 9.905713 TCAGTATCTAGACAAATTTAAGGCAAT 57.094 29.630 0.00 0.00 0.00 3.56
283 702 9.905713 ATCAGTATCTAGACAAATTTAAGGCAA 57.094 29.630 0.00 0.00 0.00 4.52
284 703 9.330063 CATCAGTATCTAGACAAATTTAAGGCA 57.670 33.333 0.00 0.00 0.00 4.75
285 704 9.331282 ACATCAGTATCTAGACAAATTTAAGGC 57.669 33.333 0.00 0.00 0.00 4.35
317 736 9.261180 CGGATGTATCAAGTCACATTTTAGTAT 57.739 33.333 0.00 0.00 35.55 2.12
318 737 8.255206 ACGGATGTATCAAGTCACATTTTAGTA 58.745 33.333 0.00 0.00 35.55 1.82
319 738 7.103641 ACGGATGTATCAAGTCACATTTTAGT 58.896 34.615 0.00 0.00 35.55 2.24
320 739 7.539712 ACGGATGTATCAAGTCACATTTTAG 57.460 36.000 0.00 0.00 35.55 1.85
321 740 9.607988 AATACGGATGTATCAAGTCACATTTTA 57.392 29.630 0.00 0.00 40.42 1.52
322 741 8.506168 AATACGGATGTATCAAGTCACATTTT 57.494 30.769 0.00 0.00 40.42 1.82
323 742 8.506168 AAATACGGATGTATCAAGTCACATTT 57.494 30.769 0.00 0.00 40.42 2.32
324 743 9.261180 CTAAATACGGATGTATCAAGTCACATT 57.739 33.333 0.00 0.00 40.42 2.71
325 744 8.638873 TCTAAATACGGATGTATCAAGTCACAT 58.361 33.333 0.00 0.00 40.42 3.21
326 745 7.919091 GTCTAAATACGGATGTATCAAGTCACA 59.081 37.037 0.00 0.00 40.42 3.58
327 746 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
328 747 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
329 748 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
330 749 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
353 772 9.869757 CCGTCCCAAAATTCTTATCTTAAATTT 57.130 29.630 0.00 0.00 34.86 1.82
354 773 9.250246 TCCGTCCCAAAATTCTTATCTTAAATT 57.750 29.630 0.00 0.00 0.00 1.82
355 774 8.817092 TCCGTCCCAAAATTCTTATCTTAAAT 57.183 30.769 0.00 0.00 0.00 1.40
356 775 8.104566 TCTCCGTCCCAAAATTCTTATCTTAAA 58.895 33.333 0.00 0.00 0.00 1.52
357 776 7.626390 TCTCCGTCCCAAAATTCTTATCTTAA 58.374 34.615 0.00 0.00 0.00 1.85
358 777 7.125204 TCTCTCCGTCCCAAAATTCTTATCTTA 59.875 37.037 0.00 0.00 0.00 2.10
359 778 6.062258 TCTCCGTCCCAAAATTCTTATCTT 57.938 37.500 0.00 0.00 0.00 2.40
360 779 5.425539 TCTCTCCGTCCCAAAATTCTTATCT 59.574 40.000 0.00 0.00 0.00 1.98
361 780 5.671493 TCTCTCCGTCCCAAAATTCTTATC 58.329 41.667 0.00 0.00 0.00 1.75
362 781 5.189934 ACTCTCTCCGTCCCAAAATTCTTAT 59.810 40.000 0.00 0.00 0.00 1.73
363 782 4.530946 ACTCTCTCCGTCCCAAAATTCTTA 59.469 41.667 0.00 0.00 0.00 2.10
364 783 3.328050 ACTCTCTCCGTCCCAAAATTCTT 59.672 43.478 0.00 0.00 0.00 2.52
365 784 2.907042 ACTCTCTCCGTCCCAAAATTCT 59.093 45.455 0.00 0.00 0.00 2.40
366 785 3.336138 ACTCTCTCCGTCCCAAAATTC 57.664 47.619 0.00 0.00 0.00 2.17
367 786 3.581332 TGTACTCTCTCCGTCCCAAAATT 59.419 43.478 0.00 0.00 0.00 1.82
368 787 3.170717 TGTACTCTCTCCGTCCCAAAAT 58.829 45.455 0.00 0.00 0.00 1.82
369 788 2.600790 TGTACTCTCTCCGTCCCAAAA 58.399 47.619 0.00 0.00 0.00 2.44
370 789 2.297698 TGTACTCTCTCCGTCCCAAA 57.702 50.000 0.00 0.00 0.00 3.28
371 790 2.297698 TTGTACTCTCTCCGTCCCAA 57.702 50.000 0.00 0.00 0.00 4.12
372 791 2.297698 TTTGTACTCTCTCCGTCCCA 57.702 50.000 0.00 0.00 0.00 4.37
