Multiple sequence alignment - TraesCS3D01G516400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G516400 chr3D 100.000 4494 0 0 1 4494 600171490 600175983 0.000000e+00 8299.0
1 TraesCS3D01G516400 chr3D 78.233 317 55 10 3406 3714 511944311 511944621 1.650000e-44 191.0
2 TraesCS3D01G516400 chr3B 93.629 1036 62 2 2600 3633 807352854 807353887 0.000000e+00 1544.0
3 TraesCS3D01G516400 chr3B 92.411 896 52 3 830 1712 807351114 807352006 0.000000e+00 1264.0
4 TraesCS3D01G516400 chr3B 92.900 831 30 5 1757 2558 807352018 807352848 0.000000e+00 1181.0
5 TraesCS3D01G516400 chr3B 86.483 688 56 14 3673 4357 807353886 807354539 0.000000e+00 721.0
6 TraesCS3D01G516400 chr3B 82.051 273 40 6 3416 3681 344982722 344982452 1.630000e-54 224.0
7 TraesCS3D01G516400 chr3B 88.889 153 17 0 256 408 807350883 807351035 5.930000e-44 189.0
8 TraesCS3D01G516400 chr3B 87.037 54 6 1 416 469 811497676 811497624 4.850000e-05 60.2
9 TraesCS3D01G516400 chr7D 81.063 1505 131 68 1086 2497 554336701 554335258 0.000000e+00 1059.0
10 TraesCS3D01G516400 chr7D 80.523 765 110 19 2658 3383 554335102 554334338 6.570000e-153 551.0
11 TraesCS3D01G516400 chr7D 93.640 283 18 0 494 776 616053870 616053588 1.490000e-114 424.0
12 TraesCS3D01G516400 chr7D 83.333 276 32 8 3417 3684 614177791 614178060 4.490000e-60 243.0
13 TraesCS3D01G516400 chr7D 93.333 135 9 0 102 236 454474039 454474173 2.740000e-47 200.0
14 TraesCS3D01G516400 chr7D 91.000 100 7 2 7 105 554337145 554337047 2.820000e-27 134.0
15 TraesCS3D01G516400 chr7D 100.000 38 0 0 432 469 60669523 60669486 2.240000e-08 71.3
16 TraesCS3D01G516400 chr7D 97.500 40 1 0 432 471 277746302 277746263 8.070000e-08 69.4
17 TraesCS3D01G516400 chr7D 93.333 45 3 0 432 476 529049417 529049461 2.900000e-07 67.6
18 TraesCS3D01G516400 chr7B 82.525 1299 96 58 1086 2310 600563780 600565021 0.000000e+00 1020.0
19 TraesCS3D01G516400 chr7B 79.974 774 98 28 2658 3377 600565665 600566435 6.660000e-143 518.0
20 TraesCS3D01G516400 chr7B 94.074 135 5 1 105 239 668203194 668203325 7.620000e-48 202.0
21 TraesCS3D01G516400 chr7B 89.000 100 9 2 7 105 600563333 600563431 6.100000e-24 122.0
22 TraesCS3D01G516400 chr7B 91.489 47 4 0 432 478 521580032 521580078 1.040000e-06 65.8
23 TraesCS3D01G516400 chr5D 96.113 283 11 0 494 776 528301061 528300779 3.170000e-126 462.0
24 TraesCS3D01G516400 chr5D 92.199 141 8 1 100 240 520059789 520059926 3.550000e-46 196.0
25 TraesCS3D01G516400 chr5D 91.608 143 6 3 110 252 548323882 548323746 4.590000e-45 193.0
26 TraesCS3D01G516400 chr4B 93.103 290 20 0 494 783 4525796 4526085 4.160000e-115 425.0
27 TraesCS3D01G516400 chr4B 92.440 291 22 0 490 780 90895568 90895858 2.500000e-112 416.0
28 TraesCS3D01G516400 chr4B 81.746 252 38 4 3421 3666 147325030 147325279 2.120000e-48 204.0
29 TraesCS3D01G516400 chr1D 93.031 287 20 0 492 778 349468689 349468403 1.930000e-113 420.0
30 TraesCS3D01G516400 chr5B 93.571 280 18 0 494 773 153901374 153901653 6.950000e-113 418.0
31 TraesCS3D01G516400 chr5B 79.538 303 50 10 3417 3710 317065061 317065360 5.890000e-49 206.0
32 TraesCS3D01G516400 chr5B 94.074 135 4 2 105 239 584613650 584613520 7.620000e-48 202.0
33 TraesCS3D01G516400 chr5B 78.603 229 37 3 1792 2008 9356850 9357078 1.690000e-29 141.0
34 TraesCS3D01G516400 chr2B 93.031 287 19 1 492 778 59069071 59069356 6.950000e-113 418.0
35 TraesCS3D01G516400 chr2B 80.714 280 46 5 3416 3689 794077275 794076998 1.270000e-50 211.0
36 TraesCS3D01G516400 chr1B 92.734 289 21 0 492 780 549747711 549747999 6.950000e-113 418.0
37 TraesCS3D01G516400 chr1B 93.431 137 4 3 100 236 584112849 584112980 9.860000e-47 198.0
38 TraesCS3D01G516400 chr6D 91.176 306 22 5 473 778 420715553 420715853 1.160000e-110 411.0
39 TraesCS3D01G516400 chr6D 80.952 273 42 7 3417 3681 319248560 319248830 1.640000e-49 207.0
40 TraesCS3D01G516400 chr6D 97.500 40 1 0 432 471 389141675 389141714 8.070000e-08 69.4
41 TraesCS3D01G516400 chr4D 84.170 259 29 8 3417 3668 43361585 43361838 1.620000e-59 241.0
42 TraesCS3D01G516400 chr7A 75.088 570 97 22 1792 2325 4743075 4743635 1.630000e-54 224.0
43 TraesCS3D01G516400 chr7A 90.000 50 3 2 432 480 41825782 41825734 3.750000e-06 63.9
44 TraesCS3D01G516400 chr4A 75.000 568 95 26 1795 2325 738783766 738783209 7.570000e-53 219.0
45 TraesCS3D01G516400 chr4A 73.298 573 99 28 1795 2322 605376460 605375897 1.290000e-35 161.0
46 TraesCS3D01G516400 chr2D 93.985 133 8 0 104 236 308119821 308119953 7.620000e-48 202.0
47 TraesCS3D01G516400 chr2D 94.030 134 5 1 104 237 399721333 399721463 2.740000e-47 200.0
48 TraesCS3D01G516400 chr2D 91.156 147 6 5 91 236 588500370 588500230 4.590000e-45 193.0
49 TraesCS3D01G516400 chr5A 75.654 382 66 14 1792 2149 7570115 7570493 1.000000e-36 165.0
50 TraesCS3D01G516400 chrUn 73.264 576 100 28 1792 2322 48205228 48205794 1.290000e-35 161.0
51 TraesCS3D01G516400 chr6B 78.195 133 21 6 1872 2000 37231551 37231423 1.340000e-10 78.7
52 TraesCS3D01G516400 chr6A 97.619 42 1 0 430 471 21581698 21581739 6.240000e-09 73.1
53 TraesCS3D01G516400 chr6A 97.500 40 1 0 432 471 617653850 617653811 8.070000e-08 69.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G516400 chr3D 600171490 600175983 4493 False 8299.000000 8299 100.000000 1 4494 1 chr3D.!!$F2 4493
1 TraesCS3D01G516400 chr3B 807350883 807354539 3656 False 979.800000 1544 90.862400 256 4357 5 chr3B.!!$F1 4101
2 TraesCS3D01G516400 chr7D 554334338 554337145 2807 True 581.333333 1059 84.195333 7 3383 3 chr7D.!!$R4 3376
3 TraesCS3D01G516400 chr7B 600563333 600566435 3102 False 553.333333 1020 83.833000 7 3377 3 chr7B.!!$F3 3370
4 TraesCS3D01G516400 chr7A 4743075 4743635 560 False 224.000000 224 75.088000 1792 2325 1 chr7A.!!$F1 533
5 TraesCS3D01G516400 chr4A 738783209 738783766 557 True 219.000000 219 75.000000 1795 2325 1 chr4A.!!$R2 530

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
895 943 0.393077 ACTGACATATAGCCACGCCC 59.607 55.0 0.0 0.0 0.00 6.13 F
1080 1138 0.392327 GTGAAGAGCAAGGAGGAGCC 60.392 60.0 0.0 0.0 0.00 4.70 F
2060 2157 1.052124 ACGACCTCACCACCAAGGAA 61.052 55.0 0.0 0.0 41.22 3.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1752 1819 0.025898 CATCAGTCGCGTGCTGAATG 59.974 55.0 28.62 23.2 44.82 2.67 R
2255 2403 0.032403 CGAACGGGTTGTAGTGGTCA 59.968 55.0 0.00 0.0 0.00 4.02 R
3693 4236 0.475906 AGTGCCCTTCTCAGTGCTTT 59.524 50.0 0.00 0.0 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.487714 TGGATCTTGAAGGTACCACATC 57.512 45.455 15.94 9.90 0.00 3.06
23 24 3.843619 TGGATCTTGAAGGTACCACATCA 59.156 43.478 15.94 12.48 0.00 3.07
24 25 4.192317 GGATCTTGAAGGTACCACATCAC 58.808 47.826 15.94 3.83 0.00 3.06
35 36 4.397730 GGTACCACATCACATGCAATACAA 59.602 41.667 7.15 0.00 0.00 2.41
38 39 6.040209 ACCACATCACATGCAATACAAATT 57.960 33.333 0.00 0.00 0.00 1.82
39 40 6.465948 ACCACATCACATGCAATACAAATTT 58.534 32.000 0.00 0.00 0.00 1.82
44 45 9.787532 ACATCACATGCAATACAAATTTACTAC 57.212 29.630 0.00 0.00 0.00 2.73
100 101 2.796193 ATCCGGTGATGCGCTGCTA 61.796 57.895 9.73 0.00 0.00 3.49
105 106 0.654683 GGTGATGCGCTGCTAAGAAG 59.345 55.000 9.73 0.00 0.00 2.85
106 107 1.363744 GTGATGCGCTGCTAAGAAGT 58.636 50.000 9.73 0.00 0.00 3.01
107 108 2.540515 GTGATGCGCTGCTAAGAAGTA 58.459 47.619 9.73 0.00 0.00 2.24
108 109 3.126831 GTGATGCGCTGCTAAGAAGTAT 58.873 45.455 9.73 0.00 0.00 2.12
109 110 3.557595 GTGATGCGCTGCTAAGAAGTATT 59.442 43.478 9.73 0.00 0.00 1.89
121 122 1.492764 GAAGTATTCCCTCCGTCCCA 58.507 55.000 0.00 0.00 39.83 4.37
122 123 1.835531 GAAGTATTCCCTCCGTCCCAA 59.164 52.381 0.00 0.00 39.83 4.12
123 124 1.961133 AGTATTCCCTCCGTCCCAAA 58.039 50.000 0.00 0.00 0.00 3.28
124 125 2.271777 AGTATTCCCTCCGTCCCAAAA 58.728 47.619 0.00 0.00 0.00 2.44
125 126 2.850568 AGTATTCCCTCCGTCCCAAAAT 59.149 45.455 0.00 0.00 0.00 1.82
126 127 2.919772 ATTCCCTCCGTCCCAAAATT 57.080 45.000 0.00 0.00 0.00 1.82
127 128 2.209690 TTCCCTCCGTCCCAAAATTC 57.790 50.000 0.00 0.00 0.00 2.17
128 129 1.368374 TCCCTCCGTCCCAAAATTCT 58.632 50.000 0.00 0.00 0.00 2.40
129 130 1.708551 TCCCTCCGTCCCAAAATTCTT 59.291 47.619 0.00 0.00 0.00 2.52
130 131 1.818674 CCCTCCGTCCCAAAATTCTTG 59.181 52.381 0.00 0.00 0.00 3.02
131 132 2.514803 CCTCCGTCCCAAAATTCTTGT 58.485 47.619 0.00 0.00 0.00 3.16
132 133 2.488153 CCTCCGTCCCAAAATTCTTGTC 59.512 50.000 0.00 0.00 0.00 3.18
133 134 3.412386 CTCCGTCCCAAAATTCTTGTCT 58.588 45.455 0.00 0.00 0.00 3.41
134 135 3.821033 CTCCGTCCCAAAATTCTTGTCTT 59.179 43.478 0.00 0.00 0.00 3.01
135 136 4.975631 TCCGTCCCAAAATTCTTGTCTTA 58.024 39.130 0.00 0.00 0.00 2.10
136 137 5.001232 TCCGTCCCAAAATTCTTGTCTTAG 58.999 41.667 0.00 0.00 0.00 2.18
137 138 5.001232 CCGTCCCAAAATTCTTGTCTTAGA 58.999 41.667 0.00 0.00 0.00 2.10
138 139 5.648092 CCGTCCCAAAATTCTTGTCTTAGAT 59.352 40.000 0.00 0.00 0.00 1.98
139 140 6.151144 CCGTCCCAAAATTCTTGTCTTAGATT 59.849 38.462 0.00 0.00 0.00 2.40
140 141 7.309194 CCGTCCCAAAATTCTTGTCTTAGATTT 60.309 37.037 0.00 0.00 0.00 2.17
141 142 7.538678 CGTCCCAAAATTCTTGTCTTAGATTTG 59.461 37.037 0.00 0.00 29.84 2.32
142 143 8.360390 GTCCCAAAATTCTTGTCTTAGATTTGT 58.640 33.333 0.00 0.00 28.79 2.83
143 144 8.576442 TCCCAAAATTCTTGTCTTAGATTTGTC 58.424 33.333 0.00 0.00 28.79 3.18
144 145 8.579863 CCCAAAATTCTTGTCTTAGATTTGTCT 58.420 33.333 0.00 0.00 28.79 3.41
152 153 9.582431 TCTTGTCTTAGATTTGTCTAAATACGG 57.418 33.333 0.26 0.99 36.66 4.02
153 154 9.582431 CTTGTCTTAGATTTGTCTAAATACGGA 57.418 33.333 0.26 0.00 36.66 4.69
155 156 9.529325 TGTCTTAGATTTGTCTAAATACGGATG 57.471 33.333 0.26 0.00 36.66 3.51
156 157 9.530633 GTCTTAGATTTGTCTAAATACGGATGT 57.469 33.333 0.26 0.00 36.66 3.06
163 164 9.832445 ATTTGTCTAAATACGGATGTATCAAGT 57.168 29.630 0.00 0.00 40.42 3.16
164 165 8.867112 TTGTCTAAATACGGATGTATCAAGTC 57.133 34.615 0.00 0.00 40.42 3.01
165 166 8.002984 TGTCTAAATACGGATGTATCAAGTCA 57.997 34.615 0.00 0.00 40.42 3.41
166 167 7.919091 TGTCTAAATACGGATGTATCAAGTCAC 59.081 37.037 0.00 0.00 40.42 3.67
167 168 7.113124 GTCTAAATACGGATGTATCAAGTCACG 59.887 40.741 0.00 0.00 40.42 4.35
