Multiple sequence alignment - TraesCS3D01G429300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G429300 chr3D 100.000 1783 0 0 1 1783 543936380 543934598 0.000000e+00 3293.0
1 TraesCS3D01G429300 chr3D 87.547 1060 73 33 719 1767 543970776 543969765 0.000000e+00 1171.0
2 TraesCS3D01G429300 chr3D 100.000 158 0 0 2395 2552 543933986 543933829 2.480000e-75 292.0
3 TraesCS3D01G429300 chr3D 82.492 297 20 13 432 707 543971333 543971048 5.490000e-57 231.0
4 TraesCS3D01G429300 chr3D 100.000 28 0 0 746 773 361776987 361776960 5.000000e-03 52.8
5 TraesCS3D01G429300 chr3B 89.943 1402 71 32 433 1778 719828843 719827456 0.000000e+00 1744.0
6 TraesCS3D01G429300 chr3B 85.666 1179 81 41 432 1567 719880564 719879431 0.000000e+00 1160.0
7 TraesCS3D01G429300 chr3B 88.952 525 27 13 1245 1767 719879415 719878920 1.000000e-173 619.0
8 TraesCS3D01G429300 chr3B 89.614 414 16 3 1136 1549 790491938 790491552 3.790000e-138 501.0
9 TraesCS3D01G429300 chr3B 100.000 28 0 0 746 773 471485601 471485574 5.000000e-03 52.8
10 TraesCS3D01G429300 chr3A 87.758 1405 96 46 433 1783 680971516 680970134 0.000000e+00 1572.0
11 TraesCS3D01G429300 chr3A 92.274 906 51 8 787 1680 681050810 681049912 0.000000e+00 1267.0
12 TraesCS3D01G429300 chr3A 87.986 849 53 18 971 1783 680765119 680764284 0.000000e+00 957.0
13 TraesCS3D01G429300 chr3A 88.341 223 18 4 309 530 681104467 681104252 7.000000e-66 261.0
14 TraesCS3D01G429300 chr3A 86.900 229 15 6 433 651 681051200 681050977 2.540000e-60 243.0
15 TraesCS3D01G429300 chr3A 85.106 235 20 8 664 897 681068269 681068049 2.550000e-55 226.0
16 TraesCS3D01G429300 chr3A 89.024 164 17 1 731 893 681085388 681085225 4.310000e-48 202.0
17 TraesCS3D01G429300 chr3A 86.667 150 10 4 179 318 681104641 681104492 9.450000e-35 158.0
18 TraesCS3D01G429300 chr3A 91.429 105 5 2 539 643 680765690 680765590 9.520000e-30 141.0
19 TraesCS3D01G429300 chr3A 95.312 64 2 1 525 588 681104018 681103956 1.620000e-17 100.0
20 TraesCS3D01G429300 chr3A 90.541 74 6 1 1706 1778 681049912 681049839 2.090000e-16 97.1
21 TraesCS3D01G429300 chr3A 95.745 47 2 0 606 652 681099034 681098988 2.720000e-10 76.8
22 TraesCS3D01G429300 chr7B 87.773 458 25 4 1136 1592 646488068 646488495 8.150000e-140 507.0
23 TraesCS3D01G429300 chr7D 74.866 374 55 18 68 419 607956544 607956188 1.590000e-27 134.0
24 TraesCS3D01G429300 chr7D 83.562 73 11 1 2478 2550 220513152 220513223 1.640000e-07 67.6
25 TraesCS3D01G429300 chr7A 100.000 31 0 0 2478 2508 59400133 59400103 9.860000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G429300 chr3D 543933829 543936380 2551 True 1792.5 3293 100.0000 1 2552 2 chr3D.!!$R2 2551
1 TraesCS3D01G429300 chr3D 543969765 543971333 1568 True 701.0 1171 85.0195 432 1767 2 chr3D.!!$R3 1335
2 TraesCS3D01G429300 chr3B 719827456 719828843 1387 True 1744.0 1744 89.9430 433 1778 1 chr3B.!!$R2 1345
3 TraesCS3D01G429300 chr3B 719878920 719880564 1644 True 889.5 1160 87.3090 432 1767 2 chr3B.!!$R4 1335
4 TraesCS3D01G429300 chr3A 680970134 680971516 1382 True 1572.0 1572 87.7580 433 1783 1 chr3A.!!$R1 1350
5 TraesCS3D01G429300 chr3A 680764284 680765690 1406 True 549.0 957 89.7075 539 1783 2 chr3A.!!$R5 1244
6 TraesCS3D01G429300 chr3A 681049839 681051200 1361 True 535.7 1267 89.9050 433 1778 3 chr3A.!!$R6 1345

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
125 126 0.396556 AAAACCGGGAACACTGCCTT 60.397 50.0 6.32 0.0 0.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1583 2139 0.321346 TCTCGGTTCTGCATGCAAGA 59.679 50.0 22.88 17.03 0.0 3.02 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.035843 CTCCTAGTTGGGAGGCGT 57.964 61.111 3.75 0.00 46.63 5.68
22 23 3.202548 CTCCTAGTTGGGAGGCGTA 57.797 57.895 3.75 0.00 46.63 4.42
23 24 1.481871 CTCCTAGTTGGGAGGCGTAA 58.518 55.000 3.75 0.00 46.63 3.18
24 25 1.409427 CTCCTAGTTGGGAGGCGTAAG 59.591 57.143 3.75 0.00 46.63 2.34
25 26 0.464452 CCTAGTTGGGAGGCGTAAGG 59.536 60.000 0.00 0.00 38.28 2.69
26 27 1.481871 CTAGTTGGGAGGCGTAAGGA 58.518 55.000 0.00 0.00 38.28 3.36
27 28 1.829222 CTAGTTGGGAGGCGTAAGGAA 59.171 52.381 0.00 0.00 38.28 3.36
28 29 1.061546 AGTTGGGAGGCGTAAGGAAA 58.938 50.000 0.00 0.00 38.28 3.13
29 30 1.422402 AGTTGGGAGGCGTAAGGAAAA 59.578 47.619 0.00 0.00 38.28 2.29
30 31 2.158579 AGTTGGGAGGCGTAAGGAAAAA 60.159 45.455 0.00 0.00 38.28 1.94
53 54 5.819825 AAAAGTGTAGCTATAGCAAAGCC 57.180 39.130 26.07 9.90 45.16 4.35
54 55 4.762289 AAGTGTAGCTATAGCAAAGCCT 57.238 40.909 26.07 11.88 45.16 4.58