373 792 3.889520 ATTTTGTACTCTCTCCGTCCC 57.110 47.619 0.00 0.00 0.00 4.46
399 818 9.589461 TGTCCCAAAATAAATGTCTTAACCTTA 57.411 29.630 0.00 0.00 0.00 2.69
400 819 8.485578 TGTCCCAAAATAAATGTCTTAACCTT 57.514 30.769 0.00 0.00 0.00 3.50
401 820 7.947890 TCTGTCCCAAAATAAATGTCTTAACCT 59.052 33.333 0.00 0.00 0.00 3.50
402 821 8.117813 TCTGTCCCAAAATAAATGTCTTAACC 57.882 34.615 0.00 0.00 0.00 2.85
403 822 9.010029 TCTCTGTCCCAAAATAAATGTCTTAAC 57.990 33.333 0.00 0.00 0.00 2.01
404 823 9.231297 CTCTCTGTCCCAAAATAAATGTCTTAA 57.769 33.333 0.00 0.00 0.00 1.85
405 824 8.602424 TCTCTCTGTCCCAAAATAAATGTCTTA 58.398 33.333 0.00 0.00 0.00 2.10
406 825 7.461749 TCTCTCTGTCCCAAAATAAATGTCTT 58.538 34.615 0.00 0.00 0.00 3.01
407 826 7.020827 TCTCTCTGTCCCAAAATAAATGTCT 57.979 36.000 0.00 0.00 0.00 3.41
408 827 6.881602 ACTCTCTCTGTCCCAAAATAAATGTC 59.118 38.462 0.00 0.00 0.00 3.06
409 828 6.784031 ACTCTCTCTGTCCCAAAATAAATGT 58.216 36.000 0.00 0.00 0.00 2.71
410 829 7.011857 GCTACTCTCTCTGTCCCAAAATAAATG 59.988 40.741 0.00 0.00 0.00 2.32
411 830 7.051000 GCTACTCTCTCTGTCCCAAAATAAAT 58.949 38.462 0.00 0.00 0.00 1.40
412 831 6.013725 TGCTACTCTCTCTGTCCCAAAATAAA 60.014 38.462 0.00 0.00 0.00 1.40
413 832 5.483937 TGCTACTCTCTCTGTCCCAAAATAA 59.516 40.000 0.00 0.00 0.00 1.40
414 833 5.023452 TGCTACTCTCTCTGTCCCAAAATA 58.977 41.667 0.00 0.00 0.00 1.40
415 834 3.840666 TGCTACTCTCTCTGTCCCAAAAT 59.159 43.478 0.00 0.00 0.00 1.82
416 835 3.239449 TGCTACTCTCTCTGTCCCAAAA 58.761 45.455 0.00 0.00 0.00 2.44
417 836 2.889512 TGCTACTCTCTCTGTCCCAAA 58.110 47.619 0.00 0.00 0.00 3.28
418 837 2.604912 TGCTACTCTCTCTGTCCCAA 57.395 50.000 0.00 0.00 0.00 4.12
419 838 2.836636 ATGCTACTCTCTCTGTCCCA 57.163 50.000 0.00 0.00 0.00 4.37
420 839 6.007703 ACTAATATGCTACTCTCTCTGTCCC 58.992 44.000 0.00 0.00 0.00 4.46
421 840 7.447238 AGAACTAATATGCTACTCTCTCTGTCC 59.553 40.741 0.00 0.00 0.00 4.02
422 841 8.391075 AGAACTAATATGCTACTCTCTCTGTC 57.609 38.462 0.00 0.00 0.00 3.51
423 842 8.760980 AAGAACTAATATGCTACTCTCTCTGT 57.239 34.615 0.00 0.00 0.00 3.41
441 860 9.638239 GGATTTGTTCATGCATAAAAAGAACTA 57.362 29.630 20.91 14.23 39.33 2.24
442 861 8.149647 TGGATTTGTTCATGCATAAAAAGAACT 58.850 29.630 20.91 7.32 39.33 3.01
443 862 8.309163 TGGATTTGTTCATGCATAAAAAGAAC 57.691 30.769 16.12 16.12 39.11 3.01
444 863 7.118101 GCTGGATTTGTTCATGCATAAAAAGAA 59.882 33.333 0.00 0.00 0.00 2.52
445 864 6.591062 GCTGGATTTGTTCATGCATAAAAAGA 59.409 34.615 0.00 0.00 0.00 2.52
446 865 6.369340 TGCTGGATTTGTTCATGCATAAAAAG 59.631 34.615 0.00 0.00 31.91 2.27
447 866 6.228995 TGCTGGATTTGTTCATGCATAAAAA 58.771 32.000 0.00 0.00 31.91 1.94
448 867 5.791666 TGCTGGATTTGTTCATGCATAAAA 58.208 33.333 0.00 0.00 31.91 1.52
449 868 5.402997 TGCTGGATTTGTTCATGCATAAA 57.597 34.783 0.00 0.00 31.91 1.40
450 869 5.047164 AGTTGCTGGATTTGTTCATGCATAA 60.047 36.000 0.00 0.00 35.20 1.90
451 870 4.463539 AGTTGCTGGATTTGTTCATGCATA 59.536 37.500 0.00 0.00 35.20 3.14