168 169 4.913335 ATACGGATGTATCAAGTCACGT 57.087 40.909 0.00 0.00 36.56 4.49
169 170 3.587797 ACGGATGTATCAAGTCACGTT 57.412 42.857 0.00 0.00 0.00 3.99
170 171 3.921677 ACGGATGTATCAAGTCACGTTT 58.078 40.909 0.00 0.00 0.00 3.60
171 172 4.312443 ACGGATGTATCAAGTCACGTTTT 58.688 39.130 0.00 0.00 0.00 2.43
172 173 5.472148 ACGGATGTATCAAGTCACGTTTTA 58.528 37.500 0.00 0.00 0.00 1.52
173 174 5.575606 ACGGATGTATCAAGTCACGTTTTAG 59.424 40.000 0.00 0.00 0.00 1.85
174 175 5.575606 CGGATGTATCAAGTCACGTTTTAGT 59.424 40.000 0.00 0.00 0.00 2.24
175 176 6.748658 CGGATGTATCAAGTCACGTTTTAGTA 59.251 38.462 0.00 0.00 0.00 1.82
176 177 7.434307 CGGATGTATCAAGTCACGTTTTAGTAT 59.566 37.037 0.00 0.00 0.00 2.12
177 178 9.095065 GGATGTATCAAGTCACGTTTTAGTATT 57.905 33.333 0.00 0.00 0.00 1.89
180 181 9.577110 TGTATCAAGTCACGTTTTAGTATTAGG 57.423 33.333 0.00 0.00 0.00 2.69
181 182 9.578439 GTATCAAGTCACGTTTTAGTATTAGGT 57.422 33.333 0.00 0.00 0.00 3.08
183 184 8.970691 TCAAGTCACGTTTTAGTATTAGGTAC 57.029 34.615 0.00 0.00 0.00 3.34
184 185 8.575589 TCAAGTCACGTTTTAGTATTAGGTACA 58.424 33.333 0.00 0.00 35.67 2.90
185 186 9.362539 CAAGTCACGTTTTAGTATTAGGTACAT 57.637 33.333 0.00 0.00 35.67 2.29
186 187 9.578439 AAGTCACGTTTTAGTATTAGGTACATC 57.422 33.333 0.00 0.00 35.67 3.06
187 188 8.193438 AGTCACGTTTTAGTATTAGGTACATCC 58.807 37.037 0.00 0.00 35.67 3.51
188 189 7.166473 GTCACGTTTTAGTATTAGGTACATCCG 59.834 40.741 0.00 0.00 41.99 4.18
189 190 6.974622 CACGTTTTAGTATTAGGTACATCCGT 59.025 38.462 0.00 0.00 41.99 4.69
190 191 8.128582 CACGTTTTAGTATTAGGTACATCCGTA 58.871 37.037 0.00 0.00 41.99 4.02
191 192 8.850156 ACGTTTTAGTATTAGGTACATCCGTAT 58.150 33.333 0.00 0.00 41.99 3.06
192 193 9.334693 CGTTTTAGTATTAGGTACATCCGTATC 57.665 37.037 0.00 0.00 41.99 2.24
226 227 9.463443 AAAATCTAAGACAAGAATTTTTGGACG 57.537 29.630 12.83 0.00 26.56 4.79
227 228 6.554334 TCTAAGACAAGAATTTTTGGACGG 57.446 37.500 12.83 0.70 32.32 4.79
228 229 6.292923 TCTAAGACAAGAATTTTTGGACGGA 58.707 36.000 12.83 2.72 32.32 4.69
229 230 5.438761 AAGACAAGAATTTTTGGACGGAG 57.561 39.130 12.83 0.00 32.32 4.63
230 231 3.821033 AGACAAGAATTTTTGGACGGAGG 59.179 43.478 12.83 0.00 32.32 4.30
231 232 2.890945 ACAAGAATTTTTGGACGGAGGG 59.109 45.455 12.83 0.00 32.32 4.30
241 242 1.320507 GGACGGAGGGAGTAGATGAC 58.679 60.000 0.00 0.00 0.00 3.06
306 307 8.301252 TGATTCATGATGACAATGATTTTCCT 57.699 30.769 0.00 0.00 0.00 3.36
332 334 1.208293 CGAAGAGGAAAGAAGAGGGGG 59.792 57.143 0.00 0.00 0.00 5.40
357 363 3.422417 TTTGGAAACGAATTTGCGTCA 57.578 38.095 0.00 0.00 44.86 4.35
373 387 3.244670 CGTCATTCGCTCCATTTGATC 57.755 47.619 0.00 0.00 0.00 2.92
374 388 2.609002 CGTCATTCGCTCCATTTGATCA 59.391 45.455 0.00 0.00 0.00 2.92
458 503 9.736023 ACAAAGTTGAATCACTTATTTTGAGAC 57.264 29.630 7.92 0.00 35.87 3.36
460 505 7.133891 AGTTGAATCACTTATTTTGAGACGG 57.866 36.000 0.00 0.00 0.00 4.79
464 509 4.202245 TCACTTATTTTGAGACGGAGGG 57.798 45.455 0.00 0.00 0.00 4.30
466 511 4.081642 TCACTTATTTTGAGACGGAGGGAG 60.082 45.833 0.00 0.00 0.00 4.30
498 546 7.996098 TTCATAATAGCTAAATGTTAGGCCC 57.004 36.000 15.36 0.00 0.00 5.80
499 547 7.329746 TCATAATAGCTAAATGTTAGGCCCT 57.670 36.000 15.36 0.00 0.00 5.19
500 548 8.444010 TCATAATAGCTAAATGTTAGGCCCTA 57.556 34.615 15.36 0.00 0.00 3.53
501 549 9.057911 TCATAATAGCTAAATGTTAGGCCCTAT 57.942 33.333 15.36 0.00 0.00 2.57
502 550 9.686683 CATAATAGCTAAATGTTAGGCCCTATT 57.313 33.333 0.00 4.02 0.00 1.73
504 552 8.409358 AATAGCTAAATGTTAGGCCCTATTTG 57.591 34.615 0.00 0.00 0.00 2.32
505 553 5.140454 AGCTAAATGTTAGGCCCTATTTGG 58.860 41.667 0.00 4.96 0.00 3.28
506 554 4.893524 GCTAAATGTTAGGCCCTATTTGGT 59.106 41.667 0.00 0.00 0.00 3.67
507 555 5.362717 GCTAAATGTTAGGCCCTATTTGGTT 59.637 40.000 0.00 0.00 0.00 3.67
508 556 5.932619 AAATGTTAGGCCCTATTTGGTTC 57.067 39.130 0.00 0.00 0.00 3.62
509 557 4.601406 ATGTTAGGCCCTATTTGGTTCA 57.399 40.909 0.00 0.00 0.00 3.18
510 558 4.601406 TGTTAGGCCCTATTTGGTTCAT 57.399 40.909 0.00 0.00 0.00 2.57
511 559 5.718801 TGTTAGGCCCTATTTGGTTCATA 57.281 39.130 0.00 0.00 0.00 2.15
512 560 6.080969 TGTTAGGCCCTATTTGGTTCATAA 57.919 37.500 0.00 0.00 0.00 1.90
513 561 6.126409 TGTTAGGCCCTATTTGGTTCATAAG 58.874 40.000 0.00 0.00 0.00 1.73
514 562 4.881157 AGGCCCTATTTGGTTCATAAGT 57.119 40.909 0.00 0.00 0.00 2.24
515 563 4.793201 AGGCCCTATTTGGTTCATAAGTC 58.207 43.478 0.00 0.00 0.00 3.01
516 564 4.478686 AGGCCCTATTTGGTTCATAAGTCT 59.521 41.667 0.00 0.00 0.00 3.24
517 565 5.044105 AGGCCCTATTTGGTTCATAAGTCTT 60.044 40.000 0.00 0.00 0.00 3.01
518 566 6.159751 AGGCCCTATTTGGTTCATAAGTCTTA 59.840 38.462 0.00 0.00 0.00 2.10
519 567 6.262496 GGCCCTATTTGGTTCATAAGTCTTAC 59.738 42.308 0.00 0.00 0.00 2.34
520 568 6.018180 GCCCTATTTGGTTCATAAGTCTTACG 60.018 42.308 0.00 0.00 0.00 3.18
521 569 7.270047 CCCTATTTGGTTCATAAGTCTTACGA 58.730 38.462 0.00 0.00 0.00 3.43
522 570 7.931948 CCCTATTTGGTTCATAAGTCTTACGAT 59.068 37.037 0.00 0.00 0.00 3.73
523 571 9.326413 CCTATTTGGTTCATAAGTCTTACGATT 57.674 33.333 0.00 0.00 0.00 3.34
553 601 8.906238 TTAGTCCCAACTTATAAGTCCTAAGT 57.094 34.615 18.28 10.08 40.30 2.24
554 602 7.421087 AGTCCCAACTTATAAGTCCTAAGTC 57.579 40.000 18.28 6.78 38.22 3.01
555 603 6.383436 AGTCCCAACTTATAAGTCCTAAGTCC 59.617 42.308 18.28 3.21 38.22 3.85
556 604 5.664457 TCCCAACTTATAAGTCCTAAGTCCC 59.336 44.000 18.28 0.00 38.22 4.46
557 605 5.666265 CCCAACTTATAAGTCCTAAGTCCCT 59.334 44.000 18.28 0.00 38.22 4.20
558 606 6.842807 CCCAACTTATAAGTCCTAAGTCCCTA 59.157 42.308 18.28 0.00 38.22 3.53
559 607 7.346436 CCCAACTTATAAGTCCTAAGTCCCTAA 59.654 40.741 18.28 0.00 38.22 2.69
560 608 8.765517 CCAACTTATAAGTCCTAAGTCCCTAAA 58.234 37.037 18.28 0.00 38.22 1.85
566 614 8.682297 ATAAGTCCTAAGTCCCTAAAAAGTCT 57.318 34.615 0.00 0.00 0.00 3.24
567 615 6.608539 AGTCCTAAGTCCCTAAAAAGTCTC 57.391 41.667 0.00 0.00 0.00 3.36
568 616 6.324544 AGTCCTAAGTCCCTAAAAAGTCTCT 58.675 40.000 0.00 0.00 0.00 3.10
569 617 7.477008 AGTCCTAAGTCCCTAAAAAGTCTCTA 58.523 38.462 0.00 0.00 0.00 2.43
570 618 7.396907 AGTCCTAAGTCCCTAAAAAGTCTCTAC 59.603 40.741 0.00 0.00 0.00 2.59
571 619 6.666980 TCCTAAGTCCCTAAAAAGTCTCTACC 59.333 42.308 0.00 0.00 0.00 3.18
572 620 6.668718 CCTAAGTCCCTAAAAAGTCTCTACCT 59.331 42.308 0.00 0.00 0.00 3.08
573 621 6.361768 AAGTCCCTAAAAAGTCTCTACCTG 57.638 41.667 0.00 0.00 0.00 4.00
574 622 5.404395 AGTCCCTAAAAAGTCTCTACCTGT 58.596 41.667 0.00 0.00 0.00 4.00
575 623 5.845065 AGTCCCTAAAAAGTCTCTACCTGTT 59.155 40.000 0.00 0.00 0.00 3.16
576 624 6.329460 AGTCCCTAAAAAGTCTCTACCTGTTT 59.671 38.462 0.00 0.00 0.00 2.83
577 625 6.427242 GTCCCTAAAAAGTCTCTACCTGTTTG 59.573 42.308 0.00 0.00 0.00 2.93
578 626 5.705905 CCCTAAAAAGTCTCTACCTGTTTGG 59.294 44.000 0.00 0.00 42.93 3.28
587 635 4.473643 CCTGTTTGGTTCCTGCGA 57.526 55.556 0.00 0.00 0.00 5.10
588 636 1.949257 CCTGTTTGGTTCCTGCGAC 59.051 57.895 0.00 0.00 0.00 5.19
589 637 0.535102 CCTGTTTGGTTCCTGCGACT 60.535 55.000 0.00 0.00 0.00 4.18
590 638 1.308998 CTGTTTGGTTCCTGCGACTT 58.691 50.000 0.00 0.00 0.00 3.01
591 639 2.489971 CTGTTTGGTTCCTGCGACTTA 58.510 47.619 0.00 0.00 0.00 2.24
592 640 2.875933 CTGTTTGGTTCCTGCGACTTAA 59.124 45.455 0.00 0.00 0.00 1.85
593 641 2.614983 TGTTTGGTTCCTGCGACTTAAC 59.385 45.455 0.00 0.00 0.00 2.01
594 642 2.614983 GTTTGGTTCCTGCGACTTAACA 59.385 45.455 0.00 0.00 0.00 2.41
595 643 2.851263 TGGTTCCTGCGACTTAACAT 57.149 45.000 0.00 0.00 0.00 2.71
596 644 2.422597 TGGTTCCTGCGACTTAACATG 58.577 47.619 0.00 0.00 0.00 3.21
597 645 1.737793 GGTTCCTGCGACTTAACATGG 59.262 52.381 0.00 0.00 0.00 3.66
598 646 2.614481 GGTTCCTGCGACTTAACATGGA 60.614 50.000 0.00 0.00 0.00 3.41
599 647 2.380084 TCCTGCGACTTAACATGGAC 57.620 50.000 0.00 0.00 0.00 4.02
600 648 1.899814 TCCTGCGACTTAACATGGACT 59.100 47.619 0.00 0.00 0.00 3.85
601 649 3.093814 TCCTGCGACTTAACATGGACTA 58.906 45.455 0.00 0.00 0.00 2.59
602 650 3.512329 TCCTGCGACTTAACATGGACTAA 59.488 43.478 0.00 0.00 0.00 2.24
603 651 4.020928 TCCTGCGACTTAACATGGACTAAA 60.021 41.667 0.00 0.00 0.00 1.85
604 652 4.693566 CCTGCGACTTAACATGGACTAAAA 59.306 41.667 0.00 0.00 0.00 1.52
605 653 5.163854 CCTGCGACTTAACATGGACTAAAAG 60.164 44.000 0.00 0.00 0.00 2.27
606 654 5.543714 TGCGACTTAACATGGACTAAAAGA 58.456 37.500 0.00 0.00 0.00 2.52
607 655 5.407387 TGCGACTTAACATGGACTAAAAGAC 59.593 40.000 0.00 0.00 0.00 3.01
608 656 5.163884 GCGACTTAACATGGACTAAAAGACC 60.164 44.000 0.00 0.00 0.00 3.85
609 657 5.929992 CGACTTAACATGGACTAAAAGACCA 59.070 40.000 0.00 0.74 43.65 4.02
611 659 7.762615 CGACTTAACATGGACTAAAAGACCATA 59.237 37.037 9.96 0.00 46.31 2.74
612 660 9.614792 GACTTAACATGGACTAAAAGACCATAT 57.385 33.333 9.96 6.06 46.31 1.78
613 661 9.975218 ACTTAACATGGACTAAAAGACCATATT 57.025 29.630 9.96 8.42 46.31 1.28
617 665 9.747898 AACATGGACTAAAAGACCATATTACAA 57.252 29.630 9.96 0.00 46.31 2.41
618 666 9.174166 ACATGGACTAAAAGACCATATTACAAC 57.826 33.333 9.96 0.00 46.31 3.32
619 667 9.396022 CATGGACTAAAAGACCATATTACAACT 57.604 33.333 9.96 0.00 46.31 3.16
629 677 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
640 688 9.577222 ACAACTATAAGTCCCTATAAGACTCTC 57.423 37.037 5.74 0.00 43.77 3.20
641 689 9.016438 CAACTATAAGTCCCTATAAGACTCTCC 57.984 40.741 5.74 0.00 43.77 3.71
642 690 8.528543 ACTATAAGTCCCTATAAGACTCTCCT 57.471 38.462 5.74 0.00 43.77 3.69
643 691 8.962205 ACTATAAGTCCCTATAAGACTCTCCTT 58.038 37.037 5.74 0.00 43.77 3.36
644 692 9.238368 CTATAAGTCCCTATAAGACTCTCCTTG 57.762 40.741 5.74 0.00 43.77 3.61
645 693 5.735733 AGTCCCTATAAGACTCTCCTTGA 57.264 43.478 0.24 0.00 40.61 3.02
646 694 6.093617 AGTCCCTATAAGACTCTCCTTGAA 57.906 41.667 0.24 0.00 40.61 2.69
647 695 6.503944 AGTCCCTATAAGACTCTCCTTGAAA 58.496 40.000 0.24 0.00 40.61 2.69
648 696 6.609616 AGTCCCTATAAGACTCTCCTTGAAAG 59.390 42.308 0.24 0.00 40.61 2.62
649 697 6.381707 GTCCCTATAAGACTCTCCTTGAAAGT 59.618 42.308 0.00 0.00 0.00 2.66
650 698 6.608002 TCCCTATAAGACTCTCCTTGAAAGTC 59.392 42.308 0.00 0.00 39.76 3.01
675 723 9.983024 TCTTATTTTATAAGTCCCAAATGTCCA 57.017 29.630 6.39 0.00 0.00 4.02
677 725 9.762381 TTATTTTATAAGTCCCAAATGTCCACT 57.238 29.630 0.00 0.00 0.00 4.00
678 726 8.664669 ATTTTATAAGTCCCAAATGTCCACTT 57.335 30.769 0.00 0.00 0.00 3.16
