>input_sequence_31981
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-----------------ATGAGAGACCACAAATACAAAAACAAACACAAGCACAAGCACACAACCCACCGGCGTGAAGGT
GAAGAGCAAGGAGGAGCCCCGGGCACAATGGTGGAGAGCCGCAGCACCATCGCCTTCTTCGGGACCTCCAGGCCACCGGT
GGCGCTGGACCTCTTCTCGTGCCCAGTGAACCCGCCGCCATCGTCTGCGCGGGACGAGCAGCGCCTCACCGACGGCGTGT
CGTACAACCACAACGGCCGGGCAATCCCCGCGCCGGCGCTCAAGGAGCTCCTGTCCTTCCTGGCC---AAGAAGGACACC
GCGCTGGCCCTGGCCGGCGGCACCACTCCGGAGGACGTGGACAAGGGCGGTGTCACCGCCCTCGTCTTCATCTCCGGGAG
GGACAACGGCCTGGAGACGCTCCATGTGGCCCTGCGCGCCGCAGA---CAACAAGAACACGGTGCTGTCGCTGGCCGACG
TCTACGGCGCCGGCACCTTCGGCGGGGTCCGAATGGAGGACAGTGGCTGCCTGGCCGGCGGCTTCGAGGCGGGCGGCCTC
ACCGTCGGGCACTCGCTGGTGTACGTGTCCACCAAGGGGCCGGCGGCAGCACGGCGCACTCCGTGTCCGTGGACCGTGGT
GTACAAGACCAACCTTGCCGACGGCAGGACGGAGCGCCTCACTCCGCCGGGTAACCATCAGATCTGATCTGCT---CTCT
CATATCGTATTCGTATATAGTATTATCATTTGGGCAGGCATTTGGCCATGGCCATGGCCATTCAGCACGCGACTGATGCG
TCTGCGCGCGTGCAGATCAATACGACCTGAACCCGGCCGTGTCGCCGTCCGGGCAGAGGGTGGCGGTGGCCAACTTCCGG
T------------CCGGCGAGGTCGGCCGCCTGAAGACCGATATTGTGGTGATGAACGTGGACCGGGAGGCGCAGGGCGG
GCTTGGGCGCAGCATCCTCATCAAGGACGGCGGGTGGCCGACGTGGGGCAGCGACAACGTCATCTTCTTCCACCGAGGGG
TGGACACCAAGGAT------------------AATACCGACTGGGGCGTGTACCGGTACGACCTCACCACCAAGGAAA--
----------CCGTCAAGGTGACCCCTGATAACATCCAGGCCATGACTCCGGCGGCCATCGACGAGACGACGGTGGCCGT
GGCCGTCACCCGGGAGACCTCCGTGGACCGCACAAGG------------------AAGGAGCAGTACCGCCACATCGAGA
TCTT------TGAGGTCGGCAAGCCTGCCAG---CCCGGTGGTGATCACCCATCG------CACGACGCC------GTTG
GCTGACCACTACAACCCGTTCGTGCTCGACGGCGGCAGCCGCGTGGGTTTCCACCGCTGCAGAACCGACGATGACAAGGT
GAATACTACCGCTGATCCCAAGAAGAAGCAT---------------------AAGGACGGCGGGC---------TGGCCG
GCGTGTTCCCAAGCATCAGCAATGACGGCTCCAAGATCTGCTACGTGGACAACGAGTTCAGAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCGTGTGGGTCGCCGACGA---AAAG---GGGCCGCGACCAGTCCATTCGGTACGTCGTCAAATATA
--TATATATTCTCTCGTCTTCTTGTTGGTTCATCCATGAAA----TATATCTATCTATCTATCTATCTATCTATC-----
-----------TACAACAATCGGTGTGTATGA------------------------------------------------
----TATGAGCAGGTGAGGAACAAGATCAGAGTCTTGTCCACTACGTGGAACCAAGACATGAGC----------------
--AAGGACAC------------------CATCTACTTCTGCGAGGGCACGGCCGACCACCTG---------CAGATCTGT
GCCCTCGAAGGCGCCTCCGAGCTCCGGCCCAATGACCGGAACATGAGGCGCCTCACCAAGGGCAAGTTCAACGACGCCTT
CCCCTCAAGCAACCCGGCCGGGACCAAGTTTGTGTTCCGGTCGACGCGCGACAGATCCGGTAGGCCGGAGTACGGCAAGT
ACAACAACCTCTACATCATGGAGGACGCAGAGGAAGGGGAGTGGGGCGAAGGCACG------------GTGACGCAGCTC
ACCGACGGGCCCTGGACCGACAGCCATTGCAGCTGGTCGCCCAGGGGTGATTGGGTCGTCTTCTCCTCCTCTCGTGAT--
-------------------AGAGACATCGTCGAC---GACACTAACTGCTTCTCCATCTTCCTCGTCCTAGCCACCGACC
CCAAGGTGCTGGTGCGGGTCATG------------TCCCTGGCAGGCCACGTTTGTCACCCCGTCTTCAGCCCGGACATG
GACAACATCGTCGTCACCTCCGACTTCGCTGTAGTCTCCGCCGACCCGGTGTCTCTGCCCATCTTCATTGCCTCCGTTAG
GCCCTATGGTGACATGTTCTCCATTAAACTCCGTGACACAGCAGACATCAACAAGAACAAGGACATCGTGGAGTTCCACC
GCATCACACACACCTGCTACGAGTACTCCAAGCCTACATGGACCATCTATTTTGGTGACGAGCCCAACGACAAGTGGCCA
ACCAATAGCGGTGCGGCTACGGGCCCCTACGCACCGCCTCTTTCAATGCATTGGTGCTTAGGTGAGGTGCTAAGTGCACT
ACAAGTCTTAGCAACTAATCTCCCTAATGCATAG----------------------------------------------
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-------------------------------------------------------------------------------
>chr3D_1_TraesCS3D01G516400
TTGGATCTTGAAGGTACCACATCACATGCAATACAAATTTACTACTTGTTTAGGAGCATGAAGAAAGCCTAGGGATGCCA
CCATCCGGTGATGCGCTGCTAAGAAGTATTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAAATACGGATGTATC
