Multiple sequence alignment - TraesCS3D01G518300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G518300 chr3D 100.000 2246 0 0 1 2246 601224977 601222732 0.000000e+00 4148
1 TraesCS3D01G518300 chr3A 91.465 949 60 10 1263 2210 731259371 731260299 0.000000e+00 1284
2 TraesCS3D01G518300 chr3A 91.376 545 32 8 517 1060 731218248 731218778 0.000000e+00 732
3 TraesCS3D01G518300 chr3A 94.340 106 6 0 1145 1250 731229442 731229547 1.780000e-36 163
4 TraesCS3D01G518300 chr1D 74.654 939 216 20 1290 2219 433954479 433955404 1.620000e-106 396
5 TraesCS3D01G518300 chr5D 76.190 504 98 14 1744 2245 536880982 536880499 1.720000e-61 246
6 TraesCS3D01G518300 chr5D 80.455 220 36 6 1010 1227 536881749 536881535 6.420000e-36 161
7 TraesCS3D01G518300 chr5B 73.008 778 180 19 1473 2245 677639703 677640455 1.720000e-61 246
8 TraesCS3D01G518300 chr5B 81.778 225 36 5 1010 1231 677639188 677639410 1.370000e-42 183
9 TraesCS3D01G518300 chr3B 79.464 336 48 13 1080 1409 808624985 808624665 3.760000e-53 219
10 TraesCS3D01G518300 chr4A 74.941 423 99 5 1473 1894 633068146 633068562 1.060000e-43 187
11 TraesCS3D01G518300 chr4A 80.930 215 37 4 1015 1227 633067662 633067874 1.380000e-37 167


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G518300 chr3D 601222732 601224977 2245 True 4148.0 4148 100.0000 1 2246 1 chr3D.!!$R1 2245
1 TraesCS3D01G518300 chr3A 731259371 731260299 928 False 1284.0 1284 91.4650 1263 2210 1 chr3A.!!$F3 947
2 TraesCS3D01G518300 chr3A 731218248 731218778 530 False 732.0 732 91.3760 517 1060 1 chr3A.!!$F1 543
3 TraesCS3D01G518300 chr1D 433954479 433955404 925 False 396.0 396 74.6540 1290 2219 1 chr1D.!!$F1 929
4 TraesCS3D01G518300 chr5D 536880499 536881749 1250 True 203.5 246 78.3225 1010 2245 2 chr5D.!!$R1 1235
5 TraesCS3D01G518300 chr5B 677639188 677640455 1267 False 214.5 246 77.3930 1010 2245 2 chr5B.!!$F1 1235

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
105 106 0.030504 TTCTGCGTGCATTTGTGGTG 59.969 50.0 0.0 0.0 0.00 4.17 F
193 194 0.036306 AGTAGGGGGCAACAAAGTCG 59.964 55.0 0.0 0.0 39.74 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1107 1108 0.038310 AAGTAAGCACCAGGAAGCCC 59.962 55.000 0.0 0.0 0.0 5.19 R
1565 1689 1.008815 AGTCCATCATCCTCACTCCCA 59.991 52.381 0.0 0.0 0.0 4.37 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 8.933807 GGACTCTACAACAAGGTTAATTCTAAC 58.066 37.037 0.00 0.00 37.30 2.34
27 28 9.485206 GACTCTACAACAAGGTTAATTCTAACA 57.515 33.333 0.00 0.00 39.43 2.41
28 29 9.490379 ACTCTACAACAAGGTTAATTCTAACAG 57.510 33.333 0.00 0.00 39.43 3.16
29 30 9.706691 CTCTACAACAAGGTTAATTCTAACAGA 57.293 33.333 0.00 0.00 39.43 3.41
30 31 9.706691 TCTACAACAAGGTTAATTCTAACAGAG 57.293 33.333 0.00 0.00 39.43 3.35
31 32 9.706691 CTACAACAAGGTTAATTCTAACAGAGA 57.293 33.333 0.00 0.00 39.43 3.10
33 34 9.220767 ACAACAAGGTTAATTCTAACAGAGATC 57.779 33.333 0.00 0.00 39.43 2.75
34 35 9.442047 CAACAAGGTTAATTCTAACAGAGATCT 57.558 33.333 0.00 0.00 39.43 2.75
35 36 9.660180 AACAAGGTTAATTCTAACAGAGATCTC 57.340 33.333 15.29 15.29 39.43 2.75
36 37 9.041354 ACAAGGTTAATTCTAACAGAGATCTCT 57.959 33.333 19.92 19.92 39.43 3.10
37 38 9.883142 CAAGGTTAATTCTAACAGAGATCTCTT 57.117 33.333 22.95 12.13 39.43 2.85
39 40 9.261035 AGGTTAATTCTAACAGAGATCTCTTCA 57.739 33.333 22.95 9.66 39.43 3.02
40 41 9.877178 GGTTAATTCTAACAGAGATCTCTTCAA 57.123 33.333 22.95 10.97 39.43 2.69
44 45 6.429791 TCTAACAGAGATCTCTTCAACTCG 57.570 41.667 22.95 11.97 37.98 4.18
45 46 6.174049 TCTAACAGAGATCTCTTCAACTCGA 58.826 40.000 22.95 9.94 37.98 4.04
46 47 5.913137 AACAGAGATCTCTTCAACTCGAT 57.087 39.130 22.95 1.86 37.98 3.59
47 48 7.988028 TCTAACAGAGATCTCTTCAACTCGATA 59.012 37.037 22.95 7.92 37.98 2.92
48 49 7.397892 AACAGAGATCTCTTCAACTCGATAA 57.602 36.000 22.95 0.00 37.98 1.75
49 50 7.397892 ACAGAGATCTCTTCAACTCGATAAA 57.602 36.000 22.95 0.00 37.98 1.40
50 51 7.831753 ACAGAGATCTCTTCAACTCGATAAAA 58.168 34.615 22.95 0.00 37.98 1.52
51 52 8.307483 ACAGAGATCTCTTCAACTCGATAAAAA 58.693 33.333 22.95 0.00 37.98 1.94
73 74 4.870221 AAATCGTTTACGGTGATTAGCC 57.130 40.909 2.09 0.00 40.29 3.93
74 75 3.814005 ATCGTTTACGGTGATTAGCCT 57.186 42.857 2.09 0.00 40.29 4.58
75 76 3.155093 TCGTTTACGGTGATTAGCCTC 57.845 47.619 2.09 0.00 40.29 4.70
76 77 2.756760 TCGTTTACGGTGATTAGCCTCT 59.243 45.455 2.09 0.00 40.29 3.69
77 78 3.114065 CGTTTACGGTGATTAGCCTCTC 58.886 50.000 0.00 0.00 35.37 3.20
78 79 3.428452 CGTTTACGGTGATTAGCCTCTCA 60.428 47.826 0.00 0.00 35.37 3.27
79 80 4.501071 GTTTACGGTGATTAGCCTCTCAA 58.499 43.478 0.00 0.00 0.00 3.02
80 81 5.116882 GTTTACGGTGATTAGCCTCTCAAT 58.883 41.667 0.00 0.00 0.00 2.57
81 82 3.460857 ACGGTGATTAGCCTCTCAATC 57.539 47.619 0.00 0.00 0.00 2.67
82 83 3.034635 ACGGTGATTAGCCTCTCAATCT 58.965 45.455 0.00 0.00 33.26 2.40
83 84 3.452627 ACGGTGATTAGCCTCTCAATCTT 59.547 43.478 0.00 0.00 33.26 2.40
84 85 3.806521 CGGTGATTAGCCTCTCAATCTTG 59.193 47.826 0.00 0.00 33.26 3.02
85 86 4.442052 CGGTGATTAGCCTCTCAATCTTGA 60.442 45.833 0.00 0.00 33.26 3.02
86 87 5.619220 GGTGATTAGCCTCTCAATCTTGAT 58.381 41.667 0.00 0.00 36.46 2.57
87 88 6.060788 GGTGATTAGCCTCTCAATCTTGATT 58.939 40.000 0.00 0.00 36.46 2.57
88 89 6.204495 GGTGATTAGCCTCTCAATCTTGATTC 59.796 42.308 0.00 0.00 36.46 2.52
89 90 6.991531 GTGATTAGCCTCTCAATCTTGATTCT 59.008 38.462 0.00 0.00 36.46 2.40
90 91 6.990939 TGATTAGCCTCTCAATCTTGATTCTG 59.009 38.462 0.00 0.00 36.46 3.02
91 92 3.543665 AGCCTCTCAATCTTGATTCTGC 58.456 45.455 0.00 0.00 36.46 4.26
92 93 2.287373 GCCTCTCAATCTTGATTCTGCG 59.713 50.000 0.00 0.00 36.46 5.18
93 94 3.529533 CCTCTCAATCTTGATTCTGCGT 58.470 45.455 0.00 0.00 36.46 5.24
94 95 3.309138 CCTCTCAATCTTGATTCTGCGTG 59.691 47.826 0.00 0.00 36.46 5.34
95 96 2.674852 TCTCAATCTTGATTCTGCGTGC 59.325 45.455 0.00 0.00 36.46 5.34
96 97 2.417586 CTCAATCTTGATTCTGCGTGCA 59.582 45.455 0.00 0.00 36.46 4.57
97 98 3.011818 TCAATCTTGATTCTGCGTGCAT 58.988 40.909 0.00 0.00 31.01 3.96
98 99 3.441222 TCAATCTTGATTCTGCGTGCATT 59.559 39.130 0.00 0.00 31.01 3.56
99 100 4.082625 TCAATCTTGATTCTGCGTGCATTT 60.083 37.500 0.00 0.00 31.01 2.32
100 101 3.206034 TCTTGATTCTGCGTGCATTTG 57.794 42.857 0.00 0.00 0.00 2.32
101 102 2.553602 TCTTGATTCTGCGTGCATTTGT 59.446 40.909 0.00 0.00 0.00 2.83
102 103 2.334971 TGATTCTGCGTGCATTTGTG 57.665 45.000 0.00 0.00 0.00 3.33
103 104 1.068402 TGATTCTGCGTGCATTTGTGG 60.068 47.619 0.00 0.00 0.00 4.17
104 105 0.961019 ATTCTGCGTGCATTTGTGGT 59.039 45.000 0.00 0.00 0.00 4.16
105 106 0.030504 TTCTGCGTGCATTTGTGGTG 59.969 50.000 0.00 0.00 0.00 4.17
106 107 1.372004 CTGCGTGCATTTGTGGTGG 60.372 57.895 0.00 0.00 0.00 4.61
107 108 2.074230 CTGCGTGCATTTGTGGTGGT 62.074 55.000 0.00 0.00 0.00 4.16
108 109 0.819666 TGCGTGCATTTGTGGTGGTA 60.820 50.000 0.00 0.00 0.00 3.25
109 110 0.109781 GCGTGCATTTGTGGTGGTAG 60.110 55.000 0.00 0.00 0.00 3.18
110 111 1.518325 CGTGCATTTGTGGTGGTAGA 58.482 50.000 0.00 0.00 0.00 2.59
111 112 2.083774 CGTGCATTTGTGGTGGTAGAT 58.916 47.619 0.00 0.00 0.00 1.98
112 113 2.159531 CGTGCATTTGTGGTGGTAGATG 60.160 50.000 0.00 0.00 0.00 2.90
113 114 2.164219 GTGCATTTGTGGTGGTAGATGG 59.836 50.000 0.00 0.00 0.00 3.51
114 115 2.040947 TGCATTTGTGGTGGTAGATGGA 59.959 45.455 0.00 0.00 0.00 3.41
115 116 3.088532 GCATTTGTGGTGGTAGATGGAA 58.911 45.455 0.00 0.00 0.00 3.53
116 117 3.509575 GCATTTGTGGTGGTAGATGGAAA 59.490 43.478 0.00 0.00 0.00 3.13
117 118 4.618227 GCATTTGTGGTGGTAGATGGAAAC 60.618 45.833 0.00 0.00 0.00 2.78
118 119 2.465860 TGTGGTGGTAGATGGAAACG 57.534 50.000 0.00 0.00 0.00 3.60
119 120 1.002659 TGTGGTGGTAGATGGAAACGG 59.997 52.381 0.00 0.00 0.00 4.44
120 121 0.616371 TGGTGGTAGATGGAAACGGG 59.384 55.000 0.00 0.00 0.00 5.28
121 122 0.616891 GGTGGTAGATGGAAACGGGT 59.383 55.000 0.00 0.00 0.00 5.28
122 123 1.677820 GGTGGTAGATGGAAACGGGTG 60.678 57.143 0.00 0.00 0.00 4.61
123 124 0.616371 TGGTAGATGGAAACGGGTGG 59.384 55.000 0.00 0.00 0.00 4.61
124 125 0.746923 GGTAGATGGAAACGGGTGGC 60.747 60.000 0.00 0.00 0.00 5.01
125 126 0.746923 GTAGATGGAAACGGGTGGCC 60.747 60.000 0.00 0.00 0.00 5.36
126 127 2.246761 TAGATGGAAACGGGTGGCCG 62.247 60.000 0.00 0.00 39.31 6.13
143 144 4.719616 GCGTTGACTGGCGCGAAC 62.720 66.667 12.10 2.61 44.13 3.95
144 145 4.072088 CGTTGACTGGCGCGAACC 62.072 66.667 12.10 2.07 0.00 3.62
145 146 4.072088 GTTGACTGGCGCGAACCG 62.072 66.667 12.10 0.00 40.75 4.44
156 157 4.096003 CGAACCGGGCCATCAGGT 62.096 66.667 6.32 5.22 45.92 4.00
159 160 2.035626 ACCGGGCCATCAGGTTTG 59.964 61.111 6.32 0.00 41.17 2.93
160 161 2.354729 CCGGGCCATCAGGTTTGA 59.645 61.111 4.39 0.00 37.81 2.69
161 162 1.750399 CCGGGCCATCAGGTTTGAG 60.750 63.158 4.39 0.00 36.61 3.02
162 163 1.002134 CGGGCCATCAGGTTTGAGT 60.002 57.895 4.39 0.00 36.61 3.41
163 164 0.609131 CGGGCCATCAGGTTTGAGTT 60.609 55.000 4.39 0.00 36.61 3.01
164 165 1.177401 GGGCCATCAGGTTTGAGTTC 58.823 55.000 4.39 0.00 36.61 3.01
165 166 1.547675 GGGCCATCAGGTTTGAGTTCA 60.548 52.381 4.39 0.00 36.61 3.18
166 167 1.815003 GGCCATCAGGTTTGAGTTCAG 59.185 52.381 0.00 0.00 36.61 3.02