679 727 8.485578 TTTTATAAGTCCCAAATGTCCACTTT 57.514 30.769 0.00 0.00 0.00 2.66
680 728 9.589461 TTTTATAAGTCCCAAATGTCCACTTTA 57.411 29.630 0.00 0.00 0.00 1.85
681 729 9.589461 TTTATAAGTCCCAAATGTCCACTTTAA 57.411 29.630 0.00 0.00 0.00 1.52
682 730 7.703058 ATAAGTCCCAAATGTCCACTTTAAG 57.297 36.000 0.00 0.00 0.00 1.85
683 731 5.061721 AGTCCCAAATGTCCACTTTAAGT 57.938 39.130 0.00 0.00 0.00 2.24
684 732 5.070685 AGTCCCAAATGTCCACTTTAAGTC 58.929 41.667 0.00 0.00 0.00 3.01
685 733 4.217767 GTCCCAAATGTCCACTTTAAGTCC 59.782 45.833 0.00 0.00 0.00 3.85
686 734 3.509967 CCCAAATGTCCACTTTAAGTCCC 59.490 47.826 0.00 0.00 0.00 4.46
687 735 4.407365 CCAAATGTCCACTTTAAGTCCCT 58.593 43.478 0.00 0.00 0.00 4.20
688 736 5.515886 CCCAAATGTCCACTTTAAGTCCCTA 60.516 44.000 0.00 0.00 0.00 3.53
689 737 6.187682 CCAAATGTCCACTTTAAGTCCCTAT 58.812 40.000 0.00 0.00 0.00 2.57
690 738 7.343357 CCAAATGTCCACTTTAAGTCCCTATA 58.657 38.462 0.00 0.00 0.00 1.31
691 739 7.832187 CCAAATGTCCACTTTAAGTCCCTATAA 59.168 37.037 0.00 0.00 0.00 0.98
692 740 8.893727 CAAATGTCCACTTTAAGTCCCTATAAG 58.106 37.037 0.00 0.00 0.00 1.73
693 741 5.985911 TGTCCACTTTAAGTCCCTATAAGC 58.014 41.667 0.00 0.00 0.00 3.09
694 742 5.104652 TGTCCACTTTAAGTCCCTATAAGCC 60.105 44.000 0.00 0.00 0.00 4.35
695 743 4.411212 TCCACTTTAAGTCCCTATAAGCCC 59.589 45.833 0.00 0.00 0.00 5.19
696 744 4.445879 CCACTTTAAGTCCCTATAAGCCCC 60.446 50.000 0.00 0.00 0.00 5.80
697 745 4.412528 CACTTTAAGTCCCTATAAGCCCCT 59.587 45.833 0.00 0.00 0.00 4.79
698 746 4.659368 ACTTTAAGTCCCTATAAGCCCCTC 59.341 45.833 0.00 0.00 0.00 4.30
699 747 2.889522 AAGTCCCTATAAGCCCCTCA 57.110 50.000 0.00 0.00 0.00 3.86
700 748 3.368921 AAGTCCCTATAAGCCCCTCAT 57.631 47.619 0.00 0.00 0.00 2.90
701 749 2.625639 AGTCCCTATAAGCCCCTCATG 58.374 52.381 0.00 0.00 0.00 3.07
702 750 2.089925 AGTCCCTATAAGCCCCTCATGT 60.090 50.000 0.00 0.00 0.00 3.21
703 751 2.711547 GTCCCTATAAGCCCCTCATGTT 59.288 50.000 0.00 0.00 0.00 2.71
704 752 3.138468 GTCCCTATAAGCCCCTCATGTTT 59.862 47.826 0.00 0.00 0.00 2.83
705 753 3.138283 TCCCTATAAGCCCCTCATGTTTG 59.862 47.826 0.00 0.00 0.00 2.93
706 754 3.490348 CCTATAAGCCCCTCATGTTTGG 58.510 50.000 0.00 0.00 0.00 3.28
707 755 3.117512 CCTATAAGCCCCTCATGTTTGGT 60.118 47.826 0.00 0.00 0.00 3.67
708 756 2.990740 TAAGCCCCTCATGTTTGGTT 57.009 45.000 0.00 0.00 0.00 3.67
709 757 2.101640 AAGCCCCTCATGTTTGGTTT 57.898 45.000 0.00 0.00 0.00 3.27
710 758 2.990740 AGCCCCTCATGTTTGGTTTA 57.009 45.000 0.00 0.00 0.00 2.01
711 759 2.807676 AGCCCCTCATGTTTGGTTTAG 58.192 47.619 0.00 0.00 0.00 1.85
712 760 2.378547 AGCCCCTCATGTTTGGTTTAGA 59.621 45.455 0.00 0.00 0.00 2.10
713 761 3.011708 AGCCCCTCATGTTTGGTTTAGAT 59.988 43.478 0.00 0.00 0.00 1.98
714 762 3.131046 GCCCCTCATGTTTGGTTTAGATG 59.869 47.826 0.00 0.00 0.00 2.90
715 763 3.701040 CCCCTCATGTTTGGTTTAGATGG 59.299 47.826 0.00 0.00 0.00 3.51
716 764 3.701040 CCCTCATGTTTGGTTTAGATGGG 59.299 47.826 0.00 0.00 0.00 4.00
717 765 4.569653 CCCTCATGTTTGGTTTAGATGGGA 60.570 45.833 0.00 0.00 31.98 4.37
718 766 4.399303 CCTCATGTTTGGTTTAGATGGGAC 59.601 45.833 0.00 0.00 0.00 4.46
719 767 5.255397 TCATGTTTGGTTTAGATGGGACT 57.745 39.130 0.00 0.00 0.00 3.85
720 768 5.640147 TCATGTTTGGTTTAGATGGGACTT 58.360 37.500 0.00 0.00 0.00 3.01
721 769 6.785076 TCATGTTTGGTTTAGATGGGACTTA 58.215 36.000 0.00 0.00 0.00 2.24
722 770 7.235079 TCATGTTTGGTTTAGATGGGACTTAA 58.765 34.615 0.00 0.00 0.00 1.85
723 771 7.726291 TCATGTTTGGTTTAGATGGGACTTAAA 59.274 33.333 0.00 0.00 0.00 1.52
724 772 7.279750 TGTTTGGTTTAGATGGGACTTAAAC 57.720 36.000 0.00 0.00 0.00 2.01
725 773 6.016943 TGTTTGGTTTAGATGGGACTTAAACG 60.017 38.462 0.00 0.00 33.01 3.60
726 774 4.581868 TGGTTTAGATGGGACTTAAACGG 58.418 43.478 0.00 0.00 33.01 4.44
727 775 4.286549 TGGTTTAGATGGGACTTAAACGGA 59.713 41.667 0.00 0.00 33.01 4.69
728 776 4.633126 GGTTTAGATGGGACTTAAACGGAC 59.367 45.833 0.00 0.00 33.01 4.79
729 777 5.485620 GTTTAGATGGGACTTAAACGGACT 58.514 41.667 0.00 0.00 0.00 3.85
730 778 5.750352 TTAGATGGGACTTAAACGGACTT 57.250 39.130 0.00 0.00 0.00 3.01
731 779 4.635699 AGATGGGACTTAAACGGACTTT 57.364 40.909 0.00 0.00 0.00 2.66
732 780 4.981812 AGATGGGACTTAAACGGACTTTT 58.018 39.130 0.00 0.00 0.00 2.27
733 781 5.382616 AGATGGGACTTAAACGGACTTTTT 58.617 37.500 0.00 0.00 0.00 1.94
753 801 6.658188 TTTTTAAGTCCCCACACCAATAAG 57.342 37.500 0.00 0.00 0.00 1.73
754 802 5.327737 TTTAAGTCCCCACACCAATAAGT 57.672 39.130 0.00 0.00 0.00 2.24
755 803 3.434940 AAGTCCCCACACCAATAAGTC 57.565 47.619 0.00 0.00 0.00 3.01
756 804 1.633945 AGTCCCCACACCAATAAGTCC 59.366 52.381 0.00 0.00 0.00 3.85
757 805 0.996583 TCCCCACACCAATAAGTCCC 59.003 55.000 0.00 0.00 0.00 4.46
758 806 0.999712 CCCCACACCAATAAGTCCCT 59.000 55.000 0.00 0.00 0.00 4.20
759 807 1.340991 CCCCACACCAATAAGTCCCTG 60.341 57.143 0.00 0.00 0.00 4.45
760 808 1.354368 CCCACACCAATAAGTCCCTGT 59.646 52.381 0.00 0.00 0.00 4.00
761 809 2.574369 CCCACACCAATAAGTCCCTGTA 59.426 50.000 0.00 0.00 0.00 2.74
762 810 3.009695 CCCACACCAATAAGTCCCTGTAA 59.990 47.826 0.00 0.00 0.00 2.41
763 811 4.007659 CCACACCAATAAGTCCCTGTAAC 58.992 47.826 0.00 0.00 0.00 2.50
764 812 4.007659 CACACCAATAAGTCCCTGTAACC 58.992 47.826 0.00 0.00 0.00 2.85
765 813 3.653836 ACACCAATAAGTCCCTGTAACCA 59.346 43.478 0.00 0.00 0.00 3.67
766 814 4.105057 ACACCAATAAGTCCCTGTAACCAA 59.895 41.667 0.00 0.00 0.00 3.67
767 815 5.074115 CACCAATAAGTCCCTGTAACCAAA 58.926 41.667 0.00 0.00 0.00 3.28
768 816 5.048294 CACCAATAAGTCCCTGTAACCAAAC 60.048 44.000 0.00 0.00 0.00 2.93
769 817 5.074115 CCAATAAGTCCCTGTAACCAAACA 58.926 41.667 0.00 0.00 0.00 2.83
770 818 5.048294 CCAATAAGTCCCTGTAACCAAACAC 60.048 44.000 0.00 0.00 0.00 3.32
771 819 2.651382 AGTCCCTGTAACCAAACACC 57.349 50.000 0.00 0.00 0.00 4.16
772 820 1.144298 AGTCCCTGTAACCAAACACCC 59.856 52.381 0.00 0.00 0.00 4.61
773 821 1.144298 GTCCCTGTAACCAAACACCCT 59.856 52.381 0.00 0.00 0.00 4.34
774 822 1.422402 TCCCTGTAACCAAACACCCTC 59.578 52.381 0.00 0.00 0.00 4.30
775 823 1.423921 CCCTGTAACCAAACACCCTCT 59.576 52.381 0.00 0.00 0.00 3.69
776 824 2.158519 CCCTGTAACCAAACACCCTCTT 60.159 50.000 0.00 0.00 0.00 2.85
777 825 3.073356 CCCTGTAACCAAACACCCTCTTA 59.927 47.826 0.00 0.00 0.00 2.10
778 826 4.324267 CCTGTAACCAAACACCCTCTTAG 58.676 47.826 0.00 0.00 0.00 2.18
779 827 4.202430 CCTGTAACCAAACACCCTCTTAGT 60.202 45.833 0.00 0.00 0.00 2.24
780 828 4.964593 TGTAACCAAACACCCTCTTAGTC 58.035 43.478 0.00 0.00 0.00 2.59
781 829 2.833631 ACCAAACACCCTCTTAGTCG 57.166 50.000 0.00 0.00 0.00 4.18
782 830 2.322658 ACCAAACACCCTCTTAGTCGA 58.677 47.619 0.00 0.00 0.00 4.20
783 831 2.036862 ACCAAACACCCTCTTAGTCGAC 59.963 50.000 7.70 7.70 0.00 4.20
784 832 2.299297 CCAAACACCCTCTTAGTCGACT 59.701 50.000 23.66 23.66 0.00 4.18
785 833 3.318017 CAAACACCCTCTTAGTCGACTG 58.682 50.000 28.12 12.46 0.00 3.51
786 834 2.581216 ACACCCTCTTAGTCGACTGA 57.419 50.000 28.12 19.13 0.00 3.41
787 835 2.161030 ACACCCTCTTAGTCGACTGAC 58.839 52.381 28.12 0.00 45.86 3.51
800 848 5.688348 GTCGACTGACTTTAGCTATTGTG 57.312 43.478 8.70 0.00 42.08 3.33
801 849 4.563184 GTCGACTGACTTTAGCTATTGTGG 59.437 45.833 8.70 0.00 42.08 4.17
802 850 4.219944 TCGACTGACTTTAGCTATTGTGGT 59.780 41.667 0.00 0.00 0.00 4.16
803 851 4.327357 CGACTGACTTTAGCTATTGTGGTG 59.673 45.833 0.00 0.00 0.00 4.17
804 852 5.479306 GACTGACTTTAGCTATTGTGGTGA 58.521 41.667 0.00 0.00 0.00 4.02
805 853 5.482908 ACTGACTTTAGCTATTGTGGTGAG 58.517 41.667 0.00 0.00 0.00 3.51
806 854 5.012148 ACTGACTTTAGCTATTGTGGTGAGT 59.988 40.000 0.00 0.00 0.00 3.41
807 855 5.865085 TGACTTTAGCTATTGTGGTGAGTT 58.135 37.500 0.00 0.00 0.00 3.01
812 860 7.448469 ACTTTAGCTATTGTGGTGAGTTGATTT 59.552 33.333 0.00 0.00 0.00 2.17
813 861 7.759489 TTAGCTATTGTGGTGAGTTGATTTT 57.241 32.000 0.00 0.00 0.00 1.82
816 864 6.265196 AGCTATTGTGGTGAGTTGATTTTGAA 59.735 34.615 0.00 0.00 0.00 2.69
819 867 3.636300 TGTGGTGAGTTGATTTTGAAGGG 59.364 43.478 0.00 0.00 0.00 3.95
821 869 4.022849 GTGGTGAGTTGATTTTGAAGGGAG 60.023 45.833 0.00 0.00 0.00 4.30
825 873 5.301805 GTGAGTTGATTTTGAAGGGAGGAAA 59.698 40.000 0.00 0.00 0.00 3.13
827 875 4.281941 AGTTGATTTTGAAGGGAGGAAAGC 59.718 41.667 0.00 0.00 0.00 3.51
828 876 3.843422 TGATTTTGAAGGGAGGAAAGCA 58.157 40.909 0.00 0.00 0.00 3.91
839 887 1.815613 GAGGAAAGCAAAGGAAGGCTC 59.184 52.381 0.00 0.00 40.01 4.70
895 943 0.393077 ACTGACATATAGCCACGCCC 59.607 55.000 0.00 0.00 0.00 6.13
896 944 0.681733 CTGACATATAGCCACGCCCT 59.318 55.000 0.00 0.00 0.00 5.19
916 964 6.715264 CGCCCTAATTAATTAAGGGAGATGTT 59.285 38.462 28.81 3.89 41.24 2.71
922 970 6.677781 TTAATTAAGGGAGATGTTGAAGCG 57.322 37.500 0.00 0.00 0.00 4.68
960 1018 2.887568 GCAGTCATCCGAGCACCG 60.888 66.667 0.00 0.00 38.18 4.94
971 1029 0.655733 CGAGCACCGAAACACAAACT 59.344 50.000 0.00 0.00 41.76 2.66
982 1040 5.164100 CCGAAACACAAACTCAAACACAAAG 60.164 40.000 0.00 0.00 0.00 2.77
995 1053 5.009610 TCAAACACAAAGCCCAAGAAGTATC 59.990 40.000 0.00 0.00 0.00 2.24
1015 1073 4.849813 TCCATCATGAGAGACCACAAAT 57.150 40.909 0.09 0.00 0.00 2.32
1076 1134 1.349026 TGAAGGTGAAGAGCAAGGAGG 59.651 52.381 0.00 0.00 0.00 4.30
1080 1138 0.392327 GTGAAGAGCAAGGAGGAGCC 60.392 60.000 0.00 0.00 0.00 4.70
1369 1430 2.599281 TCACCGCCCTCGTCTTCA 60.599 61.111 0.00 0.00 0.00 3.02
1433 1497 2.892334 GCGCCGCAGACAACAAGAA 61.892 57.895 3.15 0.00 0.00 2.52
1507 1571 2.490270 AATGGAGGACAGTGGCTGCC 62.490 60.000 12.87 12.87 34.37 4.85
1712 1779 9.760077 TGCTCTCTCATATCGTATTCGTATATA 57.240 33.333 0.00 0.00 38.33 0.86
2060 2157 1.052124 ACGACCTCACCACCAAGGAA 61.052 55.000 0.00 0.00 41.22 3.36
2081 2190 1.553690 CCGTCAAGGTGACCCCTGAT 61.554 60.000 7.22 0.00 45.47 2.90
2082 2191 1.191535 CGTCAAGGTGACCCCTGATA 58.808 55.000 7.22 0.00 45.47 2.15
2363 2511 2.652590 GCTGATCCCAAGAAGAAGCAT 58.347 47.619 0.00 0.00 0.00 3.79
2589 2985 9.995957 CTATCTATCTATCTACAACAATCGGTG 57.004 37.037 0.00 0.00 0.00 4.94
2590 2986 7.818997 TCTATCTATCTACAACAATCGGTGT 57.181 36.000 0.00 0.00 44.64 4.16
2594 2990 7.342769 TCTATCTACAACAATCGGTGTGTAT 57.657 36.000 0.00 0.00 40.60 2.29
