Multiple sequence alignment - TraesCS4A01G007800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS4A01G007800 chr4A 100.000 1981 0 0 937 2917 4834389 4832409 0.000000e+00 3659.0
1 TraesCS4A01G007800 chr4A 100.000 615 0 0 1 615 4835325 4834711 0.000000e+00 1136.0
2 TraesCS4A01G007800 chr4B 80.477 1885 170 92 942 2755 582572052 582573809 0.000000e+00 1260.0
3 TraesCS4A01G007800 chr4B 86.957 92 2 2 510 592 582571854 582571944 8.610000e-16 95.3
4 TraesCS4A01G007800 chr4B 92.593 54 3 1 158 210 582571660 582571713 3.120000e-10 76.8
5 TraesCS4A01G007800 chr4D 81.849 1493 109 76 942 2393 465618858 465620229 0.000000e+00 1107.0
6 TraesCS4A01G007800 chr4D 83.610 421 31 17 229 615 465618368 465618784 7.680000e-96 361.0
7 TraesCS4A01G007800 chr4D 85.000 240 20 8 2651 2885 465743218 465743446 2.260000e-56 230.0
8 TraesCS4A01G007800 chr5A 84.559 136 18 3 21 155 55029314 55029447 6.560000e-27 132.0
9 TraesCS4A01G007800 chr7D 83.333 144 20 4 21 163 386511628 386511768 2.360000e-26 130.0
10 TraesCS4A01G007800 chr7D 79.878 164 22 10 13 168 524912492 524912652 3.070000e-20 110.0
11 TraesCS4A01G007800 chr1B 81.250 160 16 11 21 169 424103 424259 1.840000e-22 117.0
12 TraesCS4A01G007800 chr1B 81.250 160 16 11 21 169 430912 431068 1.840000e-22 117.0
13 TraesCS4A01G007800 chr1B 80.921 152 21 6 21 166 67537592 67537443 2.380000e-21 113.0
14 TraesCS4A01G007800 chr1B 80.000 165 24 8 11 168 668073244 668073406 2.380000e-21 113.0
15 TraesCS4A01G007800 chr6D 80.392 153 24 3 21 167 444450849 444450697 8.550000e-21 111.0
16 TraesCS4A01G007800 chr3A 80.128 156 19 10 28 175 41244631 41244480 3.980000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS4A01G007800 chr4A 4832409 4835325 2916 True 2397.500000 3659 100.000000 1 2917 2 chr4A.!!$R1 2916
1 TraesCS4A01G007800 chr4B 582571660 582573809 2149 False 477.366667 1260 86.675667 158 2755 3 chr4B.!!$F1 2597
2 TraesCS4A01G007800 chr4D 465618368 465620229 1861 False 734.000000 1107 82.729500 229 2393 2 chr4D.!!$F2 2164

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
263 374 1.069022 CGGTTCATGCAACTTGGTCAG 60.069 52.381 0.0 0.0 35.06 3.51 F
1077 1233 0.095589 CCAAGAGACGAGACGAGACG 59.904 60.000 0.0 0.0 0.00 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1469 1655 0.108424 CGAAGAACCTCTGCAGGGAG 60.108 60.0 17.43 7.93 45.53 4.30 R
2863 3129 0.036010 AAACACGATCTCAGCCCAGG 60.036 55.0 0.00 0.00 0.00 4.45 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 6.507023 CCTTCATACATATTGCCTTTGTTCC 58.493 40.000 0.00 0.00 0.00 3.62
25 26 6.322201 CCTTCATACATATTGCCTTTGTTCCT 59.678 38.462 0.00 0.00 0.00 3.36
26 27 6.698008 TCATACATATTGCCTTTGTTCCTG 57.302 37.500 0.00 0.00 0.00 3.86
27 28 6.422333 TCATACATATTGCCTTTGTTCCTGA 58.578 36.000 0.00 0.00 0.00 3.86
28 29 6.889177 TCATACATATTGCCTTTGTTCCTGAA 59.111 34.615 0.00 0.00 0.00 3.02
29 30 7.560991 TCATACATATTGCCTTTGTTCCTGAAT 59.439 33.333 0.00 0.00 0.00 2.57
30 31 8.849168 CATACATATTGCCTTTGTTCCTGAATA 58.151 33.333 0.00 0.00 0.00 1.75
31 32 7.902920 ACATATTGCCTTTGTTCCTGAATAT 57.097 32.000 0.00 0.00 0.00 1.28
32 33 8.995027 ACATATTGCCTTTGTTCCTGAATATA 57.005 30.769 0.00 0.00 0.00 0.86
33 34 9.420118 ACATATTGCCTTTGTTCCTGAATATAA 57.580 29.630 0.00 0.00 0.00 0.98
34 35 9.903682 CATATTGCCTTTGTTCCTGAATATAAG 57.096 33.333 0.00 0.00 0.00 1.73
35 36 7.961326 ATTGCCTTTGTTCCTGAATATAAGT 57.039 32.000 0.00 0.00 0.00 2.24
37 38 9.646522 ATTGCCTTTGTTCCTGAATATAAGTAT 57.353 29.630 0.00 0.00 0.00 2.12
38 39 9.474313 TTGCCTTTGTTCCTGAATATAAGTATT 57.526 29.630 0.00 0.00 33.26 1.89
39 40 9.474313 TGCCTTTGTTCCTGAATATAAGTATTT 57.526 29.630 0.00 0.00 30.75 1.40
63 64 9.787435 TTTTTAGAGGTTTCAATACAAGCTAGA 57.213 29.630 0.00 0.00 32.09 2.43
64 65 9.959721 TTTTAGAGGTTTCAATACAAGCTAGAT 57.040 29.630 0.00 0.00 32.09 1.98
67 68 7.731054 AGAGGTTTCAATACAAGCTAGATAGG 58.269 38.462 0.00 0.00 32.09 2.57
68 69 6.831976 AGGTTTCAATACAAGCTAGATAGGG 58.168 40.000 0.00 0.00 30.12 3.53
69 70 6.615726 AGGTTTCAATACAAGCTAGATAGGGA 59.384 38.462 0.00 0.00 30.12 4.20
70 71 7.293535 AGGTTTCAATACAAGCTAGATAGGGAT 59.706 37.037 0.00 0.00 30.12 3.85
71 72 7.389053 GGTTTCAATACAAGCTAGATAGGGATG 59.611 40.741 0.00 0.00 0.00 3.51
72 73 7.618019 TTCAATACAAGCTAGATAGGGATGT 57.382 36.000 0.00 0.00 0.00 3.06
73 74 8.721133 TTCAATACAAGCTAGATAGGGATGTA 57.279 34.615 0.00 0.00 0.00 2.29
74 75 8.901472 TCAATACAAGCTAGATAGGGATGTAT 57.099 34.615 0.00 0.00 34.85 2.29
75 76 9.990868 TCAATACAAGCTAGATAGGGATGTATA 57.009 33.333 3.41 0.00 32.89 1.47
80 81 9.635404 ACAAGCTAGATAGGGATGTATATAGAC 57.365 37.037 0.00 0.00 29.21 2.59
81 82 9.634021 CAAGCTAGATAGGGATGTATATAGACA 57.366 37.037 2.07 2.07 29.21 3.41
115 116 8.480643 AGTGTAGATTCACTTTATTTTCTCCG 57.519 34.615 0.00 0.00 44.92 4.63
116 117 8.095169 AGTGTAGATTCACTTTATTTTCTCCGT 58.905 33.333 0.00 0.00 44.92 4.69
117 118 8.381387 GTGTAGATTCACTTTATTTTCTCCGTC 58.619 37.037 0.00 0.00 35.68 4.79
118 119 8.311836 TGTAGATTCACTTTATTTTCTCCGTCT 58.688 33.333 0.00 0.00 0.00 4.18
119 120 7.835634 AGATTCACTTTATTTTCTCCGTCTC 57.164 36.000 0.00 0.00 0.00 3.36
120 121 7.616313 AGATTCACTTTATTTTCTCCGTCTCT 58.384 34.615 0.00 0.00 0.00 3.10
121 122 8.097662 AGATTCACTTTATTTTCTCCGTCTCTT 58.902 33.333 0.00 0.00 0.00 2.85
122 123 8.622948 ATTCACTTTATTTTCTCCGTCTCTTT 57.377 30.769 0.00 0.00 0.00 2.52
123 124 8.446599 TTCACTTTATTTTCTCCGTCTCTTTT 57.553 30.769 0.00 0.00 0.00 2.27
124 125 8.446599 TCACTTTATTTTCTCCGTCTCTTTTT 57.553 30.769 0.00 0.00 0.00 1.94
125 126 8.342634 TCACTTTATTTTCTCCGTCTCTTTTTG 58.657 33.333 0.00 0.00 0.00 2.44
126 127 7.591426 CACTTTATTTTCTCCGTCTCTTTTTGG 59.409 37.037 0.00 0.00 0.00 3.28
127 128 7.501225 ACTTTATTTTCTCCGTCTCTTTTTGGA 59.499 33.333 0.00 0.00 0.00 3.53
128 129 7.811117 TTATTTTCTCCGTCTCTTTTTGGAA 57.189 32.000 0.00 0.00 0.00 3.53
129 130 6.901081 ATTTTCTCCGTCTCTTTTTGGAAT 57.099 33.333 0.00 0.00 0.00 3.01
130 131 5.941948 TTTCTCCGTCTCTTTTTGGAATC 57.058 39.130 0.00 0.00 0.00 2.52
131 132 4.891992 TCTCCGTCTCTTTTTGGAATCT 57.108 40.909 0.00 0.00 0.00 2.40
132 133 4.822026 TCTCCGTCTCTTTTTGGAATCTC 58.178 43.478 0.00 0.00 0.00 2.75
133 134 4.528596 TCTCCGTCTCTTTTTGGAATCTCT 59.471 41.667 0.00 0.00 0.00 3.10
134 135 5.715279 TCTCCGTCTCTTTTTGGAATCTCTA 59.285 40.000 0.00 0.00 0.00 2.43
135 136 6.210784 TCTCCGTCTCTTTTTGGAATCTCTAA 59.789 38.462 0.00 0.00 0.00 2.10
136 137 6.765403 TCCGTCTCTTTTTGGAATCTCTAAA 58.235 36.000 0.00 0.00 0.00 1.85
137 138 7.221450 TCCGTCTCTTTTTGGAATCTCTAAAA 58.779 34.615 0.00 0.00 35.50 1.52
138 139 7.387948 TCCGTCTCTTTTTGGAATCTCTAAAAG 59.612 37.037 0.00 0.00 37.94 2.27
139 140 7.361286 CCGTCTCTTTTTGGAATCTCTAAAAGG 60.361 40.741 13.45 8.18 37.94 3.11
140 141 7.387948 CGTCTCTTTTTGGAATCTCTAAAAGGA 59.612 37.037 8.86 8.86 39.36 3.36
141 142 9.067986 GTCTCTTTTTGGAATCTCTAAAAGGAA 57.932 33.333 9.97 2.23 40.42 3.36
142 143 9.813826 TCTCTTTTTGGAATCTCTAAAAGGAAT 57.186 29.630 9.97 0.00 40.42 3.01
158 159 9.783256 CTAAAAGGAATTACATTTAGAAACGGG 57.217 33.333 16.97 0.00 37.48 5.28
159 160 8.411991 AAAAGGAATTACATTTAGAAACGGGA 57.588 30.769 0.00 0.00 32.10 5.14
160 161 7.625828 AAGGAATTACATTTAGAAACGGGAG 57.374 36.000 0.00 0.00 0.00 4.30
161 162 6.120220 AGGAATTACATTTAGAAACGGGAGG 58.880 40.000 0.00 0.00 0.00 4.30
162 163 5.298527 GGAATTACATTTAGAAACGGGAGGG 59.701 44.000 0.00 0.00 0.00 4.30
163 164 2.801077 ACATTTAGAAACGGGAGGGG 57.199 50.000 0.00 0.00 0.00 4.79