452 871 3.259876 AGTTGCTGGATTTGTTCATGCAT 59.740 39.130 0.00 0.00 35.20 3.96
453 872 2.629137 AGTTGCTGGATTTGTTCATGCA 59.371 40.909 0.00 0.00 34.00 3.96
454 873 3.308438 AGTTGCTGGATTTGTTCATGC 57.692 42.857 0.00 0.00 0.00 4.06
455 874 4.449743 CCAAAGTTGCTGGATTTGTTCATG 59.550 41.667 0.00 0.00 35.85 3.07
469 888 1.268352 TGTCGGCATAACCAAAGTTGC 59.732 47.619 0.00 0.00 39.03 4.17
484 903 3.414700 GCCAACGCTGAGTGTCGG 61.415 66.667 0.00 0.00 0.00 4.79
492 911 1.132640 GTAGCTTTCGCCAACGCTG 59.867 57.895 5.31 0.00 39.84 5.18
498 917 2.760634 TCTTCATGTAGCTTTCGCCA 57.239 45.000 0.00 0.00 36.60 5.69
499 918 3.188460 TGTTTCTTCATGTAGCTTTCGCC 59.812 43.478 0.00 0.00 36.60 5.54
501 920 4.213270 TGGTGTTTCTTCATGTAGCTTTCG 59.787 41.667 0.00 0.00 0.00 3.46
502 921 5.689383 TGGTGTTTCTTCATGTAGCTTTC 57.311 39.130 0.00 0.00 0.00 2.62
509 929 7.336931 GGTTACAGATATGGTGTTTCTTCATGT 59.663 37.037 0.00 0.00 0.00 3.21
537 957 8.831550 ACAGATAGCCGATTTCTTAAAAAGATC 58.168 33.333 0.00 0.00 37.38 2.75
546 966 8.561738 TTCTTTAAACAGATAGCCGATTTCTT 57.438 30.769 0.00 0.00 0.00 2.52
547 967 8.561738 TTTCTTTAAACAGATAGCCGATTTCT 57.438 30.769 0.00 0.00 0.00 2.52
570 1001 9.389570 GTCTACATTGCGTACTTAAATTGTTTT 57.610 29.630 0.00 0.00 0.00 2.43
573 1004 7.601130 TGAGTCTACATTGCGTACTTAAATTGT 59.399 33.333 0.00 0.00 0.00 2.71
582 1013 6.403333 TGAAATTGAGTCTACATTGCGTAC 57.597 37.500 0.00 0.00 0.00 3.67
583 1014 6.425417 TGTTGAAATTGAGTCTACATTGCGTA 59.575 34.615 0.00 0.00 0.00 4.42
585 1016 5.688823 TGTTGAAATTGAGTCTACATTGCG 58.311 37.500 0.00 0.00 0.00 4.85
596 1027 8.814235 GCCAATAAATGATCTGTTGAAATTGAG 58.186 33.333 0.00 0.00 0.00 3.02
623 1054 5.903810 ACATTGTTTGCAATTTTGGCATTT 58.096 29.167 0.00 0.00 42.91 2.32
627 1058 4.816786 AGACATTGTTTGCAATTTTGGC 57.183 36.364 0.00 0.00 42.91 4.52
646 1077 6.604396 TCGTTTCTAACATGGTCCTATGTAGA 59.396 38.462 0.00 7.75 40.24 2.59
654 1085 4.755411 TGATCTCGTTTCTAACATGGTCC 58.245 43.478 0.00 0.00 0.00 4.46
676 1107 0.958822 GTTCCCTGATGTTTGCCGTT 59.041 50.000 0.00 0.00 0.00 4.44
697 1128 4.082625 TGAGGAGCAAACACAGCATTTATG 60.083 41.667 0.00 0.00 0.00 1.90
698 1129 4.081406 TGAGGAGCAAACACAGCATTTAT 58.919 39.130 0.00 0.00 0.00 1.40
702 1133 1.985473 TTGAGGAGCAAACACAGCAT 58.015 45.000 0.00 0.00 32.46 3.79
703 1134 1.610038 CATTGAGGAGCAAACACAGCA 59.390 47.619 0.00 0.00 40.48 4.41
704 1135 1.668047 GCATTGAGGAGCAAACACAGC 60.668 52.381 0.00 0.00 40.48 4.40
705 1136 1.068055 GGCATTGAGGAGCAAACACAG 60.068 52.381 0.00 0.00 40.48 3.66
706 1137 0.961019 GGCATTGAGGAGCAAACACA 59.039 50.000 0.00 0.00 40.48 3.72
707 1138 1.251251 AGGCATTGAGGAGCAAACAC 58.749 50.000 0.00 0.00 40.48 3.32
711 1142 0.036732 ACGAAGGCATTGAGGAGCAA 59.963 50.000 0.00 0.00 41.53 3.91
715 1146 1.808411 GTCAACGAAGGCATTGAGGA 58.192 50.000 0.00 0.00 35.55 3.71
750 1181 3.436704 GTGTTATCCTGTCACCACATGTG 59.563 47.826 19.31 19.31 46.88 3.21