AAGTCACGTTTTAGTATTAGGTACATCCGTATCTAAAAAAAAAATCTAAGACAAGAATTTTTGGACGGAGGGAGTAGATG
ACGTAAATTAAGTGCTAACATTGTTCTGGTTTTCTAAAGTTTGATTCATGATGACAATGATTTTCCTAA-AAACGAAGAG
GAAAGAAGAGGGGGGTAATT----TGGAAACGAATTTGCGTCATTC--------GCTCCATTTGATCA------------
-------------------CATCCTGTGTTGAACACTATAACATTAATACACTATAAAATTAATACACTATTAAATACAA
AGTTGAATCACTTATTTTGAGACGGAGGGAG---TAGTTAATTCATAATAGCTAAATGTTAGGCCCTATTTGGTTCATAA
GTCTTACGATTTTTTTTAGTCCCAACTTATAAGTCCTAAGTCCCTAAAAAGTCTCTACCTGTTTGGTTCCTGCGACTTAA
CATGGACTAAAAGACCATATTACAACTATAAGTCCCTATAAGACTCTCCTTGAAAGTCTTATTTTATAAGTCCCAAATGT
CCACTTTAAGTCCCTATAAGCCCCTCATGTTTGGTTTAGATGGGACTTAAACGGACTTTTTTAAGTCCCCACACCAATAA
GTCCCTGTAACCAAACACCCTCTTAGTCGACTGACTTTAGCTATTGTGGTGAGTTGATTTTGAAGGGAGGAAAGCAAAGG
AAGGCTCAAAAAATAGACTGACCCAATTCGTTTTCTTCAGGCAACTGACATATAGCCACGCCCTAATTAATTAAGGGAGA
TGTTGAAGCGGCCATGGATCTATAAATCCAGCAGTCATCCGAGCA----------CCGAAACACAAACTCAAACACAAAG
CCCAAGAAGTATCCATCATGAGAGACCACAAATACAAAAACAAACACAAGCACAAGCACACAACCCACCGGCGTGAAGGT
GAAGAGCAAGGAGGAGCCCCGGGCACAATGGTGGAGAGCCGCAGCACCATCGCCTTCTTCGGGACCTCCAGGCCACCGGT
GGCGCTGGACCTCTTCTCGTGCCCAGTGAACCCGCCGCCATCGTCTGCGCGGGACGAGCAGCGCCTCACCGACGGCGTGT
CGTACAACCACAACGGCCGGGCAATCCCCGCGCCGGCGCTCAAGGAGCTCCTGTCCTTCCTGGCC---AAGAAGGACACC
GCGCTGGCCCTGGCCGGCGGCACCACTCCGGAGGACGTGGACAAGGGCGGTGTCACCGCCCTCGTCTTCATCTCCGGGAG
GGACAACGGCCTGGAGACGCTCCATGTGGCCCTGCGCGCCGCAGA---CAACAAGAACACGGTGCTGTCGCTGGCCGACG
TCTACGGCGCCGGCACCTTCGGCGGGGTCCGAATGGAGGACAGTGGCTGCCTGGCCGGCGGCTTCGAGGCGGGCGGCCTC
ACCGTCGGGCACTCGCTGGTGTACGTGTCCACCAAGGGGCCGGCGGCAGCACGGCGCACTCCGTGTCCGTGGACCGTGGT
GTACAAGACCAACCTTGCCGACGGCAGGACGGAGCGCCTCACTCCGCCGGGTAACCATCAGATCTGATCTGCT---CTCT
CATATCGTATTCGTATATAGTATTATCATTTGGGCAGGCATTTGGCCATGGCCATGGCCATTCAGCACGCGACTGATGCG
TCTGCGCGCGTGCAGATCAATACGACCTGAACCCGGCCGTGTCGCCGTCCGGGCAGAGGGTGGCGGTGGCCAACTTCCGG
T------------CCGGCGAGGTCGGCCGCCTGAAGACCGATATTGTGGTGATGAACGTGGACCGGGAGGCGCAGGGCGG
GCTTGGGCGCAGCATCCTCATCAAGGACGGCGGGTGGCCGACGTGGGGCAGCGACAACGTCATCTTCTTCCACCGAGGGG
TGGACACCAAGGAT------------------AATACCGACTGGGGCGTGTACCGGTACGACCTCACCACCAAGGAAA--
----------CCGTCAAGGTGACCCCTGATAACATCCAGGCCATGACTCCGGCGGCCATCGACGAGACGACGGTGGCCGT
GGCCGTCACCCGGGAGACCTCCGTGGACCGCACAAGG------------------AAGGAGCAGTACCGCCACATCGAGA
TCTT------TGAGGTCGGCAAGCCTGCCAG---CCCGGTGGTGATCACCCATCG------CACGACGCC------GTTG
GCTGACCACTACAACCCGTTCGTGCTCGACGGCGGCAGCCGCGTGGGTTTCCACCGCTGCAGAACCGACGATGACAAGGT
GAATACTACCGCTGATCCCAAGAAGAAGCAT---------------------AAGGACGGCGGGC---------TGGCCG
GCGTGTTCCCAAGCATCAGCAATGACGGCTCCAAGATCTGCTACGTGGACAACGAGTTCAGAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCGTGTGGGTCGCCGACGA---AAAG---GGGCCGCGACCAGTCCATTCGGTACGTCGTCAAATATA
--TATATATTCTCTCGTCTTCTTGTTGGTTCATCCATGAAA----TATATCTATCTATCTATCTATCTATCTATC-----
-----------TACAACAATCGGTGTGTATGA------------------------------------------------
----TATGAGCAGGTGAGGAACAAGATCAGAGTCTTGTCCACTACGTGGAACCAAGACATGAGC----------------
--AAGGACAC------------------CATCTACTTCTGCGAGGGCACGGCCGACCACCTG---------CAGATCTGT
GCCCTCGAAGGCGCCTCCGAGCTCCGGCCCAATGACCGGAACATGAGGCGCCTCACCAAGGGCAAGTTCAACGACGCCTT
CCCCTCAAGCAACCCGGCCGGGACCAAGTTTGTGTTCCGGTCGACGCGCGACAGATCCGGTAGGCCGGAGTACGGCAAGT
ACAACAACCTCTACATCATGGAGGACGCAGAGGAAGGGGAGTGGGGCGAAGGCACG------------GTGACGCAGCTC
ACCGACGGGCCCTGGACCGACAGCCATTGCAGCTGGTCGCCCAGGGGTGATTGGGTCGTCTTCTCCTCCTCTCGTGAT--
-------------------AGAGACATCGTCGAC---GACACTAACTGCTTCTCCATCTTCCTCGTCCTAGCCACCGACC