164 165 1.990327 ACATTTAGAAACGGGAGGGGT 59.010 47.619 0.00 0.00 0.00 4.95
165 166 3.183801 ACATTTAGAAACGGGAGGGGTA 58.816 45.455 0.00 0.00 0.00 3.69
166 167 3.199289 ACATTTAGAAACGGGAGGGGTAG 59.801 47.826 0.00 0.00 0.00 3.18
167 168 2.629017 TTAGAAACGGGAGGGGTAGT 57.371 50.000 0.00 0.00 0.00 2.73
168 169 2.629017 TAGAAACGGGAGGGGTAGTT 57.371 50.000 0.00 0.00 0.00 2.24
169 170 1.273759 AGAAACGGGAGGGGTAGTTC 58.726 55.000 0.00 0.00 0.00 3.01
175 176 3.036819 ACGGGAGGGGTAGTTCTAAATC 58.963 50.000 0.00 0.00 0.00 2.17
210 211 1.571460 CAAGCTCACTGGTTCACGC 59.429 57.895 0.00 0.00 33.63 5.34
211 212 1.598130 AAGCTCACTGGTTCACGCC 60.598 57.895 0.00 0.00 0.00 5.68
212 213 3.050275 GCTCACTGGTTCACGCCC 61.050 66.667 0.00 0.00 0.00 6.13
263 374 1.069022 CGGTTCATGCAACTTGGTCAG 60.069 52.381 0.00 0.00 35.06 3.51
267 378 4.262164 GGTTCATGCAACTTGGTCAGAAAT 60.262 41.667 0.00 0.00 35.06 2.17
268 379 5.291971 GTTCATGCAACTTGGTCAGAAATT 58.708 37.500 0.00 0.00 31.50 1.82
269 380 5.534207 TCATGCAACTTGGTCAGAAATTT 57.466 34.783 0.00 0.00 0.00 1.82
274 385 7.532682 TGCAACTTGGTCAGAAATTTAAAAC 57.467 32.000 0.00 0.00 0.00 2.43
275 386 7.099764 TGCAACTTGGTCAGAAATTTAAAACA 58.900 30.769 0.00 0.00 0.00 2.83
300 411 6.737254 TTTTCAAAAACGAGAGACAGAAGT 57.263 33.333 0.00 0.00 0.00 3.01
325 436 4.495690 AGAGATGAAACTAGAAAGCCCC 57.504 45.455 0.00 0.00 0.00 5.80
326 437 3.201045 AGAGATGAAACTAGAAAGCCCCC 59.799 47.826 0.00 0.00 0.00 5.40
386 497 1.463056 TGCGAGATAAAACAAGTGGCG 59.537 47.619 0.00 0.00 0.00 5.69
394 505 3.530910 AACAAGTGGCGGGAGACGG 62.531 63.158 0.00 0.00 45.14 4.79
439 569 1.292223 CGGCGACAGGGAGAGAAAA 59.708 57.895 0.00 0.00 0.00 2.29
451 581 6.322456 ACAGGGAGAGAAAAGAAAAGAAAAGG 59.678 38.462 0.00 0.00 0.00 3.11
452 582 6.322456 CAGGGAGAGAAAAGAAAAGAAAAGGT 59.678 38.462 0.00 0.00 0.00 3.50
453 583 6.547880 AGGGAGAGAAAAGAAAAGAAAAGGTC 59.452 38.462 0.00 0.00 0.00 3.85
468 600 2.432628 GTCGCAACTCTCCCACCG 60.433 66.667 0.00 0.00 0.00 4.94
490 622 2.947118 TACGCATCCGTCGCCATCAC 62.947 60.000 0.00 0.00 46.39 3.06
497 629 4.028490 GTCGCCATCACCCACCCA 62.028 66.667 0.00 0.00 0.00 4.51
503 635 1.536676 CATCACCCACCCATACCCC 59.463 63.158 0.00 0.00 0.00 4.95
577 724 4.985409 CCTTCACTCGCCTAATCTATTCAC 59.015 45.833 0.00 0.00 0.00 3.18
578 725 4.224715 TCACTCGCCTAATCTATTCACG 57.775 45.455 0.00 0.00 0.00 4.35
973 1128 4.489771 CCCCCACAGCCATCCGTC 62.490 72.222 0.00 0.00 0.00 4.79
992 1147 1.665916 CACAGAGTCACCACAGCCG 60.666 63.158 0.00 0.00 0.00 5.52
1015 1170 1.364626 CGCAGCTCCATCTTCACCAC 61.365 60.000 0.00 0.00 0.00 4.16
1017 1172 0.742281 CAGCTCCATCTTCACCACCG 60.742 60.000 0.00 0.00 0.00 4.94
1039 1195 1.729484 TCGTCAACGAGAAGCAGCG 60.729 57.895 0.22 0.00 44.22 5.18
1040 1196 2.720758 CGTCAACGAGAAGCAGCGG 61.721 63.158 0.00 0.00 43.02 5.52
1041 1197 2.738521 TCAACGAGAAGCAGCGGC 60.739 61.111 0.00 0.00 41.61 6.53
1072 1228 2.202492 CGGCCAAGAGACGAGACG 60.202 66.667 2.24 0.00 0.00 4.18
1073 1229 2.687805 CGGCCAAGAGACGAGACGA 61.688 63.158 2.24 0.00 0.00 4.20
1074 1230 1.137825 GGCCAAGAGACGAGACGAG 59.862 63.158 0.00 0.00 0.00 4.18
1075 1231 1.306642 GGCCAAGAGACGAGACGAGA 61.307 60.000 0.00 0.00 0.00 4.04
1076 1232 0.179184 GCCAAGAGACGAGACGAGAC 60.179 60.000 0.00 0.00 0.00 3.36
1077 1233 0.095589 CCAAGAGACGAGACGAGACG 59.904 60.000 0.00 0.00 0.00 4.18
1078 1234 1.069255 CAAGAGACGAGACGAGACGA 58.931 55.000 0.00 0.00 0.00 4.20
1079 1235 1.059979 CAAGAGACGAGACGAGACGAG 59.940 57.143 0.00 0.00 0.00 4.18
1080 1236 0.527113 AGAGACGAGACGAGACGAGA 59.473 55.000 0.00 0.00 0.00 4.04
1081 1237 0.918619 GAGACGAGACGAGACGAGAG 59.081 60.000 0.00 0.00 0.00 3.20
1185 1341 1.494960 GGAGCAGAAGATGTCCTCCT 58.505 55.000 0.00 0.00 0.00 3.69
1186 1345 1.412343 GGAGCAGAAGATGTCCTCCTC 59.588 57.143 0.00 0.00 0.00 3.71
1334 1502 2.362760 TTCTACGGCGGCAGGGTA 60.363 61.111 13.24 2.19 0.00 3.69
1469 1655 3.908081 CCCATCATGCGCAAGGCC 61.908 66.667 17.11 0.00 42.61 5.19
1472 1658 2.517875 ATCATGCGCAAGGCCTCC 60.518 61.111 17.11 0.00 42.61 4.30
1634 1835 2.964389 GCCTTCGCGCTCTGATCC 60.964 66.667 5.56 0.00 0.00 3.36
1635 1836 2.656651 CCTTCGCGCTCTGATCCG 60.657 66.667 5.56 0.00 0.00 4.18
1636 1837 2.656651 CTTCGCGCTCTGATCCGG 60.657 66.667 5.56 0.00 0.00 5.14
1637 1838 3.126074 CTTCGCGCTCTGATCCGGA 62.126 63.158 6.61 6.61 0.00 5.14
1673 1874 2.433318 AAGACGGCTTGCTCGCTC 60.433 61.111 0.45 0.00 31.83 5.03
1674 1875 4.785512 AGACGGCTTGCTCGCTCG 62.786 66.667 0.00 3.34 0.00 5.03
1683 1884 2.883253 GCTCGCTCGCCTCAAGAC 60.883 66.667 0.00 0.00 0.00 3.01
1703 1904 4.686554 AGACATCGTTTGTAGAGCACTTTC 59.313 41.667 0.00 0.00 39.18 2.62
1705 1906 4.814234 ACATCGTTTGTAGAGCACTTTCAA 59.186 37.500 0.00 0.00 36.57 2.69
1706 1907 5.470098 ACATCGTTTGTAGAGCACTTTCAAT 59.530 36.000 0.00 0.00 36.57 2.57
1707 1908 6.017109 ACATCGTTTGTAGAGCACTTTCAATT 60.017 34.615 0.00 0.00 36.57 2.32
1708 1909 6.371809 TCGTTTGTAGAGCACTTTCAATTT 57.628 33.333 0.00 0.00 0.00 1.82
1709 1910 6.791303 TCGTTTGTAGAGCACTTTCAATTTT 58.209 32.000 0.00 0.00 0.00 1.82
1740 1941 8.926715 ATTCTTTGGGTAAAAATTCGAATAGC 57.073 30.769 11.83 5.19 0.00 2.97
1778 1982 8.510505 AGAAAGAAACAAGATTGAGTTCATAGC 58.489 33.333 0.00 0.00 32.25 2.97
1786 1990 2.698855 TGAGTTCATAGCAAGCCCTC 57.301 50.000 0.00 0.00 0.00 4.30
1793 1997 3.347216 TCATAGCAAGCCCTCTTTGTTC 58.653 45.455 0.00 0.00 0.00 3.18
1795 1999 0.179018 AGCAAGCCCTCTTTGTTCGT 60.179 50.000 0.00 0.00 0.00 3.85
1797 2001 1.335051 GCAAGCCCTCTTTGTTCGTTC 60.335 52.381 0.00 0.00 0.00 3.95
1800 2004 0.942252 GCCCTCTTTGTTCGTTCGTT 59.058 50.000 0.00 0.00 0.00 3.85
1801 2005 1.332686 GCCCTCTTTGTTCGTTCGTTT 59.667 47.619 0.00 0.00 0.00 3.60
1802 2006 2.853281 GCCCTCTTTGTTCGTTCGTTTG 60.853 50.000 0.00 0.00 0.00 2.93
1803 2007 2.610374 CCCTCTTTGTTCGTTCGTTTGA 59.390 45.455 0.00 0.00 0.00 2.69
1804 2008 3.250040 CCCTCTTTGTTCGTTCGTTTGAT 59.750 43.478 0.00 0.00 0.00 2.57
1808 2012 5.870444 TCTTTGTTCGTTCGTTTGATTTGA 58.130 33.333 0.00 0.00 0.00 2.69
1810 2014 6.631238 TCTTTGTTCGTTCGTTTGATTTGATC 59.369 34.615 0.00 0.00 0.00 2.92
1844 2048 1.194098 GATTTCTGCGCGGATCATCAG 59.806 52.381 21.71 5.43 0.00 2.90
1845 2049 1.431488 TTTCTGCGCGGATCATCAGC 61.431 55.000 21.71 0.00 34.21 4.26
1856 2060 0.107066 ATCATCAGCCATGGTTCGCA 60.107 50.000 14.67 0.00 32.64 5.10
1861 2069 1.073025 AGCCATGGTTCGCACAGAA 59.927 52.632 14.67 0.00 36.31 3.02
1863 2071 0.387239 GCCATGGTTCGCACAGAAAC 60.387 55.000 14.67 0.00 46.53 2.78
1864 2072 0.240945 CCATGGTTCGCACAGAAACC 59.759 55.000 2.57 0.00 45.80 3.27
1865 2073 0.240945 CATGGTTCGCACAGAAACCC 59.759 55.000 2.08 0.00 45.80 4.11
1866 2074 0.179004 ATGGTTCGCACAGAAACCCA 60.179 50.000 2.08 0.00 45.80 4.51
1867 2075 0.817634 TGGTTCGCACAGAAACCCAG 60.818 55.000 2.08 0.00 45.80 4.45
1906 2114 8.013378 ACCGAACAATAACTTGAAATAAAGACG 58.987 33.333 0.00 0.00 36.20 4.18
1910 2118 9.878599 AACAATAACTTGAAATAAAGACGAGTG 57.121 29.630 0.00 0.00 36.20 3.51
1915 2127 5.638234 ACTTGAAATAAAGACGAGTGCTACC 59.362 40.000 0.00 0.00 0.00 3.18
1929 2141 1.601903 TGCTACCAGCTTCAAACAACG 59.398 47.619 0.00 0.00 42.97 4.10
1930 2142 1.663161 GCTACCAGCTTCAAACAACGC 60.663 52.381 0.00 0.00 38.45 4.84
1934 2146 1.600413 CCAGCTTCAAACAACGCTTCC 60.600 52.381 0.00 0.00 0.00 3.46
1938 2150 1.946768 CTTCAAACAACGCTTCCTCCA 59.053 47.619 0.00 0.00 0.00 3.86
1940 2152 1.879380 TCAAACAACGCTTCCTCCATG 59.121 47.619 0.00 0.00 0.00 3.66
1943 2155 0.687354 ACAACGCTTCCTCCATGTCT 59.313 50.000 0.00 0.00 0.00 3.41