55 56 5.871396 AAGTGTAGCTATAGCAAAGCCTA 57.129 39.130 26.07 6.28 45.16 3.93
56 57 5.461032 AGTGTAGCTATAGCAAAGCCTAG 57.539 43.478 26.07 0.00 45.16 3.02
57 58 4.896482 AGTGTAGCTATAGCAAAGCCTAGT 59.104 41.667 26.07 5.10 45.16 2.57
58 59 4.985409 GTGTAGCTATAGCAAAGCCTAGTG 59.015 45.833 26.07 0.00 45.16 2.74
59 60 4.893524 TGTAGCTATAGCAAAGCCTAGTGA 59.106 41.667 26.07 0.00 45.16 3.41
60 61 5.540337 TGTAGCTATAGCAAAGCCTAGTGAT 59.460 40.000 26.07 3.66 45.16 3.06
61 62 4.892433 AGCTATAGCAAAGCCTAGTGATG 58.108 43.478 26.07 0.00 45.16 3.07
62 63 3.434984 GCTATAGCAAAGCCTAGTGATGC 59.565 47.826 20.01 0.00 41.59 3.91
63 64 3.565764 ATAGCAAAGCCTAGTGATGCA 57.434 42.857 0.00 0.00 39.42 3.96
64 65 1.747709 AGCAAAGCCTAGTGATGCAG 58.252 50.000 0.00 0.00 39.42 4.41
65 66 1.280133 AGCAAAGCCTAGTGATGCAGA 59.720 47.619 0.00 0.00 39.42 4.26
66 67 2.092538 AGCAAAGCCTAGTGATGCAGAT 60.093 45.455 0.00 0.00 39.42 2.90
67 68 3.135348 AGCAAAGCCTAGTGATGCAGATA 59.865 43.478 0.00 0.00 39.42 1.98
68 69 4.070716 GCAAAGCCTAGTGATGCAGATAT 58.929 43.478 0.00 0.00 37.00 1.63
69 70 5.012458 AGCAAAGCCTAGTGATGCAGATATA 59.988 40.000 0.00 0.00 39.42 0.86
70 71 5.350914 GCAAAGCCTAGTGATGCAGATATAG 59.649 44.000 0.00 0.00 37.00 1.31
71 72 6.462500 CAAAGCCTAGTGATGCAGATATAGT 58.538 40.000 0.00 0.00 0.00 2.12
72 73 6.678568 AAGCCTAGTGATGCAGATATAGTT 57.321 37.500 0.00 0.00 0.00 2.24
73 74 6.035368 AGCCTAGTGATGCAGATATAGTTG 57.965 41.667 0.00 0.00 0.00 3.16
74 75 5.541868 AGCCTAGTGATGCAGATATAGTTGT 59.458 40.000 0.00 0.00 0.00 3.32
75 76 6.721668 AGCCTAGTGATGCAGATATAGTTGTA 59.278 38.462 0.00 0.00 0.00 2.41
76 77 7.233553 AGCCTAGTGATGCAGATATAGTTGTAA 59.766 37.037 0.00 0.00 0.00 2.41
77 78 7.872993 GCCTAGTGATGCAGATATAGTTGTAAA 59.127 37.037 0.00 0.00 0.00 2.01
78 79 9.764363 CCTAGTGATGCAGATATAGTTGTAAAA 57.236 33.333 0.00 0.00 0.00 1.52
81 82 8.893727 AGTGATGCAGATATAGTTGTAAAAACC 58.106 33.333 0.00 0.00 0.00 3.27
82 83 7.850982 GTGATGCAGATATAGTTGTAAAAACCG 59.149 37.037 0.00 0.00 0.00 4.44
83 84 6.671614 TGCAGATATAGTTGTAAAAACCGG 57.328 37.500 0.00 0.00 0.00 5.28
84 85 6.408035 TGCAGATATAGTTGTAAAAACCGGA 58.592 36.000 9.46 0.00 0.00 5.14
85 86 6.314400 TGCAGATATAGTTGTAAAAACCGGAC 59.686 38.462 9.46 0.00 0.00 4.79
86 87 6.238293 GCAGATATAGTTGTAAAAACCGGACC 60.238 42.308 9.46 0.00 0.00 4.46
87 88 6.019318 CAGATATAGTTGTAAAAACCGGACCG 60.019 42.308 9.46 6.99 0.00 4.79
114 115 2.745037 TCCGACTGGAAAACCGGG 59.255 61.111 6.32 0.00 42.85 5.73
115 116 1.837947 TCCGACTGGAAAACCGGGA 60.838 57.895 6.32 0.00 42.85 5.14
116 117 1.071814 CCGACTGGAAAACCGGGAA 59.928 57.895 6.32 0.00 38.42 3.97
117 118 1.232621 CCGACTGGAAAACCGGGAAC 61.233 60.000 6.32 0.00 38.42 3.62
118 119 0.533308 CGACTGGAAAACCGGGAACA 60.533 55.000 6.32 0.00 0.00 3.18
119 120 0.949397 GACTGGAAAACCGGGAACAC 59.051 55.000 6.32 0.00 0.00 3.32
120 121 0.549469 ACTGGAAAACCGGGAACACT 59.451 50.000 6.32 0.00 0.00 3.55
121 122 0.951558 CTGGAAAACCGGGAACACTG 59.048 55.000 6.32 0.00 0.00 3.66
122 123 1.104577 TGGAAAACCGGGAACACTGC 61.105 55.000 6.32 0.00 0.00 4.40
123 124 1.658114 GAAAACCGGGAACACTGCC 59.342 57.895 6.32 0.00 0.00 4.85
124 125 0.822121 GAAAACCGGGAACACTGCCT 60.822 55.000 6.32 0.00 0.00 4.75
125 126 0.396556 AAAACCGGGAACACTGCCTT 60.397 50.000 6.32 0.00 0.00 4.35
126 127 1.106944 AAACCGGGAACACTGCCTTG 61.107 55.000 6.32 0.00 0.00 3.61
127 128 3.365265 CCGGGAACACTGCCTTGC 61.365 66.667 0.00 0.00 0.00 4.01
128 129 3.365265 CGGGAACACTGCCTTGCC 61.365 66.667 0.00 0.00 0.00 4.52
129 130 2.991540 GGGAACACTGCCTTGCCC 60.992 66.667 0.00 0.00 0.00 5.36
130 131 2.991540 GGAACACTGCCTTGCCCC 60.992 66.667 0.00 0.00 0.00 5.80
131 132 2.116125 GAACACTGCCTTGCCCCT 59.884 61.111 0.00 0.00 0.00 4.79
132 133 1.531602 GAACACTGCCTTGCCCCTT 60.532 57.895 0.00 0.00 0.00 3.95
133 134 1.075301 AACACTGCCTTGCCCCTTT 60.075 52.632 0.00 0.00 0.00 3.11
134 135 0.690744 AACACTGCCTTGCCCCTTTT 60.691 50.000 0.00 0.00 0.00 2.27
135 136 0.690744 ACACTGCCTTGCCCCTTTTT 60.691 50.000 0.00 0.00 0.00 1.94
136 137 1.337118 CACTGCCTTGCCCCTTTTTA 58.663 50.000 0.00 0.00 0.00 1.52
137 138 1.691434 CACTGCCTTGCCCCTTTTTAA 59.309 47.619 0.00 0.00 0.00 1.52
138 139 2.103941 CACTGCCTTGCCCCTTTTTAAA 59.896 45.455 0.00 0.00 0.00 1.52
139 140 2.774809 ACTGCCTTGCCCCTTTTTAAAA 59.225 40.909 0.00 0.00 0.00 1.52
140 141 3.181455 ACTGCCTTGCCCCTTTTTAAAAG 60.181 43.478 10.23 10.23 0.00 2.27
141 142 2.774809 TGCCTTGCCCCTTTTTAAAAGT 59.225 40.909 15.19 0.00 0.00 2.66