CCAAGGTGCTGGTGCGGGTCATG------------TCCCTGGCAGGCCACGTTTGTCACCCCGTCTTCAGCCCGGACATG
GACAACATCGTCGTCACCTCCGACTTCGCTGTAGTCTCCGCCGACCCGGTGTCTCTGCCCATCTTCATTGCCTCCGTTAG
GCCCTATGGTGACATGTTCTCCATTAAACTCCGTGACACAGCAGACATCAACAAGAACAAGGACATCGTGGAGTTCCACC
GCATCACACACACCTGCTACGAGTACTCCAAGCCTACATGGACCATCTATTTTGGTGACGAGCCCAACGACAAGTGGCCA
ACCAATAGCGGTGCGGCTACGGGCCCCTACGCACCGCCTCTTTCAATGCATTGGTGCTTAGGTGAGGTGCTAAGTGCACT
ACAAGTCTTAGCAACTAATCTCCCTAATGCATAGGTGCTTACCTTTTGTAGCTAAGCTGCTTTCATTTTATTTAGCAACT
AAATTCTTTATCCATTGGTTGATAGGCATTTT--GTAGGTCCACATGCTTAACATTGTTTCTTCTTCGGATCACCAAAGT
GCTCTCTTATCGCTTTAATTACTTTGCCACATCAACTTTTTTGCCTATGTGACATTCTTAGCATCTATACATGGTAAAGC
ACTGAGAAGGGCACTCTCCATGTTACCCCTATACAGGAGTACTACCACTGCTGTCCTTTTCTGTTTTCTATAAATAAAGG
GGTGTCATTTTAATATA-TTTTTAACGGAGGGTTTTAATTCAGTGTTGACCAACAACAAACATAAATGAGTCATACCTGT
TAGGAAATTGACTCCACCTATGGGGGAGGTTCAGCCGGCTCTACAGGGTGTTTCCTATCTAGATCGAACACTTTAGTCTA
ATATAAGAAGGTACGCAATTGTCTTAACCCCAAGAAAATCATCTCTATACGCACATACACTCGCCTTTATGAATCGTTAA
AAAAGAGAGAAG--ATCATCTCTATAAATAGAGCACCACCCTAGTTGCGTACGTATATCATGTATCTTATCCCCTTTACT
TTTGTGCATTTTGTGTGTTGATCATCTTTGGCAGCACGACGTCCAACCGGTTACTCAACAATATGAAACTAGTATACATC
TAAACTGGATTTTTTAAGAAAATACTTAACTATATACTAACTAAGGGTGTCCTACACCAACGCATACCCCACTAGCAGGT
GGTATATAAATTGAATGTAAACTTGTAAAGTATAGCAGGCTCCCCTTGCCTGCCCTCACTTCGTTCCCAAGGGGCGACTC
CGGCGGATCCCAGTCTTGCCAAAATGTTCGCCATATATTAAAAAAAGTTCATCATGCATTGAAAATTTCACTGTATACAA
AAAATGTTCACAATATATCAAAAATATGTGTAGTGAGTATTTGGAAAAATGTTCATCATATAAAGAAAAAAATGTTCGT
>chr7D_7
------CTTGAAGGTATCACATGCAATGCAATACAGATCAACTATTTGTTTAGGAGCATGAAGAAAGCCTAGGGATGCCA
CCATCCGTTGATGCGCTGCTGAGAAAA-----------------------------------------------------
------------------------------------------------------------------------AGTAGATG
ATGTAAATTAAGTGCTAACATTGATCTTGTTTACTAAAGTTTGATTCATCATGACAATGATTTTTC-AA-AAACGAAGAA
CAAAGAAGAGTGGAGTAATTAATGTGGA---GAAGTTGCGTCGTTTGTTCAAGGGCTCCATTTGATTGTAAAAT-GCATC
TTGCGGAAGATTAGCTATCCTTCCTGTGTGG-----------------------------------------AAATACAA
AGTATGTACCACCCCAAGTACATGTAGGAACTAGTAATTAATTAG-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TTAATGGAGA
TGTCGAAGCTGCTAAGGACCTATAAATCCGGCATCC-GAGC---------------------------------------
------------TCCTAATGAGAGCACATAAACACAAACACAA--------------------CCCACCGGCGCGATAA-
----------------------GCACAATGGTGGAGAGCCGCAGCACCATCGCCTTCTTCGGGACCTTCAGGCCAGCGGT
GGCGCTGGACCTCTTCTCAGTCCCAGTGAACCCGACGACATCGTCTGCACCGGACGAGCAGCGCCTCACCGACGGTAAGT
CGTACAACCAAAACGGCCAGGCCATCACGCCCGCGGCTCTCAAGGAGCTCCTGGCCAGGAACAGCCCCGCG---------
---------CTGGCCGGCGTTGCCACTCCGGATGACGTGGACAAGGGCCGTGTCACCGGCATCGTCTTTGTCTCCGAGAG
GGACAACGGCCTGGAGACGCTCCATGTGGCCCTGTGCGCCGCAGG---CAA---GACCACGGTGGTGTCGCTTGCCGACA
TCTACGGCACCGACACCTTCGGTGGGGTCCGAATGGAGGACAGCGGCTGCTTGGCCGGTGGCTTCGAGGTGGGCGGTCGC
ACCGTCGGGCACTCGCTGGTGTACGTGTCCACCAAGCAGCCGGCGGCGGCACGGCGCAC------TCCGTGGACCGTGGT
GTACAAGACCAACCTTGCCGACGGCAGGACGGAGCGCCTCACTCCGCCGGGTAAGAAACT-ATCTAATCTGGT---CTCT
CGTCGTGTATATATTTG-------------------GGCATTTGGCCATGGCCATGCA----------GCGACTGATAAG
TCT----GACTGCAGATCAATACGACCTGAACCCGGCCGTGTCGCCGTCCGGGAAGAGGGTGGCGGTGGCCAACTTCCGG
TTCAACCAGTGGACCGGCGAGATCGGCCGACTCAAGACGGATATCGTGGTGATGAACGTGGACCGGCAGGCGCAGGGTGG
GCTTGGGCGCAGCGTCCTCATCAAGGACGGCGGGTGGCCGACGTGGGGCAGCGACACCGTCATCTTCTTCCACCGAGGGG
TGGATACCATAGACAAAGCCAGTGGGAGGACCAATACTGCCTGGGGCGTGTACCGGTACGACCTCACCACCAAGGACG--