751 1182 3.327757 AGTGTTATCCTGTCACCACATGT 59.672 43.478 0.00 0.00 33.21 3.21
752 1183 3.942829 AGTGTTATCCTGTCACCACATG 58.057 45.455 0.00 0.00 33.21 3.21
753 1184 5.755409 TTAGTGTTATCCTGTCACCACAT 57.245 39.130 0.00 0.00 33.21 3.21
754 1185 5.755409 ATTAGTGTTATCCTGTCACCACA 57.245 39.130 0.00 0.00 33.21 4.17
765 1196 7.595502 CACCACTCGATCCTAATTAGTGTTATC 59.404 40.741 11.50 7.68 36.63 1.75
773 1204 6.045072 ACAAACACCACTCGATCCTAATTA 57.955 37.500 0.00 0.00 0.00 1.40
795 1226 0.314935 TTCCCAACTACGTCCACGAC 59.685 55.000 6.03 0.00 43.02 4.34
930 1362 6.314120 AGCTAGAGTCAGATATCATGGTTCT 58.686 40.000 5.32 9.06 0.00 3.01
946 1426 3.700038 ACTAACGCCACAATAGCTAGAGT 59.300 43.478 0.00 0.00 0.00 3.24
992 1485 1.412710 ACCTCGCCGACATATCACATT 59.587 47.619 0.00 0.00 0.00 2.71
1065 1910 0.248661 CACTATCACCTGAGACGCCG 60.249 60.000 0.00 0.00 0.00 6.46
1079 1924 3.260205 CCAACCTGATATCCCCCACTAT 58.740 50.000 0.00 0.00 0.00 2.12
1158 2004 3.683847 GCCGAGGTAGTAAGTCTCCACTA 60.684 52.174 0.00 0.00 30.14 2.74
1184 3111 1.006688 CACCACCGTCACATGTCGA 60.007 57.895 8.40 1.61 0.00 4.20
1233 3160 4.969196 CAGGCAGCACCACGTCGT 62.969 66.667 0.00 0.00 43.14 4.34
1256 3183 4.885426 CCAAGGATGGGGATCACG 57.115 61.111 0.00 0.00 43.51 4.35
1325 3561 5.014123 TGGAACAAGGACTCCATAACAAGAT 59.986 40.000 0.00 0.00 36.79 2.40
1354 3596 1.481056 AACCCGAGGGAAGGACACTG 61.481 60.000 16.26 0.00 38.96 3.66
1524 3778 2.035237 AACGTTCTGCCACCGAGGAA 62.035 55.000 0.00 0.00 41.22 3.36
1528 3782 2.970324 GCAACGTTCTGCCACCGA 60.970 61.111 0.00 0.00 36.25 4.69
1623 3886 3.748048 TGCCAGAATCGAAGAAACTTCAG 59.252 43.478 11.20 5.16 43.58 3.02
1652 3915 6.742559 TTAAAGTAGGAGACCAACAAGACT 57.257 37.500 0.00 0.00 0.00 3.24
1679 3944 6.089150 GGACTAAGAACGATGACAACTGTTAC 59.911 42.308 0.00 0.00 0.00 2.50
1690 3955 2.853731 AGCGAGGACTAAGAACGATG 57.146 50.000 0.00 0.00 0.00 3.84
1692 3957 2.877168 GGATAGCGAGGACTAAGAACGA 59.123 50.000 0.00 0.00 0.00 3.85
1740 4005 1.448540 CACTGCGCCCTCTCGATTT 60.449 57.895 4.18 0.00 0.00 2.17
1755 4020 3.314331 CCACCCGAGAGTGCCACT 61.314 66.667 0.00 0.00 36.38 4.00
1773 4038 4.688419 CCGCGCACAACCAAGCAG 62.688 66.667 8.75 0.00 0.00 4.24
1818 4087 2.178273 GAACGACAAATGCGCCCC 59.822 61.111 4.18 0.00 0.00 5.80
1819 4088 1.022451 TAGGAACGACAAATGCGCCC 61.022 55.000 4.18 0.00 0.00 6.13
1843 4112 5.120399 CCAACAGTAAGTACACAAGACCAA 58.880 41.667 0.00 0.00 0.00 3.67
1850 4119 3.451540 TCACACCCAACAGTAAGTACACA 59.548 43.478 0.00 0.00 0.00 3.72
1852 4121 4.757019 TTCACACCCAACAGTAAGTACA 57.243 40.909 0.00 0.00 0.00 2.90
1860 4129 3.885297 ACTTGAGAATTCACACCCAACAG 59.115 43.478 8.44 3.59 31.71 3.16
1890 4159 3.260740 CACAAACTCAAAGCCAAGCAAA 58.739 40.909 0.00 0.00 0.00 3.68
1922 4191 3.451141 AAATCGACATCTGAGAGAGGC 57.549 47.619 0.00 0.00 27.13 4.70
2002 4271 2.981977 TTTCGCCCCGCTTATAGCCG 62.982 60.000 0.00 0.00 38.18 5.52
2007 4276 1.134175 CACAATTTTCGCCCCGCTTAT 59.866 47.619 0.00 0.00 0.00 1.73