142 143 3.138304 GCCTTGCCCCTTTTTAAAAGTG 58.862 45.455 15.19 4.95 0.00 3.16
143 144 3.433031 GCCTTGCCCCTTTTTAAAAGTGT 60.433 43.478 15.19 0.00 0.00 3.55
144 145 4.126437 CCTTGCCCCTTTTTAAAAGTGTG 58.874 43.478 15.19 5.49 0.00 3.82
145 146 4.383661 CCTTGCCCCTTTTTAAAAGTGTGT 60.384 41.667 15.19 0.00 0.00 3.72
146 147 4.394439 TGCCCCTTTTTAAAAGTGTGTC 57.606 40.909 15.19 2.33 0.00 3.67
147 148 3.181485 TGCCCCTTTTTAAAAGTGTGTCG 60.181 43.478 15.19 0.47 0.00 4.35
148 149 3.797524 GCCCCTTTTTAAAAGTGTGTCGG 60.798 47.826 15.19 8.46 0.00 4.79
149 150 3.382227 CCCCTTTTTAAAAGTGTGTCGGT 59.618 43.478 15.19 0.00 0.00 4.69
150 151 4.498513 CCCCTTTTTAAAAGTGTGTCGGTC 60.499 45.833 15.19 0.00 0.00 4.79
151 152 4.337274 CCCTTTTTAAAAGTGTGTCGGTCT 59.663 41.667 15.19 0.00 0.00 3.85
152 153 5.163591 CCCTTTTTAAAAGTGTGTCGGTCTT 60.164 40.000 15.19 0.00 0.00 3.01
153 154 6.327154 CCTTTTTAAAAGTGTGTCGGTCTTT 58.673 36.000 15.19 0.00 33.61 2.52
154 155 6.809689 CCTTTTTAAAAGTGTGTCGGTCTTTT 59.190 34.615 15.19 0.00 41.89 2.27
155 156 7.969508 CCTTTTTAAAAGTGTGTCGGTCTTTTA 59.030 33.333 15.19 0.00 40.38 1.52
156 157 8.898983 TTTTTAAAAGTGTGTCGGTCTTTTAG 57.101 30.769 0.14 0.00 41.42 1.85
157 158 7.614124 TTTAAAAGTGTGTCGGTCTTTTAGT 57.386 32.000 0.00 0.00 41.42 2.24
158 159 8.715191 TTTAAAAGTGTGTCGGTCTTTTAGTA 57.285 30.769 0.00 0.00 41.42 1.82
159 160 8.715191 TTAAAAGTGTGTCGGTCTTTTAGTAA 57.285 30.769 0.00 0.00 41.42 2.24
160 161 6.839820 AAAGTGTGTCGGTCTTTTAGTAAG 57.160 37.500 0.00 0.00 0.00 2.34
161 162 5.779529 AGTGTGTCGGTCTTTTAGTAAGA 57.220 39.130 0.00 0.00 0.00 2.10
162 163 6.152932 AGTGTGTCGGTCTTTTAGTAAGAA 57.847 37.500 0.00 0.00 0.00 2.52
163 164 6.576185 AGTGTGTCGGTCTTTTAGTAAGAAA 58.424 36.000 0.00 0.00 0.00 2.52
164 165 7.043565 AGTGTGTCGGTCTTTTAGTAAGAAAA 58.956 34.615 0.00 0.00 0.00 2.29
165 166 7.550196 AGTGTGTCGGTCTTTTAGTAAGAAAAA 59.450 33.333 0.00 0.00 0.00 1.94
166 167 7.637519 GTGTGTCGGTCTTTTAGTAAGAAAAAC 59.362 37.037 0.00 0.00 0.00 2.43
167 168 7.333921 TGTGTCGGTCTTTTAGTAAGAAAAACA 59.666 33.333 0.00 0.00 0.00 2.83
168 169 8.340443 GTGTCGGTCTTTTAGTAAGAAAAACAT 58.660 33.333 0.00 0.00 0.00 2.71
169 170 9.545105 TGTCGGTCTTTTAGTAAGAAAAACATA 57.455 29.630 0.00 0.00 0.00 2.29
195 196 7.846644 AAAAGTTGCATCAACAAGAAATTGA 57.153 28.000 11.63 0.00 45.66 2.57
196 197 7.846644 AAAGTTGCATCAACAAGAAATTGAA 57.153 28.000 11.63 0.00 45.66 2.69
197 198 6.833342 AGTTGCATCAACAAGAAATTGAAC 57.167 33.333 11.63 0.00 45.66 3.18
198 199 6.339730 AGTTGCATCAACAAGAAATTGAACA 58.660 32.000 11.63 0.00 45.66 3.18
199 200 6.817641 AGTTGCATCAACAAGAAATTGAACAA 59.182 30.769 11.63 0.00 45.66 2.83
200 201 6.586868 TGCATCAACAAGAAATTGAACAAC 57.413 33.333 0.00 0.00 39.43 3.32
201 202 6.339730 TGCATCAACAAGAAATTGAACAACT 58.660 32.000 0.00 0.00 39.43 3.16
202 203 7.487484 TGCATCAACAAGAAATTGAACAACTA 58.513 30.769 0.00 0.00 39.43 2.24
203 204 7.978414 TGCATCAACAAGAAATTGAACAACTAA 59.022 29.630 0.00 0.00 39.43 2.24
204 205 8.268738 GCATCAACAAGAAATTGAACAACTAAC 58.731 33.333 0.00 0.00 39.43 2.34
205 206 8.755018 CATCAACAAGAAATTGAACAACTAACC 58.245 33.333 0.00 0.00 39.43 2.85
206 207 8.062065 TCAACAAGAAATTGAACAACTAACCT 57.938 30.769 0.00 0.00 33.16 3.50
207 208 8.527810 TCAACAAGAAATTGAACAACTAACCTT 58.472 29.630 0.00 0.00 33.16 3.50
208 209 8.594687 CAACAAGAAATTGAACAACTAACCTTG 58.405 33.333 0.00 0.00 34.98 3.61
209 210 8.062065 ACAAGAAATTGAACAACTAACCTTGA 57.938 30.769 0.00 0.00 33.59 3.02
210 211 8.190784 ACAAGAAATTGAACAACTAACCTTGAG 58.809 33.333 0.00 0.00 33.59 3.02
211 212 7.277174 AGAAATTGAACAACTAACCTTGAGG 57.723 36.000 0.00 0.00 42.17 3.86
212 213 5.453567 AATTGAACAACTAACCTTGAGGC 57.546 39.130 0.00 0.00 39.32 4.70
213 214 3.569194 TGAACAACTAACCTTGAGGCA 57.431 42.857 0.00 0.00 39.32 4.75
214 215 3.892284 TGAACAACTAACCTTGAGGCAA 58.108 40.909 0.00 0.00 39.32 4.52
215 216 3.882888 TGAACAACTAACCTTGAGGCAAG 59.117 43.478 0.00 0.00 40.75 4.01
223 224 2.951269 CTTGAGGCAAGGCATGTGA 58.049 52.632 0.00 0.00 37.77 3.58
224 225 1.471119 CTTGAGGCAAGGCATGTGAT 58.529 50.000 0.00 0.00 37.77 3.06
225 226 2.646930 CTTGAGGCAAGGCATGTGATA 58.353 47.619 0.00 0.00 37.77 2.15
226 227 2.804986 TGAGGCAAGGCATGTGATAA 57.195 45.000 0.00 0.00 0.00 1.75
227 228 2.368439 TGAGGCAAGGCATGTGATAAC 58.632 47.619 0.00 0.00 0.00 1.89
228 229 1.678101 GAGGCAAGGCATGTGATAACC 59.322 52.381 0.00 0.00 0.00 2.85
229 230 1.005805 AGGCAAGGCATGTGATAACCA 59.994 47.619 0.00 0.00 0.00 3.67