-------ACCCCGTCAAGGTGACCCCTGACGGCATCCAAGCCATGACTCCGGCGGCCATCAGCGAGACCAAGGTGGCGGT
GGCCGTCACCCGGGAGGGTACCCGGATAGCGATAGCGGTCGTGGATCGCGATAAAAAGGAACAGTACCGCCACATCGAGA
TCTATGACTATGAGGTCGGTAAGCTTGCCAG---CCCGGTGATAATCACCCATAG------CACGGTGCTCAATGGGTTT
GCAGATCACTACAGCCCGTTCGTGCTAGACGGGGGCACCCGTGTCGGTTTCCACCGCTGCATAACCGAC------AAGGA
GAATACTGCCGCTCCGGAGAACTTCAGCAAGCTGCAGAGCCCGCCGACGCAAAAGGACGTCGGGATCTACCGGATGGCCG
GCGTGTTCCCGAGCATCAACAAGGCGGGCACCAAGATCACCTACGTGGACAACGAGTTCA--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------AAACCGTGTGGGTCGCTGACGA---AAAGCACGGGCCGCGAGAAGCCCATAAGGTACGTCAAGGAGCTAT
TCTCACTCACATATGT------------------------------------------CTATCTACAGTTCTA-CACTCA
CATAGATACAATACAACAATCTGTAC------------------------------------------------------
TATGTATGAGCAGAACAAGGACAGCAACAAAATCTTGTCCACTACGTGGAACCAAGGCACGGAC----------------
--AAGGACACGGGCGAGGAAAAGGACATCGTCTACTTCTGCGTGGGCACGGCCTTCAGCACCGACTGCATAGAGATCTGT
GCCCTCGAGGGTGCCTCCGAGCTAGAGCACAATGACAGGAGAATGAAGACCCTCACCAACGGCAAGTACAACAACGCCTT
CCCGTCGAGCAACAAGGATGGGACCAAGTTGGTGTTCCGGTCGACGCGCAACAGAATGGGTAAGCCTGAGGACGTCAAGT
ACAAGAACCTCTACATCATGGAGGACGCGGACGAAGGGGAGTGGGGTTCAGGCACG------------GTGACGCAGCTC
ACCGACGGGCCCTGGACCGACAGCCACTGCACCTGGTCGCCCACCGATGACTGGATCGTCTTCTCCTCCTCCCGCGACAG
GGCGCCCGGCGCGCCGGACAGGGACATCCTCGAT---GCCGG---CTTTTTCTCTATCTTCCTCGTCCTAGCCACCGACC
CCAGTGTGTTGGTGCGGGTCATGCACAGCGCCGACTCCCTGGCCGGCCATGTCTGTCACCCCGTCTTCAGCCCCTTCAAG
GACAGCATCGTCGTCACCTCCGACATCGCCGGCGTCTCCGCCGACCCGGTCTCTTTGCCCATCTTCATCCACTCCGTCAG
GCCCTACGGTGACATCTTCACCATCAACCTCCGCGACAAAAATGACATCATGAAGAACAAGGATATCATGGAGTTCGACC
GCATCACGCACACCCGCTACGAGTACTCTACGCCCACCTGGACCAAGGATTTGGGTGACGACCTCAACAACAAGTGGAAA
ACC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>chr7B_7
------CTTGAAGGTATCACATGCAATGCAATACAGATCAACTATTTGTTTAGGAGCATGAAGAAAGCCTAGGGATGCAA
CTATCCGTTGATGCGCTGCTGAGAAAA-----------------------------------------------------
------------------------------------------------------------------------AGTAGATG
ATGTAAATTACGTGCTAACATTGATCTTGTTTACTAAAGTTTGATTCATTATGATAATGAGTTTTC-AA-AAACGAAGAA
CAAAGAAGAGGGGAGTAATT----TGAA---GAATTTGCGTCGTTCGTCG-AGAGCTCCATTTGATTGTAGAATGGCATC
TTGCGGAAGATTAGCTATCCATCCTGTGTGA-----------------------------------------AAATACAA
AGTATGTACCACCCCAAGTACATGTAGCAATTAATAGATTATTAG-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------TTAATGGAGA
TGTCGAAGCTGCCAAGGACCTATAAATCCGGCATCCAGAGC---------------------------------------
------------TCTTCATGAGAGCACACAAACACAAACACAAACACAACCCACAGGCGTTATG--------------A-
----------------------GCACAATGGTGGAGAACCGCAGCACCATCGCCTTCTTCGGGACCTTCAGGCCAGCGGT
GGCGCTGGACCTCTTCTCATGCCCAGTGAACCCGACGACAACGTCTGCGCCGGACGAGCAGCGCCTCACCGACGGTAAGT
CGTACAACCAGAACGGCCAGGCCATCACGCCGGCGGCTCTCAAGGAGCTCCTGGCCAAGAACAGCCCCGCG---------
---------CTGGCCGGCGTTGCCACTCCGGATGACGTGGACAAGGGCCGTGTCACCGGCATCGTCTTTGTCTCCGAGAG
GGACAACGGCCTGGAGACGCTCCATGTGGCCCTGCGCGCCGCAGG---CAA---GACCACGGTGGTGTCGCTGGCCGACA
TCTACGGCACCGACACCTTCGGCGGGGTCCGAATGGAGGACAGCGGCTGCTTGGCCGGTGGCTTCCAGGTGGGCGGTCGC
ACCGTCGGGCACTCGCTGGTGTACGTGTCCACCAAGGAGCCGGCGGCAGCACGGCGCAC------TCCGTGGACCGTGGT
GTACAAGACCAACCTTGCCGATGGCAGGACGGAGCGCCTCACTCCGCCGGGTAAGAAACT-ATCTAATCTGGTGGTCTCT
CGTCGTGTATATATTTG-------------------GGCACTTGGCCATGGCCATGCA----------GCGACTGATGCG
TCT----GCTTGCAGATCAATACGACCTGAACCCGGCCGTGTCGCCGTCCGGGAAGAGGGTGGCGGTGGCCAATTTCCGG
TTCAACCAGTGGACCGGCGAGATCGGCCGCCTCAAGACCGATATCGTGGTGATGAACGTGGACCGGCAGGCGCAGGGTGG