1947 2159 1.300963 GCTTCCTCCATGTCTGGCA 59.699 57.895 0.00 0.00 42.80 4.92
1952 2164 0.812811 CCTCCATGTCTGGCATCACG 60.813 60.000 0.00 0.00 42.80 4.35
1955 2167 1.091771 CCATGTCTGGCATCACGACC 61.092 60.000 0.00 0.00 35.19 4.79
1956 2168 0.391528 CATGTCTGGCATCACGACCA 60.392 55.000 0.00 0.00 35.19 4.02
1957 2169 0.391661 ATGTCTGGCATCACGACCAC 60.392 55.000 2.61 0.00 30.67 4.16
1958 2170 2.094659 GTCTGGCATCACGACCACG 61.095 63.158 0.00 0.00 45.75 4.94
1961 2173 2.261671 GGCATCACGACCACGACT 59.738 61.111 0.00 0.00 42.66 4.18
1962 2174 1.245376 TGGCATCACGACCACGACTA 61.245 55.000 0.00 0.00 42.66 2.59
1963 2175 0.525668 GGCATCACGACCACGACTAG 60.526 60.000 0.00 0.00 42.66 2.57
1964 2176 1.140407 GCATCACGACCACGACTAGC 61.140 60.000 0.00 0.00 42.66 3.42
1965 2177 0.170339 CATCACGACCACGACTAGCA 59.830 55.000 0.00 0.00 42.66 3.49
1969 2181 1.801913 CGACCACGACTAGCACAGC 60.802 63.158 0.00 0.00 42.66 4.40
1970 2182 1.587054 GACCACGACTAGCACAGCT 59.413 57.895 0.00 0.00 43.41 4.24
1971 2183 0.809385 GACCACGACTAGCACAGCTA 59.191 55.000 0.00 0.00 40.44 3.32
1972 2184 0.526662 ACCACGACTAGCACAGCTAC 59.473 55.000 0.00 0.00 40.44 3.58
1973 2185 0.523546 CCACGACTAGCACAGCTACG 60.524 60.000 7.28 7.28 40.44 3.51
1974 2186 0.446616 CACGACTAGCACAGCTACGA 59.553 55.000 13.58 0.00 40.44 3.43
1975 2187 1.064208 CACGACTAGCACAGCTACGAT 59.936 52.381 13.58 0.00 40.44 3.73
1976 2188 1.743958 ACGACTAGCACAGCTACGATT 59.256 47.619 13.58 0.00 40.44 3.34
1977 2189 2.941064 ACGACTAGCACAGCTACGATTA 59.059 45.455 13.58 0.00 40.44 1.75
1978 2190 3.242673 ACGACTAGCACAGCTACGATTAC 60.243 47.826 13.58 0.00 40.44 1.89
1979 2191 3.630101 GACTAGCACAGCTACGATTACC 58.370 50.000 0.00 0.00 40.44 2.85
1980 2192 3.021695 ACTAGCACAGCTACGATTACCA 58.978 45.455 0.00 0.00 40.44 3.25
1981 2193 3.637229 ACTAGCACAGCTACGATTACCAT 59.363 43.478 0.00 0.00 40.44 3.55
1982 2194 3.099267 AGCACAGCTACGATTACCATC 57.901 47.619 0.00 0.00 36.99 3.51
1983 2195 2.695666 AGCACAGCTACGATTACCATCT 59.304 45.455 0.00 0.00 36.99 2.90
1984 2196 3.133003 AGCACAGCTACGATTACCATCTT 59.867 43.478 0.00 0.00 36.99 2.40
1985 2197 3.246226 GCACAGCTACGATTACCATCTTG 59.754 47.826 0.00 0.00 0.00 3.02
1986 2198 4.682787 CACAGCTACGATTACCATCTTGA 58.317 43.478 0.00 0.00 0.00 3.02
1987 2199 4.742167 CACAGCTACGATTACCATCTTGAG 59.258 45.833 0.00 0.00 0.00 3.02
1988 2200 4.402793 ACAGCTACGATTACCATCTTGAGT 59.597 41.667 0.00 0.00 0.00 3.41
1989 2201 5.593095 ACAGCTACGATTACCATCTTGAGTA 59.407 40.000 0.00 0.00 0.00 2.59
1990 2202 5.915758 CAGCTACGATTACCATCTTGAGTAC 59.084 44.000 0.00 0.00 0.00 2.73
1991 2203 4.910456 GCTACGATTACCATCTTGAGTACG 59.090 45.833 0.00 0.00 0.00 3.67
1992 2204 4.978083 ACGATTACCATCTTGAGTACGT 57.022 40.909 0.00 0.00 0.00 3.57
1993 2205 6.293081 GCTACGATTACCATCTTGAGTACGTA 60.293 42.308 0.00 0.00 0.00 3.57
1994 2206 6.630444 ACGATTACCATCTTGAGTACGTAT 57.370 37.500 0.00 0.00 0.00 3.06
1995 2207 6.436261 ACGATTACCATCTTGAGTACGTATG 58.564 40.000 0.00 0.00 0.00 2.39
1996 2208 5.342525 CGATTACCATCTTGAGTACGTATGC 59.657 44.000 0.00 0.00 0.00 3.14
1997 2209 3.454371 ACCATCTTGAGTACGTATGCC 57.546 47.619 0.00 0.00 0.00 4.40
1998 2210 2.764010 ACCATCTTGAGTACGTATGCCA 59.236 45.455 0.00 0.00 0.00 4.92
1999 2211 3.388024 ACCATCTTGAGTACGTATGCCAT 59.612 43.478 0.00 0.00 0.00 4.40
2000 2212 3.742882 CCATCTTGAGTACGTATGCCATG 59.257 47.826 0.00 0.61 0.00 3.66
2001 2213 4.501400 CCATCTTGAGTACGTATGCCATGA 60.501 45.833 0.00 5.83 0.00 3.07
2002 2214 4.937201 TCTTGAGTACGTATGCCATGAT 57.063 40.909 0.00 0.00 0.00 2.45
2003 2215 4.871513 TCTTGAGTACGTATGCCATGATC 58.128 43.478 0.00 0.00 0.00 2.92
2020 2232 3.278574 TGATCCCATGAACCGAAATGTC 58.721 45.455 0.00 0.00 0.00 3.06
2023 2235 3.081061 TCCCATGAACCGAAATGTCAAG 58.919 45.455 0.00 0.00 0.00 3.02
2024 2236 2.164219 CCCATGAACCGAAATGTCAAGG 59.836 50.000 0.00 0.00 0.00 3.61
2025 2237 2.164219 CCATGAACCGAAATGTCAAGGG 59.836 50.000 0.00 0.00 0.00 3.95
2045 2270 3.348119 GGAAGAAACCCATCTCCAGTTC 58.652 50.000 0.00 0.00 0.00 3.01
2054 2279 0.674895 ATCTCCAGTTCGGCAAGCAC 60.675 55.000 0.00 0.00 33.14 4.40
2055 2280 2.664851 TCCAGTTCGGCAAGCACG 60.665 61.111 0.00 0.00 33.14 5.34
2066 2292 1.133253 CAAGCACGAGTTCATGGCG 59.867 57.895 0.00 0.00 0.00 5.69
2067 2293 2.034879 AAGCACGAGTTCATGGCGG 61.035 57.895 0.00 0.00 0.00 6.13
2068 2294 2.434185 GCACGAGTTCATGGCGGA 60.434 61.111 0.00 0.00 0.00 5.54
2069 2295 2.456119 GCACGAGTTCATGGCGGAG 61.456 63.158 0.00 0.00 0.00 4.63
2070 2296 1.811266 CACGAGTTCATGGCGGAGG 60.811 63.158 0.00 0.00 0.00 4.30
2100 2326 0.602905 GGTGGGTGAGAAACGGTCAG 60.603 60.000 0.00 0.00 0.00 3.51
2127 2362 1.600413 GGGAGCGCAACTTGTCAAAAG 60.600 52.381 11.47 0.00 0.00 2.27
2178 2413 4.218478 GCGTACGCGTCATTGCCC 62.218 66.667 26.17 0.00 40.81 5.36
2182 2417 0.179200 GTACGCGTCATTGCCCTTTG 60.179 55.000 18.63 0.00 0.00 2.77
2190 2425 3.735746 CGTCATTGCCCTTTGTTTTTCTC 59.264 43.478 0.00 0.00 0.00 2.87
2201 2440 7.537649 GCCCTTTGTTTTTCTCTTAGAATAACG 59.462 37.037 14.19 5.26 44.02 3.18
2202 2441 8.780249 CCCTTTGTTTTTCTCTTAGAATAACGA 58.220 33.333 14.19 11.27 44.02 3.85
2211 2450 7.772332 TCTCTTAGAATAACGAAGAAATGGC 57.228 36.000 0.00 0.00 39.12 4.40
2230 2469 2.474266 CACGTTCATGGCGTTCCG 59.526 61.111 12.26 0.83 40.90 4.30
2232 2471 3.496131 CGTTCATGGCGTTCCGGG 61.496 66.667 0.00 0.00 34.14 5.73
2233 2472 3.131478 GTTCATGGCGTTCCGGGG 61.131 66.667 0.00 0.00 34.14 5.73
2234 2473 4.418328 TTCATGGCGTTCCGGGGG 62.418 66.667 0.00 0.00 34.14 5.40
2243 2482 3.595664 TTCCGGGGGAACAACCAT 58.404 55.556 0.00 0.00 36.71 3.55
2244 2483 1.854874 TTCCGGGGGAACAACCATT 59.145 52.632 0.00 0.00 36.71 3.16
2245 2484 0.540830 TTCCGGGGGAACAACCATTG 60.541 55.000 0.00 0.00 36.71 2.82
2246 2485 2.645192 CCGGGGGAACAACCATTGC 61.645 63.158 0.00 0.00 41.20 3.56
2247 2486 1.606313 CGGGGGAACAACCATTGCT 60.606 57.895 0.00 0.00 41.20 3.91
2248 2487 1.595093 CGGGGGAACAACCATTGCTC 61.595 60.000 0.00 0.00 41.20 4.26
2368 2623 0.612174 CTCTCCTCCTCCAACGTGGA 60.612 60.000 0.00 0.00 45.98 4.02
2369 2624 0.898789 TCTCCTCCTCCAACGTGGAC 60.899 60.000 0.00 0.00 42.67 4.02
2370 2625 2.214181 CTCCTCCTCCAACGTGGACG 62.214 65.000 0.00 0.00 42.67 4.79
2414 2680 2.551270 CCTCGTGAAAGCGTGTGC 59.449 61.111 0.00 0.00 43.24 4.57
2425 2691 2.509336 CGTGTGCTGATCCGACCC 60.509 66.667 0.00 0.00 0.00 4.46
2429 2695 1.810030 GTGCTGATCCGACCCGAAC 60.810 63.158 0.00 0.00 0.00 3.95
2430 2696 2.582498 GCTGATCCGACCCGAACG 60.582 66.667 0.00 0.00 0.00 3.95
2431 2697 2.882876 CTGATCCGACCCGAACGT 59.117 61.111 0.00 0.00 0.00 3.99
2432 2698 1.516386 CTGATCCGACCCGAACGTG 60.516 63.158 0.00 0.00 0.00 4.49
2433 2699 1.929806 CTGATCCGACCCGAACGTGA 61.930 60.000 0.00 0.00 0.00 4.35
2434 2700 1.515736 GATCCGACCCGAACGTGAC 60.516 63.158 0.00 0.00 0.00 3.67
2435 2701 2.203972 GATCCGACCCGAACGTGACA 62.204 60.000 0.00 0.00 0.00 3.58
2436 2702 2.209064 ATCCGACCCGAACGTGACAG 62.209 60.000 0.00 0.00 0.00 3.51
2437 2703 3.103911 CGACCCGAACGTGACAGC 61.104 66.667 0.00 0.00 0.00 4.40
2438 2704 3.103911 GACCCGAACGTGACAGCG 61.104 66.667 0.00 0.00 37.94 5.18
2439 2705 4.657824 ACCCGAACGTGACAGCGG 62.658 66.667 0.00 0.00 43.20 5.52
2440 2706 4.351938 CCCGAACGTGACAGCGGA 62.352 66.667 13.33 0.00 46.29 5.54
2441 2707 2.805353 CCGAACGTGACAGCGGAG 60.805 66.667 7.91 0.00 46.29 4.63
2442 2708 2.805353 CGAACGTGACAGCGGAGG 60.805 66.667 0.00 0.00 35.98 4.30
2443 2709 2.649034 GAACGTGACAGCGGAGGA 59.351 61.111 0.00 0.00 35.98 3.71