2010 4279 2.961768 CACAATTTTCGCCCCGCT 59.038 55.556 0.00 0.00 0.00 5.52
2011 4280 2.809174 GCACAATTTTCGCCCCGC 60.809 61.111 0.00 0.00 0.00 6.13
2119 4403 5.723405 AGGTCTAGATTACCCCGTTACTTTT 59.277 40.000 0.00 0.00 37.77 2.27
2128 4412 7.070821 TCTGTTATTTGAGGTCTAGATTACCCC 59.929 40.741 0.00 0.00 37.77 4.95
2203 4490 7.908082 CGTGCCGAAGATTAATTCAATTTCTTA 59.092 33.333 0.00 0.00 0.00 2.10
2206 4493 6.027749 ACGTGCCGAAGATTAATTCAATTTC 58.972 36.000 1.50 0.00 0.00 2.17
2208 4495 5.354234 AGACGTGCCGAAGATTAATTCAATT 59.646 36.000 0.00 0.00 0.00 2.32
2209 4496 4.876107 AGACGTGCCGAAGATTAATTCAAT 59.124 37.500 0.00 0.00 0.00 2.57
2210 4497 4.250464 AGACGTGCCGAAGATTAATTCAA 58.750 39.130 0.00 0.00 0.00 2.69
2212 4499 5.961395 TTAGACGTGCCGAAGATTAATTC 57.039 39.130 0.00 0.00 0.00 2.17
2221 4508 1.135199 CCTAGCTTTAGACGTGCCGAA 60.135 52.381 0.00 0.00 0.00 4.30
2229 4516 2.762535 TGGTGTGCCTAGCTTTAGAC 57.237 50.000 0.00 0.00 35.27 2.59
2230 4521 5.429681 TTAATGGTGTGCCTAGCTTTAGA 57.570 39.130 0.00 0.00 35.27 2.10
2254 4545 2.963599 GGGAGTACACCTTTTCCCAA 57.036 50.000 9.34 0.00 46.96 4.12
2266 4557 0.103208 CAGACCAGCGATGGGAGTAC 59.897 60.000 25.79 9.57 0.00 2.73
2283 4575 4.753131 CGTGCGCGCGTGTTACAG 62.753 66.667 33.47 15.96 0.00 2.74
2306 4609 7.147983 ACCTAAATTGTGTAATTGTGTGTGTGT 60.148 33.333 0.00 0.00 36.65 3.72
2308 4611 7.147983 ACACCTAAATTGTGTAATTGTGTGTGT 60.148 33.333 0.00 0.00 44.73 3.72
2310 4613 7.199766 CACACCTAAATTGTGTAATTGTGTGT 58.800 34.615 17.57 13.13 44.77 3.72
2323 4626 6.558771 TCATCTTCACACACACCTAAATTG 57.441 37.500 0.00 0.00 0.00 2.32
2333 4636 2.291465 TGCTTGCTTCATCTTCACACAC 59.709 45.455 0.00 0.00 0.00 3.82
2348 4753 7.436376 ACTTTCTCTATTTTTCTTTGTGCTTGC 59.564 33.333 0.00 0.00 0.00 4.01
2356 4761 9.557061 AGTCCGTTACTTTCTCTATTTTTCTTT 57.443 29.630 0.00 0.00 33.35 2.52
2365 4770 9.323985 GTCTAGATTAGTCCGTTACTTTCTCTA 57.676 37.037 0.00 0.00 39.80 2.43
2366 4771 7.282901 GGTCTAGATTAGTCCGTTACTTTCTCT 59.717 40.741 0.00 0.00 39.80 3.10
2371 4776 6.421485 TGAGGTCTAGATTAGTCCGTTACTT 58.579 40.000 0.00 0.00 39.80 2.24
2373 4778 6.690194 TTGAGGTCTAGATTAGTCCGTTAC 57.310 41.667 0.00 0.00 38.73 2.50
2374 4779 7.893124 ATTTGAGGTCTAGATTAGTCCGTTA 57.107 36.000 0.00 0.00 38.73 3.18
2376 4781 7.341256 TGTTATTTGAGGTCTAGATTAGTCCGT 59.659 37.037 0.00 0.00 38.73 4.69
2377 4782 7.713750 TGTTATTTGAGGTCTAGATTAGTCCG 58.286 38.462 0.00 0.00 38.73 4.79
2408 4816 3.620488 CTTTTCTTGCAGCCCCTATACA 58.380 45.455 0.00 0.00 0.00 2.29
2409 4817 2.359214 GCTTTTCTTGCAGCCCCTATAC 59.641 50.000 0.00 0.00 0.00 1.47
2410 4818 2.242196 AGCTTTTCTTGCAGCCCCTATA 59.758 45.455 0.00 0.00 36.62 1.31
2411 4819 1.006400 AGCTTTTCTTGCAGCCCCTAT 59.994 47.619 0.00 0.00 36.62 2.57
2412 4820 0.405585 AGCTTTTCTTGCAGCCCCTA 59.594 50.000 0.00 0.00 36.62 3.53
2413 4821 0.897401 GAGCTTTTCTTGCAGCCCCT 60.897 55.000 0.00 0.00 36.62 4.79