GCTTGGGCGCAGCGTCCTCATCAAGGACGGCGGGTGGCCGACGTGGGGCAGCGACACTGTCATCTTCTTCCACCGAGGGG
TGGATAGCATAGACACAGTCAGTGGGAGGACCAATACTGACTGGGGTGTGTACCGGTACGACCTCACCGCCAAGCAGGAC
AAGAACAACCCCTTCAAGGTGACCCCTGACGGCATCCAAGCCATGACTCCGGCGGCCATCAGCGAGACCAAGGTGGCGGC
GGCCGTCACCCGGGAGGGCACCCGGATAGCTATAGCGGTCGTGGATCGCGATAAAAAGGAACAGTACCGTCACATCGAGA
TCTATGA------GGTCGGCAAGCCTGCCAG---CCCGGTGATAATCACCCATAGGACGGGCACGGTGCCCGAGGGGCTG
GCAGACCACTACAGCCCGTTCGTGCTCGACGGCGGCAGCCGTATCGGTTTCCACCGCCAGCTAACCAAG------AAGGA
GAATACTACCGCTCAGAAGAACTTCAGCAAGCTGCAGAGCCCGGCGACGCACAAGGACGTCGGGATCTACCGGATGGCCG
GCGTGTTCCCAAGCATCCACATGGCGGGCACCAAGATCACCTACGTGGACAACGAGTTCAAAACACTGAAAAAAATAGCA
CGCTATAGCGCCGCTAATAGCACGCTATGGCGTGTAGAGAATTGCCTCGCTAAATTAATTTTTGTATAATGTCTCGCTAA
TAGCACGTTGTAGCGCGCTATAGCACGCTAATAGCATATTTTCAGAGGCCGCGCTATTTTCTGTAGCGCGCTATTTTTTT
CATTGGTTCAAAACCGTGTGGGTCGCCGACGATGGACAC---GAGCCGCAAGAAGCCCATACGGTACGTCAAAGAGCTAT
TCTCCTAA-------------TTGTTGGTTCATCAAATCAAATAGTATATATCTCTAGCTATCTACAGGATGATCACTCA
CATAGATACAATTTACGTAAGGTTTAGTAGATGAATTATGCTAGGTCTAGCATTTTCGGATCCAATTAATACAACGCTCG
TATGTATGAGCAGGACAGGAGCAACAACAACATCTTGTCCACAACGTGGAACCAAGGCAAGGACGAGGAAACGGGCAAGT
TAAAGGACAT------------------CGTCTACTTCTGCGTGGGCACGGCCTTCGGCACCGGCCCAATACAGATCTAT
GCTCTCGAAGACGCCTCCAATCCCTCACACAATGAACGGACCATGAGGCGCCTCACCAAGGGCAATTTCAACAACGCCTT
CCCCTCGAGCAACCGGGATGGGAGCAAGTTCGTGTTCCGGTCGACGCGCGACAGATCCGGTAAGCTGGAGGACGCCAAGT
ACAAGAACCTCTACATCATGGAGGACGCGGTATACGGGGAGTGGAGTGAAGATGAAGAAGGCACGGCAGTGAGGCAGCTC
ACTAACGGGCCCTGGATCGACAGTCACTGCACCTGGTCGCCCACTGATGATTGGATCGTCTTCTCCTCCTCCCGCGACAG
GGCGGCTGGCGCGCCAGAGAGGGACATCCTCGAC---GCCGG---CTGCTTCTCCATCTTTCTCGTCAAAGCCACCGACC
CCAGTGTGTTGGTGCGGGTCATGCACAGCGCCGACTCCCTGGCCGGCCATGTCTGCCACCCCGTCTTCAGCCCCTTCAAG
GACAGCATCGTCATCACCTCCGACGTCGCCGGCGTCTCGGCCGACCCGGTCTCTCTGCCCATCTTCATCCACTCCGTCAG
GCCCTACGGCGACATCTTCACCATCAAACTCCGAGACAAGAAGGACATCATGAAGAACAAGGACATCATGGAGTTCGACC
GCATCACACACACCCGCTACGAGTACTCCACGCCCACCTGGACGACCTATTTGGGTGACGACCCCAACAACAAGTGG---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------------
>chr3B_256
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TAACATTGTTCTGGTTTTCTAAAGTTTGATTAATGATGACAATGATTTTTC-AAAAAACGAAGAG
GACATAAGAGGGGAGTAATT----TGGATACGAATTTGTGTGGTTC--------GCTCCATTTGATTC------------
-------------------CATCATGTGTGGAACACTACAAAATTAGTACAC---------------------------A
AGTATGAACAACCTCAATAAC-------------TAATTAATTCATAATAGCTGAATGCCAGTCGACTG-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GATTACGAGGGAATGAAGGGGAAGG
AAGGCTGAAAAAATCGACTGTCCCAATTATTTTTCTTCAGGCAACTGACATATAG---CGCCAAAATTAATTAAGCGAGA
TCTGGAAGGTGCCATGGATCTATAAATCCGGCAGGCATCCGAGCAAAGGAGAGCACCAAAACACAAACACAAACACAAAT
CCCAAGAAGTATTCATCATGAGAGACCACAAACACAAAAACAAACACAAGCACAAGCACACAACCCACCGGCGTGAAGGT
GAGGAGCAAGGAGCAGCTCCGGGCACAATGGCGGAGAGCCGCAGCACCATCGCCTTCTTCGGGACCTCCAGGCCACCGGT
GGCGCTGGACCTCTTCTCGTGCCCAGCGAACCCGCCGCCATCGTCTCCGCGGGACGAGCAGCGCCTCACCGACGGCGTCT
CGTACAACCACAACGGCCGGGCCATCCCGGCGGCGGCGCTCAAGGAGCTCCTGGCCTTCCTGGCCGAGAAGAAGGACCCC
GCGCTGGCCCTGGCCGGCGGTGCCACTCCGGAGGAGGTGGACAAGGGCGGTGTCACCGGCCTCGTCTTCGTCTCCGGGAG
GGACAACGGCCTGGAGACACTCCATGTGGCCCTGCGCACCACAGGCGACAA---GACCACCGTGCTGTCGCTGGCCGACA
TCTACGGTGCCGACACCTTCGGCGGGATCCGAATGGAGGACAGCGGCTGCTTGGCCGGCGGCTTCGAGGCGGGCGGCCTC
ACCGTCGGGCACTCGCTGGTGTACGTGTCCACCAAGGGGCCGGCGGCGGCACGGCGCACTCCGTGTCCGTGGACCGTGGT
GTACAAGACCAACCTTGCCGACGGCACCACGGAGCGCCTCACTCCGCCGGGTAACCATCAGATCTGATCTGCT---CTCT