2444 2710 1.444553 GAACGTGACAGCGGAGGAG 60.445 63.158 0.00 0.00 35.98 3.69
2445 2711 3.575351 AACGTGACAGCGGAGGAGC 62.575 63.158 0.00 0.00 35.98 4.70
2455 2721 2.574399 GGAGGAGCGAGTGTGGAC 59.426 66.667 0.00 0.00 0.00 4.02
2458 2724 4.436998 GGAGCGAGTGTGGACGGG 62.437 72.222 0.00 0.00 0.00 5.28
2459 2725 4.436998 GAGCGAGTGTGGACGGGG 62.437 72.222 0.00 0.00 0.00 5.73
2485 2751 2.031616 ATCCATGGATGCTCGCCG 59.968 61.111 26.78 0.00 32.98 6.46
2486 2752 3.541950 ATCCATGGATGCTCGCCGG 62.542 63.158 26.78 0.00 32.98 6.13
2506 2772 2.031420 GGAACGGAGTGGTTTACTTTGC 60.031 50.000 0.00 0.00 45.00 3.68
2507 2773 1.223187 ACGGAGTGGTTTACTTTGCG 58.777 50.000 0.00 0.00 42.51 4.85
2508 2774 0.110373 CGGAGTGGTTTACTTTGCGC 60.110 55.000 0.00 0.00 40.53 6.09
2509 2775 0.240145 GGAGTGGTTTACTTTGCGCC 59.760 55.000 4.18 0.00 40.53 6.53
2510 2776 0.240145 GAGTGGTTTACTTTGCGCCC 59.760 55.000 4.18 0.00 40.53 6.13
2511 2777 0.179001 AGTGGTTTACTTTGCGCCCT 60.179 50.000 4.18 0.00 35.67 5.19
2512 2778 0.039527 GTGGTTTACTTTGCGCCCTG 60.040 55.000 4.18 0.00 0.00 4.45
2513 2779 1.080772 GGTTTACTTTGCGCCCTGC 60.081 57.895 4.18 0.00 46.70 4.85
2536 2802 2.361737 GGGGCTGGAGGTGCTTTC 60.362 66.667 0.00 0.00 0.00 2.62
2549 2815 3.479269 CTTTCCTCGTCGGCGCAC 61.479 66.667 10.83 0.00 38.14 5.34
2589 2855 2.871427 GATTCGGTCGGTGATGCGC 61.871 63.158 0.00 0.00 0.00 6.09
2590 2856 3.371097 ATTCGGTCGGTGATGCGCT 62.371 57.895 9.73 0.00 0.00 5.92
2592 2858 4.498520 CGGTCGGTGATGCGCTCT 62.499 66.667 9.73 0.00 0.00 4.09
2593 2859 2.887568 GGTCGGTGATGCGCTCTG 60.888 66.667 9.73 1.92 0.00 3.35
2594 2860 2.125912 GTCGGTGATGCGCTCTGT 60.126 61.111 9.73 0.00 0.00 3.41
2595 2861 2.161486 GTCGGTGATGCGCTCTGTC 61.161 63.158 9.73 2.19 0.00 3.51
2596 2862 2.182791 CGGTGATGCGCTCTGTCT 59.817 61.111 9.73 0.00 0.00 3.41
2597 2863 2.163390 CGGTGATGCGCTCTGTCTG 61.163 63.158 9.73 0.00 0.00 3.51
2598 2864 2.459442 GGTGATGCGCTCTGTCTGC 61.459 63.158 9.73 0.06 0.00 4.26
2599 2865 2.125391 TGATGCGCTCTGTCTGCC 60.125 61.111 9.73 0.00 0.00 4.85
2600 2866 2.894387 GATGCGCTCTGTCTGCCC 60.894 66.667 9.73 0.00 0.00 5.36
2601 2867 4.479993 ATGCGCTCTGTCTGCCCC 62.480 66.667 9.73 0.00 0.00 5.80
2648 2914 3.021473 GCGTGGGATGGTAACGGGA 62.021 63.158 0.00 0.00 37.77 5.14
2669 2935 3.443588 AAGGAACCGGTTGCTTGC 58.556 55.556 42.05 21.57 46.95 4.01
2670 2936 1.152756 AAGGAACCGGTTGCTTGCT 60.153 52.632 42.05 25.81 46.95 3.91
2671 2937 0.755327 AAGGAACCGGTTGCTTGCTT 60.755 50.000 42.05 25.47 46.95 3.91
2672 2938 1.007387 GGAACCGGTTGCTTGCTTG 60.007 57.895 29.42 0.00 0.00 4.01
2675 2941 2.355009 CCGGTTGCTTGCTTGTGC 60.355 61.111 0.00 0.00 40.20 4.57
2676 2942 2.723746 CGGTTGCTTGCTTGTGCT 59.276 55.556 0.00 0.00 40.48 4.40
2709 2975 1.508808 TTTTTCGCCTTTCCGGACGG 61.509 55.000 1.83 9.44 34.48 4.79
2736 3002 2.292237 CGCCACGTTTTTAGTTCGTTC 58.708 47.619 0.00 0.00 35.62 3.95
2739 3005 1.951319 CACGTTTTTAGTTCGTTCGCG 59.049 47.619 0.00 0.00 42.98 5.87
2744 3010 1.878524 TTTAGTTCGTTCGCGCCACG 61.879 55.000 20.57 20.57 45.62 4.94
2755 3021 4.592192 CGCCACGCCGGATCTGAT 62.592 66.667 5.05 0.00 36.56 2.90
2756 3022 2.663188 GCCACGCCGGATCTGATC 60.663 66.667 5.05 9.18 36.56 2.92
2757 3023 2.355126 CCACGCCGGATCTGATCG 60.355 66.667 5.05 8.74 36.56 3.69
2758 3024 2.721859 CACGCCGGATCTGATCGA 59.278 61.111 5.05 0.00 0.00 3.59
2759 3025 1.371022 CACGCCGGATCTGATCGAG 60.371 63.158 5.05 7.93 0.00 4.04
2760 3026 2.256764 CGCCGGATCTGATCGAGG 59.743 66.667 19.95 19.95 0.00 4.63
2761 3027 2.653702 GCCGGATCTGATCGAGGG 59.346 66.667 23.25 18.59 0.00 4.30
2762 3028 2.936912 GCCGGATCTGATCGAGGGG 61.937 68.421 23.25 16.76 0.00 4.79
2763 3029 1.228583 CCGGATCTGATCGAGGGGA 60.229 63.158 17.75 0.00 0.00 4.81
2764 3030 1.528292 CCGGATCTGATCGAGGGGAC 61.528 65.000 17.75 1.68 0.00 4.46
2766 3032 1.710816 GGATCTGATCGAGGGGACTT 58.289 55.000 11.28 0.00 44.43 3.01
2767 3033 2.043227 GGATCTGATCGAGGGGACTTT 58.957 52.381 11.28 0.00 44.43 2.66
2768 3034 2.224161 GGATCTGATCGAGGGGACTTTG 60.224 54.545 11.28 0.00 44.43 2.77
2769 3035 0.537188 TCTGATCGAGGGGACTTTGC 59.463 55.000 0.00 0.00 44.43 3.68
2770 3036 0.539051 CTGATCGAGGGGACTTTGCT 59.461 55.000 0.00 0.00 44.43 3.91
2771 3037 0.250234 TGATCGAGGGGACTTTGCTG 59.750 55.000 0.00 0.00 44.43 4.41
2772 3038 0.250513 GATCGAGGGGACTTTGCTGT 59.749 55.000 0.00 0.00 44.43 4.40
2773 3039 0.250513 ATCGAGGGGACTTTGCTGTC 59.749 55.000 0.00 0.00 44.43 3.51
2779 3045 3.673599 GACTTTGCTGTCCTGGGC 58.326 61.111 0.00 0.00 0.00 5.36
2780 3046 2.281761 ACTTTGCTGTCCTGGGCG 60.282 61.111 0.00 0.00 0.00 6.13
2781 3047 2.032528 CTTTGCTGTCCTGGGCGA 59.967 61.111 0.00 0.00 0.00 5.54
2782 3048 2.281484 TTTGCTGTCCTGGGCGAC 60.281 61.111 0.00 0.00 0.00 5.19
2783 3049 2.738213 CTTTGCTGTCCTGGGCGACT 62.738 60.000 0.00 0.00 33.70 4.18
2784 3050 1.476845 TTTGCTGTCCTGGGCGACTA 61.477 55.000 0.00 0.00 33.70 2.59
2785 3051 1.476845 TTGCTGTCCTGGGCGACTAA 61.477 55.000 0.00 0.00 33.70 2.24
2786 3052 1.264749 TGCTGTCCTGGGCGACTAAT 61.265 55.000 0.00 0.00 33.70 1.73
2787 3053 0.530870 GCTGTCCTGGGCGACTAATC 60.531 60.000 0.00 0.00 33.70 1.75
2788 3054 1.115467 CTGTCCTGGGCGACTAATCT 58.885 55.000 0.00 0.00 33.70 2.40
2789 3055 1.482593 CTGTCCTGGGCGACTAATCTT 59.517 52.381 0.00 0.00 33.70 2.40
2790 3056 1.906574 TGTCCTGGGCGACTAATCTTT 59.093 47.619 0.00 0.00 33.70 2.52
2791 3057 2.304761 TGTCCTGGGCGACTAATCTTTT 59.695 45.455 0.00 0.00 33.70 2.27
2792 3058 3.516300 TGTCCTGGGCGACTAATCTTTTA 59.484 43.478 0.00 0.00 33.70 1.52
2793 3059 4.120589 GTCCTGGGCGACTAATCTTTTAG 58.879 47.826 0.00 0.00 40.62 1.85
2795 3061 4.957954 TCCTGGGCGACTAATCTTTTAGTA 59.042 41.667 0.00 0.00 46.32 1.82
2796 3062 5.048507 CCTGGGCGACTAATCTTTTAGTAC 58.951 45.833 0.00 0.00 46.32 2.73
2797 3063 5.163437 CCTGGGCGACTAATCTTTTAGTACT 60.163 44.000 0.00 0.00 46.32 2.73
2798 3064 6.290294 TGGGCGACTAATCTTTTAGTACTT 57.710 37.500 0.00 0.00 46.32 2.24
2799 3065 6.704310 TGGGCGACTAATCTTTTAGTACTTT 58.296 36.000 0.00 0.00 46.32 2.66
2800 3066 7.163441 TGGGCGACTAATCTTTTAGTACTTTT 58.837 34.615 0.00 0.00 46.32 2.27
2801 3067 7.662669 TGGGCGACTAATCTTTTAGTACTTTTT 59.337 33.333 0.00 0.00 46.32 1.94
2802 3068 9.154847 GGGCGACTAATCTTTTAGTACTTTTTA 57.845 33.333 0.00 0.00 46.32 1.52
2821 3087 8.612145 ACTTTTTAATAGGGAATCTAGTGGTGT 58.388 33.333 0.00 0.00 0.00 4.16
2822 3088 9.462606 CTTTTTAATAGGGAATCTAGTGGTGTT 57.537 33.333 0.00 0.00 0.00 3.32
2823 3089 8.801882 TTTTAATAGGGAATCTAGTGGTGTTG 57.198 34.615 0.00 0.00 0.00 3.33
2824 3090 5.373812 AATAGGGAATCTAGTGGTGTTGG 57.626 43.478 0.00 0.00 0.00 3.77
2825 3091 2.632537 AGGGAATCTAGTGGTGTTGGT 58.367 47.619 0.00 0.00 0.00 3.67
2826 3092 2.305927 AGGGAATCTAGTGGTGTTGGTG 59.694 50.000 0.00 0.00 0.00 4.17
2827 3093 2.618045 GGGAATCTAGTGGTGTTGGTGG 60.618 54.545 0.00 0.00 0.00 4.61
2828 3094 2.039879 GGAATCTAGTGGTGTTGGTGGT 59.960 50.000 0.00 0.00 0.00 4.16
2829 3095 2.859165 ATCTAGTGGTGTTGGTGGTG 57.141 50.000 0.00 0.00 0.00 4.17
2830 3096 0.762418 TCTAGTGGTGTTGGTGGTGG 59.238 55.000 0.00 0.00 0.00 4.61
2831 3097 0.889186 CTAGTGGTGTTGGTGGTGGC 60.889 60.000 0.00 0.00 0.00 5.01
2832 3098 2.668185 TAGTGGTGTTGGTGGTGGCG 62.668 60.000 0.00 0.00 0.00 5.69
2833 3099 3.798511 TGGTGTTGGTGGTGGCGA 61.799 61.111 0.00 0.00 0.00 5.54
2834 3100 2.978010 GGTGTTGGTGGTGGCGAG 60.978 66.667 0.00 0.00 0.00 5.03
2835 3101 3.660111 GTGTTGGTGGTGGCGAGC 61.660 66.667 0.00 0.00 0.00 5.03