230 231 1.824230 GGCAAGGCATGTGATAACCAA 59.176 47.619 0.00 0.00 0.00 3.67
231 232 2.417243 GGCAAGGCATGTGATAACCAAC 60.417 50.000 0.00 0.00 0.00 3.77
232 233 2.493278 GCAAGGCATGTGATAACCAACT 59.507 45.455 0.00 0.00 0.00 3.16
233 234 3.694072 GCAAGGCATGTGATAACCAACTA 59.306 43.478 0.00 0.00 0.00 2.24
234 235 4.201950 GCAAGGCATGTGATAACCAACTAG 60.202 45.833 0.00 0.00 0.00 2.57
235 236 5.185454 CAAGGCATGTGATAACCAACTAGA 58.815 41.667 0.00 0.00 0.00 2.43
236 237 4.770795 AGGCATGTGATAACCAACTAGAC 58.229 43.478 0.00 0.00 0.00 2.59
237 238 4.471386 AGGCATGTGATAACCAACTAGACT 59.529 41.667 0.00 0.00 0.00 3.24
238 239 5.661312 AGGCATGTGATAACCAACTAGACTA 59.339 40.000 0.00 0.00 0.00 2.59
239 240 6.156256 AGGCATGTGATAACCAACTAGACTAA 59.844 38.462 0.00 0.00 0.00 2.24
240 241 6.992715 GGCATGTGATAACCAACTAGACTAAT 59.007 38.462 0.00 0.00 0.00 1.73
241 242 8.148351 GGCATGTGATAACCAACTAGACTAATA 58.852 37.037 0.00 0.00 0.00 0.98
242 243 9.542462 GCATGTGATAACCAACTAGACTAATAA 57.458 33.333 0.00 0.00 0.00 1.40
245 246 9.865321 TGTGATAACCAACTAGACTAATAACAC 57.135 33.333 0.00 0.00 0.00 3.32
251 252 8.603242 ACCAACTAGACTAATAACACTTTGTG 57.397 34.615 0.00 0.00 39.75 3.33
252 253 8.426489 ACCAACTAGACTAATAACACTTTGTGA 58.574 33.333 0.00 0.00 36.96 3.58
253 254 9.436957 CCAACTAGACTAATAACACTTTGTGAT 57.563 33.333 0.00 0.00 36.96 3.06
267 268 8.874745 ACACTTTGTGATTTATTAATCGTTCG 57.125 30.769 4.61 0.00 42.55 3.95
268 269 7.480542 ACACTTTGTGATTTATTAATCGTTCGC 59.519 33.333 4.61 0.00 42.55 4.70
269 270 7.480229 CACTTTGTGATTTATTAATCGTTCGCA 59.520 33.333 0.00 0.00 42.55 5.10
270 271 8.181573 ACTTTGTGATTTATTAATCGTTCGCAT 58.818 29.630 0.00 0.00 42.55 4.73
271 272 8.541733 TTTGTGATTTATTAATCGTTCGCATC 57.458 30.769 0.00 0.00 42.55 3.91
272 273 6.655062 TGTGATTTATTAATCGTTCGCATCC 58.345 36.000 0.00 0.00 42.55 3.51
273 274 6.258947 TGTGATTTATTAATCGTTCGCATCCA 59.741 34.615 0.00 0.00 42.55 3.41
274 275 7.129622 GTGATTTATTAATCGTTCGCATCCAA 58.870 34.615 0.00 0.00 42.55 3.53
275 276 7.803189 GTGATTTATTAATCGTTCGCATCCAAT 59.197 33.333 0.00 0.00 42.55 3.16
276 277 8.994170 TGATTTATTAATCGTTCGCATCCAATA 58.006 29.630 0.00 0.00 42.55 1.90
277 278 9.262472 GATTTATTAATCGTTCGCATCCAATAC 57.738 33.333 0.00 0.00 31.53 1.89
278 279 7.956420 TTATTAATCGTTCGCATCCAATACT 57.044 32.000 0.00 0.00 0.00 2.12
279 280 9.478768 TTTATTAATCGTTCGCATCCAATACTA 57.521 29.630 0.00 0.00 0.00 1.82
280 281 6.758593 TTAATCGTTCGCATCCAATACTAC 57.241 37.500 0.00 0.00 0.00 2.73
281 282 2.723209 TCGTTCGCATCCAATACTACG 58.277 47.619 0.00 0.00 0.00 3.51
282 283 2.097954 TCGTTCGCATCCAATACTACGT 59.902 45.455 0.00 0.00 0.00 3.57
283 284 2.215587 CGTTCGCATCCAATACTACGTG 59.784 50.000 0.00 0.00 0.00 4.49
284 285 3.184541 GTTCGCATCCAATACTACGTGT 58.815 45.455 0.00 0.00 0.00 4.49
285 286 4.353737 GTTCGCATCCAATACTACGTGTA 58.646 43.478 0.00 0.00 35.37 2.90
286 287 4.841443 TCGCATCCAATACTACGTGTAT 57.159 40.909 0.00 1.40 43.19 2.29
288 289 5.217393 TCGCATCCAATACTACGTGTATTC 58.783 41.667 15.79 7.75 45.74 1.75
289 290 4.979815 CGCATCCAATACTACGTGTATTCA 59.020 41.667 15.79 9.34 45.74 2.57
290 291 5.633601 CGCATCCAATACTACGTGTATTCAT 59.366 40.000 15.79 10.62 45.74 2.57
291 292 6.145534 CGCATCCAATACTACGTGTATTCATT 59.854 38.462 15.79 5.78 45.74 2.57
292 293 7.327518 CGCATCCAATACTACGTGTATTCATTA 59.672 37.037 15.79 6.81 45.74 1.90
293 294 8.648097 GCATCCAATACTACGTGTATTCATTAG 58.352 37.037 15.79 8.29 45.74 1.73
294 295 9.908152 CATCCAATACTACGTGTATTCATTAGA 57.092 33.333 15.79 10.56 45.74 2.10
296 297 9.908152 TCCAATACTACGTGTATTCATTAGATG 57.092 33.333 15.79 7.37 45.74 2.90
297 298 9.692749 CCAATACTACGTGTATTCATTAGATGT 57.307 33.333 15.79 0.00 45.74 3.06
301 302 8.221965 ACTACGTGTATTCATTAGATGTGAGA 57.778 34.615 0.00 0.00 0.00 3.27
302 303 8.851145 ACTACGTGTATTCATTAGATGTGAGAT 58.149 33.333 0.00 0.00 0.00 2.75
303 304 9.335891 CTACGTGTATTCATTAGATGTGAGATC 57.664 37.037 0.00 0.00 0.00 2.75
304 305 7.716612 ACGTGTATTCATTAGATGTGAGATCA 58.283 34.615 0.00 0.00 0.00 2.92
305 306 8.197439 ACGTGTATTCATTAGATGTGAGATCAA 58.803 33.333 0.00 0.00 0.00 2.57
306 307 9.034544 CGTGTATTCATTAGATGTGAGATCAAA 57.965 33.333 0.00 0.00 0.00 2.69
337 338 9.487442 TGGAAAATAACCTTAAATATTCCAGCT 57.513 29.630 0.00 0.00 39.93 4.24
343 344 9.700831 ATAACCTTAAATATTCCAGCTTCTTGT 57.299 29.630 0.00 0.00 0.00 3.16
344 345 8.422577 AACCTTAAATATTCCAGCTTCTTGTT 57.577 30.769 0.00 0.00 0.00 2.83
345 346 7.830739 ACCTTAAATATTCCAGCTTCTTGTTG 58.169 34.615 0.00 0.00 0.00 3.33