2414 4822 1.588597 GAGCTTTTCTTGCAGCCCC 59.411 57.895 0.00 0.00 36.62 5.80
2415 4823 1.211190 CGAGCTTTTCTTGCAGCCC 59.789 57.895 0.00 0.00 36.62 5.19
2416 4824 0.167689 CTCGAGCTTTTCTTGCAGCC 59.832 55.000 0.00 0.00 36.62 4.85
2417 4825 0.167689 CCTCGAGCTTTTCTTGCAGC 59.832 55.000 6.99 0.00 36.16 5.25
2418 4826 0.167689 GCCTCGAGCTTTTCTTGCAG 59.832 55.000 6.99 0.00 38.99 4.41
2419 4827 2.247790 GCCTCGAGCTTTTCTTGCA 58.752 52.632 6.99 0.00 38.99 4.08
2437 4845 0.387112 GATCTCGAGCGGCTCATGAG 60.387 60.000 27.83 24.40 0.00 2.90
2438 4846 1.656998 GATCTCGAGCGGCTCATGA 59.343 57.895 27.83 23.16 0.00 3.07
2439 4847 1.728778 CGATCTCGAGCGGCTCATG 60.729 63.158 27.83 19.15 43.02 3.07
2440 4848 1.894282 TCGATCTCGAGCGGCTCAT 60.894 57.895 27.83 15.04 44.22 2.90
2441 4849 2.513897 TCGATCTCGAGCGGCTCA 60.514 61.111 27.83 14.76 44.22 4.26
2461 4869 3.183490 CGAGCCGAATCGAAAAACG 57.817 52.632 3.36 0.00 45.56 3.60
2468 4876 1.124462 GTTGATCTCGAGCCGAATCG 58.876 55.000 7.81 0.00 44.07 3.34
2469 4877 2.389998 GAGTTGATCTCGAGCCGAATC 58.610 52.381 7.81 6.22 34.74 2.52
2470 4878 2.500509 GAGTTGATCTCGAGCCGAAT 57.499 50.000 7.81 0.89 34.74 3.34
2479 4887 5.848559 GCTTGTTTCTTTTCGAGTTGATCTC 59.151 40.000 0.00 0.00 39.62 2.75
2480 4888 5.529060 AGCTTGTTTCTTTTCGAGTTGATCT 59.471 36.000 0.00 0.00 0.00 2.75
2481 4889 5.622856 CAGCTTGTTTCTTTTCGAGTTGATC 59.377 40.000 0.00 0.00 31.10 2.92
2482 4890 5.296780 TCAGCTTGTTTCTTTTCGAGTTGAT 59.703 36.000 0.00 0.00 32.92 2.57
2483 4891 4.634004 TCAGCTTGTTTCTTTTCGAGTTGA 59.366 37.500 0.00 0.00 34.55 3.18
2484 4892 4.908736 TCAGCTTGTTTCTTTTCGAGTTG 58.091 39.130 0.00 0.00 0.00 3.16
2485 4893 4.636206 ACTCAGCTTGTTTCTTTTCGAGTT 59.364 37.500 0.00 0.00 0.00 3.01
2486 4894 4.192317 ACTCAGCTTGTTTCTTTTCGAGT 58.808 39.130 0.00 0.00 0.00 4.18
2487 4895 4.802876 ACTCAGCTTGTTTCTTTTCGAG 57.197 40.909 0.00 0.00 0.00 4.04
2488 4896 5.560966 AAACTCAGCTTGTTTCTTTTCGA 57.439 34.783 8.35 0.00 32.91 3.71
2489 4897 7.272515 TGTTTAAACTCAGCTTGTTTCTTTTCG 59.727 33.333 18.72 0.00 38.41 3.46
2490 4898 8.460831 TGTTTAAACTCAGCTTGTTTCTTTTC 57.539 30.769 18.72 6.73 38.41 2.29
2491 4899 9.435688 AATGTTTAAACTCAGCTTGTTTCTTTT 57.564 25.926 18.72 4.77 38.41 2.27
2492 4900 9.435688 AAATGTTTAAACTCAGCTTGTTTCTTT 57.564 25.926 18.72 8.29 38.41 2.52
2493 4901 9.435688 AAAATGTTTAAACTCAGCTTGTTTCTT 57.564 25.926 18.72 0.00 38.41 2.52
2497 4905 9.816354 ACATAAAATGTTTAAACTCAGCTTGTT 57.184 25.926 18.72 5.27 41.63 2.83
2500 4908 9.626045 GCTACATAAAATGTTTAAACTCAGCTT 57.374 29.630 18.72 8.02 41.63 3.74
2501 4909 9.014297 AGCTACATAAAATGTTTAAACTCAGCT 57.986 29.630 18.72 13.95 41.63 4.24
2502 4910 9.278734 GAGCTACATAAAATGTTTAAACTCAGC 57.721 33.333 18.72 12.35 41.63 4.26
2503 4911 9.478019 CGAGCTACATAAAATGTTTAAACTCAG 57.522 33.333 18.72 5.26 41.63 3.35
2504 4912 9.210329 TCGAGCTACATAAAATGTTTAAACTCA 57.790 29.630 18.72 0.39 41.63 3.41