2836 3102 3.872603 TGTTGGTGGTGGCGAGCT 61.873 61.111 0.00 0.00 0.00 4.09
2837 3103 3.357079 GTTGGTGGTGGCGAGCTG 61.357 66.667 0.00 0.00 0.00 4.24
2838 3104 4.641645 TTGGTGGTGGCGAGCTGG 62.642 66.667 0.00 0.00 0.00 4.85
2857 3123 3.037833 GCTGTTTGCCCGCTTTGC 61.038 61.111 0.00 0.00 35.15 3.68
2858 3124 2.730094 CTGTTTGCCCGCTTTGCT 59.270 55.556 0.00 0.00 0.00 3.91
2859 3125 1.372128 CTGTTTGCCCGCTTTGCTC 60.372 57.895 0.00 0.00 0.00 4.26
2860 3126 2.049156 GTTTGCCCGCTTTGCTCC 60.049 61.111 0.00 0.00 0.00 4.70
2861 3127 3.302344 TTTGCCCGCTTTGCTCCC 61.302 61.111 0.00 0.00 0.00 4.30
2877 3143 3.554342 CCCCCTGGGCTGAGATCG 61.554 72.222 7.39 0.00 35.35 3.69
2878 3144 2.765807 CCCCTGGGCTGAGATCGT 60.766 66.667 7.39 0.00 0.00 3.73
2879 3145 2.503061 CCCTGGGCTGAGATCGTG 59.497 66.667 0.00 0.00 0.00 4.35
2880 3146 2.362369 CCCTGGGCTGAGATCGTGT 61.362 63.158 0.00 0.00 0.00 4.49
2881 3147 1.599047 CCTGGGCTGAGATCGTGTT 59.401 57.895 0.00 0.00 0.00 3.32
2882 3148 0.036010 CCTGGGCTGAGATCGTGTTT 60.036 55.000 0.00 0.00 0.00 2.83
2883 3149 1.207089 CCTGGGCTGAGATCGTGTTTA 59.793 52.381 0.00 0.00 0.00 2.01
2884 3150 2.544685 CTGGGCTGAGATCGTGTTTAG 58.455 52.381 0.00 0.00 0.00 1.85
2885 3151 2.166459 CTGGGCTGAGATCGTGTTTAGA 59.834 50.000 0.00 0.00 0.00 2.10
2886 3152 2.094182 TGGGCTGAGATCGTGTTTAGAC 60.094 50.000 0.00 0.00 0.00 2.59
2887 3153 2.166664 GGGCTGAGATCGTGTTTAGACT 59.833 50.000 0.00 0.00 0.00 3.24
2888 3154 3.368531 GGGCTGAGATCGTGTTTAGACTT 60.369 47.826 0.00 0.00 0.00 3.01
2889 3155 4.246458 GGCTGAGATCGTGTTTAGACTTT 58.754 43.478 0.00 0.00 0.00 2.66
2890 3156 5.408356 GGCTGAGATCGTGTTTAGACTTTA 58.592 41.667 0.00 0.00 0.00 1.85
2891 3157 6.043411 GGCTGAGATCGTGTTTAGACTTTAT 58.957 40.000 0.00 0.00 0.00 1.40
2892 3158 7.201145 GGCTGAGATCGTGTTTAGACTTTATA 58.799 38.462 0.00 0.00 0.00 0.98
2893 3159 7.380065 GGCTGAGATCGTGTTTAGACTTTATAG 59.620 40.741 0.00 0.00 0.00 1.31
2894 3160 8.129840 GCTGAGATCGTGTTTAGACTTTATAGA 58.870 37.037 0.00 0.00 0.00 1.98
2895 3161 9.440784 CTGAGATCGTGTTTAGACTTTATAGAC 57.559 37.037 0.00 0.00 0.00 2.59
2896 3162 8.953313 TGAGATCGTGTTTAGACTTTATAGACA 58.047 33.333 0.00 0.00 0.00 3.41
2897 3163 9.440784 GAGATCGTGTTTAGACTTTATAGACAG 57.559 37.037 0.00 0.00 0.00 3.51
2898 3164 9.175312 AGATCGTGTTTAGACTTTATAGACAGA 57.825 33.333 0.00 0.00 0.00 3.41
2899 3165 9.224058 GATCGTGTTTAGACTTTATAGACAGAC 57.776 37.037 0.00 0.00 0.00 3.51
2900 3166 8.102800 TCGTGTTTAGACTTTATAGACAGACA 57.897 34.615 0.00 0.00 0.00 3.41
2901 3167 8.570488 TCGTGTTTAGACTTTATAGACAGACAA 58.430 33.333 0.00 0.00 0.00 3.18
2902 3168 9.188588 CGTGTTTAGACTTTATAGACAGACAAA 57.811 33.333 0.00 0.00 0.00 2.83
2909 3175 8.560374 AGACTTTATAGACAGACAAACAAAAGC 58.440 33.333 0.00 0.00 0.00 3.51
2910 3176 8.451908 ACTTTATAGACAGACAAACAAAAGCT 57.548 30.769 0.00 0.00 0.00 3.74
2911 3177 9.555727 ACTTTATAGACAGACAAACAAAAGCTA 57.444 29.630 0.00 0.00 0.00 3.32
2912 3178 9.813080 CTTTATAGACAGACAAACAAAAGCTAC 57.187 33.333 0.00 0.00 0.00 3.58
2913 3179 9.555727 TTTATAGACAGACAAACAAAAGCTACT 57.444 29.630 0.00 0.00 0.00 2.57
2915 3181 6.846325 AGACAGACAAACAAAAGCTACTAC 57.154 37.500 0.00 0.00 0.00 2.73
2916 3182 6.583562 AGACAGACAAACAAAAGCTACTACT 58.416 36.000 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.322201 AGGAACAAAGGCAATATGTATGAAGG 59.678 38.462 0.00 0.00 0.00 3.46
1 2 7.067372 TCAGGAACAAAGGCAATATGTATGAAG 59.933 37.037 0.00 0.00 0.00 3.02
2 3 6.889177 TCAGGAACAAAGGCAATATGTATGAA 59.111 34.615 0.00 0.00 0.00 2.57
4 5 6.698008 TCAGGAACAAAGGCAATATGTATG 57.302 37.500 0.00 0.00 0.00 2.39
5 6 7.902920 ATTCAGGAACAAAGGCAATATGTAT 57.097 32.000 0.00 0.00 0.00 2.29
6 7 8.995027 ATATTCAGGAACAAAGGCAATATGTA 57.005 30.769 0.00 0.00 0.00 2.29
7 8 7.902920 ATATTCAGGAACAAAGGCAATATGT 57.097 32.000 0.00 0.00 0.00 2.29
8 9 9.903682 CTTATATTCAGGAACAAAGGCAATATG 57.096 33.333 0.00 0.00 0.00 1.78
11 12 7.961326 ACTTATATTCAGGAACAAAGGCAAT 57.039 32.000 0.00 0.00 0.00 3.56
37 38 9.787435 TCTAGCTTGTATTGAAACCTCTAAAAA 57.213 29.630 0.00 0.00 0.00 1.94
38 39 9.959721 ATCTAGCTTGTATTGAAACCTCTAAAA 57.040 29.630 0.00 0.00 0.00 1.52
41 42 8.861086 CCTATCTAGCTTGTATTGAAACCTCTA 58.139 37.037 0.00 0.00 0.00 2.43
42 43 7.202047 CCCTATCTAGCTTGTATTGAAACCTCT 60.202 40.741 0.00 0.00 0.00 3.69
43 44 6.931840 CCCTATCTAGCTTGTATTGAAACCTC 59.068 42.308 0.00 0.00 0.00 3.85
44 45 6.615726 TCCCTATCTAGCTTGTATTGAAACCT 59.384 38.462 0.00 0.00 0.00 3.50
45 46 6.827727 TCCCTATCTAGCTTGTATTGAAACC 58.172 40.000 0.00 0.00 0.00 3.27
46 47 7.934120 ACATCCCTATCTAGCTTGTATTGAAAC 59.066 37.037 0.00 0.00 0.00 2.78
47 48 8.034313 ACATCCCTATCTAGCTTGTATTGAAA 57.966 34.615 0.00 0.00 0.00 2.69
48 49 7.618019 ACATCCCTATCTAGCTTGTATTGAA 57.382 36.000 0.00 0.00 0.00 2.69
49 50 8.901472 ATACATCCCTATCTAGCTTGTATTGA 57.099 34.615 0.00 0.00 0.00 2.57
54 55 9.635404 GTCTATATACATCCCTATCTAGCTTGT 57.365 37.037 0.00 0.00 0.00 3.16
55 56 9.634021 TGTCTATATACATCCCTATCTAGCTTG 57.366 37.037 0.00 0.00 0.00 4.01
91 92 8.252964 ACGGAGAAAATAAAGTGAATCTACAC 57.747 34.615 0.00 0.00 40.60 2.90
92 93 8.311836 AGACGGAGAAAATAAAGTGAATCTACA 58.688 33.333 0.00 0.00 0.00 2.74
93 94 8.705048 AGACGGAGAAAATAAAGTGAATCTAC 57.295 34.615 0.00 0.00 0.00 2.59
94 95 8.750298 AGAGACGGAGAAAATAAAGTGAATCTA 58.250 33.333 0.00 0.00 0.00 1.98
95 96 7.616313 AGAGACGGAGAAAATAAAGTGAATCT 58.384 34.615 0.00 0.00 0.00 2.40
96 97 7.835634 AGAGACGGAGAAAATAAAGTGAATC 57.164 36.000 0.00 0.00 0.00 2.52
97 98 8.622948 AAAGAGACGGAGAAAATAAAGTGAAT 57.377 30.769 0.00 0.00 0.00 2.57
98 99 8.446599 AAAAGAGACGGAGAAAATAAAGTGAA 57.553 30.769 0.00 0.00 0.00 3.18
99 100 8.342634 CAAAAAGAGACGGAGAAAATAAAGTGA 58.657 33.333 0.00 0.00 0.00 3.41
100 101 7.591426 CCAAAAAGAGACGGAGAAAATAAAGTG 59.409 37.037 0.00 0.00 0.00 3.16
101 102 7.501225 TCCAAAAAGAGACGGAGAAAATAAAGT 59.499 33.333 0.00 0.00 0.00 2.66
102 103 7.871853 TCCAAAAAGAGACGGAGAAAATAAAG 58.128 34.615 0.00 0.00 0.00 1.85
103 104 7.811117 TCCAAAAAGAGACGGAGAAAATAAA 57.189 32.000 0.00 0.00 0.00 1.40
104 105 7.811117 TTCCAAAAAGAGACGGAGAAAATAA 57.189 32.000 0.00 0.00 0.00 1.40
105 106 7.883311 AGATTCCAAAAAGAGACGGAGAAAATA 59.117 33.333 0.00 0.00 0.00 1.40
106 107 6.717084 AGATTCCAAAAAGAGACGGAGAAAAT 59.283 34.615 0.00 0.00 0.00 1.82
107 108 6.062095 AGATTCCAAAAAGAGACGGAGAAAA 58.938 36.000 0.00 0.00 0.00 2.29
108 109 5.621193 AGATTCCAAAAAGAGACGGAGAAA 58.379 37.500 0.00 0.00 0.00 2.52
109 110 5.012148 AGAGATTCCAAAAAGAGACGGAGAA 59.988 40.000 0.00 0.00 0.00 2.87
110 111 4.528596 AGAGATTCCAAAAAGAGACGGAGA 59.471 41.667 0.00 0.00 0.00 3.71
111 112 4.826556 AGAGATTCCAAAAAGAGACGGAG 58.173 43.478 0.00 0.00 0.00 4.63
112 113 4.891992 AGAGATTCCAAAAAGAGACGGA 57.108 40.909 0.00 0.00 0.00 4.69
113 114 7.361286 CCTTTTAGAGATTCCAAAAAGAGACGG 60.361 40.741 13.30 0.00 39.97 4.79
114 115 7.387948 TCCTTTTAGAGATTCCAAAAAGAGACG 59.612 37.037 13.30 0.00 39.97 4.18
115 116 8.622948 TCCTTTTAGAGATTCCAAAAAGAGAC 57.377 34.615 13.30 0.00 39.97 3.36
116 117 9.813826 ATTCCTTTTAGAGATTCCAAAAAGAGA 57.186 29.630 13.30 8.59 39.97 3.10
132 133 9.783256 CCCGTTTCTAAATGTAATTCCTTTTAG 57.217 33.333 9.04 9.04 33.67 1.85
133 134 9.517868 TCCCGTTTCTAAATGTAATTCCTTTTA 57.482 29.630 0.00 0.00 33.67 1.52
134 135 8.411991 TCCCGTTTCTAAATGTAATTCCTTTT 57.588 30.769 0.00 0.00 33.67 2.27
135 136 7.122204 CCTCCCGTTTCTAAATGTAATTCCTTT 59.878 37.037 0.00 0.00 33.67 3.11
136 137 6.602009 CCTCCCGTTTCTAAATGTAATTCCTT 59.398 38.462 0.00 0.00 33.67 3.36