167 168 2.553028 GGCCATCAGGTTTGAGTTCAGA 60.553 50.000 0.00 0.00 36.61 3.27
168 169 3.149196 GCCATCAGGTTTGAGTTCAGAA 58.851 45.455 0.00 0.00 36.61 3.02
169 170 3.569701 GCCATCAGGTTTGAGTTCAGAAA 59.430 43.478 0.00 0.00 36.61 2.52
170 171 4.037923 GCCATCAGGTTTGAGTTCAGAAAA 59.962 41.667 0.00 0.00 36.61 2.29
171 172 5.766222 CCATCAGGTTTGAGTTCAGAAAAG 58.234 41.667 0.00 0.00 36.61 2.27
172 173 5.532406 CCATCAGGTTTGAGTTCAGAAAAGA 59.468 40.000 0.00 0.00 36.61 2.52
173 174 6.433766 CATCAGGTTTGAGTTCAGAAAAGAC 58.566 40.000 0.00 0.00 36.61 3.01
174 175 5.496556 TCAGGTTTGAGTTCAGAAAAGACA 58.503 37.500 0.00 0.00 0.00 3.41
175 176 5.586243 TCAGGTTTGAGTTCAGAAAAGACAG 59.414 40.000 0.00 0.00 0.00 3.51
176 177 5.355350 CAGGTTTGAGTTCAGAAAAGACAGT 59.645 40.000 0.00 0.00 0.00 3.55
177 178 6.538742 CAGGTTTGAGTTCAGAAAAGACAGTA 59.461 38.462 0.00 0.00 0.00 2.74
178 179 6.763610 AGGTTTGAGTTCAGAAAAGACAGTAG 59.236 38.462 0.00 0.00 0.00 2.57
179 180 6.017852 GGTTTGAGTTCAGAAAAGACAGTAGG 60.018 42.308 0.00 0.00 0.00 3.18
180 181 5.215252 TGAGTTCAGAAAAGACAGTAGGG 57.785 43.478 0.00 0.00 0.00 3.53
181 182 4.040461 TGAGTTCAGAAAAGACAGTAGGGG 59.960 45.833 0.00 0.00 0.00 4.79
182 183 3.328050 AGTTCAGAAAAGACAGTAGGGGG 59.672 47.826 0.00 0.00 0.00 5.40
183 184 1.628846 TCAGAAAAGACAGTAGGGGGC 59.371 52.381 0.00 0.00 0.00 5.80
184 185 1.351017 CAGAAAAGACAGTAGGGGGCA 59.649 52.381 0.00 0.00 0.00 5.36
185 186 2.062636 AGAAAAGACAGTAGGGGGCAA 58.937 47.619 0.00 0.00 0.00 4.52
186 187 2.160205 GAAAAGACAGTAGGGGGCAAC 58.840 52.381 0.00 0.00 0.00 4.17
187 188 1.145571 AAAGACAGTAGGGGGCAACA 58.854 50.000 0.00 0.00 39.74 3.33
188 189 1.145571 AAGACAGTAGGGGGCAACAA 58.854 50.000 0.00 0.00 39.74 2.83
189 190 1.145571 AGACAGTAGGGGGCAACAAA 58.854 50.000 0.00 0.00 39.74 2.83
190 191 1.073923 AGACAGTAGGGGGCAACAAAG 59.926 52.381 0.00 0.00 39.74 2.77
191 192 0.850784 ACAGTAGGGGGCAACAAAGT 59.149 50.000 0.00 0.00 39.74 2.66
192 193 1.202891 ACAGTAGGGGGCAACAAAGTC 60.203 52.381 0.00 0.00 39.74 3.01
193 194 0.036306 AGTAGGGGGCAACAAAGTCG 59.964 55.000 0.00 0.00 39.74 4.18
194 195 0.250597 GTAGGGGGCAACAAAGTCGT 60.251 55.000 0.00 0.00 39.74 4.34
195 196 0.250553 TAGGGGGCAACAAAGTCGTG 60.251 55.000 0.00 0.00 39.74 4.35
196 197 2.335011 GGGGCAACAAAGTCGTGC 59.665 61.111 0.00 0.00 39.74 5.34
197 198 2.193536 GGGGCAACAAAGTCGTGCT 61.194 57.895 0.00 0.00 39.74 4.40
198 199 1.733526 GGGCAACAAAGTCGTGCTT 59.266 52.632 0.00 0.00 39.52 3.91
199 200 0.317854 GGGCAACAAAGTCGTGCTTC 60.318 55.000 0.00 0.00 36.17 3.86
200 201 0.663153 GGCAACAAAGTCGTGCTTCT 59.337 50.000 0.00 0.00 36.17 2.85
201 202 1.597937 GGCAACAAAGTCGTGCTTCTG 60.598 52.381 0.00 1.43 36.17 3.02
202 203 1.330521 GCAACAAAGTCGTGCTTCTGA 59.669 47.619 0.00 0.00 36.17 3.27
203 204 2.223249 GCAACAAAGTCGTGCTTCTGAA 60.223 45.455 0.00 0.00 36.17 3.02
204 205 3.730662 GCAACAAAGTCGTGCTTCTGAAA 60.731 43.478 0.00 0.00 36.17 2.69
205 206 4.601019 CAACAAAGTCGTGCTTCTGAAAT 58.399 39.130 0.00 0.00 36.17 2.17
206 207 5.747565 CAACAAAGTCGTGCTTCTGAAATA 58.252 37.500 0.00 0.00 36.17 1.40
207 208 5.344207 ACAAAGTCGTGCTTCTGAAATAC 57.656 39.130 0.00 0.00 36.17 1.89
208 209 5.057149 ACAAAGTCGTGCTTCTGAAATACT 58.943 37.500 0.00 0.00 36.17 2.12
209 210 5.177696 ACAAAGTCGTGCTTCTGAAATACTC 59.822 40.000 0.00 0.00 36.17 2.59
210 211 3.851098 AGTCGTGCTTCTGAAATACTCC 58.149 45.455 0.00 0.00 0.00 3.85
211 212 2.930682 GTCGTGCTTCTGAAATACTCCC 59.069 50.000 0.00 0.00 0.00 4.30
212 213 2.832129 TCGTGCTTCTGAAATACTCCCT 59.168 45.455 0.00 0.00 0.00 4.20
213 214 3.119101 TCGTGCTTCTGAAATACTCCCTC 60.119 47.826 0.00 0.00 0.00 4.30
214 215 3.118956 CGTGCTTCTGAAATACTCCCTCT 60.119 47.826 0.00 0.00 0.00 3.69
215 216 4.438148 GTGCTTCTGAAATACTCCCTCTC 58.562 47.826 0.00 0.00 0.00 3.20
216 217 4.161377 GTGCTTCTGAAATACTCCCTCTCT 59.839 45.833 0.00 0.00 0.00 3.10
217 218 4.404073 TGCTTCTGAAATACTCCCTCTCTC 59.596 45.833 0.00 0.00 0.00 3.20
218 219 4.202212 GCTTCTGAAATACTCCCTCTCTCC 60.202 50.000 0.00 0.00 0.00 3.71
219 220 3.556999 TCTGAAATACTCCCTCTCTCCG 58.443 50.000 0.00 0.00 0.00 4.63
220 221 3.053544 TCTGAAATACTCCCTCTCTCCGT 60.054 47.826 0.00 0.00 0.00 4.69
221 222 4.165565 TCTGAAATACTCCCTCTCTCCGTA 59.834 45.833 0.00 0.00 0.00 4.02
222 223 4.863548 TGAAATACTCCCTCTCTCCGTAA 58.136 43.478 0.00 0.00 0.00 3.18
223 224 5.266788 TGAAATACTCCCTCTCTCCGTAAA 58.733 41.667 0.00 0.00 0.00 2.01
224 225 5.360144 TGAAATACTCCCTCTCTCCGTAAAG 59.640 44.000 0.00 0.00 0.00 1.85
225 226 4.792513 ATACTCCCTCTCTCCGTAAAGA 57.207 45.455 0.00 0.00 0.00 2.52
226 227 3.453059 ACTCCCTCTCTCCGTAAAGAA 57.547 47.619 0.00 0.00 0.00 2.52
227 228 3.775910 ACTCCCTCTCTCCGTAAAGAAA 58.224 45.455 0.00 0.00 0.00 2.52
228 229 4.354662 ACTCCCTCTCTCCGTAAAGAAAT 58.645 43.478 0.00 0.00 0.00 2.17
229 230 5.516984 ACTCCCTCTCTCCGTAAAGAAATA 58.483 41.667 0.00 0.00 0.00 1.40
230 231 6.137559 ACTCCCTCTCTCCGTAAAGAAATAT 58.862 40.000 0.00 0.00 0.00 1.28
231 232 7.296098 ACTCCCTCTCTCCGTAAAGAAATATA 58.704 38.462 0.00 0.00 0.00 0.86
232 233 7.783596 ACTCCCTCTCTCCGTAAAGAAATATAA 59.216 37.037 0.00 0.00 0.00 0.98
233 234 8.179509 TCCCTCTCTCCGTAAAGAAATATAAG 57.820 38.462 0.00 0.00 0.00 1.73
234 235 6.869388 CCCTCTCTCCGTAAAGAAATATAAGC 59.131 42.308 0.00 0.00 0.00 3.09
235 236 7.256012 CCCTCTCTCCGTAAAGAAATATAAGCT 60.256 40.741 0.00 0.00 0.00 3.74
236 237 8.145122 CCTCTCTCCGTAAAGAAATATAAGCTT 58.855 37.037 3.48 3.48 0.00 3.74
306 307 9.685828 TTTTTGGAATTTCTACACTTATTTCGG 57.314 29.630 0.00 0.00 0.00 4.30
307 308 6.995511 TGGAATTTCTACACTTATTTCGGG 57.004 37.500 0.00 0.00 0.00 5.14
308 309 6.713276 TGGAATTTCTACACTTATTTCGGGA 58.287 36.000 0.00 0.00 0.00 5.14
309 310 7.343357 TGGAATTTCTACACTTATTTCGGGAT 58.657 34.615 0.00 0.00 0.00 3.85
310 311 7.282224 TGGAATTTCTACACTTATTTCGGGATG 59.718 37.037 0.00 0.00 0.00 3.51
311 312 7.255139 GGAATTTCTACACTTATTTCGGGATGG 60.255 40.741 0.00 0.00 0.00 3.51
312 313 5.943349 TTCTACACTTATTTCGGGATGGA 57.057 39.130 0.00 0.00 0.00 3.41
313 314 5.531122 TCTACACTTATTTCGGGATGGAG 57.469 43.478 0.00 0.00 0.00 3.86
314 315 3.560636 ACACTTATTTCGGGATGGAGG 57.439 47.619 0.00 0.00 0.00 4.30
315 316 2.172717 ACACTTATTTCGGGATGGAGGG 59.827 50.000 0.00 0.00 0.00 4.30
316 317 2.438021 CACTTATTTCGGGATGGAGGGA 59.562 50.000 0.00 0.00 0.00 4.20
317 318 2.706190 ACTTATTTCGGGATGGAGGGAG 59.294 50.000 0.00 0.00 0.00 4.30
318 319 2.489528 TATTTCGGGATGGAGGGAGT 57.510 50.000 0.00 0.00 0.00 3.85
319 320 2.489528 ATTTCGGGATGGAGGGAGTA 57.510 50.000 0.00 0.00 0.00 2.59
320 321 2.257391 TTTCGGGATGGAGGGAGTAA 57.743 50.000 0.00 0.00 0.00 2.24
321 322 2.489528 TTCGGGATGGAGGGAGTAAT 57.510 50.000 0.00 0.00 0.00 1.89
322 323 3.623466 TTCGGGATGGAGGGAGTAATA 57.377 47.619 0.00 0.00 0.00 0.98
323 324 2.885616 TCGGGATGGAGGGAGTAATAC 58.114 52.381 0.00 0.00 0.00 1.89
324 325 2.178325 TCGGGATGGAGGGAGTAATACA 59.822 50.000 0.00 0.00 0.00 2.29
325 326 3.173965 CGGGATGGAGGGAGTAATACAT 58.826 50.000 0.00 0.00 0.00 2.29
326 327 4.044952 TCGGGATGGAGGGAGTAATACATA 59.955 45.833 0.00 0.00 0.00 2.29
327 328 4.775780 CGGGATGGAGGGAGTAATACATAA 59.224 45.833 0.00 0.00 0.00 1.90
328 329 5.247564 CGGGATGGAGGGAGTAATACATAAA 59.752 44.000 0.00 0.00 0.00 1.40
329 330 6.239772 CGGGATGGAGGGAGTAATACATAAAA 60.240 42.308 0.00 0.00 0.00 1.52
330 331 7.523415 GGGATGGAGGGAGTAATACATAAAAA 58.477 38.462 0.00 0.00 0.00 1.94
331 332 8.170730 GGGATGGAGGGAGTAATACATAAAAAT 58.829 37.037 0.00 0.00 0.00 1.82
344 345 7.996098 ATACATAAAAATATTCCCTCCACGG 57.004 36.000 0.00 0.00 0.00 4.94
345 346 6.008696 ACATAAAAATATTCCCTCCACGGA 57.991 37.500 0.00 0.00 33.16 4.69
346 347 6.428295 ACATAAAAATATTCCCTCCACGGAA 58.572 36.000 0.00 0.00 45.87 4.30
353 354 3.343941 TTCCCTCCACGGAATTAGTTG 57.656 47.619 0.00 0.00 36.98 3.16
354 355 2.262637 TCCCTCCACGGAATTAGTTGT 58.737 47.619 0.00 0.00 33.16 3.32
355 356 2.235402 TCCCTCCACGGAATTAGTTGTC 59.765 50.000 0.00 0.00 33.16 3.18
356 357 2.027561 CCCTCCACGGAATTAGTTGTCA 60.028 50.000 0.00 0.00 33.16 3.58
357 358 3.558321 CCCTCCACGGAATTAGTTGTCAA 60.558 47.826 0.00 0.00 33.16 3.18
358 359 4.069304 CCTCCACGGAATTAGTTGTCAAA 58.931 43.478 0.00 0.00 33.16 2.69
359 360 4.083484 CCTCCACGGAATTAGTTGTCAAAC 60.083 45.833 0.00 0.00 33.46 2.93
360 361 4.452825 TCCACGGAATTAGTTGTCAAACA 58.547 39.130 0.00 0.00 38.88 2.83
361 362 4.513692 TCCACGGAATTAGTTGTCAAACAG 59.486 41.667 0.00 0.00 38.88 3.16
362 363 4.513692 CCACGGAATTAGTTGTCAAACAGA 59.486 41.667 0.00 0.00 38.88 3.41
363 364 5.181245 CCACGGAATTAGTTGTCAAACAGAT 59.819 40.000 0.00 0.00 38.88 2.90
364 365 6.079763 CACGGAATTAGTTGTCAAACAGATG 58.920 40.000 0.00 0.00 38.88 2.90
365 366 5.181245 ACGGAATTAGTTGTCAAACAGATGG 59.819 40.000 0.00 0.00 38.88 3.51
366 367 5.402398 GGAATTAGTTGTCAAACAGATGGC 58.598 41.667 0.00 0.00 38.88 4.40
367 368 5.391312 AATTAGTTGTCAAACAGATGGCC 57.609 39.130 0.00 0.00 38.88 5.36
368 369 2.363306 AGTTGTCAAACAGATGGCCA 57.637 45.000 8.56 8.56 38.88 5.36
369 370 2.665165 AGTTGTCAAACAGATGGCCAA 58.335 42.857 10.96 0.00 38.88 4.52