2505 4913 9.474249 GTCGAGCTACATAAAATGTTTAAACTC 57.526 33.333 18.72 3.15 41.63 3.01
2506 4914 8.448615 GGTCGAGCTACATAAAATGTTTAAACT 58.551 33.333 18.72 1.71 41.63 2.66
2507 4915 7.424452 CGGTCGAGCTACATAAAATGTTTAAAC 59.576 37.037 13.48 11.54 41.63 2.01
2508 4916 7.331440 TCGGTCGAGCTACATAAAATGTTTAAA 59.669 33.333 13.48 0.00 41.63 1.52
2509 4917 6.812656 TCGGTCGAGCTACATAAAATGTTTAA 59.187 34.615 13.48 0.00 41.63 1.52
2510 4918 6.331845 TCGGTCGAGCTACATAAAATGTTTA 58.668 36.000 13.48 0.00 41.63 2.01
2511 4919 5.172934 TCGGTCGAGCTACATAAAATGTTT 58.827 37.500 13.48 0.00 41.63 2.83
2512 4920 4.751060 TCGGTCGAGCTACATAAAATGTT 58.249 39.130 13.48 0.00 41.63 2.71
2513 4921 4.097437 TCTCGGTCGAGCTACATAAAATGT 59.903 41.667 13.48 0.00 43.01 2.71
2514 4922 4.607955 TCTCGGTCGAGCTACATAAAATG 58.392 43.478 13.48 0.00 41.71 2.32
2515 4923 4.913335 TCTCGGTCGAGCTACATAAAAT 57.087 40.909 13.48 0.00 41.71 1.82
2516 4924 4.707030 TTCTCGGTCGAGCTACATAAAA 57.293 40.909 13.48 0.00 41.71 1.52
2517 4925 4.418392 GTTTCTCGGTCGAGCTACATAAA 58.582 43.478 13.48 6.96 41.71 1.40
2518 4926 3.486375 CGTTTCTCGGTCGAGCTACATAA 60.486 47.826 13.48 1.33 41.71 1.90
2519 4927 2.031314 CGTTTCTCGGTCGAGCTACATA 59.969 50.000 13.48 0.00 41.71 2.29
2520 4928 1.202154 CGTTTCTCGGTCGAGCTACAT 60.202 52.381 13.48 0.00 41.71 2.29
2521 4929 0.167470 CGTTTCTCGGTCGAGCTACA 59.833 55.000 13.48 0.00 41.71 2.74
2522 4930 0.445436 TCGTTTCTCGGTCGAGCTAC 59.555 55.000 13.48 12.97 41.71 3.58
2523 4931 0.725686 CTCGTTTCTCGGTCGAGCTA 59.274 55.000 13.48 0.03 42.94 3.32
2524 4932 1.502640 CTCGTTTCTCGGTCGAGCT 59.497 57.895 13.48 0.00 42.94 4.09
2525 4933 4.059136 CTCGTTTCTCGGTCGAGC 57.941 61.111 14.76 4.06 42.94 5.03
2527 4935 2.564975 GGCTCGTTTCTCGGTCGA 59.435 61.111 0.00 0.00 40.32 4.20
2528 4936 2.594119 ATCGGCTCGTTTCTCGGTCG 62.594 60.000 0.00 0.00 38.45 4.79
2529 4937 0.866483 GATCGGCTCGTTTCTCGGTC 60.866 60.000 0.00 0.00 40.32 4.79
2530 4938 1.139095 GATCGGCTCGTTTCTCGGT 59.861 57.895 0.00 0.00 40.32 4.69
2531 4939 0.179134 AAGATCGGCTCGTTTCTCGG 60.179 55.000 0.00 0.00 40.32 4.63
2532 4940 0.917259 CAAGATCGGCTCGTTTCTCG 59.083 55.000 0.00 0.00 41.41 4.04
2533 4941 2.189342 CTCAAGATCGGCTCGTTTCTC 58.811 52.381 0.00 0.00 0.00 2.87
2534 4942 1.546476 ACTCAAGATCGGCTCGTTTCT 59.454 47.619 0.00 0.00 0.00 2.52
2535 4943 1.921230 GACTCAAGATCGGCTCGTTTC 59.079 52.381 0.00 0.00 0.00 2.78
2536 4944 1.272490 TGACTCAAGATCGGCTCGTTT 59.728 47.619 0.00 0.00 0.00 3.60
2537 4945 0.888619 TGACTCAAGATCGGCTCGTT 59.111 50.000 0.00 0.00 0.00 3.85
2538 4946 0.888619 TTGACTCAAGATCGGCTCGT 59.111 50.000 0.00 0.00 0.00 4.18
2539 4947 1.857217 CATTGACTCAAGATCGGCTCG 59.143 52.381 0.00 0.00 0.00 5.03
2540 4948 2.898705 ACATTGACTCAAGATCGGCTC 58.101 47.619 0.00 0.00 0.00 4.70
2541 4949 3.005554 CAACATTGACTCAAGATCGGCT 58.994 45.455 0.00 0.00 0.00 5.52
2542 4950 2.096496 CCAACATTGACTCAAGATCGGC 59.904 50.000 0.00 0.00 0.00 5.54