CATATCGTATTCGTATATCACTCCGACGG---------------------------------CAGCACGCGGCTGATGCT
TCTTCGCGCGTGCAGACCAATACGACTTGAACCCGGCCGTGTCGCCGTCCGGGCAGAGGGTGGCGGTGGCCAACTTCCGG
T------------CCGGCGAGATCGGCCGCCTCAAGACCGATATTGTGGTGATGAACGTGGACCGGGAGGCGCAGGGCGG
GCTTGGGCGCAGCATCCTCATCAAGGACGGCGGGTGGCCGACGTGGGGCAGCGATAACGTCATCTTCTTCCACCGAGGGG
TCGACACCAAGGACCCGGCCAG------------TACCGACTGGGGCGTGTACCGGTACGACCTCACCACCAAGGACA--
----------CCATCAAGGTGACCCCCGACGACATCCAGGCCATGACTCCGGCGGCCATCGACAAGACGACGGTGGCCGT
GGCCGTCACCCGGGAGACCTCCATGGACCGCACAAGG------------------AAGGAGCAGCACCGCCACATCGAGA
TCTTTGA------GGTCGGCAAGCCTGCCAG---CCCGGTGGTGATCACCCATGG------CACGACGCC------GTTG
GCAGACCACTACAGCCCATTCGTGCTCGATGGCGGCAGCCGCGTCGGTTTCCACCGCTGCAGAACCGACGACGACAAGGT
GAATACTACCGCTGATCCCAAGAAGAAGCTGAGTAGCCCGGCGGCGACGCACAAGGACGGCGGGC---------TGGCCG
GCGTGTTCCCAAGCATCAGCAATGACGGCTCCAAGATCTGCTACGTGGACAACGAGTTCAGAT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CCGTGTGGGTCGCCGACGA---AAAG---GGCCCGCGACCAGTCCATTCGGTACGTCGTCAAATCTA
CTTATATATTCTCTTGTCTTCTTGTTGGTTCATCCATGAAA----TA--------------------TAACTATC-----
-----------TACAACG--------------------------------------------------------------
------TGAGCAGGTGAGGAACAAGATCAGAGTCTTGTCCACTACGTGGAACCAAGACATGAGC----------------
--AAGGACAC------------------CATCTACTTCTGCGAGGGCACGGCCGACCACCTG---------CAGATCTGT
GCCCTCGAAGGCGCCTCCGAGCTCCGGCCCAATGACCGGAACATGAGGCGCCTCACCAAGGGCAAATTCAACGACGCCTT
CCCCTCGAGCAACCCGGCCGGGACCAAGTTTGTGTTCCGGTCGACGCGCAACAGATCCGGTAGGCCGGAGGACGCCAAGT
ACAACAACCTCTACATCATGGAGGACGCGGAGGAAGGGGAGTGGGGTGAAGGCACG------------GTGACGCAGCTC
ACCGACGGGCCTTGGACTGACAGCCACTGCAGCTGGTCGCCCAGGGGTGACTGGATCGTCTTCTCCTCCTCCCGCGAT--
-------------------AGGGACATCCTCGACTCCGCCGG---TTGCTTCTCCATCTTCCTCGTCCTAGCCACCGACC
GCAAGGTGCTGGTGCGGGTCATG------------TCCCTGCCCGGCCACGTTTGCCACCCCATCTTCAGCCCGGACATG
GACAACCTCGTGGTCACCTCTGACGTCGCCGTAGTCTCCGCCGACCCGGTGTCTCTGCCAATCTTCATTGCCTCTGGCAG
GCCCTATGGTGACATGTTCTCCATCAAACTCCGTGACACAACGGACATCAACAAGAACAAGGACATCATGGAGTTCCACC
GCATCACACACACCCGCTACGAGTACTCCAAGCCCAGCTGGACCATCTATTTTGGTGACGACCCCAATGACAAGTGGCCA
ACCAATAGCAGTGTGGCTACGCCCCCCTGCGCACCGCCTCTTTCAATGCATTGGTGCTTAGGTGAGGTGCTAGGTGCACT
AAAAGTCTTAGCAACCAATCTCCCGAATGCATAGGTGCTTAGCTTTTGCAGCTAAGCTGCTTTCATTTTGTTTAGCAACT
AAACTCTTTATCCATTGGTTGATAGGCATTTTACGTAGGTCCACATGCTTGACATTGTTTCTTCTTCAGATCACCAAAGT
GCTCTCATCGC-------------------------------------------TTCTTAGCACCTATACATGGTGAAGC
ACTGAGAAGGGCACTCTCCATGTTACCCCTATACAGGAGTACTACCAGTGTTGTCCTTTTCTGTTTTCCATAAATAAAGG
GGTGTTATTTCAATATATTTTTTAATGAAGGGTTTTAATTCAGTGTTGACCAACTACAAACATAAATGAGTCATACCTGT
TAGGAAACCGACTCCACCTATC--GGAGGTACAGCCGGCTCTACATGATGTTTCATATCTAGATCGAACACTTTAGTCTA
ACATAA-AAGGTACGCAATTGCCTTAACCTCAAGAAAATCATCTCTATATGCACATACACTCACCTCTATGAACTGCTAA
AAAAGAGAGAGAATATCATCTCTATAAATAGAGCACCACCCTAGATGCATACGTATATCATATATCTTATCTCCTTTACT
TCTGTGCATTTTA---------------TGGCAGCACGACTTCCTGCCGGTTACTTAACAATACAAAACTAGTCTACCCG
-AAACTGGAAATTTTCAGAAAAAACTATATACTAGCT------AGGGTGTCCTACACCAT-GCATACGCCAGTAGGAGGT
GGTATATAAATTGAATGTAAA--------GTGTAGCAGGCTCCCCTTGTCTGCCCTCGCTCCGTCTCCAAGGGGCGACTC
GGGTGGATCCCAGTCTTGCCAA----------------------------------------------------------
-------------------------------------------------------------------------------
>chr7A_1792
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-----------------CAGTACGACGTGAGCCCCGCCGTGTCGCCGTCGGGCAAGATGGTGGCGGTGGCCAACTTCCGC