370 371 3.030291 AGTTGTCAAACAGATGGCCAAA 58.970 40.909 10.96 0.00 38.88 3.28
371 372 3.123050 GTTGTCAAACAGATGGCCAAAC 58.877 45.455 10.96 7.46 36.24 2.93
372 373 2.665165 TGTCAAACAGATGGCCAAACT 58.335 42.857 10.96 10.09 0.00 2.66
373 374 2.622942 TGTCAAACAGATGGCCAAACTC 59.377 45.455 10.96 2.19 0.00 3.01
374 375 2.029918 GTCAAACAGATGGCCAAACTCC 60.030 50.000 10.96 0.00 0.00 3.85
375 376 1.068333 CAAACAGATGGCCAAACTCCG 60.068 52.381 10.96 0.00 0.00 4.63
376 377 0.609131 AACAGATGGCCAAACTCCGG 60.609 55.000 10.96 0.00 0.00 5.14
377 378 1.299648 CAGATGGCCAAACTCCGGA 59.700 57.895 10.96 2.93 0.00 5.14
378 379 0.107017 CAGATGGCCAAACTCCGGAT 60.107 55.000 10.96 0.00 0.00 4.18
379 380 0.625849 AGATGGCCAAACTCCGGATT 59.374 50.000 10.96 0.00 0.00 3.01
380 381 1.005924 AGATGGCCAAACTCCGGATTT 59.994 47.619 10.96 1.73 0.00 2.17
381 382 1.134946 GATGGCCAAACTCCGGATTTG 59.865 52.381 22.29 22.29 36.90 2.32
387 388 2.504367 CAAACTCCGGATTTGGACAGT 58.496 47.619 21.84 7.07 34.11 3.55
388 389 2.185004 AACTCCGGATTTGGACAGTG 57.815 50.000 3.57 0.00 33.48 3.66
389 390 0.324943 ACTCCGGATTTGGACAGTGG 59.675 55.000 3.57 0.00 33.48 4.00
390 391 0.613260 CTCCGGATTTGGACAGTGGA 59.387 55.000 3.57 0.00 33.48 4.02
391 392 0.613260 TCCGGATTTGGACAGTGGAG 59.387 55.000 0.00 0.00 31.53 3.86
392 393 0.324943 CCGGATTTGGACAGTGGAGT 59.675 55.000 0.00 0.00 0.00 3.85
393 394 1.442769 CGGATTTGGACAGTGGAGTG 58.557 55.000 0.00 0.00 0.00 3.51
394 395 1.168714 GGATTTGGACAGTGGAGTGC 58.831 55.000 0.00 0.00 0.00 4.40
395 396 1.545428 GGATTTGGACAGTGGAGTGCA 60.545 52.381 0.00 0.00 38.11 4.57
396 397 1.808945 GATTTGGACAGTGGAGTGCAG 59.191 52.381 0.00 0.00 40.95 4.41
397 398 0.836606 TTTGGACAGTGGAGTGCAGA 59.163 50.000 0.00 0.00 40.95 4.26
398 399 0.836606 TTGGACAGTGGAGTGCAGAA 59.163 50.000 0.00 0.00 40.95 3.02
399 400 1.059098 TGGACAGTGGAGTGCAGAAT 58.941 50.000 0.00 0.00 34.80 2.40
400 401 1.002430 TGGACAGTGGAGTGCAGAATC 59.998 52.381 0.00 0.00 34.80 2.52
401 402 1.002430 GGACAGTGGAGTGCAGAATCA 59.998 52.381 0.00 0.00 0.00 2.57
402 403 2.550855 GGACAGTGGAGTGCAGAATCAA 60.551 50.000 0.00 0.00 0.00 2.57
403 404 2.481952 GACAGTGGAGTGCAGAATCAAC 59.518 50.000 0.00 0.00 0.00 3.18
404 405 2.158769 ACAGTGGAGTGCAGAATCAACA 60.159 45.455 0.00 0.00 0.00 3.33
405 406 3.079578 CAGTGGAGTGCAGAATCAACAT 58.920 45.455 0.00 0.00 0.00 2.71
406 407 3.504906 CAGTGGAGTGCAGAATCAACATT 59.495 43.478 0.00 0.00 0.00 2.71
407 408 4.022589 CAGTGGAGTGCAGAATCAACATTT 60.023 41.667 0.00 0.00 0.00 2.32
408 409 4.022589 AGTGGAGTGCAGAATCAACATTTG 60.023 41.667 0.00 0.00 0.00 2.32
409 410 3.256383 TGGAGTGCAGAATCAACATTTGG 59.744 43.478 0.00 0.00 0.00 3.28
410 411 3.507233 GGAGTGCAGAATCAACATTTGGA 59.493 43.478 0.00 0.00 0.00 3.53
411 412 4.022068 GGAGTGCAGAATCAACATTTGGAA 60.022 41.667 0.00 0.00 0.00 3.53
412 413 5.337009 GGAGTGCAGAATCAACATTTGGAAT 60.337 40.000 0.00 0.00 0.00 3.01
413 414 5.475719 AGTGCAGAATCAACATTTGGAATG 58.524 37.500 0.00 0.00 0.00 2.67
414 415 4.092383 GTGCAGAATCAACATTTGGAATGC 59.908 41.667 0.00 0.00 0.00 3.56
415 416 3.305094 GCAGAATCAACATTTGGAATGCG 59.695 43.478 0.80 0.00 0.00 4.73
416 417 3.861113 CAGAATCAACATTTGGAATGCGG 59.139 43.478 0.80 0.00 0.00 5.69
417 418 3.763360 AGAATCAACATTTGGAATGCGGA 59.237 39.130 0.80 0.16 0.00 5.54
418 419 4.403432 AGAATCAACATTTGGAATGCGGAT 59.597 37.500 0.80 2.27 0.00 4.18
419 420 4.741321 ATCAACATTTGGAATGCGGATT 57.259 36.364 0.12 0.12 0.00 3.01
420 421 4.533919 TCAACATTTGGAATGCGGATTT 57.466 36.364 2.86 0.00 0.00 2.17
421 422 4.244066 TCAACATTTGGAATGCGGATTTG 58.756 39.130 2.86 0.00 0.00 2.32
422 423 3.249986 ACATTTGGAATGCGGATTTGG 57.750 42.857 2.86 0.00 0.00 3.28
423 424 2.566724 ACATTTGGAATGCGGATTTGGT 59.433 40.909 2.86 0.00 0.00 3.67
424 425 2.739885 TTTGGAATGCGGATTTGGTG 57.260 45.000 2.86 0.00 0.00 4.17
425 426 1.916506 TTGGAATGCGGATTTGGTGA 58.083 45.000 2.86 0.00 0.00 4.02
426 427 2.142356 TGGAATGCGGATTTGGTGAT 57.858 45.000 2.86 0.00 0.00 3.06
427 428 1.750206 TGGAATGCGGATTTGGTGATG 59.250 47.619 2.86 0.00 0.00 3.07
428 429 1.750778 GGAATGCGGATTTGGTGATGT 59.249 47.619 2.86 0.00 0.00 3.06
429 430 2.166254 GGAATGCGGATTTGGTGATGTT 59.834 45.455 2.86 0.00 0.00 2.71
430 431 2.945447 ATGCGGATTTGGTGATGTTG 57.055 45.000 0.00 0.00 0.00 3.33
431 432 0.887247 TGCGGATTTGGTGATGTTGG 59.113 50.000 0.00 0.00 0.00 3.77
432 433 1.173043 GCGGATTTGGTGATGTTGGA 58.827 50.000 0.00 0.00 0.00 3.53
433 434 1.133025 GCGGATTTGGTGATGTTGGAG 59.867 52.381 0.00 0.00 0.00 3.86
434 435 1.745087 CGGATTTGGTGATGTTGGAGG 59.255 52.381 0.00 0.00 0.00 4.30
435 436 1.478105 GGATTTGGTGATGTTGGAGGC 59.522 52.381 0.00 0.00 0.00 4.70
436 437 1.478105 GATTTGGTGATGTTGGAGGCC 59.522 52.381 0.00 0.00 0.00 5.19
437 438 0.541764 TTTGGTGATGTTGGAGGCCC 60.542 55.000 0.00 0.00 0.00 5.80
438 439 1.434513 TTGGTGATGTTGGAGGCCCT 61.435 55.000 0.00 0.00 0.00 5.19
439 440 1.384191 GGTGATGTTGGAGGCCCTT 59.616 57.895 0.00 0.00 0.00 3.95
440 441 0.251787 GGTGATGTTGGAGGCCCTTT 60.252 55.000 0.00 0.00 0.00 3.11
441 442 0.890683 GTGATGTTGGAGGCCCTTTG 59.109 55.000 0.00 0.00 0.00 2.77
442 443 0.776810 TGATGTTGGAGGCCCTTTGA 59.223 50.000 0.00 0.00 0.00 2.69
443 444 1.358787 TGATGTTGGAGGCCCTTTGAT 59.641 47.619 0.00 0.00 0.00 2.57
444 445 1.753073 GATGTTGGAGGCCCTTTGATG 59.247 52.381 0.00 0.00 0.00 3.07
445 446 0.482446 TGTTGGAGGCCCTTTGATGT 59.518 50.000 0.00 0.00 0.00 3.06
446 447 1.177401 GTTGGAGGCCCTTTGATGTC 58.823 55.000 0.00 0.00 0.00 3.06
447 448 0.776810 TTGGAGGCCCTTTGATGTCA 59.223 50.000 0.00 0.00 0.00 3.58
448 449 0.329261 TGGAGGCCCTTTGATGTCAG 59.671 55.000 0.00 0.00 0.00 3.51
449 450 0.620556 GGAGGCCCTTTGATGTCAGA 59.379 55.000 0.00 0.00 0.00 3.27
450 451 1.004745 GGAGGCCCTTTGATGTCAGAA 59.995 52.381 0.00 0.00 0.00 3.02
451 452 2.363683 GAGGCCCTTTGATGTCAGAAG 58.636 52.381 0.00 0.00 0.00 2.85
452 453 1.988107 AGGCCCTTTGATGTCAGAAGA 59.012 47.619 0.00 0.00 0.00 2.87
453 454 2.579860 AGGCCCTTTGATGTCAGAAGAT 59.420 45.455 0.00 0.00 0.00 2.40
454 455 3.011032 AGGCCCTTTGATGTCAGAAGATT 59.989 43.478 0.00 0.00 0.00 2.40
455 456 4.228210 AGGCCCTTTGATGTCAGAAGATTA 59.772 41.667 0.00 0.00 0.00 1.75
456 457 5.103771 AGGCCCTTTGATGTCAGAAGATTAT 60.104 40.000 0.00 0.00 0.00 1.28
457 458 6.101734 AGGCCCTTTGATGTCAGAAGATTATA 59.898 38.462 0.00 0.00 0.00 0.98
458 459 6.944862 GGCCCTTTGATGTCAGAAGATTATAT 59.055 38.462 0.00 0.00 0.00 0.86
459 460 8.103305 GGCCCTTTGATGTCAGAAGATTATATA 58.897 37.037 0.00 0.00 0.00 0.86
460 461 9.507329 GCCCTTTGATGTCAGAAGATTATATAA 57.493 33.333 0.00 0.00 0.00 0.98
465 466 9.494271 TTGATGTCAGAAGATTATATAAGCCAC 57.506 33.333 7.11 2.50 0.00 5.01
466 467 7.814587 TGATGTCAGAAGATTATATAAGCCACG 59.185 37.037 7.11 0.00 0.00 4.94
467 468 5.926542 TGTCAGAAGATTATATAAGCCACGC 59.073 40.000 7.11 0.00 0.00 5.34
468 469 5.926542 GTCAGAAGATTATATAAGCCACGCA 59.073 40.000 7.11 0.00 0.00 5.24
469 470 6.591834 GTCAGAAGATTATATAAGCCACGCAT 59.408 38.462 7.11 0.00 0.00 4.73
470 471 7.759886 GTCAGAAGATTATATAAGCCACGCATA 59.240 37.037 7.11 0.00 0.00 3.14
471 472 7.976175 TCAGAAGATTATATAAGCCACGCATAG 59.024 37.037 7.11 0.00 0.00 2.23
472 473 7.223582 CAGAAGATTATATAAGCCACGCATAGG 59.776 40.741 7.11 0.00 0.00 2.57
473 474 6.546428 AGATTATATAAGCCACGCATAGGT 57.454 37.500 7.11 0.00 0.00 3.08
474 475 6.341316 AGATTATATAAGCCACGCATAGGTG 58.659 40.000 7.11 0.00 37.66 4.00
475 476 5.731957 TTATATAAGCCACGCATAGGTGA 57.268 39.130 0.00 0.00 40.38 4.02
476 477 4.617253 ATATAAGCCACGCATAGGTGAA 57.383 40.909 0.00 0.00 40.38 3.18
477 478 2.309528 TAAGCCACGCATAGGTGAAG 57.690 50.000 0.00 0.00 40.38 3.02
478 479 0.392998 AAGCCACGCATAGGTGAAGG 60.393 55.000 0.00 0.00 40.38 3.46
479 480 1.819632 GCCACGCATAGGTGAAGGG 60.820 63.158 0.00 0.00 40.38 3.95
480 481 1.819632 CCACGCATAGGTGAAGGGC 60.820 63.158 0.00 0.00 40.38 5.19
481 482 1.819632 CACGCATAGGTGAAGGGCC 60.820 63.158 0.00 0.00 40.38 5.80
482 483 1.995626 ACGCATAGGTGAAGGGCCT 60.996 57.895 0.00 0.00 40.00 5.19
483 484 1.524621 CGCATAGGTGAAGGGCCTG 60.525 63.158 6.92 0.00 37.54 4.85
484 485 1.152881 GCATAGGTGAAGGGCCTGG 60.153 63.158 6.92 0.00 37.54 4.45
485 486 1.635817 GCATAGGTGAAGGGCCTGGA 61.636 60.000 6.92 0.00 37.54 3.86
486 487 0.471617 CATAGGTGAAGGGCCTGGAG 59.528 60.000 6.92 0.00 37.54 3.86
487 488 0.343372 ATAGGTGAAGGGCCTGGAGA 59.657 55.000 6.92 0.00 37.54 3.71
488 489 0.325671 TAGGTGAAGGGCCTGGAGAG 60.326 60.000 6.92 0.00 37.54 3.20
489 490 2.674220 GGTGAAGGGCCTGGAGAGG 61.674 68.421 6.92 0.00 43.19 3.69
490 491 1.613630 GTGAAGGGCCTGGAGAGGA 60.614 63.158 6.92 0.00 42.93 3.71
491 492 0.985490 GTGAAGGGCCTGGAGAGGAT 60.985 60.000 6.92 0.00 42.93 3.24
492 493 0.642156 TGAAGGGCCTGGAGAGGATA 59.358 55.000 6.92 0.00 42.93 2.59
493 494 1.052617 GAAGGGCCTGGAGAGGATAC 58.947 60.000 6.92 0.00 42.93 2.24
510 511 4.455606 GGATACTGGAATAGCTTGCTTGT 58.544 43.478 0.00 0.00 0.00 3.16
511 512 4.884164 GGATACTGGAATAGCTTGCTTGTT 59.116 41.667 0.00 0.00 0.00 2.83
512 513 5.220931 GGATACTGGAATAGCTTGCTTGTTG 60.221 44.000 0.00 0.00 0.00 3.33