2595 2991 7.200455 TCTATCTACAACAATCGGTGTGTATG 58.800 38.462 0.00 0.00 40.60 2.39
2596 2992 5.394224 TCTACAACAATCGGTGTGTATGA 57.606 39.130 0.00 0.00 40.60 2.15
2794 3287 2.920912 AACGACGCCTTCCCCTCA 60.921 61.111 0.00 0.00 0.00 3.86
2896 3389 1.683385 CTCTACATCATGGAGGACGCA 59.317 52.381 0.00 0.00 32.30 5.24
2914 3407 3.412408 GAGGAAGGGGAGTGGGGC 61.412 72.222 0.00 0.00 0.00 5.80
2962 3467 3.402681 CCCTGGACCGACAGCCAT 61.403 66.667 0.00 0.00 37.16 4.40
3007 3512 0.033894 GGGTCGTCTTCTCCTCCTCT 60.034 60.000 0.00 0.00 0.00 3.69
3010 3515 0.614294 TCGTCTTCTCCTCCTCTCGT 59.386 55.000 0.00 0.00 0.00 4.18
3016 3542 3.712218 TCTTCTCCTCCTCTCGTGATAGA 59.288 47.826 0.00 0.00 0.00 1.98
3023 3549 3.394719 TCCTCTCGTGATAGAGACATCG 58.605 50.000 2.47 0.00 44.93 3.84
3103 3644 3.716195 CGGGTCATGTCCCTGGCA 61.716 66.667 23.30 0.00 44.95 4.92
3169 3710 2.963371 GTCACCTCCGACTTCGCT 59.037 61.111 0.00 0.00 38.18 4.93
3217 3758 1.683011 CCCATCTTCATTGCCTCCGTT 60.683 52.381 0.00 0.00 0.00 4.44
3260 3801 3.659786 TCCATTAAACTCCGTGACACAG 58.340 45.455 6.37 0.00 0.00 3.66
3262 3803 2.605837 TTAAACTCCGTGACACAGCA 57.394 45.000 6.37 0.00 0.00 4.41
3287 3828 4.214119 ACATCAACAAGAACAAGGACATCG 59.786 41.667 0.00 0.00 0.00 3.84
3314 3855 1.597854 CACCGCATCACACACACCT 60.598 57.895 0.00 0.00 0.00 4.00
3334 3875 1.104630 GCTACGAGTACTCCAAGCCT 58.895 55.000 24.07 3.88 31.44 4.58
3337 3878 2.211250 ACGAGTACTCCAAGCCTACA 57.789 50.000 17.23 0.00 0.00 2.74
3393 3934 2.489751 GCCAACCAATAGCGGTGC 59.510 61.111 0.00 0.00 39.95 5.01
3452 3993 1.278127 GGTGCTTAGGTGAGGTGCTAA 59.722 52.381 0.00 0.00 0.00 3.09
3475 4016 4.058817 GTGCACTACAAGTCTTAGCAACT 58.941 43.478 10.32 0.00 27.50 3.16
3484 4025 5.485708 ACAAGTCTTAGCAACTAATCTCCCT 59.514 40.000 0.00 0.00 0.00 4.20
3529 4070 7.447374 TTGTAGCTAAGCTGCTTTCATTTTA 57.553 32.000 21.29 0.00 41.66 1.52
3588 4131 4.157656 GCATTTTGTAGGTCCACATGCTTA 59.842 41.667 0.00 0.00 32.30 3.09
3605 4148 6.857964 ACATGCTTAACATTGTTTCTTCTTCG 59.142 34.615 7.45 0.00 36.64 3.79
3624 4167 1.066573 CGGATCACCAAAGTGCTCTCT 60.067 52.381 0.00 0.00 44.16 3.10
3626 4169 3.368427 CGGATCACCAAAGTGCTCTCTTA 60.368 47.826 0.00 0.00 44.16 2.10
3627 4170 4.681781 CGGATCACCAAAGTGCTCTCTTAT 60.682 45.833 0.00 0.00 44.16 1.73
3629 4172 3.849911 TCACCAAAGTGCTCTCTTATCG 58.150 45.455 0.00 0.00 44.16 2.92
3630 4173 2.349886 CACCAAAGTGCTCTCTTATCGC 59.650 50.000 0.00 0.00 37.14 4.58
3631 4174 2.234908 ACCAAAGTGCTCTCTTATCGCT 59.765 45.455 0.00 0.00 0.00 4.93
3632 4175 3.265791 CCAAAGTGCTCTCTTATCGCTT 58.734 45.455 0.00 0.00 32.58 4.68
3633 4176 3.686726 CCAAAGTGCTCTCTTATCGCTTT 59.313 43.478 0.00 0.00 40.05 3.51
3634 4177 4.870426 CCAAAGTGCTCTCTTATCGCTTTA 59.130 41.667 0.00 0.00 38.15 1.85
3635 4178 5.351465 CCAAAGTGCTCTCTTATCGCTTTAA 59.649 40.000 0.00 0.00 38.15 1.52
3636 4179 6.037610 CCAAAGTGCTCTCTTATCGCTTTAAT 59.962 38.462 0.00 0.00 38.15 1.40
3637 4180 7.414540 CCAAAGTGCTCTCTTATCGCTTTAATT 60.415 37.037 0.00 0.00 38.15 1.40
3638 4181 8.604035 CAAAGTGCTCTCTTATCGCTTTAATTA 58.396 33.333 0.00 0.00 38.15 1.40
3639 4182 7.701809 AGTGCTCTCTTATCGCTTTAATTAC 57.298 36.000 0.00 0.00 0.00 1.89
3640 4183 7.493367 AGTGCTCTCTTATCGCTTTAATTACT 58.507 34.615 0.00 0.00 0.00 2.24
3641 4184 7.982354 AGTGCTCTCTTATCGCTTTAATTACTT 59.018 33.333 0.00 0.00 0.00 2.24
3642 4185 8.604890 GTGCTCTCTTATCGCTTTAATTACTTT 58.395 33.333 0.00 0.00 0.00 2.66
3643 4186 8.604035 TGCTCTCTTATCGCTTTAATTACTTTG 58.396 33.333 0.00 0.00 0.00 2.77
3644 4187 7.584485 GCTCTCTTATCGCTTTAATTACTTTGC 59.416 37.037 0.00 0.00 0.00 3.68
3645 4188 7.916552 TCTCTTATCGCTTTAATTACTTTGCC 58.083 34.615 0.00 0.00 0.00 4.52
3646 4189 7.551262 TCTCTTATCGCTTTAATTACTTTGCCA 59.449 33.333 0.00 0.00 0.00 4.92
3647 4190 7.469260 TCTTATCGCTTTAATTACTTTGCCAC 58.531 34.615 0.00 0.00 0.00 5.01
3648 4191 5.637006 ATCGCTTTAATTACTTTGCCACA 57.363 34.783 0.00 0.00 0.00 4.17
3649 4192 5.637006 TCGCTTTAATTACTTTGCCACAT 57.363 34.783 0.00 0.00 0.00 3.21
3650 4193 5.636837 TCGCTTTAATTACTTTGCCACATC 58.363 37.500 0.00 0.00 0.00 3.06
3651 4194 5.182190 TCGCTTTAATTACTTTGCCACATCA 59.818 36.000 0.00 0.00 0.00 3.07
3652 4195 5.861251 CGCTTTAATTACTTTGCCACATCAA 59.139 36.000 0.00 0.00 0.00 2.57
3653 4196 6.183359 CGCTTTAATTACTTTGCCACATCAAC 60.183 38.462 0.00 0.00 0.00 3.18
3654 4197 6.868339 GCTTTAATTACTTTGCCACATCAACT 59.132 34.615 0.00 0.00 0.00 3.16
3655 4198 7.384932 GCTTTAATTACTTTGCCACATCAACTT 59.615 33.333 0.00 0.00 0.00 2.66
3656 4199 9.260002 CTTTAATTACTTTGCCACATCAACTTT 57.740 29.630 0.00 0.00 0.00 2.66
3657 4200 9.606631 TTTAATTACTTTGCCACATCAACTTTT 57.393 25.926 0.00 0.00 0.00 2.27
3658 4201 9.606631 TTAATTACTTTGCCACATCAACTTTTT 57.393 25.926 0.00 0.00 0.00 1.94
3681 4224 5.039920 TGCCTATGTGACATTCTTAGCAT 57.960 39.130 2.29 0.00 0.00 3.79
3693 4236 9.088987 TGACATTCTTAGCATCTATACATGGTA 57.911 33.333 0.00 0.00 36.00 3.25
3745 4288 4.141065 ACCCCTATACAGGAGTACTACCAC 60.141 50.000 0.00 0.00 45.91 4.16
3748 4291 4.519730 CCTATACAGGAGTACTACCACTGC 59.480 50.000 0.00 0.00 45.91 4.40
3766 4309 4.096984 CACTGCTGTCCTTTTCTGTTTTCT 59.903 41.667 0.00 0.00 0.00 2.52
3783 4326 9.457436 TCTGTTTTCTATAAATAAAGGGGTGTC 57.543 33.333 0.00 0.00 0.00 3.67
3878 4422 6.414732 TGTTAGGAAATTGACTCCACCTATG 58.585 40.000 0.00 0.00 35.20 2.23
3887 4431 0.327576 CTCCACCTATGGGGGAGGTT 60.328 60.000 23.58 0.00 45.40 3.50
3902 4446 1.153549 GGTTCAGCCGGCTCTACAG 60.154 63.158 30.29 16.07 0.00 2.74
3904 4448 2.359169 TTCAGCCGGCTCTACAGGG 61.359 63.158 30.29 14.35 33.55 4.45
3911 4455 0.391263 CGGCTCTACAGGGTGTTTCC 60.391 60.000 0.00 0.00 0.00 3.13
3958 4502 9.257651 GTCTAATATAAGAAGGTACGCAATTGT 57.742 33.333 7.40 0.00 0.00 2.71
3966 4510 3.340928 AGGTACGCAATTGTCTTAACCC 58.659 45.455 7.40 0.00 0.00 4.11
3986 4530 9.847224 TTAACCCCAAGAAAATCATCTCTATAC 57.153 33.333 0.00 0.00 0.00 1.47
3999 4543 4.727235 TCTCTATACGCACATACACTCG 57.273 45.455 0.00 0.00 0.00 4.18
4003 4547 0.528924 TACGCACATACACTCGCCTT 59.471 50.000 0.00 0.00 0.00 4.35
4010 4554 4.273480 GCACATACACTCGCCTTTATGAAT 59.727 41.667 0.00 0.00 0.00 2.57
4011 4555 5.559035 GCACATACACTCGCCTTTATGAATC 60.559 44.000 0.00 0.00 0.00 2.52
4013 4557 3.247006 ACACTCGCCTTTATGAATCGT 57.753 42.857 0.00 0.00 0.00 3.73
4059 4605 6.621394 TCTATAAATAGAGCACCACCCTAGT 58.379 40.000 0.00 0.00 34.63 2.57
4063 4609 1.741770 GAGCACCACCCTAGTTGCG 60.742 63.158 0.00 0.00 0.00 4.85
4076 4622 5.093457 CCCTAGTTGCGTACGTATATCATG 58.907 45.833 17.90 0.17 0.00 3.07
4086 4632 8.340443 TGCGTACGTATATCATGTATCTTATCC 58.660 37.037 17.90 0.00 31.32 2.59
4107 4653 5.363939 TCCCCTTTACTTTTGTGCATTTTG 58.636 37.500 0.00 0.00 0.00 2.44
4108 4654 5.104735 TCCCCTTTACTTTTGTGCATTTTGT 60.105 36.000 0.00 0.00 0.00 2.83
4109 4655 5.007528 CCCCTTTACTTTTGTGCATTTTGTG 59.992 40.000 0.00 0.00 0.00 3.33
4110 4656 5.584251 CCCTTTACTTTTGTGCATTTTGTGT 59.416 36.000 0.00 0.00 0.00 3.72
4111 4657 6.456718 CCCTTTACTTTTGTGCATTTTGTGTG 60.457 38.462 0.00 0.00 0.00 3.82
4112 4658 6.091986 CCTTTACTTTTGTGCATTTTGTGTGT 59.908 34.615 0.00 0.00 0.00 3.72
4113 4659 7.360776 CCTTTACTTTTGTGCATTTTGTGTGTT 60.361 33.333 0.00 0.00 0.00 3.32
4114 4660 5.280328 ACTTTTGTGCATTTTGTGTGTTG 57.720 34.783 0.00 0.00 0.00 3.33
4115 4661 4.993584 ACTTTTGTGCATTTTGTGTGTTGA 59.006 33.333 0.00 0.00 0.00 3.18
4116 4662 5.642919 ACTTTTGTGCATTTTGTGTGTTGAT 59.357 32.000 0.00 0.00 0.00 2.57
4117 4663 5.715429 TTTGTGCATTTTGTGTGTTGATC 57.285 34.783 0.00 0.00 0.00 2.92
4118 4664 4.382345 TGTGCATTTTGTGTGTTGATCA 57.618 36.364 0.00 0.00 0.00 2.92
4119 4665 4.946445 TGTGCATTTTGTGTGTTGATCAT 58.054 34.783 0.00 0.00 0.00 2.45
4120 4666 4.983538 TGTGCATTTTGTGTGTTGATCATC 59.016 37.500 0.00 0.00 0.00 2.92
4121 4667 5.221283 TGTGCATTTTGTGTGTTGATCATCT 60.221 36.000 0.00 0.00 0.00 2.90
4122 4668 5.693104 GTGCATTTTGTGTGTTGATCATCTT 59.307 36.000 0.00 0.00 0.00 2.40
4135 4681 1.133253 CATCTTTGGCAGCACGACG 59.867 57.895 0.00 0.00 0.00 5.12
4139 4685 3.741830 TTTGGCAGCACGACGTCCA 62.742 57.895 10.58 0.00 0.00 4.02
4140 4686 3.741830 TTGGCAGCACGACGTCCAA 62.742 57.895 10.58 13.21 33.86 3.53
4150 4696 0.730494 CGACGTCCAACCGGTTACTC 60.730 60.000 21.79 13.08 0.00 2.59
4158 4704 4.939439 GTCCAACCGGTTACTCAACAATAT 59.061 41.667 21.79 0.00 36.29 1.28
4159 4705 4.938832 TCCAACCGGTTACTCAACAATATG 59.061 41.667 21.79 3.00 36.29 1.78
4168 4714 9.577110 CGGTTACTCAACAATATGAAACTAGTA 57.423 33.333 0.00 0.00 36.29 1.82
4242 4788 1.066716 TGTCCTACACCAACGCATACC 60.067 52.381 0.00 0.00 0.00 2.73
4246 4792 0.036199 TACACCAACGCATACCCCAC 60.036 55.000 0.00 0.00 0.00 4.61
4250 4796 0.814010 CCAACGCATACCCCACTAGC 60.814 60.000 0.00 0.00 0.00 3.42
4303 4849 0.250510 GTATAGCAGGCTCCCCTTGC 60.251 60.000 0.00 0.00 40.33 4.01
4315 4861 2.437897 CCTTGCCTGCCCTCACTT 59.562 61.111 0.00 0.00 0.00 3.16
4319 4865 2.032681 GCCTGCCCTCACTTCGTT 59.967 61.111 0.00 0.00 0.00 3.85
4320 4866 2.035442 GCCTGCCCTCACTTCGTTC 61.035 63.158 0.00 0.00 0.00 3.95
4335 4881 3.327404 TTCCCAAGGGGCGACTCC 61.327 66.667 5.08 0.00 43.94 3.85
4357 4903 0.322456 CGGATCCCAGTCTTGCCAAA 60.322 55.000 6.06 0.00 0.00 3.28
4358 4904 1.886222 CGGATCCCAGTCTTGCCAAAA 60.886 52.381 6.06 0.00 0.00 2.44
4359 4905 2.460669 GGATCCCAGTCTTGCCAAAAT 58.539 47.619 0.00 0.00 0.00 1.82
4360 4906 2.167075 GGATCCCAGTCTTGCCAAAATG 59.833 50.000 0.00 0.00 0.00 2.32
4361 4907 2.380064 TCCCAGTCTTGCCAAAATGT 57.620 45.000 0.00 0.00 0.00 2.71
4362 4908 2.676748 TCCCAGTCTTGCCAAAATGTT 58.323 42.857 0.00 0.00 0.00 2.71
4363 4909 2.627699 TCCCAGTCTTGCCAAAATGTTC 59.372 45.455 0.00 0.00 0.00 3.18
4364 4910 2.607771 CCCAGTCTTGCCAAAATGTTCG 60.608 50.000 0.00 0.00 0.00 3.95
4365 4911 2.053627 CAGTCTTGCCAAAATGTTCGC 58.946 47.619 0.00 0.00 0.00 4.70
4366 4912 1.000274 AGTCTTGCCAAAATGTTCGCC 60.000 47.619 0.00 0.00 0.00 5.54
4367 4913 1.035923 TCTTGCCAAAATGTTCGCCA 58.964 45.000 0.00 0.00 0.00 5.69
4368 4914 1.617850 TCTTGCCAAAATGTTCGCCAT 59.382 42.857 0.00 0.00 34.36 4.40
4369 4915 2.822561 TCTTGCCAAAATGTTCGCCATA 59.177 40.909 0.00 0.00 31.97 2.74
4370 4916 3.446873 TCTTGCCAAAATGTTCGCCATAT 59.553 39.130 0.00 0.00 31.97 1.78