GGAAACAAGTGGACCGGCGAGATCGAGCGCCTCAACACCGACATCGCCGTCATGAACGTGGACAAGACGGCGCAGGGCGG
CCTGCGCCGCAGGATCCTCATCCGGGACGGCGGCTGGCCGACGTGGGGCAGCGACAACGTCATCTTCTTCCACCGCGGGA
CTGGGGAGTCCCCGACGA---------------------ACTGGGCCGTGTTCCGCTACGACATCGCCACCAAGGAGA--
----------CCGTGCGGGTGACGCCCGAGGCCATCGACGCCATGACTCCCGCGGCCATCAGCGAGACCAGGGTGGCCGT
GGCCGCCATCCGCCAGAAGTCTAGGCAGGCCGCCATGACCACGCCGCGAGAGG---AGGCGCAGTACCGCCACATCGAGA
TCTTCGA------CGTCGCGTCGCCGGACCGGCCGGCCGTGCAGATCAGCCAGAA------AATCAGGCC------CAAG
GGCGACCACTACAACCCTTTCGTGGCCGACGGCGGCAGCCGCATCGGCTACCATCGGGTCAGAACCGACGAT--------
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-------------------------------------------------------------------------------
>chr4A_1795
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--------------------TACGACGTCAGCCCGGCCGTGTCGCCCTCCGGCAAGATGGTGGCCGTGGCCAACTTCCGC
GGGAACAAGTGGACGGGCGAGATCGAGCGCCTCAACACCGACATCGCCGTCATGAACGTGGACAGGACGGCGCAGGGCGG
CCTGCGCCGCAGGATCCTCATCCGGGACGGCGGGTGGCCGACGTGGGGCAGCGACAACGTCATCTTCTTCCACCGAGGGA
CCGGCGAGTCCCCGACGA---------------------ACTGGGCCGTGTTCCGCTACGACATGGCCACCAAGGAGA--
----------CCGTCCGGGTGACGCCCGAGGCCATCGACGCCATGACCCCCGCGGCCATCAGCGAGACCAGGGTCGCCGT
GGCCGCCATCCGCCAGAAGTCTAGGCAGGCCGCCATGACCACGCCGCGAGAGG---AGGCGCAGTACCGCCACATCGAGA
TCTTCGA------CGTCGCGTCGCCGGACCGCCCCGCCGTGCAGATCAGCCAGAA------GATCAGGCC------GAAA
GGCGACCACTACAACCCTTTCGTGGCCGACGGCGGCAGCCGCATCGGCTACCATCGGGTCAGAACCGACGAT--------
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-------------------------------------------------------------------------------
>SNPs
SSSSSS----------S-----SSS----------S--SS----S-----------------------------------
-------S------------S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
-S--------------------------------------------------------------S-S-------------
-------------S--------------S-------------S-----------------------SS------------
-----------------------------S--------S--S----S-----SSSSSSSSSSSSSSSSSSSS--------
---SSS-S--SSSSSSS-S-S-S-S---S-S----------------------S----SS--S-SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SS--S--S-S---S-SS----
------S-------S-----S-------SS-------------------------SSS----SS----------------
---S-----S-------------------S----S----------------------S----------S----------S
------------S-------------------S-----------------------------------------------
--S----------S---S--------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S-----S---S--------------------S-----------------------S--
--------------------SS------------------------------------S----------S----------
--------------------------------------------S------SSS--S----------------------S
------------S------------------------------S------S-----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SSSSSSSS-SSSSSSSSS--------------------SSSSSS------------------
---S----------------------------------------------------------------------------
---------------------S----------S-----------------------------------------------
--------------------------------------------------------------------------------
-------------S--------------------------------------------------------------S---
-----------------------------SS-------------------------------------------------
----------------------S---------------------------------------------------------
-----------------------------------------------------S--------------------------