137 138 6.120220 CCTCCCGTTTCTAAATGTAATTCCT 58.880 40.000 0.00 0.00 33.67 3.36
138 139 5.298527 CCCTCCCGTTTCTAAATGTAATTCC 59.701 44.000 0.00 0.00 33.67 3.01
139 140 5.298527 CCCCTCCCGTTTCTAAATGTAATTC 59.701 44.000 0.00 0.00 33.67 2.17
140 141 5.198207 CCCCTCCCGTTTCTAAATGTAATT 58.802 41.667 0.00 0.00 38.98 1.40
141 142 4.228895 ACCCCTCCCGTTTCTAAATGTAAT 59.771 41.667 0.00 0.00 0.00 1.89
142 143 3.588396 ACCCCTCCCGTTTCTAAATGTAA 59.412 43.478 0.00 0.00 0.00 2.41
143 144 3.183801 ACCCCTCCCGTTTCTAAATGTA 58.816 45.455 0.00 0.00 0.00 2.29
144 145 1.990327 ACCCCTCCCGTTTCTAAATGT 59.010 47.619 0.00 0.00 0.00 2.71
145 146 2.801077 ACCCCTCCCGTTTCTAAATG 57.199 50.000 0.00 0.00 0.00 2.32
146 147 3.457836 ACTACCCCTCCCGTTTCTAAAT 58.542 45.455 0.00 0.00 0.00 1.40
147 148 2.906568 ACTACCCCTCCCGTTTCTAAA 58.093 47.619 0.00 0.00 0.00 1.85
148 149 2.629017 ACTACCCCTCCCGTTTCTAA 57.371 50.000 0.00 0.00 0.00 2.10
149 150 2.043526 AGAACTACCCCTCCCGTTTCTA 59.956 50.000 0.00 0.00 0.00 2.10
150 151 1.203275 AGAACTACCCCTCCCGTTTCT 60.203 52.381 0.00 0.00 0.00 2.52
151 152 1.273759 AGAACTACCCCTCCCGTTTC 58.726 55.000 0.00 0.00 0.00 2.78
152 153 2.629017 TAGAACTACCCCTCCCGTTT 57.371 50.000 0.00 0.00 0.00 3.60
153 154 2.629017 TTAGAACTACCCCTCCCGTT 57.371 50.000 0.00 0.00 0.00 4.44
154 155 2.629017 TTTAGAACTACCCCTCCCGT 57.371 50.000 0.00 0.00 0.00 5.28
155 156 2.367894 GGATTTAGAACTACCCCTCCCG 59.632 54.545 0.00 0.00 0.00 5.14
156 157 3.390819 TGGATTTAGAACTACCCCTCCC 58.609 50.000 0.00 0.00 0.00 4.30
157 158 5.648330 AATGGATTTAGAACTACCCCTCC 57.352 43.478 0.00 0.00 0.00 4.30
158 159 5.299531 GCAAATGGATTTAGAACTACCCCTC 59.700 44.000 0.00 0.00 0.00 4.30
159 160 5.201243 GCAAATGGATTTAGAACTACCCCT 58.799 41.667 0.00 0.00 0.00 4.79
160 161 4.953579 TGCAAATGGATTTAGAACTACCCC 59.046 41.667 0.00 0.00 0.00 4.95
161 162 6.715347 ATGCAAATGGATTTAGAACTACCC 57.285 37.500 0.00 0.00 0.00 3.69
162 163 7.771183 TGAATGCAAATGGATTTAGAACTACC 58.229 34.615 1.60 0.00 36.19 3.18
163 164 7.433425 GCTGAATGCAAATGGATTTAGAACTAC 59.567 37.037 18.98 2.39 40.29 2.73
164 165 7.340232 AGCTGAATGCAAATGGATTTAGAACTA 59.660 33.333 18.98 0.00 40.29 2.24
165 166 6.154021 AGCTGAATGCAAATGGATTTAGAACT 59.846 34.615 18.98 8.08 40.29 3.01
166 167 6.255020 CAGCTGAATGCAAATGGATTTAGAAC 59.745 38.462 18.98 6.37 40.29 3.01
167 168 6.334989 CAGCTGAATGCAAATGGATTTAGAA 58.665 36.000 18.98 0.43 40.29 2.10
168 169 5.680408 GCAGCTGAATGCAAATGGATTTAGA 60.680 40.000 20.43 0.97 45.77 2.10
169 170 4.506654 GCAGCTGAATGCAAATGGATTTAG 59.493 41.667 20.43 12.91 45.77 1.85
215 216 0.681175 CAAGTTTCCTTTGCCCCCAG 59.319 55.000 0.00 0.00 0.00 4.45
216 217 0.762461 CCAAGTTTCCTTTGCCCCCA 60.762 55.000 0.00 0.00 0.00 4.96
217 218 1.480212 CCCAAGTTTCCTTTGCCCCC 61.480 60.000 0.00 0.00 0.00 5.40
218 219 0.762842 ACCCAAGTTTCCTTTGCCCC 60.763 55.000 0.00 0.00 0.00 5.80
239 350 1.662876 CCAAGTTGCATGAACCGAACG 60.663 52.381 0.00 0.00 34.80 3.95
269 380 9.627395 TGTCTCTCGTTTTTGAAAAATGTTTTA 57.373 25.926 18.80 2.93 0.00 1.52
274 385 7.698130 ACTTCTGTCTCTCGTTTTTGAAAAATG 59.302 33.333 14.71 14.71 0.00 2.32
275 386 7.762382 ACTTCTGTCTCTCGTTTTTGAAAAAT 58.238 30.769 6.35 0.00 0.00 1.82
281 392 7.361127 TCTACTACTTCTGTCTCTCGTTTTTG 58.639 38.462 0.00 0.00 0.00 2.44
289 400 8.107095 AGTTTCATCTCTACTACTTCTGTCTCT 58.893 37.037 0.00 0.00 0.00 3.10
300 411 6.324254 GGGGCTTTCTAGTTTCATCTCTACTA 59.676 42.308 0.00 0.00 0.00 1.82
374 485 1.164041 CGTCTCCCGCCACTTGTTTT 61.164 55.000 0.00 0.00 0.00 2.43
408 519 2.805353 CGCCGTGTCTCTTGTCGG 60.805 66.667 0.00 0.00 44.86 4.79
424 535 4.632153 TCTTTTCTTTTCTCTCCCTGTCG 58.368 43.478 0.00 0.00 0.00 4.35
439 569 4.200092 AGAGTTGCGACCTTTTCTTTTCT 58.800 39.130 0.00 0.00 0.00 2.52
451 581 2.430382 TTCGGTGGGAGAGTTGCGAC 62.430 60.000 0.00 0.00 0.00 5.19
452 582 1.541310 ATTCGGTGGGAGAGTTGCGA 61.541 55.000 0.00 0.00 0.00 5.10
453 583 0.174845 TATTCGGTGGGAGAGTTGCG 59.825 55.000 0.00 0.00 0.00 4.85
468 600 0.944311 ATGGCGACGGATGCGTATTC 60.944 55.000 13.76 5.51 0.00 1.75
503 635 1.815421 CGTGAAGATTGAGGCCGGG 60.815 63.158 2.18 0.00 0.00 5.73
506 638 1.464997 GAACACGTGAAGATTGAGGCC 59.535 52.381 25.01 0.00 0.00 5.19
507 639 2.417719 AGAACACGTGAAGATTGAGGC 58.582 47.619 25.01 0.00 0.00 4.70
577 724 1.212455 GGCCGCTTGGTTTGTTTTCG 61.212 55.000 0.00 0.00 34.16 3.46
578 725 0.179097 TGGCCGCTTGGTTTGTTTTC 60.179 50.000 0.00 0.00 34.16 2.29
936 1091 1.688772 GCGGGATGTGAGGTAGTCTA 58.311 55.000 0.00 0.00 0.00 2.59
937 1092 1.043673 GGCGGGATGTGAGGTAGTCT 61.044 60.000 0.00 0.00 0.00 3.24
938 1093 1.442148 GGCGGGATGTGAGGTAGTC 59.558 63.158 0.00 0.00 0.00 2.59
939 1094 2.064581 GGGCGGGATGTGAGGTAGT 61.065 63.158 0.00 0.00 0.00 2.73
940 1095 2.808206 GGGGCGGGATGTGAGGTAG 61.808 68.421 0.00 0.00 0.00 3.18
973 1128 1.302033 GGCTGTGGTGACTCTGTGG 60.302 63.158 0.00 0.00 0.00 4.17
992 1147 2.437359 AAGATGGAGCTGCGGTGC 60.437 61.111 0.00 0.00 0.00 5.01
1000 1155 0.741221 GACGGTGGTGAAGATGGAGC 60.741 60.000 0.00 0.00 0.00 4.70
1003 1158 1.656652 GATGACGGTGGTGAAGATGG 58.343 55.000 0.00 0.00 0.00 3.51
1072 1228 2.473235 GCAACACTTGTTCTCTCGTCTC 59.527 50.000 0.00 0.00 35.83 3.36
1073 1229 2.474816 GCAACACTTGTTCTCTCGTCT 58.525 47.619 0.00 0.00 35.83 4.18
1074 1230 1.527311 GGCAACACTTGTTCTCTCGTC 59.473 52.381 0.00 0.00 35.83 4.20
1075 1231 1.134521 TGGCAACACTTGTTCTCTCGT 60.135 47.619 0.00 0.00 46.17 4.18
1076 1232 1.581934 TGGCAACACTTGTTCTCTCG 58.418 50.000 0.00 0.00 46.17 4.04
1104 1260 1.684386 CTCCGGCTCTTGCTCTCCAT 61.684 60.000 0.00 0.00 39.59 3.41
1469 1655 0.108424 CGAAGAACCTCTGCAGGGAG 60.108 60.000 17.43 7.93 45.53 4.30
1472 1658 0.891373 TCTCGAAGAACCTCTGCAGG 59.109 55.000 15.13 1.31 46.87 4.85
1558 1747 2.182030 CCGACTTGTCCTCCGAGC 59.818 66.667 0.00 0.00 0.00 5.03
1668 1869 1.139734 GATGTCTTGAGGCGAGCGA 59.860 57.895 0.00 0.00 0.00 4.93
1673 1874 1.148310 ACAAACGATGTCTTGAGGCG 58.852 50.000 0.00 0.00 37.96 5.52
1674 1875 3.585862 TCTACAAACGATGTCTTGAGGC 58.414 45.455 2.03 0.00 42.70 4.70
1675 1876 3.614616 GCTCTACAAACGATGTCTTGAGG 59.385 47.826 16.44 0.00 42.70 3.86
1676 1877 4.090642 GTGCTCTACAAACGATGTCTTGAG 59.909 45.833 2.03 9.38 42.70 3.02
1683 1884 4.990543 TGAAAGTGCTCTACAAACGATG 57.009 40.909 0.00 0.00 0.00 3.84
1740 1941 8.895932 TCTTGTTTCTTTCTTTCTTTCTTTCG 57.104 30.769 0.00 0.00 0.00 3.46
1752 1953 8.510505 GCTATGAACTCAATCTTGTTTCTTTCT 58.489 33.333 7.85 0.00 0.00 2.52
1753 1954 8.292448 TGCTATGAACTCAATCTTGTTTCTTTC 58.708 33.333 0.00 0.00 0.00 2.62
1756 1957 7.574592 GCTTGCTATGAACTCAATCTTGTTTCT 60.575 37.037 0.00 0.00 0.00 2.52
1778 1982 1.069906 CGAACGAACAAAGAGGGCTTG 60.070 52.381 0.00 0.00 33.79 4.01
1786 1990 6.396454 CGATCAAATCAAACGAACGAACAAAG 60.396 38.462 0.14 0.00 0.00 2.77
1793 1997 4.047553 TGTCGATCAAATCAAACGAACG 57.952 40.909 0.00 0.00 34.91 3.95
1808 2012 6.306356 CGCAGAAATCAAAAGAATTTGTCGAT 59.694 34.615 0.00 0.00 45.02 3.59
1810 2014 5.663773 GCGCAGAAATCAAAAGAATTTGTCG 60.664 40.000 0.30 0.00 45.02 4.35
1844 2048 0.387239 GTTTCTGTGCGAACCATGGC 60.387 55.000 13.04 0.00 0.00 4.40
1845 2049 0.240945 GGTTTCTGTGCGAACCATGG 59.759 55.000 11.19 11.19 0.00 3.66
1856 2060 3.644966 TGAACTGAACTGGGTTTCTGT 57.355 42.857 0.00 0.00 38.80 3.41
1886 2094 8.230486 AGCACTCGTCTTTATTTCAAGTTATTG 58.770 33.333 0.00 0.00 37.80 1.90
1906 2114 2.494059 TGTTTGAAGCTGGTAGCACTC 58.506 47.619 3.43 0.44 45.56 3.51
1910 2118 1.663161 GCGTTGTTTGAAGCTGGTAGC 60.663 52.381 0.00 0.00 42.84 3.58