2543 4951 3.599343 TCCAACATTGACTCAAGATCGG 58.401 45.455 0.00 0.00 0.00 4.18
2544 4952 4.026228 CGATCCAACATTGACTCAAGATCG 60.026 45.833 18.40 18.40 43.76 3.69
2545 4953 4.260538 GCGATCCAACATTGACTCAAGATC 60.261 45.833 0.00 3.43 0.00 2.75
2546 4954 3.624861 GCGATCCAACATTGACTCAAGAT 59.375 43.478 0.00 0.00 0.00 2.40
2547 4955 3.002791 GCGATCCAACATTGACTCAAGA 58.997 45.455 0.00 0.00 0.00 3.02
2548 4956 3.005554 AGCGATCCAACATTGACTCAAG 58.994 45.455 0.00 0.00 0.00 3.02
2549 4957 3.002791 GAGCGATCCAACATTGACTCAA 58.997 45.455 0.00 0.00 0.00 3.02
2550 4958 2.621338 GAGCGATCCAACATTGACTCA 58.379 47.619 0.00 0.00 0.00 3.41
2551 4959 1.590238 CGAGCGATCCAACATTGACTC 59.410 52.381 0.00 0.00 0.00 3.36
2552 4960 1.204704 TCGAGCGATCCAACATTGACT 59.795 47.619 0.00 0.00 0.00 3.41
2553 4961 1.640428 TCGAGCGATCCAACATTGAC 58.360 50.000 0.00 0.00 0.00 3.18
2554 4962 2.602257 ATCGAGCGATCCAACATTGA 57.398 45.000 0.00 0.00 0.00 2.57
2555 4963 3.680642 AAATCGAGCGATCCAACATTG 57.319 42.857 5.79 0.00 33.08 2.82
2556 4964 4.260784 GCTAAAATCGAGCGATCCAACATT 60.261 41.667 5.79 0.00 33.08 2.71
2557 4965 3.248602 GCTAAAATCGAGCGATCCAACAT 59.751 43.478 5.79 0.00 33.08 2.71
2558 4966 2.607635 GCTAAAATCGAGCGATCCAACA 59.392 45.455 5.79 0.00 33.08 3.33
2559 4967 2.866762 AGCTAAAATCGAGCGATCCAAC 59.133 45.455 5.79 0.00 44.98 3.77
2560 4968 3.123804 GAGCTAAAATCGAGCGATCCAA 58.876 45.455 5.79 0.00 44.98 3.53
2561 4969 2.743938 GAGCTAAAATCGAGCGATCCA 58.256 47.619 5.79 0.00 44.98 3.41
2562 4970 1.716581 CGAGCTAAAATCGAGCGATCC 59.283 52.381 5.79 0.00 44.98 3.36
2563 4971 2.651701 TCGAGCTAAAATCGAGCGATC 58.348 47.619 5.79 0.00 43.79 3.69
2564 4972 2.776312 TCGAGCTAAAATCGAGCGAT 57.224 45.000 0.00 0.00 43.79 4.58
2581 4989 9.670719 ACATAATGATATTATGTCGAGCTATCG 57.329 33.333 17.15 0.00 40.46 2.92
2610 5018 9.717994 TCCCATTTAATATATGGCATGATCATT 57.282 29.630 10.98 6.58 41.02 2.57
2611 5019 9.717994 TTCCCATTTAATATATGGCATGATCAT 57.282 29.630 10.98 1.18 41.02 2.45
2612 5020 9.717994 ATTCCCATTTAATATATGGCATGATCA 57.282 29.630 10.98 0.00 41.02 2.92
2709 5117 9.855021 GCCTAAATCTTCTTTGCACTTAATTAA 57.145 29.630 0.00 0.00 0.00 1.40
2710 5118 8.466798 GGCCTAAATCTTCTTTGCACTTAATTA 58.533 33.333 0.00 0.00 0.00 1.40
2711 5119 7.179160 AGGCCTAAATCTTCTTTGCACTTAATT 59.821 33.333 1.29 0.00 0.00 1.40
2712 5120 6.665248 AGGCCTAAATCTTCTTTGCACTTAAT 59.335 34.615 1.29 0.00 0.00 1.40
2713 5121 6.010219 AGGCCTAAATCTTCTTTGCACTTAA 58.990 36.000 1.29 0.00 0.00 1.85
2714 5122 5.570320 AGGCCTAAATCTTCTTTGCACTTA 58.430 37.500 1.29 0.00 0.00 2.24
2715 5123 4.411013 AGGCCTAAATCTTCTTTGCACTT 58.589 39.130 1.29 0.00 0.00 3.16
2716 5124 4.039603 AGGCCTAAATCTTCTTTGCACT 57.960 40.909 1.29 0.00 0.00 4.40
2717 5125 5.897377 TTAGGCCTAAATCTTCTTTGCAC 57.103 39.130 23.21 0.00 0.00 4.57
2718 5126 8.588290 TTAATTAGGCCTAAATCTTCTTTGCA 57.412 30.769 28.50 1.56 0.00 4.08


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.