4371 4917 4.642437 TCTTGCCAAAATGTTCGCCATATA 59.358 37.500 0.00 0.00 31.97 0.86
4372 4918 5.301551 TCTTGCCAAAATGTTCGCCATATAT 59.698 36.000 0.00 0.00 31.97 0.86
4373 4919 5.528043 TGCCAAAATGTTCGCCATATATT 57.472 34.783 0.00 0.00 31.97 1.28
4374 4920 6.641169 TGCCAAAATGTTCGCCATATATTA 57.359 33.333 0.00 0.00 31.97 0.98
4375 4921 7.043961 TGCCAAAATGTTCGCCATATATTAA 57.956 32.000 0.00 0.00 31.97 1.40
4376 4922 7.492524 TGCCAAAATGTTCGCCATATATTAAA 58.507 30.769 0.00 0.00 31.97 1.52
4377 4923 7.981789 TGCCAAAATGTTCGCCATATATTAAAA 59.018 29.630 0.00 0.00 31.97 1.52
4378 4924 8.821894 GCCAAAATGTTCGCCATATATTAAAAA 58.178 29.630 0.00 0.00 31.97 1.94
4403 4949 9.887406 AAAAGTTCATCATGCATTGAAAATTTC 57.113 25.926 13.97 0.00 38.03 2.17
4404 4950 8.610248 AAGTTCATCATGCATTGAAAATTTCA 57.390 26.923 13.97 4.03 38.03 2.69
4405 4951 8.025243 AGTTCATCATGCATTGAAAATTTCAC 57.975 30.769 13.97 3.05 39.87 3.18
4406 4952 7.876068 AGTTCATCATGCATTGAAAATTTCACT 59.124 29.630 13.97 0.00 39.87 3.41
4407 4953 7.589574 TCATCATGCATTGAAAATTTCACTG 57.410 32.000 18.06 18.06 41.61 3.66
4408 4954 7.156000 TCATCATGCATTGAAAATTTCACTGT 58.844 30.769 21.53 5.87 41.01 3.55
4409 4955 8.305317 TCATCATGCATTGAAAATTTCACTGTA 58.695 29.630 21.53 18.94 41.01 2.74
4410 4956 9.093970 CATCATGCATTGAAAATTTCACTGTAT 57.906 29.630 21.53 20.02 42.97 2.29
4412 4958 9.571810 TCATGCATTGAAAATTTCACTGTATAC 57.428 29.630 21.82 10.25 41.30 1.47
4413 4959 9.356433 CATGCATTGAAAATTTCACTGTATACA 57.644 29.630 21.82 14.19 41.30 2.29
4414 4960 9.926158 ATGCATTGAAAATTTCACTGTATACAA 57.074 25.926 21.26 1.64 41.38 2.41
4415 4961 9.755804 TGCATTGAAAATTTCACTGTATACAAA 57.244 25.926 21.53 0.00 41.01 2.83
4466 5012 8.458573 TGTGTAGTGAGTATTTGGAAAAATGT 57.541 30.769 0.00 0.00 0.00 2.71
4467 5013 8.908903 TGTGTAGTGAGTATTTGGAAAAATGTT 58.091 29.630 0.00 0.00 0.00 2.71
4468 5014 9.394477 GTGTAGTGAGTATTTGGAAAAATGTTC 57.606 33.333 0.00 0.00 0.00 3.18
4469 5015 9.126151 TGTAGTGAGTATTTGGAAAAATGTTCA 57.874 29.630 0.00 0.00 0.00 3.18
4472 5018 8.859090 AGTGAGTATTTGGAAAAATGTTCATCA 58.141 29.630 0.00 0.00 0.00 3.07
4473 5019 9.643693 GTGAGTATTTGGAAAAATGTTCATCAT 57.356 29.630 0.00 0.00 38.57 2.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.288366 TGATGTGGTACCTTCAAGATCCAA 59.712 41.667 14.36 0.00 0.00 3.53
1 2 3.843619 TGATGTGGTACCTTCAAGATCCA 59.156 43.478 14.36 5.17 0.00 3.41
2 3 4.192317 GTGATGTGGTACCTTCAAGATCC 58.808 47.826 14.36 0.00 0.00 3.36
3 4 4.832248 TGTGATGTGGTACCTTCAAGATC 58.168 43.478 14.36 6.79 0.00 2.75
4 5 4.908601 TGTGATGTGGTACCTTCAAGAT 57.091 40.909 14.36 0.00 0.00 2.40
5 6 4.578871 CATGTGATGTGGTACCTTCAAGA 58.421 43.478 14.36 4.84 0.00 3.02
16 17 6.971527 AAATTTGTATTGCATGTGATGTGG 57.028 33.333 0.00 0.00 0.00 4.17
22 23 9.624697 ACAAGTAGTAAATTTGTATTGCATGTG 57.375 29.630 0.00 0.00 33.57 3.21
35 36 9.515226 TTCATGCTCCTAAACAAGTAGTAAATT 57.485 29.630 0.00 0.00 0.00 1.82
38 39 7.903145 TCTTCATGCTCCTAAACAAGTAGTAA 58.097 34.615 0.00 0.00 0.00 2.24
39 40 7.476540 TCTTCATGCTCCTAAACAAGTAGTA 57.523 36.000 0.00 0.00 0.00 1.82
44 45 5.397326 GCTTTCTTCATGCTCCTAAACAAG 58.603 41.667 0.00 0.00 0.00 3.16
87 88 1.363744 ACTTCTTAGCAGCGCATCAC 58.636 50.000 11.47 0.00 0.00 3.06
100 101 2.117051 GGGACGGAGGGAATACTTCTT 58.883 52.381 0.00 0.00 0.00 2.52
105 106 2.793288 TTTTGGGACGGAGGGAATAC 57.207 50.000 0.00 0.00 0.00 1.89
106 107 3.526019 AGAATTTTGGGACGGAGGGAATA 59.474 43.478 0.00 0.00 0.00 1.75
107 108 2.311841 AGAATTTTGGGACGGAGGGAAT 59.688 45.455 0.00 0.00 0.00 3.01
108 109 1.708551 AGAATTTTGGGACGGAGGGAA 59.291 47.619 0.00 0.00 0.00 3.97
109 110 1.368374 AGAATTTTGGGACGGAGGGA 58.632 50.000 0.00 0.00 0.00 4.20
110 111 1.818674 CAAGAATTTTGGGACGGAGGG 59.181 52.381 0.00 0.00 0.00 4.30
111 112 2.488153 GACAAGAATTTTGGGACGGAGG 59.512 50.000 0.00 0.00 0.00 4.30
112 113 3.412386 AGACAAGAATTTTGGGACGGAG 58.588 45.455 0.00 0.00 0.00 4.63
113 114 3.502123 AGACAAGAATTTTGGGACGGA 57.498 42.857 0.00 0.00 0.00 4.69
114 115 5.001232 TCTAAGACAAGAATTTTGGGACGG 58.999 41.667 0.00 0.00 0.00 4.79
115 116 6.743575 ATCTAAGACAAGAATTTTGGGACG 57.256 37.500 5.68 0.00 0.00 4.79
116 117 8.360390 ACAAATCTAAGACAAGAATTTTGGGAC 58.640 33.333 0.00 0.00 33.04 4.46
117 118 8.477419 ACAAATCTAAGACAAGAATTTTGGGA 57.523 30.769 0.00 0.00 33.04 4.37
118 119 8.579863 AGACAAATCTAAGACAAGAATTTTGGG 58.420 33.333 0.00 0.00 33.04 4.12
126 127 9.582431 CCGTATTTAGACAAATCTAAGACAAGA 57.418 33.333 9.81 0.00 45.93 3.02
127 128 9.582431 TCCGTATTTAGACAAATCTAAGACAAG 57.418 33.333 9.81 3.88 45.93 3.16
129 130 9.529325 CATCCGTATTTAGACAAATCTAAGACA 57.471 33.333 9.81 0.00 45.93 3.41
130 131 9.530633 ACATCCGTATTTAGACAAATCTAAGAC 57.469 33.333 0.00 0.83 45.93 3.01
137 138 9.832445 ACTTGATACATCCGTATTTAGACAAAT 57.168 29.630 0.00 0.00 38.48 2.32
138 139 9.309516 GACTTGATACATCCGTATTTAGACAAA 57.690 33.333 0.00 0.00 38.48 2.83
139 140 8.471609 TGACTTGATACATCCGTATTTAGACAA 58.528 33.333 0.00 0.00 38.48 3.18
140 141 7.919091 GTGACTTGATACATCCGTATTTAGACA 59.081 37.037 0.00 0.00 38.48 3.41
141 142 7.113124 CGTGACTTGATACATCCGTATTTAGAC 59.887 40.741 0.00 0.00 38.48 2.59
142 143 7.136772 CGTGACTTGATACATCCGTATTTAGA 58.863 38.462 0.00 0.00 38.48 2.10
143 144 6.916387 ACGTGACTTGATACATCCGTATTTAG 59.084 38.462 0.00 0.00 38.48 1.85
144 145 6.798482 ACGTGACTTGATACATCCGTATTTA 58.202 36.000 0.00 0.00 38.48 1.40
145 146 5.657474 ACGTGACTTGATACATCCGTATTT 58.343 37.500 0.00 0.00 38.48 1.40
146 147 5.258456 ACGTGACTTGATACATCCGTATT 57.742 39.130 0.00 0.00 38.48 1.89
147 148 4.913335 ACGTGACTTGATACATCCGTAT 57.087 40.909 0.00 0.00 41.16 3.06
148 149 4.707030 AACGTGACTTGATACATCCGTA 57.293 40.909 0.00 0.00 0.00 4.02
149 150 3.587797 AACGTGACTTGATACATCCGT 57.412 42.857 0.00 0.00 0.00 4.69
150 151 4.921470 AAAACGTGACTTGATACATCCG 57.079 40.909 0.00 0.00 0.00 4.18
151 152 6.963049 ACTAAAACGTGACTTGATACATCC 57.037 37.500 0.00 0.00 0.00 3.51
154 155 9.577110 CCTAATACTAAAACGTGACTTGATACA 57.423 33.333 0.00 0.00 0.00 2.29
155 156 9.578439 ACCTAATACTAAAACGTGACTTGATAC 57.422 33.333 0.00 0.00 0.00 2.24
157 158 9.578439 GTACCTAATACTAAAACGTGACTTGAT 57.422 33.333 0.00 0.00 0.00 2.57
158 159 8.575589 TGTACCTAATACTAAAACGTGACTTGA 58.424 33.333 0.00 0.00 34.56 3.02
159 160 8.746922 TGTACCTAATACTAAAACGTGACTTG 57.253 34.615 0.00 0.00 34.56 3.16
160 161 9.578439 GATGTACCTAATACTAAAACGTGACTT 57.422 33.333 0.00 0.00 34.56 3.01
161 162 8.193438 GGATGTACCTAATACTAAAACGTGACT 58.807 37.037 0.00 0.00 34.56 3.41
162 163 7.166473 CGGATGTACCTAATACTAAAACGTGAC 59.834 40.741 0.00 0.00 34.56 3.67
163 164 7.148086 ACGGATGTACCTAATACTAAAACGTGA 60.148 37.037 0.00 0.00 34.56 4.35
164 165 6.974622 ACGGATGTACCTAATACTAAAACGTG 59.025 38.462 0.00 0.00 34.56 4.49
165 166 7.100458 ACGGATGTACCTAATACTAAAACGT 57.900 36.000 0.00 0.00 34.56 3.99
166 167 9.334693 GATACGGATGTACCTAATACTAAAACG 57.665 37.037 0.00 0.00 34.56 3.60
200 201 9.463443 CGTCCAAAAATTCTTGTCTTAGATTTT 57.537 29.630 0.00 0.00 32.19 1.82
201 202 8.082242 CCGTCCAAAAATTCTTGTCTTAGATTT 58.918 33.333 0.00 0.00 0.00 2.17
202 203 7.447238 TCCGTCCAAAAATTCTTGTCTTAGATT 59.553 33.333 0.00 0.00 0.00 2.40
203 204 6.940298 TCCGTCCAAAAATTCTTGTCTTAGAT 59.060 34.615 0.00 0.00 0.00 1.98
204 205 6.292923 TCCGTCCAAAAATTCTTGTCTTAGA 58.707 36.000 0.00 0.00 0.00 2.10
205 206 6.348540 CCTCCGTCCAAAAATTCTTGTCTTAG 60.349 42.308 0.00 0.00 0.00 2.18
206 207 5.472137 CCTCCGTCCAAAAATTCTTGTCTTA 59.528 40.000 0.00 0.00 0.00 2.10
207 208 4.278419 CCTCCGTCCAAAAATTCTTGTCTT 59.722 41.667 0.00 0.00 0.00 3.01
208 209 3.821033 CCTCCGTCCAAAAATTCTTGTCT 59.179 43.478 0.00 0.00 0.00 3.41
209 210 3.057526 CCCTCCGTCCAAAAATTCTTGTC 60.058 47.826 0.00 0.00 0.00 3.18
210 211 2.890945 CCCTCCGTCCAAAAATTCTTGT 59.109 45.455 0.00 0.00 0.00 3.16
211 212 3.153919 TCCCTCCGTCCAAAAATTCTTG 58.846 45.455 0.00 0.00 0.00 3.02
212 213 3.181433 ACTCCCTCCGTCCAAAAATTCTT 60.181 43.478 0.00 0.00 0.00 2.52
213 214 2.375509 ACTCCCTCCGTCCAAAAATTCT 59.624 45.455 0.00 0.00 0.00 2.40
214 215 2.791655 ACTCCCTCCGTCCAAAAATTC 58.208 47.619 0.00 0.00 0.00 2.17
215 216 2.971901 ACTCCCTCCGTCCAAAAATT 57.028 45.000 0.00 0.00 0.00 1.82
216 217 3.178865 TCTACTCCCTCCGTCCAAAAAT 58.821 45.455 0.00 0.00 0.00 1.82
217 218 2.612000 TCTACTCCCTCCGTCCAAAAA 58.388 47.619 0.00 0.00 0.00 1.94
218 219 2.314071 TCTACTCCCTCCGTCCAAAA 57.686 50.000 0.00 0.00 0.00 2.44
219 220 2.108168 CATCTACTCCCTCCGTCCAAA 58.892 52.381 0.00 0.00 0.00 3.28
220 221 1.286849 TCATCTACTCCCTCCGTCCAA 59.713 52.381 0.00 0.00 0.00 3.53
221 222 0.924090 TCATCTACTCCCTCCGTCCA 59.076 55.000 0.00 0.00 0.00 4.02
222 223 1.320507 GTCATCTACTCCCTCCGTCC 58.679 60.000 0.00 0.00 0.00 4.79
223 224 0.945813 CGTCATCTACTCCCTCCGTC 59.054 60.000 0.00 0.00 0.00 4.79
224 225 0.255318 ACGTCATCTACTCCCTCCGT 59.745 55.000 0.00 0.00 0.00 4.69
225 226 2.251409 TACGTCATCTACTCCCTCCG 57.749 55.000 0.00 0.00 0.00 4.63
226 227 5.532664 AATTTACGTCATCTACTCCCTCC 57.467 43.478 0.00 0.00 0.00 4.30
227 228 7.648510 CACTTAATTTACGTCATCTACTCCCTC 59.351 40.741 0.00 0.00 0.00 4.30
228 229 7.490000 CACTTAATTTACGTCATCTACTCCCT 58.510 38.462 0.00 0.00 0.00 4.20
229 230 6.200475 GCACTTAATTTACGTCATCTACTCCC 59.800 42.308 0.00 0.00 0.00 4.30
230 231 6.979238 AGCACTTAATTTACGTCATCTACTCC 59.021 38.462 0.00 0.00 0.00 3.85
231 232 7.988904 AGCACTTAATTTACGTCATCTACTC 57.011 36.000 0.00 0.00 0.00 2.59
241 242 9.051027 CAGAACAATGTTAGCACTTAATTTACG 57.949 33.333 0.00 0.00 0.00 3.18
304 305 6.147985 CCTCTTCTTTCCTCTTCGTTTTTAGG 59.852 42.308 0.00 0.00 0.00 2.69
306 307 5.995897 CCCTCTTCTTTCCTCTTCGTTTTTA 59.004 40.000 0.00 0.00 0.00 1.52
332 334 4.682401 ACGCAAATTCGTTTCCAAATTACC 59.318 37.500 0.00 0.00 40.07 2.85
357 363 3.567164 GGATGTGATCAAATGGAGCGAAT 59.433 43.478 2.15 0.00 33.60 3.34
439 484 5.874810 CCTCCGTCTCAAAATAAGTGATTCA 59.125 40.000 0.00 0.00 0.00 2.57
440 485 5.294552 CCCTCCGTCTCAAAATAAGTGATTC 59.705 44.000 0.00 0.00 0.00 2.52
441 486 5.045869 TCCCTCCGTCTCAAAATAAGTGATT 60.046 40.000 0.00 0.00 0.00 2.57
443 488 3.835978 TCCCTCCGTCTCAAAATAAGTGA 59.164 43.478 0.00 0.00 0.00 3.41