513 514 3.490348 ACTGGAATAGCTTGCTTGTTGT 58.510 40.909 0.00 0.00 0.00 3.32
514 515 3.891366 ACTGGAATAGCTTGCTTGTTGTT 59.109 39.130 0.00 0.00 0.00 2.83
515 516 4.022849 ACTGGAATAGCTTGCTTGTTGTTC 60.023 41.667 0.00 0.00 0.00 3.18
523 524 1.024271 TGCTTGTTGTTCAGCTGTCC 58.976 50.000 14.67 6.02 0.00 4.02
551 552 9.162764 GGCTGACTGTTGAACTATTCTTATTAA 57.837 33.333 0.00 0.00 0.00 1.40
554 555 9.917129 TGACTGTTGAACTATTCTTATTAACGA 57.083 29.630 0.00 0.00 0.00 3.85
557 558 9.968743 CTGTTGAACTATTCTTATTAACGAACC 57.031 33.333 0.00 0.00 0.00 3.62
558 559 9.715121 TGTTGAACTATTCTTATTAACGAACCT 57.285 29.630 0.00 0.00 0.00 3.50
561 562 9.932207 TGAACTATTCTTATTAACGAACCTTGA 57.068 29.630 0.00 0.00 0.00 3.02
567 568 3.757745 ATTAACGAACCTTGATTGCCG 57.242 42.857 0.00 0.00 0.00 5.69
599 600 2.817258 TCTAAACCCATTCTTTGTGCGG 59.183 45.455 0.00 0.00 0.00 5.69
615 616 5.123805 TGTGCGGACGTAAGCATATAATA 57.876 39.130 18.37 2.14 45.69 0.98
620 621 7.686938 GTGCGGACGTAAGCATATAATATTTTC 59.313 37.037 18.37 0.58 45.69 2.29
642 643 2.173356 TCCCAAGAGGCCAACATCATAG 59.827 50.000 5.01 0.00 34.51 2.23
654 655 5.449177 GCCAACATCATAGCCTTGTTAGTTC 60.449 44.000 0.00 0.00 32.57 3.01
663 664 5.695851 AGCCTTGTTAGTTCAAGTCAATG 57.304 39.130 5.86 0.00 42.01 2.82
698 699 5.749596 TTGGCGATACATATTGGACTTTG 57.250 39.130 0.00 0.00 0.00 2.77
700 701 3.058224 GGCGATACATATTGGACTTTGGC 60.058 47.826 0.00 0.00 0.00 4.52
725 726 1.537202 CTTTCCTTTGTTCCTGCTCCG 59.463 52.381 0.00 0.00 0.00 4.63
741 742 2.811317 CGCCTGGTTCAGTCGAGC 60.811 66.667 0.00 0.00 34.68 5.03
745 746 1.537135 GCCTGGTTCAGTCGAGCTATC 60.537 57.143 0.00 0.00 0.00 2.08
762 763 1.877576 ATCGTTCTGTCCTCGCAGCA 61.878 55.000 0.00 0.00 36.49 4.41
800 801 0.037303 CCACATCTTGCAGGTGAGGT 59.963 55.000 10.31 5.07 34.52 3.85
801 802 1.446907 CACATCTTGCAGGTGAGGTC 58.553 55.000 0.00 0.00 34.52 3.85
802 803 1.059098 ACATCTTGCAGGTGAGGTCA 58.941 50.000 0.00 0.00 0.00 4.02
803 804 1.421268 ACATCTTGCAGGTGAGGTCAA 59.579 47.619 0.00 0.00 0.00 3.18
804 805 2.040813 ACATCTTGCAGGTGAGGTCAAT 59.959 45.455 0.00 0.00 0.00 2.57
805 806 2.479566 TCTTGCAGGTGAGGTCAATC 57.520 50.000 0.00 0.00 0.00 2.67
806 807 1.081892 CTTGCAGGTGAGGTCAATCG 58.918 55.000 0.00 0.00 0.00 3.34
807 808 0.684535 TTGCAGGTGAGGTCAATCGA 59.315 50.000 0.00 0.00 0.00 3.59
808 809 0.904649 TGCAGGTGAGGTCAATCGAT 59.095 50.000 0.00 0.00 0.00 3.59
809 810 2.107366 TGCAGGTGAGGTCAATCGATA 58.893 47.619 0.00 0.00 0.00 2.92
810 811 2.499693 TGCAGGTGAGGTCAATCGATAA 59.500 45.455 0.00 0.00 0.00 1.75
908 909 7.093992 GTGCATGGAACTAGTATAATCCTCTC 58.906 42.308 11.68 2.95 33.02 3.20
941 942 8.122952 CGTTTATATTCACAATTTGGAGGACTC 58.877 37.037 0.78 0.00 0.00 3.36
944 945 3.485463 TCACAATTTGGAGGACTCGTT 57.515 42.857 0.78 0.00 0.00 3.85
946 947 3.138304 CACAATTTGGAGGACTCGTTGA 58.862 45.455 0.78 0.00 0.00 3.18
962 963 2.097056 CGTTGATCGAGCATGCACATAG 60.097 50.000 21.98 6.02 42.86 2.23
978 979 4.391216 GCACATAGTGATCATATGGACTGC 59.609 45.833 20.04 17.52 35.23 4.40
983 984 1.980765 TGATCATATGGACTGCCCCTC 59.019 52.381 2.13 0.00 0.00 4.30
985 986 3.181407 TGATCATATGGACTGCCCCTCTA 60.181 47.826 2.13 0.00 0.00 2.43
993 994 3.282885 GGACTGCCCCTCTATTTTTCAG 58.717 50.000 0.00 0.00 0.00 3.02
994 995 3.282885 GACTGCCCCTCTATTTTTCAGG 58.717 50.000 0.00 0.00 0.00 3.86
1080 1081 3.646162 ACAGATATGCCCTGTTTATCGGA 59.354 43.478 0.00 0.00 41.68 4.55
1096 1097 1.695114 CGGATACCTGTCCATGGCCA 61.695 60.000 8.56 8.56 38.21 5.36
1100 1101 0.839277 TACCTGTCCATGGCCATCAG 59.161 55.000 17.61 19.68 0.00 2.90
1101 1102 1.152819 CCTGTCCATGGCCATCAGG 60.153 63.158 28.38 28.38 39.41 3.86
1107 1108 1.152819 CATGGCCATCAGGGGTCTG 60.153 63.158 17.61 0.00 42.21 3.51
1110 1111 4.512914 GCCATCAGGGGTCTGGGC 62.513 72.222 0.00 0.00 39.76 5.36
1140 1141 0.032403 TTACTTGGACCACCGTCGTG 59.968 55.000 0.00 0.00 40.17 4.35
1149 1150 1.594293 CACCGTCGTGCTTCTTGGT 60.594 57.895 0.00 0.00 32.04 3.67
1152 1153 1.300620 CGTCGTGCTTCTTGGTGGA 60.301 57.895 0.00 0.00 0.00 4.02
1155 1156 1.880027 GTCGTGCTTCTTGGTGGATTT 59.120 47.619 0.00 0.00 0.00 2.17
1156 1157 1.879380 TCGTGCTTCTTGGTGGATTTG 59.121 47.619 0.00 0.00 0.00 2.32
1158 1159 2.350772 CGTGCTTCTTGGTGGATTTGTC 60.351 50.000 0.00 0.00 0.00 3.18
1159 1160 2.887152 GTGCTTCTTGGTGGATTTGTCT 59.113 45.455 0.00 0.00 0.00 3.41
1160 1161 3.057946 GTGCTTCTTGGTGGATTTGTCTC 60.058 47.826 0.00 0.00 0.00 3.36
1161 1162 3.181440 TGCTTCTTGGTGGATTTGTCTCT 60.181 43.478 0.00 0.00 0.00 3.10
1162 1163 4.041567 TGCTTCTTGGTGGATTTGTCTCTA 59.958 41.667 0.00 0.00 0.00 2.43
1163 1164 4.393371 GCTTCTTGGTGGATTTGTCTCTAC 59.607 45.833 0.00 0.00 0.00 2.59
1164 1165 5.551233 CTTCTTGGTGGATTTGTCTCTACA 58.449 41.667 0.00 0.00 0.00 2.74
1170 1171 3.681897 GTGGATTTGTCTCTACACTGCAG 59.318 47.826 13.48 13.48 34.61 4.41
1172 1173 4.180057 GGATTTGTCTCTACACTGCAGAG 58.820 47.826 23.35 16.23 40.81 3.35
1173 1174 3.667497 TTTGTCTCTACACTGCAGAGG 57.333 47.619 23.35 14.56 40.04 3.69
1176 1177 2.822561 TGTCTCTACACTGCAGAGGAAG 59.177 50.000 23.35 14.45 40.04 3.46
1179 1180 2.165437 CTCTACACTGCAGAGGAAGGAC 59.835 54.545 23.35 0.00 36.65 3.85
1215 1216 3.500448 TTCATTACCCTTGTGCAGACA 57.500 42.857 0.00 0.00 0.00 3.41
1222 1223 1.071987 CTTGTGCAGACAGCTGGGA 59.928 57.895 19.93 0.00 45.94 4.37
1232 1342 3.055530 CAGACAGCTGGGATAGTCTTGTT 60.056 47.826 19.93 0.00 39.17 2.83
1237 1347 6.485171 ACAGCTGGGATAGTCTTGTTAAAAT 58.515 36.000 19.93 0.00 0.00 1.82
1240 1350 7.756722 CAGCTGGGATAGTCTTGTTAAAATTTG 59.243 37.037 5.57 0.00 0.00 2.32
1241 1351 7.035612 GCTGGGATAGTCTTGTTAAAATTTGG 58.964 38.462 0.00 0.00 0.00 3.28
1242 1352 7.309805 GCTGGGATAGTCTTGTTAAAATTTGGT 60.310 37.037 0.00 0.00 0.00 3.67
1244 1354 8.364142 TGGGATAGTCTTGTTAAAATTTGGTTG 58.636 33.333 0.00 0.00 0.00 3.77
1245 1355 8.581578 GGGATAGTCTTGTTAAAATTTGGTTGA 58.418 33.333 0.00 0.00 0.00 3.18
1249 1359 7.500141 AGTCTTGTTAAAATTTGGTTGATGCT 58.500 30.769 0.00 0.00 0.00 3.79
1250 1360 7.653311 AGTCTTGTTAAAATTTGGTTGATGCTC 59.347 33.333 0.00 0.00 0.00 4.26
1251 1361 7.437862 GTCTTGTTAAAATTTGGTTGATGCTCA 59.562 33.333 0.00 0.00 0.00 4.26
1252 1362 7.984050 TCTTGTTAAAATTTGGTTGATGCTCAA 59.016 29.630 0.00 0.00 33.32 3.02
1322 1436 4.455877 GGAGGTACAAACAACAGGATCTTG 59.544 45.833 2.78 2.78 0.00 3.02
1334 1448 6.429385 ACAACAGGATCTTGAATGTTCTTCTC 59.571 38.462 12.40 0.00 33.76 2.87
1344 1458 7.554118 TCTTGAATGTTCTTCTCACTCAAAAGT 59.446 33.333 0.00 0.00 35.60 2.66
1398 1512 3.762407 TGGATGTTGGATATACCGTGG 57.238 47.619 0.00 0.00 42.61 4.94
1436 1550 6.237901 TCTCCAGCTTAAATTCAGCAACTTA 58.762 36.000 11.20 0.00 39.99 2.24
1447 1561 5.356882 TTCAGCAACTTAAAAGATGTCGG 57.643 39.130 0.00 0.00 32.10 4.79
1461 1575 1.890876 TGTCGGAATGGTTGTTGGAG 58.109 50.000 0.00 0.00 0.00 3.86
1469 1583 4.023193 GGAATGGTTGTTGGAGTAGTTGTG 60.023 45.833 0.00 0.00 0.00 3.33
1484 1607 8.614346 GGAGTAGTTGTGTGTTGTATTTTGTTA 58.386 33.333 0.00 0.00 0.00 2.41
1554 1678 1.748329 TTCAGTGTGGCGTCTGAGCT 61.748 55.000 0.00 0.00 40.91 4.09
1557 1681 0.898320 AGTGTGGCGTCTGAGCTAAT 59.102 50.000 0.00 0.00 37.29 1.73
1565 1689 2.297597 GCGTCTGAGCTAATGGGACTAT 59.702 50.000 0.00 0.00 0.00 2.12
1576 1700 1.015609 TGGGACTATGGGAGTGAGGA 58.984 55.000 0.00 0.00 39.06 3.71
1601 1725 1.478654 GGACTTGGAAACCTGAAGCCA 60.479 52.381 0.00 0.00 0.00 4.75
1732 1856 3.198635 GGAGGATTTGGTGATCAGAGTCA 59.801 47.826 0.00 0.00 0.00 3.41
1915 2039 3.054503 GCTGCAGACAGTGGCCAG 61.055 66.667 20.43 0.00 46.30 4.85
1999 2123 5.694006 GGCACATACTCATGAAGTATCTGAC 59.306 44.000 16.89 13.21 46.22 3.51
2000 2124 6.462207 GGCACATACTCATGAAGTATCTGACT 60.462 42.308 16.89 0.00 46.22 3.41
2102 2226 1.451936 GCATGGGGCGAGGATAGTT 59.548 57.895 0.00 0.00 0.00 2.24
2103 2227 0.685097 GCATGGGGCGAGGATAGTTA 59.315 55.000 0.00 0.00 0.00 2.24
2108 2232 1.316651 GGGCGAGGATAGTTACGAGT 58.683 55.000 0.00 0.00 0.00 4.18
2114 2238 4.149617 CGAGGATAGTTACGAGTATTGCG 58.850 47.826 0.00 0.00 0.00 4.85
2124 2248 1.338337 CGAGTATTGCGGAGGACATCT 59.662 52.381 0.00 0.00 0.00 2.90
2125 2249 2.605823 CGAGTATTGCGGAGGACATCTC 60.606 54.545 0.00 0.00 41.71 2.75
2127 2251 2.625790 AGTATTGCGGAGGACATCTCTC 59.374 50.000 0.00 0.00 42.10 3.20
2135 2259 2.693074 GGAGGACATCTCTCTGGAAGAC 59.307 54.545 0.00 0.00 37.36 3.01
2173 2297 5.712446 TCTTCTACATATCTTCCCTCATCGG 59.288 44.000 0.00 0.00 0.00 4.18
2180 2304 1.281867 TCTTCCCTCATCGGCACATTT 59.718 47.619 0.00 0.00 0.00 2.32
2190 2314 4.335315 TCATCGGCACATTTGAAGAATACC 59.665 41.667 0.00 0.00 0.00 2.73
2193 2317 3.727673 CGGCACATTTGAAGAATACCGTG 60.728 47.826 0.00 0.00 33.64 4.94
2212 2336 3.181475 CGTGTACTCCAACCATATCAGCT 60.181 47.826 0.00 0.00 0.00 4.24
2227 2351 2.339728 CAGCTAGACTGGCTATACGC 57.660 55.000 13.54 0.00 43.19 4.42
2234 2358 2.225963 AGACTGGCTATACGCGACATAC 59.774 50.000 15.93 0.00 40.44 2.39
2235 2359 1.268899 ACTGGCTATACGCGACATACC 59.731 52.381 15.93 9.34 40.44 2.73