1915 2127 1.334869 AGGAAGCGTTGTTTGAAGCTG 59.665 47.619 0.00 0.00 40.17 4.24
1938 2150 0.391661 GTGGTCGTGATGCCAGACAT 60.392 55.000 0.00 0.00 43.54 3.06
1940 2152 2.094659 CGTGGTCGTGATGCCAGAC 61.095 63.158 0.00 0.00 35.14 3.51
1943 2155 1.245376 TAGTCGTGGTCGTGATGCCA 61.245 55.000 0.00 0.00 38.33 4.92
1947 2159 0.170561 GTGCTAGTCGTGGTCGTGAT 59.829 55.000 0.00 0.00 38.33 3.06
1952 2164 0.809385 TAGCTGTGCTAGTCGTGGTC 59.191 55.000 0.00 0.00 40.44 4.02
1955 2167 0.446616 TCGTAGCTGTGCTAGTCGTG 59.553 55.000 0.00 0.00 42.11 4.35
1956 2168 1.380524 ATCGTAGCTGTGCTAGTCGT 58.619 50.000 0.00 0.00 42.11 4.34
1957 2169 2.476873 AATCGTAGCTGTGCTAGTCG 57.523 50.000 0.00 1.96 42.11 4.18
1958 2170 3.066342 TGGTAATCGTAGCTGTGCTAGTC 59.934 47.826 0.00 0.00 42.11 2.59
1961 2173 3.889538 AGATGGTAATCGTAGCTGTGCTA 59.110 43.478 0.00 0.00 37.73 3.49
1962 2174 2.695666 AGATGGTAATCGTAGCTGTGCT 59.304 45.455 0.00 0.00 39.13 4.40
1963 2175 3.099267 AGATGGTAATCGTAGCTGTGC 57.901 47.619 0.00 0.00 37.92 4.57
1964 2176 4.682787 TCAAGATGGTAATCGTAGCTGTG 58.317 43.478 0.00 0.00 37.92 3.66
1965 2177 4.402793 ACTCAAGATGGTAATCGTAGCTGT 59.597 41.667 0.00 0.00 37.92 4.40
1969 2181 6.057627 ACGTACTCAAGATGGTAATCGTAG 57.942 41.667 0.00 0.00 37.92 3.51
1970 2182 7.578852 CATACGTACTCAAGATGGTAATCGTA 58.421 38.462 0.00 0.00 37.92 3.43
1971 2183 4.978083 ACGTACTCAAGATGGTAATCGT 57.022 40.909 0.00 0.00 37.92 3.73
1972 2184 5.342525 GCATACGTACTCAAGATGGTAATCG 59.657 44.000 0.00 0.00 37.92 3.34
1973 2185 5.634020 GGCATACGTACTCAAGATGGTAATC 59.366 44.000 0.00 0.00 0.00 1.75
1974 2186 5.069914 TGGCATACGTACTCAAGATGGTAAT 59.930 40.000 0.00 0.00 0.00 1.89
1975 2187 4.403113 TGGCATACGTACTCAAGATGGTAA 59.597 41.667 0.00 0.00 0.00 2.85
1976 2188 3.955551 TGGCATACGTACTCAAGATGGTA 59.044 43.478 0.00 0.00 0.00 3.25
1977 2189 2.764010 TGGCATACGTACTCAAGATGGT 59.236 45.455 0.00 0.00 0.00 3.55
1978 2190 3.452755 TGGCATACGTACTCAAGATGG 57.547 47.619 0.00 0.00 0.00 3.51
1979 2191 4.620982 TCATGGCATACGTACTCAAGATG 58.379 43.478 0.00 0.00 0.00 2.90
1980 2192 4.937201 TCATGGCATACGTACTCAAGAT 57.063 40.909 0.00 0.00 0.00 2.40
1981 2193 4.262036 GGATCATGGCATACGTACTCAAGA 60.262 45.833 0.00 0.00 0.00 3.02
1982 2194 3.990469 GGATCATGGCATACGTACTCAAG 59.010 47.826 0.00 0.00 0.00 3.02
1983 2195 3.244078 GGGATCATGGCATACGTACTCAA 60.244 47.826 0.00 0.00 0.00 3.02
1984 2196 2.299013 GGGATCATGGCATACGTACTCA 59.701 50.000 0.00 0.00 0.00 3.41
1985 2197 2.299013 TGGGATCATGGCATACGTACTC 59.701 50.000 0.00 0.00 0.00 2.59
1986 2198 2.325484 TGGGATCATGGCATACGTACT 58.675 47.619 0.00 0.00 0.00 2.73
1987 2199 2.831685 TGGGATCATGGCATACGTAC 57.168 50.000 0.00 0.00 0.00 3.67
1988 2200 3.333029 CATGGGATCATGGCATACGTA 57.667 47.619 0.00 0.00 45.19 3.57
1989 2201 2.189594 CATGGGATCATGGCATACGT 57.810 50.000 0.00 0.00 45.19 3.57
1998 2210 3.885297 GACATTTCGGTTCATGGGATCAT 59.115 43.478 0.00 0.00 0.00 2.45
1999 2211 3.278574 GACATTTCGGTTCATGGGATCA 58.721 45.455 0.00 0.00 0.00 2.92
2000 2212 3.278574 TGACATTTCGGTTCATGGGATC 58.721 45.455 0.00 0.00 0.00 3.36
2001 2213 3.364460 TGACATTTCGGTTCATGGGAT 57.636 42.857 0.00 0.00 0.00 3.85
2002 2214 2.869101 TGACATTTCGGTTCATGGGA 57.131 45.000 0.00 0.00 0.00 4.37
2003 2215 2.164219 CCTTGACATTTCGGTTCATGGG 59.836 50.000 0.00 0.00 0.00 4.00
2024 2236 3.348119 GAACTGGAGATGGGTTTCTTCC 58.652 50.000 0.00 0.00 0.00 3.46
2025 2237 3.003480 CGAACTGGAGATGGGTTTCTTC 58.997 50.000 0.00 0.00 0.00 2.87
2034 2259 0.674581 TGCTTGCCGAACTGGAGATG 60.675 55.000 0.00 0.00 42.00 2.90
2038 2263 2.664851 CGTGCTTGCCGAACTGGA 60.665 61.111 0.00 0.00 42.00 3.86
2042 2267 1.204312 GAACTCGTGCTTGCCGAAC 59.796 57.895 7.37 0.00 33.34 3.95
2043 2268 0.602638 ATGAACTCGTGCTTGCCGAA 60.603 50.000 7.37 0.00 33.34 4.30
2045 2270 1.133253 CATGAACTCGTGCTTGCCG 59.867 57.895 0.00 0.00 0.00 5.69
2054 2279 2.202932 CCCTCCGCCATGAACTCG 60.203 66.667 0.00 0.00 0.00 4.18
2055 2280 2.190578 CCCCTCCGCCATGAACTC 59.809 66.667 0.00 0.00 0.00 3.01
2066 2292 4.040198 ACCCTTCCCCTCCCCTCC 62.040 72.222 0.00 0.00 0.00 4.30
2067 2293 2.692741 CACCCTTCCCCTCCCCTC 60.693 72.222 0.00 0.00 0.00 4.30
2068 2294 4.371231 CCACCCTTCCCCTCCCCT 62.371 72.222 0.00 0.00 0.00 4.79
2070 2296 4.695791 ACCCACCCTTCCCCTCCC 62.696 72.222 0.00 0.00 0.00 4.30
2142 2377 2.261671 CGTCCAAGTCTCCCACCG 59.738 66.667 0.00 0.00 0.00 4.94
2190 2425 5.198274 GCGCCATTTCTTCGTTATTCTAAG 58.802 41.667 0.00 0.00 0.00 2.18
2201 2440 0.237235 TGAACGTGCGCCATTTCTTC 59.763 50.000 4.18 0.00 0.00 2.87
2202 2441 0.881118 ATGAACGTGCGCCATTTCTT 59.119 45.000 4.18 0.00 0.00 2.52
2203 2442 0.168788 CATGAACGTGCGCCATTTCT 59.831 50.000 4.18 0.00 0.00 2.52
2230 2469 1.595093 CGAGCAATGGTTGTTCCCCC 61.595 60.000 1.78 0.00 37.58 5.40
2232 2471 1.883021 CCGAGCAATGGTTGTTCCC 59.117 57.895 0.00 0.00 37.58 3.97
2233 2472 1.212751 GCCGAGCAATGGTTGTTCC 59.787 57.895 0.00 0.00 37.58 3.62
2234 2473 1.212751 GGCCGAGCAATGGTTGTTC 59.787 57.895 0.00 0.00 37.51 3.18
2241 2480 3.880846 GCGAAGGGCCGAGCAATG 61.881 66.667 14.31 0.00 34.80 2.82
2242 2481 4.101448 AGCGAAGGGCCGAGCAAT 62.101 61.111 19.64 1.25 45.17 3.56
2243 2482 4.760047 GAGCGAAGGGCCGAGCAA 62.760 66.667 19.64 0.00 45.17 3.91
2245 2484 4.882396 GAGAGCGAAGGGCCGAGC 62.882 72.222 11.91 11.91 45.17 5.03
2246 2485 4.560856 CGAGAGCGAAGGGCCGAG 62.561 72.222 0.00 0.00 45.17 4.63
2407 2673 3.188786 GGTCGGATCAGCACACGC 61.189 66.667 0.00 0.00 38.99 5.34
2410 2676 2.279810 TTCGGGTCGGATCAGCACA 61.280 57.895 0.00 0.00 0.00 4.57
2414 2680 1.516386 CACGTTCGGGTCGGATCAG 60.516 63.158 0.00 0.00 0.00 2.90
2415 2681 1.972752 TCACGTTCGGGTCGGATCA 60.973 57.895 0.00 0.00 0.00 2.92
2416 2682 1.515736 GTCACGTTCGGGTCGGATC 60.516 63.158 0.00 0.00 0.00 3.36
2417 2683 2.209064 CTGTCACGTTCGGGTCGGAT 62.209 60.000 0.00 0.00 0.00 4.18
2418 2684 2.906388 TGTCACGTTCGGGTCGGA 60.906 61.111 0.00 0.00 0.00 4.55
2419 2685 2.430244 CTGTCACGTTCGGGTCGG 60.430 66.667 0.00 0.00 0.00 4.79
2420 2686 3.103911 GCTGTCACGTTCGGGTCG 61.104 66.667 0.00 0.00 0.00 4.79
2421 2687 3.103911 CGCTGTCACGTTCGGGTC 61.104 66.667 0.00 0.00 0.00 4.46
2423 2689 4.351938 TCCGCTGTCACGTTCGGG 62.352 66.667 9.17 0.00 41.98 5.14
2425 2691 2.805353 CCTCCGCTGTCACGTTCG 60.805 66.667 0.00 0.00 0.00 3.95
2430 2696 3.691744 CTCGCTCCTCCGCTGTCAC 62.692 68.421 0.00 0.00 0.00 3.67
2431 2697 3.443925 CTCGCTCCTCCGCTGTCA 61.444 66.667 0.00 0.00 0.00 3.58
2432 2698 3.444805 ACTCGCTCCTCCGCTGTC 61.445 66.667 0.00 0.00 0.00 3.51
2433 2699 3.753434 CACTCGCTCCTCCGCTGT 61.753 66.667 0.00 0.00 0.00 4.40
2434 2700 3.753434 ACACTCGCTCCTCCGCTG 61.753 66.667 0.00 0.00 0.00 5.18
2435 2701 3.753434 CACACTCGCTCCTCCGCT 61.753 66.667 0.00 0.00 0.00 5.52
2436 2702 4.803426 CCACACTCGCTCCTCCGC 62.803 72.222 0.00 0.00 0.00 5.54
2437 2703 3.062466 TCCACACTCGCTCCTCCG 61.062 66.667 0.00 0.00 0.00 4.63
2438 2704 2.574399 GTCCACACTCGCTCCTCC 59.426 66.667 0.00 0.00 0.00 4.30
2439 2705 2.179517 CGTCCACACTCGCTCCTC 59.820 66.667 0.00 0.00 0.00 3.71
2440 2706 3.374402 CCGTCCACACTCGCTCCT 61.374 66.667 0.00 0.00 0.00 3.69
2441 2707 4.436998 CCCGTCCACACTCGCTCC 62.437 72.222 0.00 0.00 0.00 4.70
2442 2708 4.436998 CCCCGTCCACACTCGCTC 62.437 72.222 0.00 0.00 0.00 5.03
2461 2727 4.034258 CATCCATGGATGCCGCGC 62.034 66.667 35.69 0.00 44.27 6.86
2485 2751 2.031420 GCAAAGTAAACCACTCCGTTCC 60.031 50.000 0.00 0.00 36.04 3.62
2486 2752 2.349155 CGCAAAGTAAACCACTCCGTTC 60.349 50.000 0.00 0.00 36.04 3.95