346 347 6.753744 CCTTAAATATTCCAGCTTCTTGTTGC 59.246 38.462 0.00 0.00 0.00 4.17
347 348 5.726980 AAATATTCCAGCTTCTTGTTGCA 57.273 34.783 0.00 0.00 0.00 4.08
348 349 5.726980 AATATTCCAGCTTCTTGTTGCAA 57.273 34.783 0.00 0.00 0.00 4.08
349 350 5.726980 ATATTCCAGCTTCTTGTTGCAAA 57.273 34.783 0.00 0.00 0.00 3.68
350 351 4.612264 ATTCCAGCTTCTTGTTGCAAAT 57.388 36.364 0.00 0.00 0.00 2.32
351 352 3.374220 TCCAGCTTCTTGTTGCAAATG 57.626 42.857 0.00 0.00 0.00 2.32
352 353 2.957680 TCCAGCTTCTTGTTGCAAATGA 59.042 40.909 0.00 0.00 0.00 2.57
353 354 3.384146 TCCAGCTTCTTGTTGCAAATGAA 59.616 39.130 0.00 5.33 0.00 2.57
354 355 3.492011 CCAGCTTCTTGTTGCAAATGAAC 59.508 43.478 0.00 0.00 0.00 3.18
355 356 4.365723 CAGCTTCTTGTTGCAAATGAACT 58.634 39.130 0.00 4.20 0.00 3.01
356 357 4.208460 CAGCTTCTTGTTGCAAATGAACTG 59.792 41.667 0.00 11.42 0.00 3.16
357 358 4.098349 AGCTTCTTGTTGCAAATGAACTGA 59.902 37.500 0.00 0.00 0.00 3.41
358 359 4.986659 GCTTCTTGTTGCAAATGAACTGAT 59.013 37.500 0.00 0.00 0.00 2.90
359 360 6.016024 AGCTTCTTGTTGCAAATGAACTGATA 60.016 34.615 0.00 0.00 0.00 2.15
360 361 6.642131 GCTTCTTGTTGCAAATGAACTGATAA 59.358 34.615 0.00 0.00 0.00 1.75
361 362 7.169645 GCTTCTTGTTGCAAATGAACTGATAAA 59.830 33.333 0.00 0.00 0.00 1.40
362 363 7.928908 TCTTGTTGCAAATGAACTGATAAAC 57.071 32.000 0.00 0.00 0.00 2.01
363 364 7.487484 TCTTGTTGCAAATGAACTGATAAACA 58.513 30.769 0.00 0.00 0.00 2.83
364 365 8.143193 TCTTGTTGCAAATGAACTGATAAACAT 58.857 29.630 0.00 0.00 0.00 2.71
365 366 9.409312 CTTGTTGCAAATGAACTGATAAACATA 57.591 29.630 0.00 0.00 0.00 2.29
366 367 9.755804 TTGTTGCAAATGAACTGATAAACATAA 57.244 25.926 0.00 0.00 0.00 1.90
367 368 9.755804 TGTTGCAAATGAACTGATAAACATAAA 57.244 25.926 0.00 0.00 0.00 1.40
369 370 8.755696 TGCAAATGAACTGATAAACATAAACC 57.244 30.769 0.00 0.00 0.00 3.27
370 371 7.540400 TGCAAATGAACTGATAAACATAAACCG 59.460 33.333 0.00 0.00 0.00 4.44
371 372 7.009174 GCAAATGAACTGATAAACATAAACCGG 59.991 37.037 0.00 0.00 0.00 5.28
372 373 5.554822 TGAACTGATAAACATAAACCGGC 57.445 39.130 0.00 0.00 0.00 6.13
373 374 5.004448 TGAACTGATAAACATAAACCGGCA 58.996 37.500 0.00 0.00 0.00 5.69
374 375 5.123186 TGAACTGATAAACATAAACCGGCAG 59.877 40.000 0.00 0.00 0.00 4.85
375 376 4.585879 ACTGATAAACATAAACCGGCAGT 58.414 39.130 0.00 0.00 0.00 4.40
376 377 4.634443 ACTGATAAACATAAACCGGCAGTC 59.366 41.667 0.00 0.00 28.87 3.51
377 378 3.942748 TGATAAACATAAACCGGCAGTCC 59.057 43.478 0.00 0.00 0.00 3.85
388 389 3.618171 GGCAGTCCGACCAGTAAAA 57.382 52.632 0.00 0.00 0.00 1.52
389 390 1.886886 GGCAGTCCGACCAGTAAAAA 58.113 50.000 0.00 0.00 0.00 1.94
390 391 1.534163 GGCAGTCCGACCAGTAAAAAC 59.466 52.381 0.00 0.00 0.00 2.43
391 392 1.534163 GCAGTCCGACCAGTAAAAACC 59.466 52.381 0.00 0.00 0.00 3.27
392 393 2.809299 GCAGTCCGACCAGTAAAAACCT 60.809 50.000 0.00 0.00 0.00 3.50
393 394 3.555586 GCAGTCCGACCAGTAAAAACCTA 60.556 47.826 0.00 0.00 0.00 3.08
394 395 4.634199 CAGTCCGACCAGTAAAAACCTAA 58.366 43.478 0.00 0.00 0.00 2.69
395 396 5.058490 CAGTCCGACCAGTAAAAACCTAAA 58.942 41.667 0.00 0.00 0.00 1.85
396 397 5.049886 CAGTCCGACCAGTAAAAACCTAAAC 60.050 44.000 0.00 0.00 0.00 2.01
397 398 4.214119 GTCCGACCAGTAAAAACCTAAACC 59.786 45.833 0.00 0.00 0.00 3.27
398 399 4.102996 TCCGACCAGTAAAAACCTAAACCT 59.897 41.667 0.00 0.00 0.00 3.50
399 400 5.306678 TCCGACCAGTAAAAACCTAAACCTA 59.693 40.000 0.00 0.00 0.00 3.08
400 401 5.409520 CCGACCAGTAAAAACCTAAACCTAC 59.590 44.000 0.00 0.00 0.00 3.18
401 402 5.990996 CGACCAGTAAAAACCTAAACCTACA 59.009 40.000 0.00 0.00 0.00 2.74
402 403 6.146673 CGACCAGTAAAAACCTAAACCTACAG 59.853 42.308 0.00 0.00 0.00 2.74
403 404 5.766670 ACCAGTAAAAACCTAAACCTACAGC 59.233 40.000 0.00 0.00 0.00 4.40
404 405 5.182570 CCAGTAAAAACCTAAACCTACAGCC 59.817 44.000 0.00 0.00 0.00 4.85
405 406 6.002082 CAGTAAAAACCTAAACCTACAGCCT 58.998 40.000 0.00 0.00 0.00 4.58
406 407 6.148976 CAGTAAAAACCTAAACCTACAGCCTC 59.851 42.308 0.00 0.00 0.00 4.70
407 408 4.717279 AAAACCTAAACCTACAGCCTCA 57.283 40.909 0.00 0.00 0.00 3.86
408 409 3.697619 AACCTAAACCTACAGCCTCAC 57.302 47.619 0.00 0.00 0.00 3.51
409 410 1.907255 ACCTAAACCTACAGCCTCACC 59.093 52.381 0.00 0.00 0.00 4.02
410 411 1.134788 CCTAAACCTACAGCCTCACCG 60.135 57.143 0.00 0.00 0.00 4.94
411 412 0.899720 TAAACCTACAGCCTCACCGG 59.100 55.000 0.00 0.00 0.00 5.28
412 413 1.125711 AAACCTACAGCCTCACCGGT 61.126 55.000 0.00 0.00 34.25 5.28
413 414 1.125711 AACCTACAGCCTCACCGGTT 61.126 55.000 2.97 0.00 34.25 4.44