446 491 4.473477 ACTCCCTCCGTCTCAAAATAAG 57.527 45.455 0.00 0.00 0.00 1.73
447 492 5.021458 ACTACTCCCTCCGTCTCAAAATAA 58.979 41.667 0.00 0.00 0.00 1.40
448 493 4.607239 ACTACTCCCTCCGTCTCAAAATA 58.393 43.478 0.00 0.00 0.00 1.40
449 494 3.442076 ACTACTCCCTCCGTCTCAAAAT 58.558 45.455 0.00 0.00 0.00 1.82
450 495 2.885616 ACTACTCCCTCCGTCTCAAAA 58.114 47.619 0.00 0.00 0.00 2.44
451 496 2.599408 ACTACTCCCTCCGTCTCAAA 57.401 50.000 0.00 0.00 0.00 2.69
452 497 2.599408 AACTACTCCCTCCGTCTCAA 57.401 50.000 0.00 0.00 0.00 3.02
454 499 4.643784 TGAATTAACTACTCCCTCCGTCTC 59.356 45.833 0.00 0.00 0.00 3.36
456 501 4.996788 TGAATTAACTACTCCCTCCGTC 57.003 45.455 0.00 0.00 0.00 4.79
458 503 7.760340 GCTATTATGAATTAACTACTCCCTCCG 59.240 40.741 0.00 0.00 0.00 4.63
486 534 5.337788 TGAACCAAATAGGGCCTAACATTT 58.662 37.500 18.91 12.08 43.89 2.32
491 539 6.159751 AGACTTATGAACCAAATAGGGCCTAA 59.840 38.462 18.91 0.81 43.89 2.69
492 540 5.670361 AGACTTATGAACCAAATAGGGCCTA 59.330 40.000 17.16 17.16 43.89 3.93
495 543 6.018180 CGTAAGACTTATGAACCAAATAGGGC 60.018 42.308 8.53 0.00 41.08 5.19
527 575 9.330220 ACTTAGGACTTATAAGTTGGGACTAAA 57.670 33.333 18.96 5.57 39.82 1.85
528 576 8.906238 ACTTAGGACTTATAAGTTGGGACTAA 57.094 34.615 18.96 17.79 39.82 2.24
529 577 7.562821 GGACTTAGGACTTATAAGTTGGGACTA 59.437 40.741 18.96 12.92 42.17 2.59
530 578 6.383436 GGACTTAGGACTTATAAGTTGGGACT 59.617 42.308 18.96 13.74 42.17 3.85
531 579 6.407865 GGGACTTAGGACTTATAAGTTGGGAC 60.408 46.154 18.96 6.19 42.17 4.46
532 580 5.664457 GGGACTTAGGACTTATAAGTTGGGA 59.336 44.000 18.96 6.15 42.17 4.37
533 581 5.666265 AGGGACTTAGGACTTATAAGTTGGG 59.334 44.000 18.96 10.37 42.17 4.12
534 582 6.809976 AGGGACTTAGGACTTATAAGTTGG 57.190 41.667 18.96 10.07 42.17 3.77
540 588 9.779951 AGACTTTTTAGGGACTTAGGACTTATA 57.220 33.333 0.00 0.00 41.75 0.98
541 589 8.682297 AGACTTTTTAGGGACTTAGGACTTAT 57.318 34.615 0.00 0.00 41.75 1.73
542 590 7.954620 AGAGACTTTTTAGGGACTTAGGACTTA 59.045 37.037 0.00 0.00 41.75 2.24
543 591 6.788456 AGAGACTTTTTAGGGACTTAGGACTT 59.212 38.462 0.00 0.00 41.75 3.01
544 592 6.324544 AGAGACTTTTTAGGGACTTAGGACT 58.675 40.000 0.00 0.00 41.75 3.85
545 593 6.608539 AGAGACTTTTTAGGGACTTAGGAC 57.391 41.667 0.00 0.00 41.75 3.85
546 594 6.666980 GGTAGAGACTTTTTAGGGACTTAGGA 59.333 42.308 0.00 0.00 41.75 2.94
547 595 6.668718 AGGTAGAGACTTTTTAGGGACTTAGG 59.331 42.308 0.00 0.00 41.75 2.69
548 596 7.178805 ACAGGTAGAGACTTTTTAGGGACTTAG 59.821 40.741 0.00 0.00 41.75 2.18
549 597 7.015064 ACAGGTAGAGACTTTTTAGGGACTTA 58.985 38.462 0.00 0.00 41.75 2.24
550 598 5.845065 ACAGGTAGAGACTTTTTAGGGACTT 59.155 40.000 0.00 0.00 41.75 3.01
551 599 5.404395 ACAGGTAGAGACTTTTTAGGGACT 58.596 41.667 0.00 0.00 46.37 3.85
552 600 5.741962 ACAGGTAGAGACTTTTTAGGGAC 57.258 43.478 0.00 0.00 0.00 4.46
553 601 6.465321 CCAAACAGGTAGAGACTTTTTAGGGA 60.465 42.308 0.00 0.00 0.00 4.20
554 602 5.705905 CCAAACAGGTAGAGACTTTTTAGGG 59.294 44.000 0.00 0.00 0.00 3.53
555 603 6.803154 CCAAACAGGTAGAGACTTTTTAGG 57.197 41.667 0.00 0.00 0.00 2.69
570 618 0.535102 AGTCGCAGGAACCAAACAGG 60.535 55.000 0.00 0.00 45.67 4.00
571 619 1.308998 AAGTCGCAGGAACCAAACAG 58.691 50.000 0.00 0.00 0.00 3.16
572 620 2.614983 GTTAAGTCGCAGGAACCAAACA 59.385 45.455 0.00 0.00 0.00 2.83
573 621 2.614983 TGTTAAGTCGCAGGAACCAAAC 59.385 45.455 0.00 0.00 0.00 2.93
574 622 2.920524 TGTTAAGTCGCAGGAACCAAA 58.079 42.857 0.00 0.00 0.00 3.28
575 623 2.623878 TGTTAAGTCGCAGGAACCAA 57.376 45.000 0.00 0.00 0.00 3.67
576 624 2.422597 CATGTTAAGTCGCAGGAACCA 58.577 47.619 0.00 0.00 0.00 3.67
577 625 1.737793 CCATGTTAAGTCGCAGGAACC 59.262 52.381 0.00 0.00 0.00 3.62
578 626 2.415512 GTCCATGTTAAGTCGCAGGAAC 59.584 50.000 0.00 0.00 0.00 3.62
579 627 2.301870 AGTCCATGTTAAGTCGCAGGAA 59.698 45.455 0.00 0.00 0.00 3.36
580 628 1.899814 AGTCCATGTTAAGTCGCAGGA 59.100 47.619 0.00 0.00 0.00 3.86
581 629 2.386661 AGTCCATGTTAAGTCGCAGG 57.613 50.000 0.00 0.00 0.00 4.85
582 630 5.637810 TCTTTTAGTCCATGTTAAGTCGCAG 59.362 40.000 0.00 0.00 0.00 5.18
583 631 5.407387 GTCTTTTAGTCCATGTTAAGTCGCA 59.593 40.000 0.00 0.00 0.00 5.10
584 632 5.163884 GGTCTTTTAGTCCATGTTAAGTCGC 60.164 44.000 0.00 0.00 0.00 5.19
585 633 5.929992 TGGTCTTTTAGTCCATGTTAAGTCG 59.070 40.000 0.00 0.00 28.55 4.18
586 634 7.923414 ATGGTCTTTTAGTCCATGTTAAGTC 57.077 36.000 4.95 0.00 41.46 3.01
587 635 9.975218 AATATGGTCTTTTAGTCCATGTTAAGT 57.025 29.630 13.41 0.00 42.62 2.24
591 639 9.747898 TTGTAATATGGTCTTTTAGTCCATGTT 57.252 29.630 15.13 15.13 42.62 2.71
592 640 9.174166 GTTGTAATATGGTCTTTTAGTCCATGT 57.826 33.333 13.41 6.18 42.62 3.21
593 641 9.396022 AGTTGTAATATGGTCTTTTAGTCCATG 57.604 33.333 13.41 0.00 42.62 3.66
603 651 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
614 662 9.577222 GAGAGTCTTATAGGGACTTATAGTTGT 57.423 37.037 10.43 0.00 43.13 3.32
615 663 9.016438 GGAGAGTCTTATAGGGACTTATAGTTG 57.984 40.741 10.43 0.00 43.13 3.16
616 664 8.962205 AGGAGAGTCTTATAGGGACTTATAGTT 58.038 37.037 10.43 0.00 43.13 2.24
617 665 8.528543 AGGAGAGTCTTATAGGGACTTATAGT 57.471 38.462 10.43 0.00 43.13 2.12
618 666 9.238368 CAAGGAGAGTCTTATAGGGACTTATAG 57.762 40.741 10.43 0.00 43.13 1.31
619 667 8.956860 TCAAGGAGAGTCTTATAGGGACTTATA 58.043 37.037 10.43 0.00 43.13 0.98
620 668 7.827787 TCAAGGAGAGTCTTATAGGGACTTAT 58.172 38.462 10.43 4.90 43.13 1.73
621 669 7.222180 TCAAGGAGAGTCTTATAGGGACTTA 57.778 40.000 10.43 0.00 43.13 2.24
622 670 6.093617 TCAAGGAGAGTCTTATAGGGACTT 57.906 41.667 10.43 3.61 43.13 3.01
623 671 5.735733 TCAAGGAGAGTCTTATAGGGACT 57.264 43.478 9.30 9.30 45.37 3.85
624 672 6.381707 ACTTTCAAGGAGAGTCTTATAGGGAC 59.618 42.308 0.00 0.00 0.00 4.46
625 673 6.503944 ACTTTCAAGGAGAGTCTTATAGGGA 58.496 40.000 0.00 0.00 0.00 4.20
626 674 6.800072 ACTTTCAAGGAGAGTCTTATAGGG 57.200 41.667 0.00 0.00 0.00 3.53
649 697 9.983024 TGGACATTTGGGACTTATAAAATAAGA 57.017 29.630 12.43 0.00 0.00 2.10
651 699 9.762381 AGTGGACATTTGGGACTTATAAAATAA 57.238 29.630 0.00 0.00 0.00 1.40
652 700 9.762381 AAGTGGACATTTGGGACTTATAAAATA 57.238 29.630 0.00 0.00 0.00 1.40
653 701 8.664669 AAGTGGACATTTGGGACTTATAAAAT 57.335 30.769 0.00 0.00 0.00 1.82
654 702 8.485578 AAAGTGGACATTTGGGACTTATAAAA 57.514 30.769 0.00 0.00 0.00 1.52
655 703 9.589461 TTAAAGTGGACATTTGGGACTTATAAA 57.411 29.630 0.00 0.00 0.00 1.40
656 704 9.238368 CTTAAAGTGGACATTTGGGACTTATAA 57.762 33.333 0.00 0.00 0.00 0.98
657 705 8.387813 ACTTAAAGTGGACATTTGGGACTTATA 58.612 33.333 0.00 0.00 0.00 0.98
658 706 7.238710 ACTTAAAGTGGACATTTGGGACTTAT 58.761 34.615 0.00 0.00 0.00 1.73
659 707 6.607019 ACTTAAAGTGGACATTTGGGACTTA 58.393 36.000 0.00 0.00 0.00 2.24
660 708 5.454966 ACTTAAAGTGGACATTTGGGACTT 58.545 37.500 0.00 0.00 0.00 3.01
661 709 5.061721 ACTTAAAGTGGACATTTGGGACT 57.938 39.130 0.00 0.00 0.00 3.85
662 710 4.217767 GGACTTAAAGTGGACATTTGGGAC 59.782 45.833 0.00 0.00 0.00 4.46
663 711 4.403734 GGACTTAAAGTGGACATTTGGGA 58.596 43.478 0.00 0.00 0.00 4.37
664 712 3.509967 GGGACTTAAAGTGGACATTTGGG 59.490 47.826 0.00 0.00 0.00 4.12
665 713 4.407365 AGGGACTTAAAGTGGACATTTGG 58.593 43.478 0.00 0.00 27.25 3.28
666 714 8.801882 TTATAGGGACTTAAAGTGGACATTTG 57.198 34.615 0.00 0.00 41.75 2.32
667 715 7.556635 GCTTATAGGGACTTAAAGTGGACATTT 59.443 37.037 0.00 0.00 41.75 2.32
668 716 7.054751 GCTTATAGGGACTTAAAGTGGACATT 58.945 38.462 0.00 0.00 41.75 2.71
669 717 6.409349 GGCTTATAGGGACTTAAAGTGGACAT 60.409 42.308 0.00 0.00 41.75 3.06
670 718 5.104652 GGCTTATAGGGACTTAAAGTGGACA 60.105 44.000 0.00 0.00 41.75 4.02
671 719 5.366460 GGCTTATAGGGACTTAAAGTGGAC 58.634 45.833 0.00 0.00 41.75 4.02
672 720 4.411212 GGGCTTATAGGGACTTAAAGTGGA 59.589 45.833 0.00 0.00 41.75 4.02
673 721 4.445879 GGGGCTTATAGGGACTTAAAGTGG 60.446 50.000 0.00 0.00 41.75 4.00
674 722 4.412528 AGGGGCTTATAGGGACTTAAAGTG 59.587 45.833 0.00 0.00 41.75 3.16
675 723 4.642938 AGGGGCTTATAGGGACTTAAAGT 58.357 43.478 0.00 0.00 41.75 2.66
676 724 4.658901 TGAGGGGCTTATAGGGACTTAAAG 59.341 45.833 0.00 0.00 41.75 1.85
677 725 4.637600 TGAGGGGCTTATAGGGACTTAAA 58.362 43.478 0.00 0.00 41.75 1.52
678 726 4.289837 TGAGGGGCTTATAGGGACTTAA 57.710 45.455 0.00 0.00 41.75 1.85
679 727 4.168101 CATGAGGGGCTTATAGGGACTTA 58.832 47.826 0.00 0.00 41.75 2.24
680 728 2.889522 TGAGGGGCTTATAGGGACTT 57.110 50.000 0.00 0.00 41.75 3.01
681 729 2.089925 ACATGAGGGGCTTATAGGGACT 60.090 50.000 0.00 0.00 46.37 3.85
682 730 2.339769 ACATGAGGGGCTTATAGGGAC 58.660 52.381 0.00 0.00 0.00 4.46
683 731 2.815357 ACATGAGGGGCTTATAGGGA 57.185 50.000 0.00 0.00 0.00 4.20
684 732 3.490348 CAAACATGAGGGGCTTATAGGG 58.510 50.000 0.00 0.00 0.00 3.53
685 733 3.117512 ACCAAACATGAGGGGCTTATAGG 60.118 47.826 0.00 0.00 0.00 2.57
686 734 4.170468 ACCAAACATGAGGGGCTTATAG 57.830 45.455 0.00 0.00 0.00 1.31
687 735 4.601406 AACCAAACATGAGGGGCTTATA 57.399 40.909 0.00 0.00 0.00 0.98
688 736 3.473113 AACCAAACATGAGGGGCTTAT 57.527 42.857 0.00 0.00 0.00 1.73
689 737 2.990740 AACCAAACATGAGGGGCTTA 57.009 45.000 0.00 0.00 0.00 3.09
690 738 2.101640 AAACCAAACATGAGGGGCTT 57.898 45.000 0.00 0.00 0.00 4.35
691 739 2.378547 TCTAAACCAAACATGAGGGGCT 59.621 45.455 0.00 0.00 0.00 5.19
692 740 2.802719 TCTAAACCAAACATGAGGGGC 58.197 47.619 0.00 0.00 0.00 5.80
693 741 3.701040 CCATCTAAACCAAACATGAGGGG 59.299 47.826 0.00 0.00 0.00 4.79
694 742 3.701040 CCCATCTAAACCAAACATGAGGG 59.299 47.826 0.00 0.00 0.00 4.30
695 743 4.399303 GTCCCATCTAAACCAAACATGAGG 59.601 45.833 0.00 0.35 0.00 3.86
696 744 5.256474 AGTCCCATCTAAACCAAACATGAG 58.744 41.667 0.00 0.00 0.00 2.90
697 745 5.255397 AGTCCCATCTAAACCAAACATGA 57.745 39.130 0.00 0.00 0.00 3.07
698 746 5.982890 AAGTCCCATCTAAACCAAACATG 57.017 39.130 0.00 0.00 0.00 3.21
699 747 7.308951 CGTTTAAGTCCCATCTAAACCAAACAT 60.309 37.037 0.00 0.00 0.00 2.71
700 748 6.016943 CGTTTAAGTCCCATCTAAACCAAACA 60.017 38.462 0.00 0.00 0.00 2.83
701 749 6.376177 CGTTTAAGTCCCATCTAAACCAAAC 58.624 40.000 0.00 0.00 0.00 2.93
702 750 5.474189 CCGTTTAAGTCCCATCTAAACCAAA 59.526 40.000 0.00 0.00 0.00 3.28
703 751 5.005094 CCGTTTAAGTCCCATCTAAACCAA 58.995 41.667 0.00 0.00 0.00 3.67