2245 2369 2.415168 ACGCGACATACCAACAAGATTG 59.585 45.455 15.93 0.00 0.00 2.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.933807 GTTAGAATTAACCTTGTTGTAGAGTCC 58.066 37.037 0.00 0.00 34.37 3.85
1 2 9.485206 TGTTAGAATTAACCTTGTTGTAGAGTC 57.515 33.333 0.00 0.00 38.71 3.36
2 3 9.490379 CTGTTAGAATTAACCTTGTTGTAGAGT 57.510 33.333 0.00 0.00 38.71 3.24
3 4 9.706691 TCTGTTAGAATTAACCTTGTTGTAGAG 57.293 33.333 0.00 0.00 38.71 2.43
4 5 9.706691 CTCTGTTAGAATTAACCTTGTTGTAGA 57.293 33.333 0.00 0.00 38.71 2.59
5 6 9.706691 TCTCTGTTAGAATTAACCTTGTTGTAG 57.293 33.333 0.00 0.00 38.71 2.74
7 8 9.220767 GATCTCTGTTAGAATTAACCTTGTTGT 57.779 33.333 0.00 0.00 38.71 3.32
8 9 9.442047 AGATCTCTGTTAGAATTAACCTTGTTG 57.558 33.333 0.00 0.00 38.71 3.33
9 10 9.660180 GAGATCTCTGTTAGAATTAACCTTGTT 57.340 33.333 15.80 0.00 38.71 2.83
10 11 9.041354 AGAGATCTCTGTTAGAATTAACCTTGT 57.959 33.333 24.56 0.00 38.71 3.16
11 12 9.883142 AAGAGATCTCTGTTAGAATTAACCTTG 57.117 33.333 25.78 0.00 40.36 3.61
13 14 9.261035 TGAAGAGATCTCTGTTAGAATTAACCT 57.739 33.333 25.78 4.76 40.36 3.50
14 15 9.877178 TTGAAGAGATCTCTGTTAGAATTAACC 57.123 33.333 25.78 0.00 40.36 2.85
18 19 7.973388 CGAGTTGAAGAGATCTCTGTTAGAATT 59.027 37.037 25.78 7.51 40.36 2.17
19 20 7.338196 TCGAGTTGAAGAGATCTCTGTTAGAAT 59.662 37.037 25.78 8.29 40.36 2.40
20 21 6.655425 TCGAGTTGAAGAGATCTCTGTTAGAA 59.345 38.462 25.78 11.13 40.36 2.10
21 22 6.174049 TCGAGTTGAAGAGATCTCTGTTAGA 58.826 40.000 25.78 15.02 40.36 2.10
22 23 6.429791 TCGAGTTGAAGAGATCTCTGTTAG 57.570 41.667 25.78 13.17 40.36 2.34
23 24 8.507524 TTATCGAGTTGAAGAGATCTCTGTTA 57.492 34.615 25.78 12.21 40.36 2.41
24 25 5.913137 ATCGAGTTGAAGAGATCTCTGTT 57.087 39.130 25.78 11.43 40.36 3.16
25 26 7.397892 TTTATCGAGTTGAAGAGATCTCTGT 57.602 36.000 25.78 15.30 40.36 3.41
26 27 8.694975 TTTTTATCGAGTTGAAGAGATCTCTG 57.305 34.615 25.78 11.41 40.36 3.35
50 51 5.413523 AGGCTAATCACCGTAAACGATTTTT 59.586 36.000 3.65 0.00 43.02 1.94
51 52 4.939439 AGGCTAATCACCGTAAACGATTTT 59.061 37.500 3.65 0.00 43.02 1.82
52 53 4.510571 AGGCTAATCACCGTAAACGATTT 58.489 39.130 3.65 0.00 43.02 2.17
53 54 4.117685 GAGGCTAATCACCGTAAACGATT 58.882 43.478 3.65 0.00 43.02 3.34
54 55 3.383825 AGAGGCTAATCACCGTAAACGAT 59.616 43.478 3.65 0.00 43.02 3.73
55 56 2.756760 AGAGGCTAATCACCGTAAACGA 59.243 45.455 3.65 0.00 43.02 3.85
56 57 3.114065 GAGAGGCTAATCACCGTAAACG 58.886 50.000 0.00 0.00 39.44 3.60
57 58 4.119442 TGAGAGGCTAATCACCGTAAAC 57.881 45.455 0.00 0.00 0.00 2.01
58 59 4.811969 TTGAGAGGCTAATCACCGTAAA 57.188 40.909 1.58 0.00 0.00 2.01
59 60 4.649674 AGATTGAGAGGCTAATCACCGTAA 59.350 41.667 10.30 0.00 36.11 3.18
60 61 4.215908 AGATTGAGAGGCTAATCACCGTA 58.784 43.478 10.30 0.00 36.11 4.02
61 62 3.034635 AGATTGAGAGGCTAATCACCGT 58.965 45.455 10.30 0.00 36.11 4.83
62 63 3.742433 AGATTGAGAGGCTAATCACCG 57.258 47.619 10.30 0.00 36.11 4.94
63 64 5.028549 TCAAGATTGAGAGGCTAATCACC 57.971 43.478 10.30 3.12 36.11 4.02
64 65 6.991531 AGAATCAAGATTGAGAGGCTAATCAC 59.008 38.462 10.30 0.00 41.08 3.06
65 66 6.990939 CAGAATCAAGATTGAGAGGCTAATCA 59.009 38.462 10.30 4.79 41.08 2.57
66 67 6.073112 GCAGAATCAAGATTGAGAGGCTAATC 60.073 42.308 0.00 1.06 41.08 1.75
67 68 5.764192 GCAGAATCAAGATTGAGAGGCTAAT 59.236 40.000 0.00 0.00 41.08 1.73
68 69 5.121811 GCAGAATCAAGATTGAGAGGCTAA 58.878 41.667 0.00 0.00 41.08 3.09
69 70 4.701765 GCAGAATCAAGATTGAGAGGCTA 58.298 43.478 0.00 0.00 41.08 3.93
70 71 3.543665 GCAGAATCAAGATTGAGAGGCT 58.456 45.455 0.00 0.00 41.08 4.58
71 72 2.287373 CGCAGAATCAAGATTGAGAGGC 59.713 50.000 0.00 2.25 41.08 4.70
72 73 3.309138 CACGCAGAATCAAGATTGAGAGG 59.691 47.826 0.00 0.00 41.08 3.69
73 74 3.242349 GCACGCAGAATCAAGATTGAGAG 60.242 47.826 0.00 0.00 41.08 3.20
74 75 2.674852 GCACGCAGAATCAAGATTGAGA 59.325 45.455 0.00 0.00 41.08 3.27
75 76 2.417586 TGCACGCAGAATCAAGATTGAG 59.582 45.455 0.00 0.00 41.08 3.02
76 77 2.425539 TGCACGCAGAATCAAGATTGA 58.574 42.857 0.00 0.00 42.14 2.57
77 78 2.905959 TGCACGCAGAATCAAGATTG 57.094 45.000 0.00 0.00 0.00 2.67
78 79 4.171005 CAAATGCACGCAGAATCAAGATT 58.829 39.130 0.00 0.00 0.00 2.40
79 80 3.192001 ACAAATGCACGCAGAATCAAGAT 59.808 39.130 0.00 0.00 0.00 2.40
80 81 2.553602 ACAAATGCACGCAGAATCAAGA 59.446 40.909 0.00 0.00 0.00 3.02
81 82 2.659757 CACAAATGCACGCAGAATCAAG 59.340 45.455 0.00 0.00 0.00 3.02
82 83 2.607526 CCACAAATGCACGCAGAATCAA 60.608 45.455 0.00 0.00 0.00 2.57
83 84 1.068402 CCACAAATGCACGCAGAATCA 60.068 47.619 0.00 0.00 0.00 2.57
84 85 1.068333 ACCACAAATGCACGCAGAATC 60.068 47.619 0.00 0.00 0.00 2.52
85 86 0.961019 ACCACAAATGCACGCAGAAT 59.039 45.000 0.00 0.00 0.00 2.40
86 87 0.030504 CACCACAAATGCACGCAGAA 59.969 50.000 0.00 0.00 0.00 3.02
87 88 1.653667 CACCACAAATGCACGCAGA 59.346 52.632 0.00 0.00 0.00 4.26
88 89 1.372004 CCACCACAAATGCACGCAG 60.372 57.895 0.00 0.00 0.00 5.18
89 90 0.819666 TACCACCACAAATGCACGCA 60.820 50.000 0.00 0.00 0.00 5.24
90 91 0.109781 CTACCACCACAAATGCACGC 60.110 55.000 0.00 0.00 0.00 5.34
91 92 1.518325 TCTACCACCACAAATGCACG 58.482 50.000 0.00 0.00 0.00 5.34
92 93 2.164219 CCATCTACCACCACAAATGCAC 59.836 50.000 0.00 0.00 0.00 4.57
93 94 2.040947 TCCATCTACCACCACAAATGCA 59.959 45.455 0.00 0.00 0.00 3.96
94 95 2.722094 TCCATCTACCACCACAAATGC 58.278 47.619 0.00 0.00 0.00 3.56
95 96 4.379394 CGTTTCCATCTACCACCACAAATG 60.379 45.833 0.00 0.00 0.00 2.32
96 97 3.756434 CGTTTCCATCTACCACCACAAAT 59.244 43.478 0.00 0.00 0.00 2.32
97 98 3.142951 CGTTTCCATCTACCACCACAAA 58.857 45.455 0.00 0.00 0.00 2.83
98 99 2.551287 CCGTTTCCATCTACCACCACAA 60.551 50.000 0.00 0.00 0.00 3.33
99 100 1.002659 CCGTTTCCATCTACCACCACA 59.997 52.381 0.00 0.00 0.00 4.17
100 101 1.677820 CCCGTTTCCATCTACCACCAC 60.678 57.143 0.00 0.00 0.00 4.16
101 102 0.616371 CCCGTTTCCATCTACCACCA 59.384 55.000 0.00 0.00 0.00 4.17
102 103 0.616891 ACCCGTTTCCATCTACCACC 59.383 55.000 0.00 0.00 0.00 4.61
103 104 1.677820 CCACCCGTTTCCATCTACCAC 60.678 57.143 0.00 0.00 0.00 4.16
104 105 0.616371 CCACCCGTTTCCATCTACCA 59.384 55.000 0.00 0.00 0.00 3.25
105 106 0.746923 GCCACCCGTTTCCATCTACC 60.747 60.000 0.00 0.00 0.00 3.18
106 107 0.746923 GGCCACCCGTTTCCATCTAC 60.747 60.000 0.00 0.00 0.00 2.59
107 108 1.605453 GGCCACCCGTTTCCATCTA 59.395 57.895 0.00 0.00 0.00 1.98
108 109 2.355115 GGCCACCCGTTTCCATCT 59.645 61.111 0.00 0.00 0.00 2.90
127 128 4.072088 GGTTCGCGCCAGTCAACG 62.072 66.667 0.00 0.00 0.00 4.10
128 129 4.072088 CGGTTCGCGCCAGTCAAC 62.072 66.667 0.00 0.00 0.00 3.18
139 140 3.622060 AACCTGATGGCCCGGTTCG 62.622 63.158 0.00 0.00 36.32 3.95
140 141 1.304134 AAACCTGATGGCCCGGTTC 60.304 57.895 13.97 1.61 39.97 3.62
141 142 1.606313 CAAACCTGATGGCCCGGTT 60.606 57.895 0.00 5.08 42.52 4.44
142 143 2.035626 CAAACCTGATGGCCCGGT 59.964 61.111 0.00 0.00 36.63 5.28
143 144 1.750399 CTCAAACCTGATGGCCCGG 60.750 63.158 0.00 0.00 36.63 5.73
144 145 0.609131 AACTCAAACCTGATGGCCCG 60.609 55.000 0.00 0.00 36.63 6.13
145 146 1.177401 GAACTCAAACCTGATGGCCC 58.823 55.000 0.00 0.00 36.63 5.80
146 147 1.815003 CTGAACTCAAACCTGATGGCC 59.185 52.381 0.00 0.00 36.63 5.36
147 148 2.783135 TCTGAACTCAAACCTGATGGC 58.217 47.619 0.00 0.00 36.63 4.40
148 149 5.532406 TCTTTTCTGAACTCAAACCTGATGG 59.468 40.000 0.00 0.00 39.83 3.51
149 150 6.038603 TGTCTTTTCTGAACTCAAACCTGATG 59.961 38.462 0.00 0.00 0.00 3.07
150 151 6.122277 TGTCTTTTCTGAACTCAAACCTGAT 58.878 36.000 0.00 0.00 0.00 2.90
151 152 5.496556 TGTCTTTTCTGAACTCAAACCTGA 58.503 37.500 0.00 0.00 0.00 3.86
152 153 5.355350 ACTGTCTTTTCTGAACTCAAACCTG 59.645 40.000 0.00 0.00 0.00 4.00
153 154 5.501156 ACTGTCTTTTCTGAACTCAAACCT 58.499 37.500 0.00 0.00 0.00 3.50
154 155 5.819825 ACTGTCTTTTCTGAACTCAAACC 57.180 39.130 0.00 0.00 0.00 3.27
155 156 6.017852 CCCTACTGTCTTTTCTGAACTCAAAC 60.018 42.308 0.00 0.00 0.00 2.93
156 157 6.055588 CCCTACTGTCTTTTCTGAACTCAAA 58.944 40.000 0.00 0.00 0.00 2.69
157 158 5.454755 CCCCTACTGTCTTTTCTGAACTCAA 60.455 44.000 0.00 0.00 0.00 3.02
158 159 4.040461 CCCCTACTGTCTTTTCTGAACTCA 59.960 45.833 0.00 0.00 0.00 3.41
159 160 4.563786 CCCCCTACTGTCTTTTCTGAACTC 60.564 50.000 0.00 0.00 0.00 3.01
160 161 3.328050 CCCCCTACTGTCTTTTCTGAACT 59.672 47.826 0.00 0.00 0.00 3.01
161 162 3.676093 CCCCCTACTGTCTTTTCTGAAC 58.324 50.000 0.00 0.00 0.00 3.18
162 163 2.039879 GCCCCCTACTGTCTTTTCTGAA 59.960 50.000 0.00 0.00 0.00 3.02
163 164 1.628846 GCCCCCTACTGTCTTTTCTGA 59.371 52.381 0.00 0.00 0.00 3.27
164 165 1.351017 TGCCCCCTACTGTCTTTTCTG 59.649 52.381 0.00 0.00 0.00 3.02
165 166 1.742308 TGCCCCCTACTGTCTTTTCT 58.258 50.000 0.00 0.00 0.00 2.52
166 167 2.160205 GTTGCCCCCTACTGTCTTTTC 58.840 52.381 0.00 0.00 0.00 2.29
167 168 1.497286 TGTTGCCCCCTACTGTCTTTT 59.503 47.619 0.00 0.00 0.00 2.27
168 169 1.145571 TGTTGCCCCCTACTGTCTTT 58.854 50.000 0.00 0.00 0.00 2.52
169 170 1.145571 TTGTTGCCCCCTACTGTCTT 58.854 50.000 0.00 0.00 0.00 3.01
170 171 1.073923 CTTTGTTGCCCCCTACTGTCT 59.926 52.381 0.00 0.00 0.00 3.41
171 172 1.202891 ACTTTGTTGCCCCCTACTGTC 60.203 52.381 0.00 0.00 0.00 3.51
172 173 0.850784 ACTTTGTTGCCCCCTACTGT 59.149 50.000 0.00 0.00 0.00 3.55
173 174 1.534729 GACTTTGTTGCCCCCTACTG 58.465 55.000 0.00 0.00 0.00 2.74