414 415 1.218316 CCTACAGCCTCACCGGTTC 59.782 63.158 2.97 0.00 34.25 3.62
415 416 1.153823 CTACAGCCTCACCGGTTCG 60.154 63.158 2.97 0.00 34.25 3.95
456 457 0.445436 GATGCAGTGCTTCTTCCACG 59.555 55.000 20.63 0.00 38.22 4.94
472 473 1.019278 CACGTCACATTCGGGAAGGG 61.019 60.000 0.00 0.00 33.17 3.95
499 500 0.398696 ATGGCGTCCACCACTAAACA 59.601 50.000 0.50 0.00 44.17 2.83
529 547 8.761575 CAATTATTGCCCATTTGATATACACC 57.238 34.615 0.00 0.00 0.00 4.16
530 548 8.366401 CAATTATTGCCCATTTGATATACACCA 58.634 33.333 0.00 0.00 0.00 4.17
531 549 8.669055 ATTATTGCCCATTTGATATACACCAT 57.331 30.769 0.00 0.00 0.00 3.55
533 551 5.059134 TGCCCATTTGATATACACCATGA 57.941 39.130 0.00 0.00 0.00 3.07
652 685 5.655488 CATGGCCAGTACTACTCATATAGC 58.345 45.833 13.05 0.00 0.00 2.97
659 697 7.065324 GCCAGTACTACTCATATAGCTAGAGTG 59.935 44.444 19.32 13.26 42.21 3.51
675 713 8.068892 AGCTAGAGTGTATATTGCTAATACCC 57.931 38.462 0.00 0.00 29.17 3.69
676 714 7.674348 AGCTAGAGTGTATATTGCTAATACCCA 59.326 37.037 0.00 0.00 29.17 4.51
677 715 7.760340 GCTAGAGTGTATATTGCTAATACCCAC 59.240 40.741 0.00 0.00 32.02 4.61
678 716 7.857404 AGAGTGTATATTGCTAATACCCACT 57.143 36.000 14.78 14.78 38.93 4.00
679 717 8.263854 AGAGTGTATATTGCTAATACCCACTT 57.736 34.615 15.38 8.83 37.57 3.16
680 718 9.375974 AGAGTGTATATTGCTAATACCCACTTA 57.624 33.333 15.38 0.00 37.57 2.24
681 719 9.420551 GAGTGTATATTGCTAATACCCACTTAC 57.579 37.037 15.38 6.23 37.57 2.34
698 801 5.452917 CCACTTACTAGTTAATAAGCCGGCT 60.453 44.000 27.08 27.08 32.58 5.52
699 802 6.047231 CACTTACTAGTTAATAAGCCGGCTT 58.953 40.000 41.05 41.05 34.71 4.35
1014 1548 1.960689 TCATGCATGCCATCATCCTTG 59.039 47.619 22.25 0.00 29.71 3.61
1018 1553 1.538204 GCATGCCATCATCCTTGCAAG 60.538 52.381 19.93 19.93 37.27 4.01
1022 1557 1.410004 CCATCATCCTTGCAAGGCAT 58.590 50.000 36.24 26.58 46.06 4.40
1047 1598 1.463674 CCACTCTTGGCCACATAACC 58.536 55.000 3.88 0.00 35.56 2.85
1049 1600 0.035439 ACTCTTGGCCACATAACCCG 60.035 55.000 3.88 0.00 0.00 5.28
1050 1601 0.748005 CTCTTGGCCACATAACCCGG 60.748 60.000 3.88 0.00 0.00 5.73
1052 1603 3.948004 TTGGCCACATAACCCGGGC 62.948 63.158 24.08 2.85 45.67 6.13
1203 1759 1.870055 GCTTCTCGGTGTACGTGGGA 61.870 60.000 0.00 0.00 44.69 4.37
1661 2530 8.840867 GTGCTTAATTTGCATATATTTAGACGC 58.159 33.333 8.66 0.00 42.69 5.19
1755 2649 0.810426 TGTAAGCGCGTGTGTTGGAA 60.810 50.000 8.43 0.00 0.00 3.53
1768 2663 5.681105 CGTGTGTTGGAAGTTCTTTGTATTG 59.319 40.000 2.25 0.00 0.00 1.90
1778 2673 3.907894 TCTTTGTATTGCCGGTTTCAC 57.092 42.857 1.90 0.00 0.00 3.18
2420 3315 7.918076 TGGGATACACAAGAAAGAGATTAACT 58.082 34.615 0.00 0.00 39.74 2.24
2421 3316 8.383175 TGGGATACACAAGAAAGAGATTAACTT 58.617 33.333 0.00 0.00 39.74 2.66
2422 3317 9.232473 GGGATACACAAGAAAGAGATTAACTTT 57.768 33.333 0.00 0.00 38.16 2.66
2425 3320 9.793259 ATACACAAGAAAGAGATTAACTTTGGA 57.207 29.630 0.00 0.00 37.64 3.53
2426 3321 8.697507 ACACAAGAAAGAGATTAACTTTGGAT 57.302 30.769 0.00 0.00 37.64 3.41
2427 3322 8.571336 ACACAAGAAAGAGATTAACTTTGGATG 58.429 33.333 0.00 0.00 37.64 3.51
2428 3323 8.025445 CACAAGAAAGAGATTAACTTTGGATGG 58.975 37.037 0.00 0.00 37.64 3.51
2429 3324 7.725844 ACAAGAAAGAGATTAACTTTGGATGGT 59.274 33.333 0.00 0.00 37.64 3.55
2430 3325 7.929941 AGAAAGAGATTAACTTTGGATGGTC 57.070 36.000 0.00 0.00 37.64 4.02
2431 3326 7.461749 AGAAAGAGATTAACTTTGGATGGTCA 58.538 34.615 0.00 0.00 37.64 4.02
2432 3327 8.112183 AGAAAGAGATTAACTTTGGATGGTCAT 58.888 33.333 0.00 0.00 37.64 3.06
2433 3328 8.655935 AAAGAGATTAACTTTGGATGGTCATT 57.344 30.769 0.00 0.00 36.43 2.57
2434 3329 8.655935 AAGAGATTAACTTTGGATGGTCATTT 57.344 30.769 0.00 0.00 0.00 2.32
2435 3330 8.655935 AGAGATTAACTTTGGATGGTCATTTT 57.344 30.769 0.00 0.00 0.00 1.82
2436 3331 8.526147 AGAGATTAACTTTGGATGGTCATTTTG 58.474 33.333 0.00 0.00 0.00 2.44
2437 3332 8.193953 AGATTAACTTTGGATGGTCATTTTGT 57.806 30.769 0.00 0.00 0.00 2.83
2438 3333 8.650490 AGATTAACTTTGGATGGTCATTTTGTT 58.350 29.630 0.00 0.00 0.00 2.83
2439 3334 9.271828 GATTAACTTTGGATGGTCATTTTGTTT 57.728 29.630 0.00 0.00 0.00 2.83
2440 3335 6.923928 AACTTTGGATGGTCATTTTGTTTG 57.076 33.333 0.00 0.00 0.00 2.93
2441 3336 6.232581 ACTTTGGATGGTCATTTTGTTTGA 57.767 33.333 0.00 0.00 0.00 2.69
2442 3337 6.829849 ACTTTGGATGGTCATTTTGTTTGAT 58.170 32.000 0.00 0.00 0.00 2.57
2443 3338 6.930722 ACTTTGGATGGTCATTTTGTTTGATC 59.069 34.615 0.00 0.00 0.00 2.92
2444 3339 6.669125 TTGGATGGTCATTTTGTTTGATCT 57.331 33.333 0.00 0.00 0.00 2.75