2491 2757 0.240145 GGGCGCAAAGTAAACCACTC 59.760 55.000 10.83 0.00 36.04 3.51
2492 2758 0.179001 AGGGCGCAAAGTAAACCACT 60.179 50.000 10.83 0.00 40.05 4.00
2493 2759 0.039527 CAGGGCGCAAAGTAAACCAC 60.040 55.000 10.83 0.00 0.00 4.16
2495 2761 1.080772 GCAGGGCGCAAAGTAAACC 60.081 57.895 10.83 0.00 41.79 3.27
2496 2762 4.552278 GCAGGGCGCAAAGTAAAC 57.448 55.556 10.83 0.00 41.79 2.01
2518 2784 3.946126 GAAAGCACCTCCAGCCCCC 62.946 68.421 0.00 0.00 0.00 5.40
2580 2846 2.459442 GCAGACAGAGCGCATCACC 61.459 63.158 11.47 0.00 0.00 4.02
2583 2849 2.894387 GGGCAGACAGAGCGCATC 60.894 66.667 11.47 4.24 43.54 3.91
2584 2850 4.479993 GGGGCAGACAGAGCGCAT 62.480 66.667 11.47 0.00 45.58 4.73
2641 2907 0.609662 CGGTTCCTTCCTTCCCGTTA 59.390 55.000 0.00 0.00 34.10 3.18
2648 2914 0.185175 AAGCAACCGGTTCCTTCCTT 59.815 50.000 18.04 11.74 0.00 3.36
2675 2941 3.642705 CGAAAAAGGGGAGCTTTTCAAG 58.357 45.455 7.01 0.00 40.16 3.02
2676 2942 2.223947 GCGAAAAAGGGGAGCTTTTCAA 60.224 45.455 7.01 0.00 40.16 2.69
2688 2954 0.240145 GTCCGGAAAGGCGAAAAAGG 59.760 55.000 5.23 0.00 40.77 3.11
2689 2955 0.110373 CGTCCGGAAAGGCGAAAAAG 60.110 55.000 5.23 0.00 40.35 2.27
2713 2979 1.461897 CGAACTAAAAACGTGGCGGAT 59.538 47.619 0.00 0.00 0.00 4.18
2739 3005 2.663188 GATCAGATCCGGCGTGGC 60.663 66.667 6.01 0.00 37.80 5.01
2744 3010 2.653702 CCCTCGATCAGATCCGGC 59.346 66.667 4.73 0.00 0.00 6.13
2745 3011 1.228583 TCCCCTCGATCAGATCCGG 60.229 63.158 4.73 0.00 0.00 5.14
2755 3021 1.671742 GACAGCAAAGTCCCCTCGA 59.328 57.895 0.00 0.00 32.36 4.04
2756 3022 4.285851 GACAGCAAAGTCCCCTCG 57.714 61.111 0.00 0.00 32.36 4.63
2762 3028 2.328099 CGCCCAGGACAGCAAAGTC 61.328 63.158 0.00 0.00 37.80 3.01
2763 3029 2.281761 CGCCCAGGACAGCAAAGT 60.282 61.111 0.00 0.00 0.00 2.66
2764 3030 2.032528 TCGCCCAGGACAGCAAAG 59.967 61.111 0.00 0.00 0.00 2.77
2765 3031 1.476845 TAGTCGCCCAGGACAGCAAA 61.477 55.000 0.00 0.00 39.42 3.68
2766 3032 1.476845 TTAGTCGCCCAGGACAGCAA 61.477 55.000 0.00 0.00 39.42 3.91
2767 3033 1.264749 ATTAGTCGCCCAGGACAGCA 61.265 55.000 0.00 0.00 39.42 4.41
2768 3034 0.530870 GATTAGTCGCCCAGGACAGC 60.531 60.000 0.00 0.00 39.42 4.40
2769 3035 1.115467 AGATTAGTCGCCCAGGACAG 58.885 55.000 0.00 0.00 39.42 3.51
2770 3036 1.568504 AAGATTAGTCGCCCAGGACA 58.431 50.000 0.00 0.00 39.42 4.02
2771 3037 2.693267 AAAGATTAGTCGCCCAGGAC 57.307 50.000 0.00 0.00 37.19 3.85
2772 3038 3.773119 ACTAAAAGATTAGTCGCCCAGGA 59.227 43.478 0.00 0.00 46.97 3.86
2773 3039 4.138487 ACTAAAAGATTAGTCGCCCAGG 57.862 45.455 0.00 0.00 46.97 4.45
2774 3040 5.903810 AGTACTAAAAGATTAGTCGCCCAG 58.096 41.667 4.62 0.00 46.97 4.45
2775 3041 5.927281 AGTACTAAAAGATTAGTCGCCCA 57.073 39.130 4.62 0.00 46.97 5.36
2776 3042 7.606858 AAAAGTACTAAAAGATTAGTCGCCC 57.393 36.000 0.00 0.00 46.97 6.13
2795 3061 8.612145 ACACCACTAGATTCCCTATTAAAAAGT 58.388 33.333 0.00 0.00 0.00 2.66
2796 3062 9.462606 AACACCACTAGATTCCCTATTAAAAAG 57.537 33.333 0.00 0.00 0.00 2.27
2797 3063 9.238368 CAACACCACTAGATTCCCTATTAAAAA 57.762 33.333 0.00 0.00 0.00 1.94
2798 3064 7.832187 CCAACACCACTAGATTCCCTATTAAAA 59.168 37.037 0.00 0.00 0.00 1.52
2799 3065 7.037153 ACCAACACCACTAGATTCCCTATTAAA 60.037 37.037 0.00 0.00 0.00 1.52
2800 3066 6.445786 ACCAACACCACTAGATTCCCTATTAA 59.554 38.462 0.00 0.00 0.00 1.40
2801 3067 5.968167 ACCAACACCACTAGATTCCCTATTA 59.032 40.000 0.00 0.00 0.00 0.98
2802 3068 4.788617 ACCAACACCACTAGATTCCCTATT 59.211 41.667 0.00 0.00 0.00 1.73
2803 3069 4.164221 CACCAACACCACTAGATTCCCTAT 59.836 45.833 0.00 0.00 0.00 2.57
2804 3070 3.517901 CACCAACACCACTAGATTCCCTA 59.482 47.826 0.00 0.00 0.00 3.53
2805 3071 2.305927 CACCAACACCACTAGATTCCCT 59.694 50.000 0.00 0.00 0.00 4.20
2806 3072 2.618045 CCACCAACACCACTAGATTCCC 60.618 54.545 0.00 0.00 0.00 3.97
2807 3073 2.039879 ACCACCAACACCACTAGATTCC 59.960 50.000 0.00 0.00 0.00 3.01
2808 3074 3.074412 CACCACCAACACCACTAGATTC 58.926 50.000 0.00 0.00 0.00 2.52
2809 3075 2.224769 CCACCACCAACACCACTAGATT 60.225 50.000 0.00 0.00 0.00 2.40
2810 3076 1.351017 CCACCACCAACACCACTAGAT 59.649 52.381 0.00 0.00 0.00 1.98
2811 3077 0.762418 CCACCACCAACACCACTAGA 59.238 55.000 0.00 0.00 0.00 2.43
2812 3078 0.889186 GCCACCACCAACACCACTAG 60.889 60.000 0.00 0.00 0.00 2.57
2813 3079 1.149627 GCCACCACCAACACCACTA 59.850 57.895 0.00 0.00 0.00 2.74
2814 3080 2.123897 GCCACCACCAACACCACT 60.124 61.111 0.00 0.00 0.00 4.00
2815 3081 3.591835 CGCCACCACCAACACCAC 61.592 66.667 0.00 0.00 0.00 4.16
2816 3082 3.765894 CTCGCCACCACCAACACCA 62.766 63.158 0.00 0.00 0.00 4.17
2817 3083 2.978010 CTCGCCACCACCAACACC 60.978 66.667 0.00 0.00 0.00 4.16
2818 3084 3.660111 GCTCGCCACCACCAACAC 61.660 66.667 0.00 0.00 0.00 3.32
2819 3085 3.872603 AGCTCGCCACCACCAACA 61.873 61.111 0.00 0.00 0.00 3.33
2820 3086 3.357079 CAGCTCGCCACCACCAAC 61.357 66.667 0.00 0.00 0.00 3.77
2821 3087 4.641645 CCAGCTCGCCACCACCAA 62.642 66.667 0.00 0.00 0.00 3.67
2840 3106 3.037833 GCAAAGCGGGCAAACAGC 61.038 61.111 0.00 0.00 44.65 4.40
2841 3107 1.372128 GAGCAAAGCGGGCAAACAG 60.372 57.895 0.00 0.00 0.00 3.16
2842 3108 2.727544 GAGCAAAGCGGGCAAACA 59.272 55.556 0.00 0.00 0.00 2.83
2843 3109 2.049156 GGAGCAAAGCGGGCAAAC 60.049 61.111 0.00 0.00 0.00 2.93
2844 3110 3.302344 GGGAGCAAAGCGGGCAAA 61.302 61.111 0.00 0.00 0.00 3.68
2861 3127 2.765807 ACGATCTCAGCCCAGGGG 60.766 66.667 7.91 3.48 38.57 4.79
2862 3128 1.903877 AACACGATCTCAGCCCAGGG 61.904 60.000 0.00 0.00 0.00 4.45
2863 3129 0.036010 AAACACGATCTCAGCCCAGG 60.036 55.000 0.00 0.00 0.00 4.45
2864 3130 2.166459 TCTAAACACGATCTCAGCCCAG 59.834 50.000 0.00 0.00 0.00 4.45
2865 3131 2.094182 GTCTAAACACGATCTCAGCCCA 60.094 50.000 0.00 0.00 0.00 5.36
2866 3132 2.166664 AGTCTAAACACGATCTCAGCCC 59.833 50.000 0.00 0.00 0.00 5.19
2867 3133 3.512033 AGTCTAAACACGATCTCAGCC 57.488 47.619 0.00 0.00 0.00 4.85
2868 3134 8.129840 TCTATAAAGTCTAAACACGATCTCAGC 58.870 37.037 0.00 0.00 0.00 4.26
2869 3135 9.440784 GTCTATAAAGTCTAAACACGATCTCAG 57.559 37.037 0.00 0.00 0.00 3.35
2870 3136 8.953313 TGTCTATAAAGTCTAAACACGATCTCA 58.047 33.333 0.00 0.00 0.00 3.27
2871 3137 9.440784 CTGTCTATAAAGTCTAAACACGATCTC 57.559 37.037 0.00 0.00 0.00 2.75
2872 3138 9.175312 TCTGTCTATAAAGTCTAAACACGATCT 57.825 33.333 0.00 0.00 0.00 2.75
2873 3139 9.224058 GTCTGTCTATAAAGTCTAAACACGATC 57.776 37.037 0.00 0.00 0.00 3.69
2874 3140 8.737175 TGTCTGTCTATAAAGTCTAAACACGAT 58.263 33.333 0.00 0.00 0.00 3.73
2875 3141 8.102800 TGTCTGTCTATAAAGTCTAAACACGA 57.897 34.615 0.00 0.00 0.00 4.35
2876 3142 8.738199 TTGTCTGTCTATAAAGTCTAAACACG 57.262 34.615 0.00 0.00 0.00 4.49
2883 3149 8.560374 GCTTTTGTTTGTCTGTCTATAAAGTCT 58.440 33.333 0.00 0.00 0.00 3.24
2884 3150 8.560374 AGCTTTTGTTTGTCTGTCTATAAAGTC 58.440 33.333 0.00 0.00 0.00 3.01
2885 3151 8.451908 AGCTTTTGTTTGTCTGTCTATAAAGT 57.548 30.769 0.00 0.00 0.00 2.66
2886 3152 9.813080 GTAGCTTTTGTTTGTCTGTCTATAAAG 57.187 33.333 0.00 0.00 0.00 1.85
2887 3153 9.555727 AGTAGCTTTTGTTTGTCTGTCTATAAA 57.444 29.630 0.00 0.00 0.00 1.40
2889 3155 9.635520 GTAGTAGCTTTTGTTTGTCTGTCTATA 57.364 33.333 0.00 0.00 0.00 1.31
2890 3156 8.368668 AGTAGTAGCTTTTGTTTGTCTGTCTAT 58.631 33.333 0.00 0.00 0.00 1.98
2891 3157 7.723324 AGTAGTAGCTTTTGTTTGTCTGTCTA 58.277 34.615 0.00 0.00 0.00 2.59
2892 3158 6.583562 AGTAGTAGCTTTTGTTTGTCTGTCT 58.416 36.000 0.00 0.00 0.00 3.41
2893 3159 6.846325 AGTAGTAGCTTTTGTTTGTCTGTC 57.154 37.500 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.