174 175 0.036306 CGACTTTGTTGCCCCCTACT 59.964 55.000 0.00 0.00 0.00 2.57
175 176 0.250597 ACGACTTTGTTGCCCCCTAC 60.251 55.000 0.00 0.00 0.00 3.18
176 177 0.250553 CACGACTTTGTTGCCCCCTA 60.251 55.000 0.00 0.00 0.00 3.53
177 178 1.528309 CACGACTTTGTTGCCCCCT 60.528 57.895 0.00 0.00 0.00 4.79
178 179 3.039134 CACGACTTTGTTGCCCCC 58.961 61.111 0.00 0.00 0.00 5.40
179 180 1.734388 AAGCACGACTTTGTTGCCCC 61.734 55.000 0.00 0.00 33.71 5.80
180 181 0.317854 GAAGCACGACTTTGTTGCCC 60.318 55.000 0.00 0.00 39.29 5.36
181 182 0.663153 AGAAGCACGACTTTGTTGCC 59.337 50.000 0.00 0.00 39.29 4.52
182 183 1.330521 TCAGAAGCACGACTTTGTTGC 59.669 47.619 0.00 0.00 39.29 4.17
183 184 3.673746 TTCAGAAGCACGACTTTGTTG 57.326 42.857 0.00 0.00 39.29 3.33
184 185 4.900635 ATTTCAGAAGCACGACTTTGTT 57.099 36.364 0.00 0.00 39.29 2.83
185 186 5.057149 AGTATTTCAGAAGCACGACTTTGT 58.943 37.500 0.00 0.00 39.29 2.83
186 187 5.389935 GGAGTATTTCAGAAGCACGACTTTG 60.390 44.000 0.00 0.00 39.29 2.77
187 188 4.691216 GGAGTATTTCAGAAGCACGACTTT 59.309 41.667 0.00 0.00 39.29 2.66
188 189 4.246458 GGAGTATTTCAGAAGCACGACTT 58.754 43.478 0.00 0.00 42.98 3.01
189 190 3.368531 GGGAGTATTTCAGAAGCACGACT 60.369 47.826 0.00 0.00 0.00 4.18
190 191 2.930682 GGGAGTATTTCAGAAGCACGAC 59.069 50.000 0.00 0.00 0.00 4.34
191 192 2.832129 AGGGAGTATTTCAGAAGCACGA 59.168 45.455 0.00 0.00 0.00 4.35
192 193 3.118956 AGAGGGAGTATTTCAGAAGCACG 60.119 47.826 0.00 0.00 0.00 5.34
193 194 4.161377 AGAGAGGGAGTATTTCAGAAGCAC 59.839 45.833 0.00 0.00 0.00 4.40
194 195 4.357325 AGAGAGGGAGTATTTCAGAAGCA 58.643 43.478 0.00 0.00 0.00 3.91
195 196 4.202212 GGAGAGAGGGAGTATTTCAGAAGC 60.202 50.000 0.00 0.00 0.00 3.86
196 197 4.037446 CGGAGAGAGGGAGTATTTCAGAAG 59.963 50.000 0.00 0.00 0.00 2.85
197 198 3.954904 CGGAGAGAGGGAGTATTTCAGAA 59.045 47.826 0.00 0.00 0.00 3.02
198 199 3.053544 ACGGAGAGAGGGAGTATTTCAGA 60.054 47.826 0.00 0.00 0.00 3.27
199 200 3.292460 ACGGAGAGAGGGAGTATTTCAG 58.708 50.000 0.00 0.00 0.00 3.02
200 201 3.383698 ACGGAGAGAGGGAGTATTTCA 57.616 47.619 0.00 0.00 0.00 2.69
201 202 5.593502 TCTTTACGGAGAGAGGGAGTATTTC 59.406 44.000 0.00 0.00 0.00 2.17
202 203 5.516984 TCTTTACGGAGAGAGGGAGTATTT 58.483 41.667 0.00 0.00 0.00 1.40
203 204 5.126699 TCTTTACGGAGAGAGGGAGTATT 57.873 43.478 0.00 0.00 0.00 1.89
204 205 4.792513 TCTTTACGGAGAGAGGGAGTAT 57.207 45.455 0.00 0.00 0.00 2.12
205 206 4.581309 TTCTTTACGGAGAGAGGGAGTA 57.419 45.455 0.00 0.00 0.00 2.59
206 207 3.453059 TTCTTTACGGAGAGAGGGAGT 57.547 47.619 0.00 0.00 0.00 3.85
207 208 6.658188 ATATTTCTTTACGGAGAGAGGGAG 57.342 41.667 0.00 0.00 0.00 4.30
208 209 7.255871 GCTTATATTTCTTTACGGAGAGAGGGA 60.256 40.741 0.00 0.00 0.00 4.20
209 210 6.869388 GCTTATATTTCTTTACGGAGAGAGGG 59.131 42.308 0.00 0.00 0.00 4.30
210 211 7.662897 AGCTTATATTTCTTTACGGAGAGAGG 58.337 38.462 0.00 0.00 0.00 3.69
280 281 9.685828 CCGAAATAAGTGTAGAAATTCCAAAAA 57.314 29.630 0.00 0.00 0.00 1.94
281 282 8.301002 CCCGAAATAAGTGTAGAAATTCCAAAA 58.699 33.333 0.00 0.00 0.00 2.44
282 283 7.666388 TCCCGAAATAAGTGTAGAAATTCCAAA 59.334 33.333 0.00 0.00 0.00 3.28
283 284 7.169591 TCCCGAAATAAGTGTAGAAATTCCAA 58.830 34.615 0.00 0.00 0.00 3.53
284 285 6.713276 TCCCGAAATAAGTGTAGAAATTCCA 58.287 36.000 0.00 0.00 0.00 3.53
285 286 7.255139 CCATCCCGAAATAAGTGTAGAAATTCC 60.255 40.741 0.00 0.00 0.00 3.01
286 287 7.497909 TCCATCCCGAAATAAGTGTAGAAATTC 59.502 37.037 0.00 0.00 0.00 2.17
287 288 7.343357 TCCATCCCGAAATAAGTGTAGAAATT 58.657 34.615 0.00 0.00 0.00 1.82
288 289 6.895782 TCCATCCCGAAATAAGTGTAGAAAT 58.104 36.000 0.00 0.00 0.00 2.17
289 290 6.302535 TCCATCCCGAAATAAGTGTAGAAA 57.697 37.500 0.00 0.00 0.00 2.52
290 291 5.163343 CCTCCATCCCGAAATAAGTGTAGAA 60.163 44.000 0.00 0.00 0.00 2.10
291 292 4.344102 CCTCCATCCCGAAATAAGTGTAGA 59.656 45.833 0.00 0.00 0.00 2.59
292 293 4.503296 CCCTCCATCCCGAAATAAGTGTAG 60.503 50.000 0.00 0.00 0.00 2.74
293 294 3.389983 CCCTCCATCCCGAAATAAGTGTA 59.610 47.826 0.00 0.00 0.00 2.90
294 295 2.172717 CCCTCCATCCCGAAATAAGTGT 59.827 50.000 0.00 0.00 0.00 3.55
295 296 2.438021 TCCCTCCATCCCGAAATAAGTG 59.562 50.000 0.00 0.00 0.00 3.16
296 297 2.706190 CTCCCTCCATCCCGAAATAAGT 59.294 50.000 0.00 0.00 0.00 2.24
297 298 2.706190 ACTCCCTCCATCCCGAAATAAG 59.294 50.000 0.00 0.00 0.00 1.73
298 299 2.771688 ACTCCCTCCATCCCGAAATAA 58.228 47.619 0.00 0.00 0.00 1.40
299 300 2.489528 ACTCCCTCCATCCCGAAATA 57.510 50.000 0.00 0.00 0.00 1.40
300 301 2.489528 TACTCCCTCCATCCCGAAAT 57.510 50.000 0.00 0.00 0.00 2.17
301 302 2.257391 TTACTCCCTCCATCCCGAAA 57.743 50.000 0.00 0.00 0.00 3.46
302 303 2.489528 ATTACTCCCTCCATCCCGAA 57.510 50.000 0.00 0.00 0.00 4.30
303 304 2.178325 TGTATTACTCCCTCCATCCCGA 59.822 50.000 0.00 0.00 0.00 5.14
304 305 2.605257 TGTATTACTCCCTCCATCCCG 58.395 52.381 0.00 0.00 0.00 5.14
305 306 6.697641 TTTATGTATTACTCCCTCCATCCC 57.302 41.667 0.00 0.00 0.00 3.85
318 319 9.509956 CCGTGGAGGGAATATTTTTATGTATTA 57.490 33.333 0.00 0.00 35.97 0.98
319 320 8.221944 TCCGTGGAGGGAATATTTTTATGTATT 58.778 33.333 0.00 0.00 41.52 1.89
320 321 7.751646 TCCGTGGAGGGAATATTTTTATGTAT 58.248 34.615 0.00 0.00 41.52 2.29
321 322 7.139287 TCCGTGGAGGGAATATTTTTATGTA 57.861 36.000 0.00 0.00 41.52 2.29
322 323 6.008696 TCCGTGGAGGGAATATTTTTATGT 57.991 37.500 0.00 0.00 41.52 2.29
323 324 6.952773 TTCCGTGGAGGGAATATTTTTATG 57.047 37.500 0.00 0.00 41.08 1.90
334 335 2.235402 GACAACTAATTCCGTGGAGGGA 59.765 50.000 0.00 0.00 41.52 4.20
335 336 2.027561 TGACAACTAATTCCGTGGAGGG 60.028 50.000 0.00 0.00 41.52 4.30
336 337 3.328382 TGACAACTAATTCCGTGGAGG 57.672 47.619 0.00 0.00 42.97 4.30
337 338 4.513692 TGTTTGACAACTAATTCCGTGGAG 59.486 41.667 0.00 0.00 33.58 3.86
338 339 4.452825 TGTTTGACAACTAATTCCGTGGA 58.547 39.130 0.00 0.00 33.58 4.02
339 340 4.513692 TCTGTTTGACAACTAATTCCGTGG 59.486 41.667 0.00 0.00 33.58 4.94
340 341 5.666969 TCTGTTTGACAACTAATTCCGTG 57.333 39.130 0.00 0.00 33.58 4.94
341 342 5.181245 CCATCTGTTTGACAACTAATTCCGT 59.819 40.000 0.00 0.00 33.58 4.69
342 343 5.631026 CCATCTGTTTGACAACTAATTCCG 58.369 41.667 0.00 0.00 33.58 4.30
343 344 5.402398 GCCATCTGTTTGACAACTAATTCC 58.598 41.667 0.00 0.00 33.58 3.01
344 345 5.048083 TGGCCATCTGTTTGACAACTAATTC 60.048 40.000 0.00 0.00 33.58 2.17
345 346 4.832266 TGGCCATCTGTTTGACAACTAATT 59.168 37.500 0.00 0.00 33.58 1.40
346 347 4.406456 TGGCCATCTGTTTGACAACTAAT 58.594 39.130 0.00 0.00 33.58 1.73
347 348 3.826524 TGGCCATCTGTTTGACAACTAA 58.173 40.909 0.00 0.00 33.58 2.24
348 349 3.500448 TGGCCATCTGTTTGACAACTA 57.500 42.857 0.00 0.00 33.58 2.24
349 350 2.363306 TGGCCATCTGTTTGACAACT 57.637 45.000 0.00 0.00 33.58 3.16
350 351 3.123050 GTTTGGCCATCTGTTTGACAAC 58.877 45.455 6.09 0.00 0.00 3.32
351 352 3.030291 AGTTTGGCCATCTGTTTGACAA 58.970 40.909 6.09 0.00 0.00 3.18
352 353 2.622942 GAGTTTGGCCATCTGTTTGACA 59.377 45.455 6.09 0.00 0.00 3.58
353 354 2.029918 GGAGTTTGGCCATCTGTTTGAC 60.030 50.000 6.09 0.00 0.00 3.18
354 355 2.238521 GGAGTTTGGCCATCTGTTTGA 58.761 47.619 6.09 0.00 0.00 2.69
355 356 1.068333 CGGAGTTTGGCCATCTGTTTG 60.068 52.381 6.09 0.00 0.00 2.93
356 357 1.247567 CGGAGTTTGGCCATCTGTTT 58.752 50.000 6.09 0.00 0.00 2.83
357 358 0.609131 CCGGAGTTTGGCCATCTGTT 60.609 55.000 6.09 0.00 0.00 3.16
358 359 1.002134 CCGGAGTTTGGCCATCTGT 60.002 57.895 6.09 0.00 0.00 3.41
359 360 0.107017 ATCCGGAGTTTGGCCATCTG 60.107 55.000 11.34 6.46 0.00 2.90
360 361 0.625849 AATCCGGAGTTTGGCCATCT 59.374 50.000 11.34 8.70 0.00 2.90
361 362 1.134946 CAAATCCGGAGTTTGGCCATC 59.865 52.381 15.75 0.00 33.91 3.51
362 363 1.185315 CAAATCCGGAGTTTGGCCAT 58.815 50.000 15.75 0.00 33.91 4.40
363 364 0.897863 CCAAATCCGGAGTTTGGCCA 60.898 55.000 29.31 0.00 46.27 5.36
364 365 1.890174 CCAAATCCGGAGTTTGGCC 59.110 57.895 29.31 0.00 46.27 5.36
367 368 2.226437 CACTGTCCAAATCCGGAGTTTG 59.774 50.000 15.75 20.05 35.10 2.93
368 369 2.504367 CACTGTCCAAATCCGGAGTTT 58.496 47.619 15.75 10.00 35.10 2.66
369 370 1.271379 CCACTGTCCAAATCCGGAGTT 60.271 52.381 12.20 12.20 35.10 3.01
370 371 0.324943 CCACTGTCCAAATCCGGAGT 59.675 55.000 11.34 3.58 35.10 3.85
371 372 0.613260 TCCACTGTCCAAATCCGGAG 59.387 55.000 11.34 0.00 35.10 4.63
372 373 0.613260 CTCCACTGTCCAAATCCGGA 59.387 55.000 6.61 6.61 0.00 5.14
373 374 0.324943 ACTCCACTGTCCAAATCCGG 59.675 55.000 0.00 0.00 0.00 5.14
374 375 1.442769 CACTCCACTGTCCAAATCCG 58.557 55.000 0.00 0.00 0.00 4.18
375 376 1.168714 GCACTCCACTGTCCAAATCC 58.831 55.000 0.00 0.00 0.00 3.01
376 377 1.808945 CTGCACTCCACTGTCCAAATC 59.191 52.381 0.00 0.00 0.00 2.17
377 378 1.421268 TCTGCACTCCACTGTCCAAAT 59.579 47.619 0.00 0.00 0.00 2.32
378 379 0.836606 TCTGCACTCCACTGTCCAAA 59.163 50.000 0.00 0.00 0.00 3.28
379 380 0.836606 TTCTGCACTCCACTGTCCAA 59.163 50.000 0.00 0.00 0.00 3.53
380 381 1.002430 GATTCTGCACTCCACTGTCCA 59.998 52.381 0.00 0.00 0.00 4.02
381 382 1.002430 TGATTCTGCACTCCACTGTCC 59.998 52.381 0.00 0.00 0.00 4.02
382 383 2.462456 TGATTCTGCACTCCACTGTC 57.538 50.000 0.00 0.00 0.00 3.51
383 384 2.158769 TGTTGATTCTGCACTCCACTGT 60.159 45.455 0.00 0.00 0.00 3.55