2445 3340 7.773489 TTGGATGGTCATTTTGTTTGATCTA 57.227 32.000 0.00 0.00 0.00 1.98
2446 3341 7.156876 TGGATGGTCATTTTGTTTGATCTAC 57.843 36.000 0.00 0.00 0.00 2.59
2447 3342 6.718912 TGGATGGTCATTTTGTTTGATCTACA 59.281 34.615 0.00 0.00 0.00 2.74
2448 3343 7.029563 GGATGGTCATTTTGTTTGATCTACAC 58.970 38.462 0.00 0.00 0.00 2.90
2449 3344 6.951062 TGGTCATTTTGTTTGATCTACACA 57.049 33.333 0.00 0.00 0.00 3.72
2450 3345 7.340122 TGGTCATTTTGTTTGATCTACACAA 57.660 32.000 0.00 0.00 0.00 3.33
2451 3346 7.424803 TGGTCATTTTGTTTGATCTACACAAG 58.575 34.615 0.00 0.00 0.00 3.16
2452 3347 7.068103 TGGTCATTTTGTTTGATCTACACAAGT 59.932 33.333 0.00 0.00 0.00 3.16
2453 3348 7.379529 GGTCATTTTGTTTGATCTACACAAGTG 59.620 37.037 0.00 0.00 0.00 3.16
2454 3349 7.379529 GTCATTTTGTTTGATCTACACAAGTGG 59.620 37.037 5.08 0.00 34.19 4.00
2455 3350 7.284261 TCATTTTGTTTGATCTACACAAGTGGA 59.716 33.333 5.08 0.00 39.70 4.02
2456 3351 6.371809 TTTGTTTGATCTACACAAGTGGAC 57.628 37.500 5.08 0.00 38.12 4.02
2457 3352 4.385825 TGTTTGATCTACACAAGTGGACC 58.614 43.478 5.08 0.00 38.12 4.46
2458 3353 4.141597 TGTTTGATCTACACAAGTGGACCA 60.142 41.667 5.08 0.00 38.12 4.02
2459 3354 4.908601 TTGATCTACACAAGTGGACCAT 57.091 40.909 0.00 0.00 38.12 3.55
2460 3355 4.206477 TGATCTACACAAGTGGACCATG 57.794 45.455 0.00 0.00 38.12 3.66
2461 3356 3.582647 TGATCTACACAAGTGGACCATGT 59.417 43.478 0.00 0.00 38.12 3.21
2466 3361 3.354089 CACAAGTGGACCATGTGTTTC 57.646 47.619 16.91 0.00 39.60 2.78
2467 3362 2.951642 CACAAGTGGACCATGTGTTTCT 59.048 45.455 16.91 0.00 39.60 2.52
2468 3363 3.381272 CACAAGTGGACCATGTGTTTCTT 59.619 43.478 16.91 3.26 39.60 2.52
2469 3364 4.023291 ACAAGTGGACCATGTGTTTCTTT 58.977 39.130 0.00 0.00 0.00 2.52
2470 3365 5.067153 CACAAGTGGACCATGTGTTTCTTTA 59.933 40.000 16.91 0.00 39.60 1.85
2471 3366 5.833131 ACAAGTGGACCATGTGTTTCTTTAT 59.167 36.000 0.00 0.00 0.00 1.40
2472 3367 5.964958 AGTGGACCATGTGTTTCTTTATG 57.035 39.130 0.00 0.00 0.00 1.90
2473 3368 5.630121 AGTGGACCATGTGTTTCTTTATGA 58.370 37.500 0.00 0.00 0.00 2.15
2474 3369 6.068010 AGTGGACCATGTGTTTCTTTATGAA 58.932 36.000 0.00 0.00 0.00 2.57
2475 3370 6.207417 AGTGGACCATGTGTTTCTTTATGAAG 59.793 38.462 0.00 0.00 35.89 3.02
2476 3371 6.016276 GTGGACCATGTGTTTCTTTATGAAGT 60.016 38.462 0.00 0.00 35.89 3.01
2477 3372 7.174253 GTGGACCATGTGTTTCTTTATGAAGTA 59.826 37.037 0.00 0.00 35.89 2.24
2478 3373 7.888021 TGGACCATGTGTTTCTTTATGAAGTAT 59.112 33.333 0.00 0.00 35.89 2.12
2479 3374 8.398665 GGACCATGTGTTTCTTTATGAAGTATC 58.601 37.037 0.00 0.00 35.89 2.24
2480 3375 7.974675 ACCATGTGTTTCTTTATGAAGTATCG 58.025 34.615 0.00 0.00 35.89 2.92
2481 3376 7.822334 ACCATGTGTTTCTTTATGAAGTATCGA 59.178 33.333 0.00 0.00 35.89 3.59
2482 3377 8.664798 CCATGTGTTTCTTTATGAAGTATCGAA 58.335 33.333 0.00 0.00 35.89 3.71
2483 3378 9.478019 CATGTGTTTCTTTATGAAGTATCGAAC 57.522 33.333 0.00 0.00 35.89 3.95
2484 3379 8.596271 TGTGTTTCTTTATGAAGTATCGAACA 57.404 30.769 0.00 1.05 35.89 3.18
2485 3380 9.214957 TGTGTTTCTTTATGAAGTATCGAACAT 57.785 29.630 0.00 0.00 35.89 2.71
2511 3406 7.616103 TTTTATGGCAATTTATATTGTCGCG 57.384 32.000 0.00 0.00 46.91 5.87
2512 3407 3.617540 TGGCAATTTATATTGTCGCGG 57.382 42.857 6.13 0.00 46.91 6.46
2513 3408 2.292016 TGGCAATTTATATTGTCGCGGG 59.708 45.455 6.13 0.00 46.91 6.13
2514 3409 2.292292 GGCAATTTATATTGTCGCGGGT 59.708 45.455 6.13 0.00 42.56 5.28
2515 3410 3.499157 GGCAATTTATATTGTCGCGGGTA 59.501 43.478 6.13 0.00 42.56 3.69
2516 3411 4.155280 GGCAATTTATATTGTCGCGGGTAT 59.845 41.667 6.13 2.60 42.56 2.73
2517 3412 5.335348 GGCAATTTATATTGTCGCGGGTATT 60.335 40.000 6.13 0.00 42.56 1.89
2518 3413 6.128227 GGCAATTTATATTGTCGCGGGTATTA 60.128 38.462 6.13 0.00 42.56 0.98
2519 3414 7.414762 GGCAATTTATATTGTCGCGGGTATTAT 60.415 37.037 6.13 0.62 42.56 1.28
2520 3415 8.605746 GCAATTTATATTGTCGCGGGTATTATA 58.394 33.333 6.13 0.00 42.56 0.98
2528 3423 8.611654 ATTGTCGCGGGTATTATAATTTTAGT 57.388 30.769 6.13 0.00 0.00 2.24
2529 3424 8.436046 TTGTCGCGGGTATTATAATTTTAGTT 57.564 30.769 6.13 0.00 0.00 2.24
2530 3425 8.436046 TGTCGCGGGTATTATAATTTTAGTTT 57.564 30.769 6.13 0.00 0.00 2.66
2531 3426 9.539825 TGTCGCGGGTATTATAATTTTAGTTTA 57.460 29.630 6.13 0.00 0.00 2.01
2532 3427 9.797473 GTCGCGGGTATTATAATTTTAGTTTAC 57.203 33.333 6.13 0.00 0.00 2.01
2533 3428 9.539825 TCGCGGGTATTATAATTTTAGTTTACA 57.460 29.630 6.13 0.00 0.00 2.41
2544 3439 9.717942 ATAATTTTAGTTTACAAGCATGGCAAA 57.282 25.926 0.00 0.00 0.00 3.68
2545 3440 6.836577 TTTTAGTTTACAAGCATGGCAAAC 57.163 33.333 11.31 11.31 0.00 2.93