704 752 4.286549 TCCGTTTAAGTCCCATCTAAACCA 59.713 41.667 0.00 0.00 0.00 3.67
705 753 4.633126 GTCCGTTTAAGTCCCATCTAAACC 59.367 45.833 0.00 0.00 0.00 3.27
706 754 5.485620 AGTCCGTTTAAGTCCCATCTAAAC 58.514 41.667 0.00 0.00 0.00 2.01
707 755 5.750352 AGTCCGTTTAAGTCCCATCTAAA 57.250 39.130 0.00 0.00 0.00 1.85
708 756 5.750352 AAGTCCGTTTAAGTCCCATCTAA 57.250 39.130 0.00 0.00 0.00 2.10
709 757 5.750352 AAAGTCCGTTTAAGTCCCATCTA 57.250 39.130 0.00 0.00 0.00 1.98
710 758 4.635699 AAAGTCCGTTTAAGTCCCATCT 57.364 40.909 0.00 0.00 0.00 2.90
711 759 5.700722 AAAAAGTCCGTTTAAGTCCCATC 57.299 39.130 0.00 0.00 0.00 3.51
730 778 6.137559 ACTTATTGGTGTGGGGACTTAAAAA 58.862 36.000 0.00 0.00 0.00 1.94
731 779 5.707495 ACTTATTGGTGTGGGGACTTAAAA 58.293 37.500 0.00 0.00 0.00 1.52
732 780 5.318630 GACTTATTGGTGTGGGGACTTAAA 58.681 41.667 0.00 0.00 0.00 1.52
733 781 4.263594 GGACTTATTGGTGTGGGGACTTAA 60.264 45.833 0.00 0.00 0.00 1.85
734 782 3.264964 GGACTTATTGGTGTGGGGACTTA 59.735 47.826 0.00 0.00 0.00 2.24
735 783 2.041216 GGACTTATTGGTGTGGGGACTT 59.959 50.000 0.00 0.00 0.00 3.01
736 784 1.633945 GGACTTATTGGTGTGGGGACT 59.366 52.381 0.00 0.00 0.00 3.85
737 785 1.340697 GGGACTTATTGGTGTGGGGAC 60.341 57.143 0.00 0.00 0.00 4.46
738 786 0.996583 GGGACTTATTGGTGTGGGGA 59.003 55.000 0.00 0.00 0.00 4.81
739 787 0.999712 AGGGACTTATTGGTGTGGGG 59.000 55.000 0.00 0.00 27.25 4.96
740 788 1.354368 ACAGGGACTTATTGGTGTGGG 59.646 52.381 0.00 0.00 34.60 4.61
741 789 2.879103 ACAGGGACTTATTGGTGTGG 57.121 50.000 0.00 0.00 34.60 4.17
742 790 4.007659 GGTTACAGGGACTTATTGGTGTG 58.992 47.826 0.00 0.00 34.60 3.82
743 791 3.653836 TGGTTACAGGGACTTATTGGTGT 59.346 43.478 0.00 0.00 34.60 4.16
744 792 4.295141 TGGTTACAGGGACTTATTGGTG 57.705 45.455 0.00 0.00 34.60 4.17
745 793 5.074804 GTTTGGTTACAGGGACTTATTGGT 58.925 41.667 0.00 0.00 34.60 3.67
746 794 5.048294 GTGTTTGGTTACAGGGACTTATTGG 60.048 44.000 0.00 0.00 34.60 3.16
747 795 5.048294 GGTGTTTGGTTACAGGGACTTATTG 60.048 44.000 0.00 0.00 34.60 1.90
748 796 5.074804 GGTGTTTGGTTACAGGGACTTATT 58.925 41.667 0.00 0.00 34.60 1.40
749 797 4.507869 GGGTGTTTGGTTACAGGGACTTAT 60.508 45.833 0.00 0.00 34.60 1.73
750 798 3.181441 GGGTGTTTGGTTACAGGGACTTA 60.181 47.826 0.00 0.00 34.60 2.24
751 799 2.423803 GGGTGTTTGGTTACAGGGACTT 60.424 50.000 0.00 0.00 34.60 3.01
752 800 1.144298 GGGTGTTTGGTTACAGGGACT 59.856 52.381 0.00 0.00 43.88 3.85
753 801 1.144298 AGGGTGTTTGGTTACAGGGAC 59.856 52.381 0.00 0.00 0.00 4.46
754 802 1.422402 GAGGGTGTTTGGTTACAGGGA 59.578 52.381 0.00 0.00 0.00 4.20
755 803 1.423921 AGAGGGTGTTTGGTTACAGGG 59.576 52.381 0.00 0.00 0.00 4.45
756 804 2.951229 AGAGGGTGTTTGGTTACAGG 57.049 50.000 0.00 0.00 0.00 4.00
757 805 4.969484 ACTAAGAGGGTGTTTGGTTACAG 58.031 43.478 0.00 0.00 0.00 2.74
758 806 4.501915 CGACTAAGAGGGTGTTTGGTTACA 60.502 45.833 0.00 0.00 0.00 2.41
759 807 3.992427 CGACTAAGAGGGTGTTTGGTTAC 59.008 47.826 0.00 0.00 0.00 2.50
760 808 3.896888 TCGACTAAGAGGGTGTTTGGTTA 59.103 43.478 0.00 0.00 0.00 2.85
761 809 2.701951 TCGACTAAGAGGGTGTTTGGTT 59.298 45.455 0.00 0.00 0.00 3.67
762 810 2.036862 GTCGACTAAGAGGGTGTTTGGT 59.963 50.000 8.70 0.00 0.00 3.67
763 811 2.299297 AGTCGACTAAGAGGGTGTTTGG 59.701 50.000 18.46 0.00 0.00 3.28
764 812 3.005472 TCAGTCGACTAAGAGGGTGTTTG 59.995 47.826 19.57 1.78 0.00 2.93
765 813 3.005578 GTCAGTCGACTAAGAGGGTGTTT 59.994 47.826 19.57 0.00 39.22 2.83
766 814 2.557490 GTCAGTCGACTAAGAGGGTGTT 59.443 50.000 19.57 0.00 39.22 3.32
767 815 2.161030 GTCAGTCGACTAAGAGGGTGT 58.839 52.381 19.57 0.00 39.22 4.16
768 816 2.923605 GTCAGTCGACTAAGAGGGTG 57.076 55.000 19.57 4.16 39.22 4.61
778 826 4.563184 CCACAATAGCTAAAGTCAGTCGAC 59.437 45.833 7.70 7.70 42.95 4.20
779 827 4.219944 ACCACAATAGCTAAAGTCAGTCGA 59.780 41.667 0.00 0.00 0.00 4.20
780 828 4.327357 CACCACAATAGCTAAAGTCAGTCG 59.673 45.833 0.00 0.00 0.00 4.18
781 829 5.479306 TCACCACAATAGCTAAAGTCAGTC 58.521 41.667 0.00 0.00 0.00 3.51
782 830 5.012148 ACTCACCACAATAGCTAAAGTCAGT 59.988 40.000 0.00 0.00 0.00 3.41
783 831 5.482908 ACTCACCACAATAGCTAAAGTCAG 58.517 41.667 0.00 0.00 0.00 3.51
784 832 5.483685 ACTCACCACAATAGCTAAAGTCA 57.516 39.130 0.00 0.00 0.00 3.41
785 833 5.932303 TCAACTCACCACAATAGCTAAAGTC 59.068 40.000 0.00 0.00 0.00 3.01
786 834 5.865085 TCAACTCACCACAATAGCTAAAGT 58.135 37.500 0.00 0.00 0.00 2.66
787 835 6.992063 ATCAACTCACCACAATAGCTAAAG 57.008 37.500 0.00 0.00 0.00 1.85
788 836 7.759489 AAATCAACTCACCACAATAGCTAAA 57.241 32.000 0.00 0.00 0.00 1.85
789 837 7.446931 TCAAAATCAACTCACCACAATAGCTAA 59.553 33.333 0.00 0.00 0.00 3.09
790 838 6.939730 TCAAAATCAACTCACCACAATAGCTA 59.060 34.615 0.00 0.00 0.00 3.32
791 839 5.769662 TCAAAATCAACTCACCACAATAGCT 59.230 36.000 0.00 0.00 0.00 3.32
792 840 6.012658 TCAAAATCAACTCACCACAATAGC 57.987 37.500 0.00 0.00 0.00 2.97
793 841 7.086376 CCTTCAAAATCAACTCACCACAATAG 58.914 38.462 0.00 0.00 0.00 1.73
794 842 6.015519 CCCTTCAAAATCAACTCACCACAATA 60.016 38.462 0.00 0.00 0.00 1.90
795 843 5.221501 CCCTTCAAAATCAACTCACCACAAT 60.222 40.000 0.00 0.00 0.00 2.71
796 844 4.099266 CCCTTCAAAATCAACTCACCACAA 59.901 41.667 0.00 0.00 0.00 3.33
797 845 3.636300 CCCTTCAAAATCAACTCACCACA 59.364 43.478 0.00 0.00 0.00 4.17
798 846 3.888930 TCCCTTCAAAATCAACTCACCAC 59.111 43.478 0.00 0.00 0.00 4.16
799 847 4.144297 CTCCCTTCAAAATCAACTCACCA 58.856 43.478 0.00 0.00 0.00 4.17
800 848 3.507622 CCTCCCTTCAAAATCAACTCACC 59.492 47.826 0.00 0.00 0.00 4.02
801 849 4.398319 TCCTCCCTTCAAAATCAACTCAC 58.602 43.478 0.00 0.00 0.00 3.51
802 850 4.722526 TCCTCCCTTCAAAATCAACTCA 57.277 40.909 0.00 0.00 0.00 3.41
803 851 5.565637 GCTTTCCTCCCTTCAAAATCAACTC 60.566 44.000 0.00 0.00 0.00 3.01
804 852 4.281941 GCTTTCCTCCCTTCAAAATCAACT 59.718 41.667 0.00 0.00 0.00 3.16
805 853 4.039124 TGCTTTCCTCCCTTCAAAATCAAC 59.961 41.667 0.00 0.00 0.00 3.18
806 854 4.222336 TGCTTTCCTCCCTTCAAAATCAA 58.778 39.130 0.00 0.00 0.00 2.57
807 855 3.843422 TGCTTTCCTCCCTTCAAAATCA 58.157 40.909 0.00 0.00 0.00 2.57
812 860 2.176798 TCCTTTGCTTTCCTCCCTTCAA 59.823 45.455 0.00 0.00 0.00 2.69
813 861 1.780309 TCCTTTGCTTTCCTCCCTTCA 59.220 47.619 0.00 0.00 0.00 3.02
816 864 1.076187 CCTTCCTTTGCTTTCCTCCCT 59.924 52.381 0.00 0.00 0.00 4.20
819 867 1.815613 GAGCCTTCCTTTGCTTTCCTC 59.184 52.381 0.00 0.00 38.11 3.71
821 869 1.620822 TGAGCCTTCCTTTGCTTTCC 58.379 50.000 0.00 0.00 38.11 3.13
847 895 4.086706 AGAAAACGAATTGGGTCAGTCT 57.913 40.909 0.00 0.00 0.00 3.24
853 901 2.296190 GCCTGAAGAAAACGAATTGGGT 59.704 45.455 0.00 0.00 0.00 4.51
888 936 4.721132 TCCCTTAATTAATTAGGGCGTGG 58.279 43.478 24.30 14.29 37.96 4.94
889 937 5.617252 TCTCCCTTAATTAATTAGGGCGTG 58.383 41.667 24.30 18.48 37.96 5.34
890 938 5.899631 TCTCCCTTAATTAATTAGGGCGT 57.100 39.130 24.30 0.00 37.96 5.68
896 944 8.836413 CGCTTCAACATCTCCCTTAATTAATTA 58.164 33.333 3.71 3.71 0.00 1.40
916 964 1.059098 ATAGATCCATGGCCGCTTCA 58.941 50.000 6.96 0.00 0.00 3.02
942 990 2.581354 GGTGCTCGGATGACTGCT 59.419 61.111 0.00 0.00 0.00 4.24
947 995 0.669318 GTGTTTCGGTGCTCGGATGA 60.669 55.000 0.00 0.00 39.77 2.92
960 1018 5.389411 GGCTTTGTGTTTGAGTTTGTGTTTC 60.389 40.000 0.00 0.00 0.00 2.78
971 1029 3.096092 ACTTCTTGGGCTTTGTGTTTGA 58.904 40.909 0.00 0.00 0.00 2.69
982 1040 4.070716 CTCATGATGGATACTTCTTGGGC 58.929 47.826 0.00 0.00 42.62 5.36
995 1053 5.430886 TGTATTTGTGGTCTCTCATGATGG 58.569 41.667 0.00 0.00 0.00 3.51
1015 1073 5.107298 GCTTGTGCTTGTGTTTGTTTTTGTA 60.107 36.000 0.00 0.00 36.03 2.41
1065 1123 2.690510 GGGGCTCCTCCTTGCTCT 60.691 66.667 0.00 0.00 34.39 4.09
1080 1138 4.358841 TCCACCATTGTGCCCGGG 62.359 66.667 19.09 19.09 41.35 5.73
1320 1381 2.989824 ACGTCCTCCGGAGTGGTG 60.990 66.667 29.25 17.81 42.24 4.17
1321 1382 2.989824 CACGTCCTCCGGAGTGGT 60.990 66.667 29.25 19.97 42.24 4.16
1358 1419 1.736586 CCGGAGATGAAGACGAGGG 59.263 63.158 0.00 0.00 0.00 4.30
1369 1430 2.058595 CGTTGTCCCTCCCGGAGAT 61.059 63.158 16.69 0.00 43.19 2.75
1424 1485 0.732571 CAGCACCGTGTTCTTGTTGT 59.267 50.000 0.00 0.00 0.00 3.32
1428 1492 1.564622 CGACAGCACCGTGTTCTTG 59.435 57.895 0.00 0.00 0.00 3.02
1429 1493 2.244651 GCGACAGCACCGTGTTCTT 61.245 57.895 0.00 0.00 44.35 2.52
1430 1494 2.661866 GCGACAGCACCGTGTTCT 60.662 61.111 0.00 0.00 44.35 3.01
1712 1779 4.183223 TGCCTGCCCAAATGATAATACT 57.817 40.909 0.00 0.00 0.00 2.12
1713 1780 5.473066 AATGCCTGCCCAAATGATAATAC 57.527 39.130 0.00 0.00 0.00 1.89
1714 1781 5.221682 CCAAATGCCTGCCCAAATGATAATA 60.222 40.000 0.00 0.00 0.00 0.98
1715 1782 4.445162 CCAAATGCCTGCCCAAATGATAAT 60.445 41.667 0.00 0.00 0.00 1.28
1716 1783 3.118334 CCAAATGCCTGCCCAAATGATAA 60.118 43.478 0.00 0.00 0.00 1.75
1717 1784 2.435069 CCAAATGCCTGCCCAAATGATA 59.565 45.455 0.00 0.00 0.00 2.15
1718 1785 1.210967 CCAAATGCCTGCCCAAATGAT 59.789 47.619 0.00 0.00 0.00 2.45
1719 1786 0.614294 CCAAATGCCTGCCCAAATGA 59.386 50.000 0.00 0.00 0.00 2.57
1721 1788 1.300634 GCCAAATGCCTGCCCAAAT 59.699 52.632 0.00 0.00 0.00 2.32
1722 1789 2.749016 GCCAAATGCCTGCCCAAA 59.251 55.556 0.00 0.00 0.00 3.28
1750 1817 3.121030 AGTCGCGTGCTGAATGGC 61.121 61.111 5.77 0.00 0.00 4.40
1751 1818 1.086067 ATCAGTCGCGTGCTGAATGG 61.086 55.000 28.62 9.63 44.82 3.16
1752 1819 0.025898 CATCAGTCGCGTGCTGAATG 59.974 55.000 28.62 23.20 44.82 2.67
1753 1820 1.699656 GCATCAGTCGCGTGCTGAAT 61.700 55.000 28.62 18.72 44.82 2.57
1754 1821 2.382746 GCATCAGTCGCGTGCTGAA 61.383 57.895 28.62 17.72 44.82 3.02
1755 1822 2.810887 GCATCAGTCGCGTGCTGA 60.811 61.111 27.68 27.68 45.59 4.26
1777 1844 2.870341 TATTGATCTGCACGCGCGC 61.870 57.895 32.58 23.91 42.97 6.86
1874 1953 4.693283 TCATCACCACAATATCGGTCTTC 58.307 43.478 0.00 0.00 31.41 2.87
2015 2094 0.971959 ACACGCCCCAGTCGGTATTA 60.972 55.000 0.00 0.00 0.00 0.98
2081 2190 1.490490 GGAGTCATGGCCTGGATGTTA 59.510 52.381 3.32 0.00 0.00 2.41
2082 2191 0.257039 GGAGTCATGGCCTGGATGTT 59.743 55.000 3.32 0.00 0.00 2.71
2154 2263 1.966451 CCTTCCTTGTGCGGTCCAC 60.966 63.158 0.00 0.00 44.90 4.02
2255 2403 0.032403 CGAACGGGTTGTAGTGGTCA 59.968 55.000 0.00 0.00 0.00 4.02
2297 2445 3.365265 CTGCAGCGGTGGAAACCC 61.365 66.667 17.54 0.00 0.00 4.11