384 385 2.497138 TGTTGATTCTGCACTCCACTG 58.503 47.619 0.00 0.00 0.00 3.66
385 386 2.936919 TGTTGATTCTGCACTCCACT 57.063 45.000 0.00 0.00 0.00 4.00
386 387 4.232221 CAAATGTTGATTCTGCACTCCAC 58.768 43.478 0.00 0.00 0.00 4.02
387 388 3.256383 CCAAATGTTGATTCTGCACTCCA 59.744 43.478 0.00 0.00 0.00 3.86
388 389 3.507233 TCCAAATGTTGATTCTGCACTCC 59.493 43.478 0.00 0.00 0.00 3.85
389 390 4.771590 TCCAAATGTTGATTCTGCACTC 57.228 40.909 0.00 0.00 0.00 3.51
390 391 5.475719 CATTCCAAATGTTGATTCTGCACT 58.524 37.500 0.00 0.00 0.00 4.40
391 392 4.092383 GCATTCCAAATGTTGATTCTGCAC 59.908 41.667 1.99 0.00 0.00 4.57
392 393 4.247258 GCATTCCAAATGTTGATTCTGCA 58.753 39.130 1.99 0.00 0.00 4.41
393 394 3.305094 CGCATTCCAAATGTTGATTCTGC 59.695 43.478 1.99 0.00 0.00 4.26
394 395 3.861113 CCGCATTCCAAATGTTGATTCTG 59.139 43.478 1.99 0.00 0.00 3.02
395 396 3.763360 TCCGCATTCCAAATGTTGATTCT 59.237 39.130 1.99 0.00 0.00 2.40
396 397 4.108699 TCCGCATTCCAAATGTTGATTC 57.891 40.909 1.99 0.00 0.00 2.52
397 398 4.741321 ATCCGCATTCCAAATGTTGATT 57.259 36.364 1.99 0.00 0.00 2.57
398 399 4.741321 AATCCGCATTCCAAATGTTGAT 57.259 36.364 1.99 2.19 0.00 2.57
399 400 4.244066 CAAATCCGCATTCCAAATGTTGA 58.756 39.130 1.99 0.17 0.00 3.18
400 401 3.371591 CCAAATCCGCATTCCAAATGTTG 59.628 43.478 1.99 0.00 0.00 3.33
401 402 3.007831 ACCAAATCCGCATTCCAAATGTT 59.992 39.130 1.99 0.00 0.00 2.71
402 403 2.566724 ACCAAATCCGCATTCCAAATGT 59.433 40.909 1.99 0.00 0.00 2.71
403 404 2.931325 CACCAAATCCGCATTCCAAATG 59.069 45.455 0.00 0.00 0.00 2.32
404 405 2.830923 TCACCAAATCCGCATTCCAAAT 59.169 40.909 0.00 0.00 0.00 2.32
405 406 2.242926 TCACCAAATCCGCATTCCAAA 58.757 42.857 0.00 0.00 0.00 3.28
406 407 1.916506 TCACCAAATCCGCATTCCAA 58.083 45.000 0.00 0.00 0.00 3.53
407 408 1.750206 CATCACCAAATCCGCATTCCA 59.250 47.619 0.00 0.00 0.00 3.53
408 409 1.750778 ACATCACCAAATCCGCATTCC 59.249 47.619 0.00 0.00 0.00 3.01
409 410 3.181397 CAACATCACCAAATCCGCATTC 58.819 45.455 0.00 0.00 0.00 2.67
410 411 2.094078 CCAACATCACCAAATCCGCATT 60.094 45.455 0.00 0.00 0.00 3.56
411 412 1.477700 CCAACATCACCAAATCCGCAT 59.522 47.619 0.00 0.00 0.00 4.73
412 413 0.887247 CCAACATCACCAAATCCGCA 59.113 50.000 0.00 0.00 0.00 5.69
413 414 1.133025 CTCCAACATCACCAAATCCGC 59.867 52.381 0.00 0.00 0.00 5.54
414 415 1.745087 CCTCCAACATCACCAAATCCG 59.255 52.381 0.00 0.00 0.00 4.18
415 416 1.478105 GCCTCCAACATCACCAAATCC 59.522 52.381 0.00 0.00 0.00 3.01
416 417 1.478105 GGCCTCCAACATCACCAAATC 59.522 52.381 0.00 0.00 0.00 2.17
417 418 1.560505 GGCCTCCAACATCACCAAAT 58.439 50.000 0.00 0.00 0.00 2.32
418 419 0.541764 GGGCCTCCAACATCACCAAA 60.542 55.000 0.84 0.00 0.00 3.28
419 420 1.076549 GGGCCTCCAACATCACCAA 59.923 57.895 0.84 0.00 0.00 3.67
420 421 1.434513 AAGGGCCTCCAACATCACCA 61.435 55.000 6.46 0.00 34.83 4.17
421 422 0.251787 AAAGGGCCTCCAACATCACC 60.252 55.000 6.46 0.00 34.83 4.02
422 423 0.890683 CAAAGGGCCTCCAACATCAC 59.109 55.000 6.46 0.00 34.83 3.06
423 424 0.776810 TCAAAGGGCCTCCAACATCA 59.223 50.000 6.46 0.00 34.83 3.07
424 425 1.753073 CATCAAAGGGCCTCCAACATC 59.247 52.381 6.46 0.00 34.83 3.06
425 426 1.077663 ACATCAAAGGGCCTCCAACAT 59.922 47.619 6.46 0.00 34.83 2.71
426 427 0.482446 ACATCAAAGGGCCTCCAACA 59.518 50.000 6.46 0.00 34.83 3.33
427 428 1.177401 GACATCAAAGGGCCTCCAAC 58.823 55.000 6.46 0.00 34.83 3.77
428 429 0.776810 TGACATCAAAGGGCCTCCAA 59.223 50.000 6.46 0.00 34.83 3.53
429 430 0.329261 CTGACATCAAAGGGCCTCCA 59.671 55.000 6.46 0.00 34.83 3.86
430 431 0.620556 TCTGACATCAAAGGGCCTCC 59.379 55.000 6.46 0.00 0.00 4.30
431 432 2.026822 TCTTCTGACATCAAAGGGCCTC 60.027 50.000 6.46 0.00 0.00 4.70
432 433 1.988107 TCTTCTGACATCAAAGGGCCT 59.012 47.619 0.00 0.00 0.00 5.19
433 434 2.496899 TCTTCTGACATCAAAGGGCC 57.503 50.000 0.00 0.00 0.00 5.80
434 435 7.992754 ATATAATCTTCTGACATCAAAGGGC 57.007 36.000 4.87 0.00 0.00 5.19
439 440 9.494271 GTGGCTTATATAATCTTCTGACATCAA 57.506 33.333 0.00 0.00 0.00 2.57
440 441 7.814587 CGTGGCTTATATAATCTTCTGACATCA 59.185 37.037 0.00 0.00 0.00 3.07
441 442 7.201478 GCGTGGCTTATATAATCTTCTGACATC 60.201 40.741 0.00 0.00 0.00 3.06
442 443 6.591834 GCGTGGCTTATATAATCTTCTGACAT 59.408 38.462 0.00 0.00 0.00 3.06
443 444 5.926542 GCGTGGCTTATATAATCTTCTGACA 59.073 40.000 0.00 0.00 0.00 3.58
444 445 5.926542 TGCGTGGCTTATATAATCTTCTGAC 59.073 40.000 0.00 0.00 0.00 3.51
445 446 6.096673 TGCGTGGCTTATATAATCTTCTGA 57.903 37.500 0.00 0.00 0.00 3.27
446 447 6.974932 ATGCGTGGCTTATATAATCTTCTG 57.025 37.500 0.00 0.00 0.00 3.02
447 448 7.093289 ACCTATGCGTGGCTTATATAATCTTCT 60.093 37.037 0.00 0.00 0.00 2.85
448 449 7.010552 CACCTATGCGTGGCTTATATAATCTTC 59.989 40.741 0.00 0.00 0.00 2.87
449 450 6.818644 CACCTATGCGTGGCTTATATAATCTT 59.181 38.462 0.00 0.00 0.00 2.40
450 451 6.154534 TCACCTATGCGTGGCTTATATAATCT 59.845 38.462 0.00 0.00 34.36 2.40
451 452 6.338146 TCACCTATGCGTGGCTTATATAATC 58.662 40.000 0.00 0.00 34.36 1.75
452 453 6.294361 TCACCTATGCGTGGCTTATATAAT 57.706 37.500 0.00 0.00 34.36 1.28
453 454 5.731957 TCACCTATGCGTGGCTTATATAA 57.268 39.130 0.00 0.00 34.36 0.98
454 455 5.337250 CCTTCACCTATGCGTGGCTTATATA 60.337 44.000 0.00 0.00 34.36 0.86
455 456 4.563580 CCTTCACCTATGCGTGGCTTATAT 60.564 45.833 0.00 0.00 34.36 0.86
456 457 3.244078 CCTTCACCTATGCGTGGCTTATA 60.244 47.826 0.00 0.00 34.36 0.98
457 458 2.485479 CCTTCACCTATGCGTGGCTTAT 60.485 50.000 0.00 0.00 34.36 1.73
458 459 1.134521 CCTTCACCTATGCGTGGCTTA 60.135 52.381 0.00 0.00 34.36 3.09
459 460 0.392998 CCTTCACCTATGCGTGGCTT 60.393 55.000 0.00 0.00 34.36 4.35
460 461 1.221840 CCTTCACCTATGCGTGGCT 59.778 57.895 0.00 0.00 34.36 4.75
461 462 1.819632 CCCTTCACCTATGCGTGGC 60.820 63.158 0.00 0.00 34.36 5.01
462 463 1.819632 GCCCTTCACCTATGCGTGG 60.820 63.158 0.00 0.00 34.36 4.94
463 464 1.819632 GGCCCTTCACCTATGCGTG 60.820 63.158 0.00 0.00 34.93 5.34
464 465 1.995626 AGGCCCTTCACCTATGCGT 60.996 57.895 0.00 0.00 35.10 5.24
465 466 1.524621 CAGGCCCTTCACCTATGCG 60.525 63.158 0.00 0.00 35.10 4.73
466 467 1.152881 CCAGGCCCTTCACCTATGC 60.153 63.158 0.00 0.00 35.10 3.14
467 468 0.471617 CTCCAGGCCCTTCACCTATG 59.528 60.000 0.00 0.00 35.10 2.23
468 469 0.343372 TCTCCAGGCCCTTCACCTAT 59.657 55.000 0.00 0.00 35.10 2.57
469 470 0.325671 CTCTCCAGGCCCTTCACCTA 60.326 60.000 0.00 0.00 35.10 3.08
470 471 1.614824 CTCTCCAGGCCCTTCACCT 60.615 63.158 0.00 0.00 38.35 4.00
471 472 2.674220 CCTCTCCAGGCCCTTCACC 61.674 68.421 0.00 0.00 30.98 4.02
472 473 0.985490 ATCCTCTCCAGGCCCTTCAC 60.985 60.000 0.00 0.00 40.12 3.18
473 474 0.642156 TATCCTCTCCAGGCCCTTCA 59.358 55.000 0.00 0.00 40.12 3.02
474 475 1.052617 GTATCCTCTCCAGGCCCTTC 58.947 60.000 0.00 0.00 40.12 3.46
475 476 0.644937 AGTATCCTCTCCAGGCCCTT 59.355 55.000 0.00 0.00 40.12 3.95
476 477 0.105246 CAGTATCCTCTCCAGGCCCT 60.105 60.000 0.00 0.00 40.12 5.19
477 478 1.124477 CCAGTATCCTCTCCAGGCCC 61.124 65.000 0.00 0.00 40.12 5.80
478 479 0.105453 TCCAGTATCCTCTCCAGGCC 60.105 60.000 0.00 0.00 40.12 5.19
479 480 1.794714 TTCCAGTATCCTCTCCAGGC 58.205 55.000 0.00 0.00 40.12 4.85
480 481 3.513515 GCTATTCCAGTATCCTCTCCAGG 59.486 52.174 0.00 0.00 42.01 4.45
481 482 4.415596 AGCTATTCCAGTATCCTCTCCAG 58.584 47.826 0.00 0.00 0.00 3.86
482 483 4.477536 AGCTATTCCAGTATCCTCTCCA 57.522 45.455 0.00 0.00 0.00 3.86
483 484 4.562552 GCAAGCTATTCCAGTATCCTCTCC 60.563 50.000 0.00 0.00 0.00 3.71
484 485 4.283212 AGCAAGCTATTCCAGTATCCTCTC 59.717 45.833 0.00 0.00 0.00 3.20
485 486 4.230455 AGCAAGCTATTCCAGTATCCTCT 58.770 43.478 0.00 0.00 0.00 3.69
486 487 4.615588 AGCAAGCTATTCCAGTATCCTC 57.384 45.455 0.00 0.00 0.00 3.71
487 488 4.164988 ACAAGCAAGCTATTCCAGTATCCT 59.835 41.667 0.00 0.00 0.00 3.24
488 489 4.455606 ACAAGCAAGCTATTCCAGTATCC 58.544 43.478 0.00 0.00 0.00 2.59
489 490 5.355350 ACAACAAGCAAGCTATTCCAGTATC 59.645 40.000 0.00 0.00 0.00 2.24
490 491 5.256474 ACAACAAGCAAGCTATTCCAGTAT 58.744 37.500 0.00 0.00 0.00 2.12
491 492 4.651778 ACAACAAGCAAGCTATTCCAGTA 58.348 39.130 0.00 0.00 0.00 2.74
492 493 3.490348 ACAACAAGCAAGCTATTCCAGT 58.510 40.909 0.00 0.00 0.00 4.00
493 494 4.022935 TGAACAACAAGCAAGCTATTCCAG 60.023 41.667 0.00 0.00 0.00 3.86
494 495 3.888323 TGAACAACAAGCAAGCTATTCCA 59.112 39.130 0.00 0.00 0.00 3.53
495 496 4.479619 CTGAACAACAAGCAAGCTATTCC 58.520 43.478 0.00 0.00 0.00 3.01
496 497 3.916776 GCTGAACAACAAGCAAGCTATTC 59.083 43.478 0.00 0.00 0.00 1.75
497 498 3.571401 AGCTGAACAACAAGCAAGCTATT 59.429 39.130 0.00 0.00 0.00 1.73
498 499 3.057736 CAGCTGAACAACAAGCAAGCTAT 60.058 43.478 8.42 0.00 0.00 2.97
499 500 2.291465 CAGCTGAACAACAAGCAAGCTA 59.709 45.455 8.42 0.00 0.00 3.32
500 501 1.066605 CAGCTGAACAACAAGCAAGCT 59.933 47.619 8.42 0.00 0.00 3.74
501 502 1.202336 ACAGCTGAACAACAAGCAAGC 60.202 47.619 23.35 0.00 0.00 4.01
502 503 2.542411 GGACAGCTGAACAACAAGCAAG 60.542 50.000 23.35 0.00 0.00 4.01
503 504 1.405105 GGACAGCTGAACAACAAGCAA 59.595 47.619 23.35 0.00 0.00 3.91
504 505 1.024271 GGACAGCTGAACAACAAGCA 58.976 50.000 23.35 0.00 0.00 3.91