--S-----------------------------------------S-----------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------S-----------------------------------S-S----S-------SS-------------
------------------------SS---SSS------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S---------------------------------------------------------------S---S-----
----------------------------S-----------------S---------------------------------
--------------------------S---------------------------S----------------S--S-----
---------------------S------S---------S-SSSSS-----------------------------------
-------------------------------------------S------------------------------------
------------------------S----S-----------------------------------------------S--
------------------------S---------------S-S------------------------S------------
--------------S-------------------S--S-----------------------S------------------
---------S---S-------SS-----S-------------------------------------------S-------
-S-------------S--------S----------------S------S--------------------S----------
---S----------------------------------------------S----------------S------------
------S-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------S-----------S----
-----------------------------------------------S--S-----------------S-----------
-----S----S--------------S-S--------------------------S-------------------------
-------SS------------SSS------S--------------S-S------S-------------------------
-S----S--------------S-------S-------------------S------------S---S------SS-S---
----------SS--------------------------------S---S------------S---------S--------
-S----------SSSSSSSSSSSSSSSS------------S---SS---------S-------SS--------S---SSS
S--------SS----S------S---SS-SSS--SSSSSSSSS----------------SS------S---S---S----
---------------------SSSSSSSS--S----------------S--------S--S---SS--------------
S--S------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_943
--------------------------------------------------------------------------------
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-------------------------------------------ACTGACATATAGCCACGCCC-----------------
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-------------------------------------------------------------------------------
>reverse_1819
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----------------------------------------------------------CATTCAGCACGCGACTGATG--
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_1138
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------------------------------------------------------------------------------GT
GAAGAGCAAGGAGGAGCC--------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_2403
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--TGACCACTACAACCCGTTCG----------------------------------------------------------
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-------------------------------------------------------------------------------
>forward_2157
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------ACGACCTCACCACCAAGGAA---
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
>reverse_4236
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------AAAGC
ACTGAGAAGGGCACT-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------