2519 2895 3.138304 TGGATGAACCAACAAGAAGACG 58.862 45.455 0.00 0.00 46.75 4.18
2566 2946 7.284716 ACACACCGATTGTTGTAGATAGATAGA 59.715 37.037 0.00 0.00 35.67 1.98
2567 2947 7.426410 ACACACCGATTGTTGTAGATAGATAG 58.574 38.462 0.00 0.00 35.67 2.08
2589 2985 4.281941 TCCTCACCTGCTCATATCATACAC 59.718 45.833 0.00 0.00 0.00 2.90
2590 2986 4.482990 TCCTCACCTGCTCATATCATACA 58.517 43.478 0.00 0.00 0.00 2.29
2594 2990 3.106827 TGTTCCTCACCTGCTCATATCA 58.893 45.455 0.00 0.00 0.00 2.15
2595 2991 3.827008 TGTTCCTCACCTGCTCATATC 57.173 47.619 0.00 0.00 0.00 1.63
2596 2992 3.776969 TCTTGTTCCTCACCTGCTCATAT 59.223 43.478 0.00 0.00 0.00 1.78
2858 3351 2.366266 AGAGGTTGTTGTACTTGCCGTA 59.634 45.455 0.00 0.00 0.00 4.02
2862 3355 4.994852 TGATGTAGAGGTTGTTGTACTTGC 59.005 41.667 0.00 0.00 0.00 4.01
2896 3389 2.456840 CCCCACTCCCCTTCCTCT 59.543 66.667 0.00 0.00 0.00 3.69
2990 3495 1.011333 CGAGAGGAGGAGAAGACGAC 58.989 60.000 0.00 0.00 0.00 4.34
3007 3512 2.538861 GTCGACGATGTCTCTATCACGA 59.461 50.000 0.00 0.00 35.14 4.35
3010 3515 2.817901 TCGTCGACGATGTCTCTATCA 58.182 47.619 34.97 10.04 44.22 2.15
3023 3549 1.977412 GAAGCAGTTAGTGTCGTCGAC 59.023 52.381 18.51 18.51 0.00 4.20
3030 3559 4.323104 GGAAGATGGAGAAGCAGTTAGTGT 60.323 45.833 0.00 0.00 0.00 3.55
3032 3561 4.100373 AGGAAGATGGAGAAGCAGTTAGT 58.900 43.478 0.00 0.00 0.00 2.24
3033 3562 4.692228 GAGGAAGATGGAGAAGCAGTTAG 58.308 47.826 0.00 0.00 0.00 2.34
3034 3563 3.131223 CGAGGAAGATGGAGAAGCAGTTA 59.869 47.826 0.00 0.00 0.00 2.24
3035 3564 2.093764 CGAGGAAGATGGAGAAGCAGTT 60.094 50.000 0.00 0.00 0.00 3.16
3036 3565 1.480137 CGAGGAAGATGGAGAAGCAGT 59.520 52.381 0.00 0.00 0.00 4.40
3103 3644 2.203294 GGGTGACAAACGTGGCCT 60.203 61.111 3.32 0.00 0.00 5.19
3164 3705 2.882876 GGCGGAGACTACAGCGAA 59.117 61.111 0.00 0.00 32.23 4.70
3169 3710 2.753043 GGGTCGGCGGAGACTACA 60.753 66.667 7.21 0.00 40.76 2.74
3217 3758 2.190398 ACATGTCACCATAGGGCCTA 57.810 50.000 17.16 17.16 37.90 3.93
3244 3785 1.684450 TCTGCTGTGTCACGGAGTTTA 59.316 47.619 16.28 0.00 41.61 2.01
3260 3801 3.565482 TCCTTGTTCTTGTTGATGTCTGC 59.435 43.478 0.00 0.00 0.00 4.26
3262 3803 4.780815 TGTCCTTGTTCTTGTTGATGTCT 58.219 39.130 0.00 0.00 0.00 3.41
3314 3855 0.815734 GGCTTGGAGTACTCGTAGCA 59.184 55.000 31.78 18.16 37.98 3.49
3361 3902 3.670377 GGCCACTTGTCGTTGGGC 61.670 66.667 0.00 0.00 43.86 5.36
3408 3949 1.302511 ATTGAAAGAGGCGGTGCGT 60.303 52.632 0.00 0.00 0.00 5.24
3452 3993 4.058817 GTTGCTAAGACTTGTAGTGCACT 58.941 43.478 25.12 25.12 0.00 4.40
3461 4002 5.983540 AGGGAGATTAGTTGCTAAGACTTG 58.016 41.667 0.00 0.00 29.02 3.16
3501 4042 4.216257 TGAAAGCAGCTTAGCTACAAAAGG 59.784 41.667 8.45 0.00 45.89 3.11
3543 4084 6.430864 TGCCTATCAACCAATGGATAAAGAA 58.569 36.000 6.16 0.00 0.00 2.52
3588 4131 5.048713 GGTGATCCGAAGAAGAAACAATGTT 60.049 40.000 0.00 0.00 0.00 2.71
3624 4167 7.147143 TGTGGCAAAGTAATTAAAGCGATAA 57.853 32.000 0.00 0.00 0.00 1.75
3626 4169 5.637006 TGTGGCAAAGTAATTAAAGCGAT 57.363 34.783 0.00 0.00 0.00 4.58
3627 4170 5.182190 TGATGTGGCAAAGTAATTAAAGCGA 59.818 36.000 0.00 0.00 0.00 4.93
3629 4172 6.868339 AGTTGATGTGGCAAAGTAATTAAAGC 59.132 34.615 0.00 0.00 0.00 3.51
3630 4173 8.816640 AAGTTGATGTGGCAAAGTAATTAAAG 57.183 30.769 0.00 0.00 0.00 1.85
3631 4174 9.606631 AAAAGTTGATGTGGCAAAGTAATTAAA 57.393 25.926 0.00 0.00 0.00 1.52
3632 4175 9.606631 AAAAAGTTGATGTGGCAAAGTAATTAA 57.393 25.926 0.00 0.00 0.00 1.40
3655 4198 6.208402 TGCTAAGAATGTCACATAGGCAAAAA 59.792 34.615 0.00 0.00 34.09 1.94
3656 4199 5.709631 TGCTAAGAATGTCACATAGGCAAAA 59.290 36.000 0.00 0.00 34.09 2.44
3657 4200 5.252547 TGCTAAGAATGTCACATAGGCAAA 58.747 37.500 0.00 0.00 34.09 3.68
3658 4201 4.842574 TGCTAAGAATGTCACATAGGCAA 58.157 39.130 0.00 0.00 34.09 4.52
3659 4202 4.486125 TGCTAAGAATGTCACATAGGCA 57.514 40.909 0.00 0.00 35.48 4.75
3660 4203 5.303971 AGATGCTAAGAATGTCACATAGGC 58.696 41.667 0.00 0.00 0.00 3.93
3661 4204 9.579768 GTATAGATGCTAAGAATGTCACATAGG 57.420 37.037 0.00 0.00 0.00 2.57
3664 4207 9.433153 CATGTATAGATGCTAAGAATGTCACAT 57.567 33.333 0.00 0.00 0.00 3.21
3665 4208 7.874528 CCATGTATAGATGCTAAGAATGTCACA 59.125 37.037 4.33 0.00 0.00 3.58
3666 4209 7.875041 ACCATGTATAGATGCTAAGAATGTCAC 59.125 37.037 4.33 0.00 0.00 3.67
3667 4210 7.966812 ACCATGTATAGATGCTAAGAATGTCA 58.033 34.615 4.33 0.00 0.00 3.58
3668 4211 9.929180 TTACCATGTATAGATGCTAAGAATGTC 57.071 33.333 4.33 0.00 0.00 3.06
3671 4214 9.442047 GCTTTACCATGTATAGATGCTAAGAAT 57.558 33.333 15.08 0.00 0.00 2.40
3681 4224 7.417911 CCTTCTCAGTGCTTTACCATGTATAGA 60.418 40.741 0.00 0.00 0.00 1.98
3693 4236 0.475906 AGTGCCCTTCTCAGTGCTTT 59.524 50.000 0.00 0.00 0.00 3.51
3745 4288 4.907879 AGAAAACAGAAAAGGACAGCAG 57.092 40.909 0.00 0.00 0.00 4.24
3802 4346 4.517453 TCAACACTGAATTAAAACCCTCCG 59.483 41.667 0.00 0.00 0.00 4.63
3804 4348 5.300792 TGGTCAACACTGAATTAAAACCCTC 59.699 40.000 0.00 0.00 31.88 4.30
3831 4375 8.635765 ACAGGTATGACTCATTTATGTTTGTT 57.364 30.769 0.00 0.00 0.00 2.83
3880 4424 4.475135 GAGCCGGCTGAACCTCCC 62.475 72.222 38.41 13.51 35.61 4.30
3887 4431 2.759973 CCCTGTAGAGCCGGCTGA 60.760 66.667 38.41 19.79 0.00 4.26
3902 4446 5.068723 TGTTCGATCTAGATAGGAAACACCC 59.931 44.000 16.27 7.83 40.05 4.61
3904 4448 6.797454 AGTGTTCGATCTAGATAGGAAACAC 58.203 40.000 26.17 26.17 0.00 3.32
3938 4482 9.090692 GTTAAGACAATTGCGTACCTTCTTATA 57.909 33.333 5.05 0.00 0.00 0.98
3943 4487 4.142752 GGGTTAAGACAATTGCGTACCTTC 60.143 45.833 5.05 0.00 0.00 3.46
3958 4502 7.032598 AGAGATGATTTTCTTGGGGTTAAGA 57.967 36.000 0.00 0.00 35.02 2.10
3966 4510 6.479990 TGTGCGTATAGAGATGATTTTCTTGG 59.520 38.462 0.00 0.00 0.00 3.61
3986 4530 1.635844 TAAAGGCGAGTGTATGTGCG 58.364 50.000 0.00 0.00 0.00 5.34
4059 4605 9.712359 GATAAGATACATGATATACGTACGCAA 57.288 33.333 16.72 3.97 0.00 4.85
4063 4609 9.352191 AGGGGATAAGATACATGATATACGTAC 57.648 37.037 0.00 0.00 0.00 3.67
4076 4622 7.338449 TGCACAAAAGTAAAGGGGATAAGATAC 59.662 37.037 0.00 0.00 0.00 2.24
4086 4632 5.584251 ACACAAAATGCACAAAAGTAAAGGG 59.416 36.000 0.00 0.00 0.00 3.95
4096 4642 4.752146 TGATCAACACACAAAATGCACAA 58.248 34.783 0.00 0.00 0.00 3.33
4107 4653 3.829948 CTGCCAAAGATGATCAACACAC 58.170 45.455 0.00 0.00 0.00 3.82
4108 4654 2.229543 GCTGCCAAAGATGATCAACACA 59.770 45.455 0.00 0.00 0.00 3.72
4109 4655 2.229543 TGCTGCCAAAGATGATCAACAC 59.770 45.455 0.00 0.00 0.00 3.32
4110 4656 2.229543 GTGCTGCCAAAGATGATCAACA 59.770 45.455 0.00 0.00 0.00 3.33
4111 4657 2.730090 CGTGCTGCCAAAGATGATCAAC 60.730 50.000 0.00 0.00 0.00 3.18
4112 4658 1.469703 CGTGCTGCCAAAGATGATCAA 59.530 47.619 0.00 0.00 0.00 2.57
4113 4659 1.089112 CGTGCTGCCAAAGATGATCA 58.911 50.000 0.00 0.00 0.00 2.92
4114 4660 1.063174 GTCGTGCTGCCAAAGATGATC 59.937 52.381 0.00 0.00 0.00 2.92
4115 4661 1.089920 GTCGTGCTGCCAAAGATGAT 58.910 50.000 0.00 0.00 0.00 2.45
4116 4662 1.291184 CGTCGTGCTGCCAAAGATGA 61.291 55.000 0.00 0.00 0.00 2.92
4117 4663 1.133253 CGTCGTGCTGCCAAAGATG 59.867 57.895 0.00 0.00 0.00 2.90
4118 4664 1.291877 GACGTCGTGCTGCCAAAGAT 61.292 55.000 0.63 0.00 0.00 2.40
4119 4665 1.954146 GACGTCGTGCTGCCAAAGA 60.954 57.895 0.63 0.00 0.00 2.52
4120 4666 2.551270 GACGTCGTGCTGCCAAAG 59.449 61.111 0.63 0.00 0.00 2.77
4121 4667 2.970324 GGACGTCGTGCTGCCAAA 60.970 61.111 9.90 0.00 0.00 3.28
4122 4668 3.741830 TTGGACGTCGTGCTGCCAA 62.742 57.895 18.03 14.30 36.35 4.52
4135 4681 2.243602 TGTTGAGTAACCGGTTGGAC 57.756 50.000 30.08 20.37 39.21 4.02
4139 4685 6.713450 AGTTTCATATTGTTGAGTAACCGGTT 59.287 34.615 25.64 25.64 35.92 4.44
4140 4686 6.235664 AGTTTCATATTGTTGAGTAACCGGT 58.764 36.000 0.00 0.00 35.92 5.28
4205 4751 9.799106 GTGTAGGACACCCTTAGTTAGTATATA 57.201 37.037 0.00 0.00 43.05 0.86
4206 4752 8.703378 GTGTAGGACACCCTTAGTTAGTATAT 57.297 38.462 0.00 0.00 43.05 0.86
4234 4780 1.686325 CCTGCTAGTGGGGTATGCGT 61.686 60.000 0.00 0.00 0.00 5.24
4235 4781 1.069765 CCTGCTAGTGGGGTATGCG 59.930 63.158 0.00 0.00 0.00 4.73
4246 4792 9.507329 ACATTCAATTTATATACCACCTGCTAG 57.493 33.333 0.00 0.00 0.00 3.42
4276 4822 4.381411 GGGAGCCTGCTATACTTTACAAG 58.619 47.826 0.00 0.00 0.00 3.16
4277 4823 3.135895 GGGGAGCCTGCTATACTTTACAA 59.864 47.826 0.00 0.00 0.00 2.41
4278 4824 2.704065 GGGGAGCCTGCTATACTTTACA 59.296 50.000 0.00 0.00 0.00 2.41
4279 4825 2.973406 AGGGGAGCCTGCTATACTTTAC 59.027 50.000 0.00 0.00 0.00 2.01
4280 4826 3.346146 AGGGGAGCCTGCTATACTTTA 57.654 47.619 0.00 0.00 0.00 1.85
4281 4827 2.173569 CAAGGGGAGCCTGCTATACTTT 59.826 50.000 0.00 0.00 0.00 2.66
4282 4828 1.771255 CAAGGGGAGCCTGCTATACTT 59.229 52.381 0.00 0.00 0.00 2.24
4283 4829 1.428869 CAAGGGGAGCCTGCTATACT 58.571 55.000 0.00 0.00 0.00 2.12
4286 4832 2.922234 GCAAGGGGAGCCTGCTAT 59.078 61.111 0.00 0.00 0.00 2.97
4303 4849 1.376037 GGAACGAAGTGAGGGCAGG 60.376 63.158 0.00 0.00 45.00 4.85
4335 4881 2.202932 CAAGACTGGGATCCGCCG 60.203 66.667 5.45 0.00 37.63 6.46
4338 4884 0.322456 TTTGGCAAGACTGGGATCCG 60.322 55.000 5.45 0.00 0.00 4.18
4377 4923 9.887406 GAAATTTTCAATGCATGATGAACTTTT 57.113 25.926 12.34 13.60 38.03 2.27
4378 4924 9.058174 TGAAATTTTCAATGCATGATGAACTTT 57.942 25.926 12.34 13.74 38.03 2.66
4379 4925 8.500773 GTGAAATTTTCAATGCATGATGAACTT 58.499 29.630 13.21 7.50 42.15 2.66
4380 4926 7.876068 AGTGAAATTTTCAATGCATGATGAACT 59.124 29.630 13.21 4.17 42.15 3.01
4381 4927 7.955324 CAGTGAAATTTTCAATGCATGATGAAC 59.045 33.333 22.09 3.38 46.72 3.18
4382 4928 8.024146 CAGTGAAATTTTCAATGCATGATGAA 57.976 30.769 22.09 9.30 46.72 2.57
4383 4929 7.589574 CAGTGAAATTTTCAATGCATGATGA 57.410 32.000 22.09 0.00 46.72 2.92
4440 4986 9.077885 ACATTTTTCCAAATACTCACTACACAT 57.922 29.630 0.00 0.00 30.90 3.21
4441 4987 8.458573 ACATTTTTCCAAATACTCACTACACA 57.541 30.769 0.00 0.00 30.90 3.72
4442 4988 9.394477 GAACATTTTTCCAAATACTCACTACAC 57.606 33.333 0.00 0.00 30.90 2.90
4443 4989 9.126151 TGAACATTTTTCCAAATACTCACTACA 57.874 29.630 0.00 0.00 30.90 2.74
4446 4992 8.859090 TGATGAACATTTTTCCAAATACTCACT 58.141 29.630 0.00 0.00 30.50 3.41
4447 4993 9.643693 ATGATGAACATTTTTCCAAATACTCAC 57.356 29.630 0.00 0.00 35.45 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.