505 506 1.002033 CTGGACAGCTGAACAACAAGC 60.002 52.381 23.35 1.13 0.00 4.01
506 507 1.605710 CCTGGACAGCTGAACAACAAG 59.394 52.381 23.35 8.58 0.00 3.16
507 508 1.679139 CCTGGACAGCTGAACAACAA 58.321 50.000 23.35 0.00 0.00 2.83
508 509 0.819259 GCCTGGACAGCTGAACAACA 60.819 55.000 23.35 10.20 0.00 3.33
509 510 0.536006 AGCCTGGACAGCTGAACAAC 60.536 55.000 23.35 12.70 39.69 3.32
510 511 1.839191 AGCCTGGACAGCTGAACAA 59.161 52.632 23.35 6.65 39.69 2.83
511 512 3.567308 AGCCTGGACAGCTGAACA 58.433 55.556 23.35 17.05 39.69 3.18
551 552 2.073816 CTAACGGCAATCAAGGTTCGT 58.926 47.619 0.00 0.00 0.00 3.85
553 554 3.071479 TGACTAACGGCAATCAAGGTTC 58.929 45.455 0.00 0.00 0.00 3.62
554 555 3.134574 TGACTAACGGCAATCAAGGTT 57.865 42.857 0.00 0.00 0.00 3.50
556 557 3.747099 CTTGACTAACGGCAATCAAGG 57.253 47.619 11.69 0.00 42.79 3.61
557 558 3.074412 ACCTTGACTAACGGCAATCAAG 58.926 45.455 12.29 12.29 45.00 3.02
558 559 3.071479 GACCTTGACTAACGGCAATCAA 58.929 45.455 0.00 0.00 0.00 2.57
559 560 2.301870 AGACCTTGACTAACGGCAATCA 59.698 45.455 0.00 0.00 0.00 2.57
560 561 2.973945 AGACCTTGACTAACGGCAATC 58.026 47.619 0.00 0.00 0.00 2.67
561 562 4.546829 TTAGACCTTGACTAACGGCAAT 57.453 40.909 0.00 0.00 0.00 3.56
562 563 4.060205 GTTTAGACCTTGACTAACGGCAA 58.940 43.478 0.00 0.00 30.95 4.52
563 564 3.555586 GGTTTAGACCTTGACTAACGGCA 60.556 47.826 0.00 0.00 42.99 5.69
567 568 6.473758 AGAATGGGTTTAGACCTTGACTAAC 58.526 40.000 1.94 0.00 45.75 2.34
599 600 9.431887 TGGGAGAAAATATTATATGCTTACGTC 57.568 33.333 0.00 0.00 0.00 4.34
615 616 2.158325 TGTTGGCCTCTTGGGAGAAAAT 60.158 45.455 3.32 0.00 41.86 1.82
620 621 0.329261 TGATGTTGGCCTCTTGGGAG 59.671 55.000 3.32 0.00 39.18 4.30
654 655 4.443913 TGATGAACATGCCATTGACTTG 57.556 40.909 0.00 0.00 0.00 3.16
663 664 0.740149 TCGCCAATGATGAACATGCC 59.260 50.000 0.00 0.00 39.39 4.40
698 699 0.318441 GAACAAAGGAAAGGGCAGCC 59.682 55.000 1.26 1.26 0.00 4.85
700 701 1.615392 CAGGAACAAAGGAAAGGGCAG 59.385 52.381 0.00 0.00 0.00 4.85
725 726 0.461961 ATAGCTCGACTGAACCAGGC 59.538 55.000 0.00 0.00 35.89 4.85
741 742 1.862008 GCTGCGAGGACAGAACGATAG 60.862 57.143 0.00 0.00 40.25 2.08
745 746 1.016130 ATTGCTGCGAGGACAGAACG 61.016 55.000 0.00 0.00 40.25 3.95
751 752 3.181485 ACTTAGAGTATTGCTGCGAGGAC 60.181 47.826 0.00 0.00 0.00 3.85
762 763 2.293586 TGGAGGCCCCACTTAGAGTATT 60.294 50.000 8.74 0.00 40.82 1.89
800 801 7.209475 TCATATGCACTCAAGTTATCGATTGA 58.791 34.615 1.71 0.48 34.41 2.57
801 802 7.412137 TCATATGCACTCAAGTTATCGATTG 57.588 36.000 1.71 0.00 0.00 2.67
802 803 6.146837 GCTCATATGCACTCAAGTTATCGATT 59.853 38.462 1.71 0.00 0.00 3.34
803 804 5.636965 GCTCATATGCACTCAAGTTATCGAT 59.363 40.000 2.16 2.16 0.00 3.59
804 805 4.984785 GCTCATATGCACTCAAGTTATCGA 59.015 41.667 0.00 0.00 0.00 3.59
805 806 4.746611 TGCTCATATGCACTCAAGTTATCG 59.253 41.667 0.00 0.00 38.12 2.92
806 807 6.798315 ATGCTCATATGCACTCAAGTTATC 57.202 37.500 0.00 0.00 46.33 1.75
807 808 8.098912 TCATATGCTCATATGCACTCAAGTTAT 58.901 33.333 19.77 0.00 46.31 1.89
808 809 7.444299 TCATATGCTCATATGCACTCAAGTTA 58.556 34.615 19.77 2.24 46.31 2.24
809 810 6.293698 TCATATGCTCATATGCACTCAAGTT 58.706 36.000 19.77 0.00 46.31 2.66
810 811 5.861727 TCATATGCTCATATGCACTCAAGT 58.138 37.500 19.77 0.00 46.31 3.16
852 853 9.965824 GAAACTGAACTGAATCCTTCAAAAATA 57.034 29.630 0.00 0.00 39.58 1.40
853 854 8.699130 AGAAACTGAACTGAATCCTTCAAAAAT 58.301 29.630 0.00 0.00 39.58 1.82
866 867 5.342433 CATGCACAAAAGAAACTGAACTGA 58.658 37.500 0.00 0.00 0.00 3.41
878 879 8.345565 GGATTATACTAGTTCCATGCACAAAAG 58.654 37.037 0.00 0.00 0.00 2.27
881 882 7.071196 AGAGGATTATACTAGTTCCATGCACAA 59.929 37.037 12.76 0.00 0.00 3.33
882 883 6.554982 AGAGGATTATACTAGTTCCATGCACA 59.445 38.462 12.76 0.00 0.00 4.57
908 909 7.487829 CCAAATTGTGAATATAAACGACTTGGG 59.512 37.037 9.04 0.00 0.00 4.12
941 942 0.654160 ATGTGCATGCTCGATCAACG 59.346 50.000 20.33 0.00 44.09 4.10
944 945 2.101249 TCACTATGTGCATGCTCGATCA 59.899 45.455 20.33 10.37 32.98 2.92
946 947 2.896745 TCACTATGTGCATGCTCGAT 57.103 45.000 20.33 13.24 32.98 3.59
962 963 1.701847 AGGGGCAGTCCATATGATCAC 59.298 52.381 3.65 0.00 37.22 3.06
978 979 4.040755 TCTCTCCCTGAAAAATAGAGGGG 58.959 47.826 0.00 0.00 45.94 4.79
983 984 4.578105 GTGGCATCTCTCCCTGAAAAATAG 59.422 45.833 0.00 0.00 0.00 1.73
985 986 3.359950 GTGGCATCTCTCCCTGAAAAAT 58.640 45.455 0.00 0.00 0.00 1.82
993 994 4.899239 CGGCGTGGCATCTCTCCC 62.899 72.222 0.00 0.00 0.00 4.30
994 995 4.148825 ACGGCGTGGCATCTCTCC 62.149 66.667 13.76 0.00 0.00 3.71
1062 1063 4.783227 AGGTATCCGATAAACAGGGCATAT 59.217 41.667 0.00 0.00 0.00 1.78
1074 1075 1.899814 GCCATGGACAGGTATCCGATA 59.100 52.381 18.40 0.00 42.24 2.92
1077 1078 1.071471 GGCCATGGACAGGTATCCG 59.929 63.158 18.40 0.00 42.24 4.18
1080 1081 1.422781 CTGATGGCCATGGACAGGTAT 59.577 52.381 27.68 9.17 36.12 2.73
1096 1097 2.003548 GGAAGCCCAGACCCCTGAT 61.004 63.158 0.00 0.00 43.02 2.90
1100 1101 3.732849 CCAGGAAGCCCAGACCCC 61.733 72.222 0.00 0.00 33.88 4.95
1101 1102 2.936032 ACCAGGAAGCCCAGACCC 60.936 66.667 0.00 0.00 33.88 4.46
1107 1108 0.038310 AAGTAAGCACCAGGAAGCCC 59.962 55.000 0.00 0.00 0.00 5.19
1110 1111 2.427506 GTCCAAGTAAGCACCAGGAAG 58.572 52.381 0.00 0.00 31.91 3.46
1140 1141 3.416156 AGAGACAAATCCACCAAGAAGC 58.584 45.455 0.00 0.00 0.00 3.86
1149 1150 3.578282 TCTGCAGTGTAGAGACAAATCCA 59.422 43.478 14.67 0.00 37.31 3.41
1152 1153 3.834813 TCCTCTGCAGTGTAGAGACAAAT 59.165 43.478 32.48 0.00 43.41 2.32
1155 1156 2.586648 TCCTCTGCAGTGTAGAGACA 57.413 50.000 32.48 19.06 43.41 3.41
1156 1157 2.165437 CCTTCCTCTGCAGTGTAGAGAC 59.835 54.545 32.48 0.00 43.41 3.36
1158 1159 2.165437 GTCCTTCCTCTGCAGTGTAGAG 59.835 54.545 26.32 26.32 41.03 2.43
1159 1160 2.171840 GTCCTTCCTCTGCAGTGTAGA 58.828 52.381 14.67 10.71 0.00 2.59
1160 1161 2.175202 AGTCCTTCCTCTGCAGTGTAG 58.825 52.381 14.67 10.37 0.00 2.74
1161 1162 2.310779 AGTCCTTCCTCTGCAGTGTA 57.689 50.000 14.67 0.00 0.00 2.90
1162 1163 1.428869 AAGTCCTTCCTCTGCAGTGT 58.571 50.000 14.67 0.00 0.00 3.55
1163 1164 2.551459 CAAAAGTCCTTCCTCTGCAGTG 59.449 50.000 14.67 11.58 0.00 3.66
1164 1165 2.487986 CCAAAAGTCCTTCCTCTGCAGT 60.488 50.000 14.67 0.00 0.00 4.40
1170 1171 3.493767 AGACACCAAAAGTCCTTCCTC 57.506 47.619 0.00 0.00 36.68 3.71
1172 1173 4.457466 TGTAAGACACCAAAAGTCCTTCC 58.543 43.478 0.00 0.00 36.68 3.46
1173 1174 6.262273 TGAATGTAAGACACCAAAAGTCCTTC 59.738 38.462 0.00 0.00 36.68 3.46
1176 1177 6.575162 ATGAATGTAAGACACCAAAAGTCC 57.425 37.500 0.00 0.00 36.68 3.85
1179 1180 7.176690 AGGGTAATGAATGTAAGACACCAAAAG 59.823 37.037 0.00 0.00 0.00 2.27
1215 1216 7.093771 CCAAATTTTAACAAGACTATCCCAGCT 60.094 37.037 0.00 0.00 0.00 4.24
1222 1223 9.423061 GCATCAACCAAATTTTAACAAGACTAT 57.577 29.630 0.00 0.00 0.00 2.12
1280 1390 5.104735 ACCTCCAAGTTAGATAAGCAGGAAG 60.105 44.000 0.00 0.00 0.00 3.46
1283 1393 4.762289 ACCTCCAAGTTAGATAAGCAGG 57.238 45.455 0.00 0.00 0.00 4.85
1286 1396 6.877322 TGTTTGTACCTCCAAGTTAGATAAGC 59.123 38.462 0.00 0.00 0.00 3.09
1322 1436 7.697691 TCAACTTTTGAGTGAGAAGAACATTC 58.302 34.615 0.00 0.00 34.08 2.67
1398 1512 3.305398 CTGGAGAGTGTTACCAGTCAC 57.695 52.381 0.00 0.00 44.06 3.67
1436 1550 4.261994 CCAACAACCATTCCGACATCTTTT 60.262 41.667 0.00 0.00 0.00 2.27
1445 1559 3.053831 ACTACTCCAACAACCATTCCG 57.946 47.619 0.00 0.00 0.00 4.30
1447 1561 4.578928 ACACAACTACTCCAACAACCATTC 59.421 41.667 0.00 0.00 0.00 2.67
1461 1575 8.687301 GCATAACAAAATACAACACACAACTAC 58.313 33.333 0.00 0.00 0.00 2.73
1469 1583 6.092748 CAGAGGGCATAACAAAATACAACAC 58.907 40.000 0.00 0.00 0.00 3.32
1496 1619 3.149196 CAACCCAAACACATAGACAGCT 58.851 45.455 0.00 0.00 0.00 4.24
1554 1678 3.208922 TCCTCACTCCCATAGTCCCATTA 59.791 47.826 0.00 0.00 35.76 1.90
1557 1681 1.015609 TCCTCACTCCCATAGTCCCA 58.984 55.000 0.00 0.00 35.76 4.37
1565 1689 1.008815 AGTCCATCATCCTCACTCCCA 59.991 52.381 0.00 0.00 0.00 4.37
1576 1700 4.338879 CTTCAGGTTTCCAAGTCCATCAT 58.661 43.478 0.00 0.00 0.00 2.45
1601 1725 5.731924 AGGGAGTACAAGATATCCAAGGAT 58.268 41.667 6.84 6.84 38.54 3.24
1732 1856 4.618920 AAGTAATCCGAAACTGGAGTGT 57.381 40.909 0.00 0.00 42.45 3.55
1915 2039 4.771903 GGTACCTTCTTCTTCCCATTCTC 58.228 47.826 4.06 0.00 0.00 2.87
2102 2226 1.753930 TGTCCTCCGCAATACTCGTA 58.246 50.000 0.00 0.00 0.00 3.43
2103 2227 1.067212 GATGTCCTCCGCAATACTCGT 59.933 52.381 0.00 0.00 0.00 4.18
2108 2232 2.625314 CAGAGAGATGTCCTCCGCAATA 59.375 50.000 0.00 0.00 42.97 1.90
2114 2238 2.693074 GTCTTCCAGAGAGATGTCCTCC 59.307 54.545 0.00 0.00 42.97 4.30
2151 2275 4.220821 GCCGATGAGGGAAGATATGTAGAA 59.779 45.833 0.00 0.00 41.48 2.10
2173 2297 4.419522 ACACGGTATTCTTCAAATGTGC 57.580 40.909 0.00 0.00 0.00 4.57
2180 2304 4.322198 GGTTGGAGTACACGGTATTCTTCA 60.322 45.833 0.00 0.00 0.00 3.02
2190 2314 3.123804 GCTGATATGGTTGGAGTACACG 58.876 50.000 0.00 0.00 0.00 4.49
2193 2317 5.536916 AGTCTAGCTGATATGGTTGGAGTAC 59.463 44.000 0.00 0.00 0.00 2.73
2212 2336 1.957668 TGTCGCGTATAGCCAGTCTA 58.042 50.000 5.77 0.00 44.76 2.59


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.