2546 3441 3.385193 AGTTTACAAGCATGGCAAACC 57.615 42.857 14.14 0.00 24.57 3.27
2547 3442 2.037121 AGTTTACAAGCATGGCAAACCC 59.963 45.455 14.14 0.00 24.57 4.11
2548 3443 2.008242 TTACAAGCATGGCAAACCCT 57.992 45.000 0.00 0.00 33.59 4.34
2549 3444 1.255882 TACAAGCATGGCAAACCCTG 58.744 50.000 0.00 0.00 34.86 4.45
2550 3445 1.294138 CAAGCATGGCAAACCCTGG 59.706 57.895 0.00 0.00 32.52 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.221222 CTCCCAACTAGGAGCCGG 58.779 66.667 0.00 0.00 46.76 6.13
5 6 1.481871 CTTACGCCTCCCAACTAGGA 58.518 55.000 0.00 0.00 41.22 2.94
6 7 0.464452 CCTTACGCCTCCCAACTAGG 59.536 60.000 0.00 0.00 37.17 3.02
7 8 1.481871 TCCTTACGCCTCCCAACTAG 58.518 55.000 0.00 0.00 0.00 2.57
8 9 1.941377 TTCCTTACGCCTCCCAACTA 58.059 50.000 0.00 0.00 0.00 2.24
9 10 1.061546 TTTCCTTACGCCTCCCAACT 58.938 50.000 0.00 0.00 0.00 3.16
10 11 1.900245 TTTTCCTTACGCCTCCCAAC 58.100 50.000 0.00 0.00 0.00 3.77
11 12 2.660670 TTTTTCCTTACGCCTCCCAA 57.339 45.000 0.00 0.00 0.00 4.12
30 31 5.946377 AGGCTTTGCTATAGCTACACTTTTT 59.054 36.000 24.61 1.07 42.66 1.94
31 32 5.501156 AGGCTTTGCTATAGCTACACTTTT 58.499 37.500 24.61 2.40 42.66 2.27
32 33 5.104259 AGGCTTTGCTATAGCTACACTTT 57.896 39.130 24.61 3.66 42.66 2.66
33 34 4.762289 AGGCTTTGCTATAGCTACACTT 57.238 40.909 24.61 6.38 42.66 3.16
34 35 4.896482 ACTAGGCTTTGCTATAGCTACACT 59.104 41.667 24.61 17.21 42.66 3.55
35 36 4.985409 CACTAGGCTTTGCTATAGCTACAC 59.015 45.833 24.61 11.74 42.66 2.90
36 37 4.893524 TCACTAGGCTTTGCTATAGCTACA 59.106 41.667 24.61 6.98 42.66 2.74
37 38 5.455056 TCACTAGGCTTTGCTATAGCTAC 57.545 43.478 24.61 11.39 42.66 3.58
38 39 5.567623 GCATCACTAGGCTTTGCTATAGCTA 60.568 44.000 24.61 15.37 42.66 3.32
39 40 4.802248 GCATCACTAGGCTTTGCTATAGCT 60.802 45.833 24.61 6.71 42.66 3.32
40 41 3.434984 GCATCACTAGGCTTTGCTATAGC 59.565 47.826 18.18 18.18 42.50 2.97
41 42 4.635223 TGCATCACTAGGCTTTGCTATAG 58.365 43.478 0.00 0.00 34.47 1.31
42 43 4.344968 TCTGCATCACTAGGCTTTGCTATA 59.655 41.667 0.00 0.00 34.47 1.31
43 44 3.135348 TCTGCATCACTAGGCTTTGCTAT 59.865 43.478 0.00 0.00 34.47 2.97
44 45 2.501316 TCTGCATCACTAGGCTTTGCTA 59.499 45.455 0.00 0.00 34.47 3.49
45 46 1.280133 TCTGCATCACTAGGCTTTGCT 59.720 47.619 0.00 0.00 34.47 3.91
46 47 1.742761 TCTGCATCACTAGGCTTTGC 58.257 50.000 0.00 0.00 32.35 3.68
47 48 6.462500 ACTATATCTGCATCACTAGGCTTTG 58.538 40.000 0.00 0.00 32.35 2.77
48 49 6.678568 ACTATATCTGCATCACTAGGCTTT 57.321 37.500 0.00 0.00 32.35 3.51
49 50 6.042552 ACAACTATATCTGCATCACTAGGCTT 59.957 38.462 0.00 0.00 32.35 4.35
50 51 5.541868 ACAACTATATCTGCATCACTAGGCT 59.458 40.000 0.00 0.00 32.35 4.58
51 52 5.788450 ACAACTATATCTGCATCACTAGGC 58.212 41.667 0.00 0.00 0.00 3.93
52 53 9.764363 TTTTACAACTATATCTGCATCACTAGG 57.236 33.333 0.00 0.00 0.00 3.02
55 56 8.893727 GGTTTTTACAACTATATCTGCATCACT 58.106 33.333 0.00 0.00 0.00 3.41
56 57 7.850982 CGGTTTTTACAACTATATCTGCATCAC 59.149 37.037 0.00 0.00 0.00 3.06
57 58 7.011950 CCGGTTTTTACAACTATATCTGCATCA 59.988 37.037 0.00 0.00 0.00 3.07
58 59 7.225931 TCCGGTTTTTACAACTATATCTGCATC 59.774 37.037 0.00 0.00 0.00 3.91
59 60 7.012044 GTCCGGTTTTTACAACTATATCTGCAT 59.988 37.037 0.00 0.00 0.00 3.96
60 61 6.314400 GTCCGGTTTTTACAACTATATCTGCA 59.686 38.462 0.00 0.00 0.00 4.41
61 62 6.238293 GGTCCGGTTTTTACAACTATATCTGC 60.238 42.308 0.00 0.00 0.00 4.26
62 63 6.019318 CGGTCCGGTTTTTACAACTATATCTG 60.019 42.308 2.34 0.00 0.00 2.90
63 64 6.044682 CGGTCCGGTTTTTACAACTATATCT 58.955 40.000 2.34 0.00 0.00 1.98
64 65 5.234972 CCGGTCCGGTTTTTACAACTATATC 59.765 44.000 23.02 0.00 42.73 1.63
65 66 5.118286 CCGGTCCGGTTTTTACAACTATAT 58.882 41.667 23.02 0.00 42.73 0.86
66 67 4.502962 CCGGTCCGGTTTTTACAACTATA 58.497 43.478 23.02 0.00 42.73 1.31
67 68 3.337358 CCGGTCCGGTTTTTACAACTAT 58.663 45.455 23.02 0.00 42.73 2.12
68 69 2.765122 CCGGTCCGGTTTTTACAACTA 58.235 47.619 23.02 0.00 42.73 2.24
69 70 1.596603 CCGGTCCGGTTTTTACAACT 58.403 50.000 23.02 0.00 42.73 3.16
92 93 0.887836 GGTTTTCCAGTCGGACCACC 60.888 60.000 4.14 0.00 42.67 4.61
93 94 1.226030 CGGTTTTCCAGTCGGACCAC 61.226 60.000 4.14 0.00 42.67 4.16
94 95 1.070105 CGGTTTTCCAGTCGGACCA 59.930 57.895 4.14 0.00 42.67 4.02
95 96 1.670083 CCGGTTTTCCAGTCGGACC 60.670 63.158 4.14 0.00 42.67 4.46
96 97 1.670083 CCCGGTTTTCCAGTCGGAC 60.670 63.158 0.00 0.00 42.67 4.79
97 98 1.409251 TTCCCGGTTTTCCAGTCGGA 61.409 55.000 0.00 0.00 44.69 4.55
98 99 1.071814 TTCCCGGTTTTCCAGTCGG 59.928 57.895 0.00 0.00 40.70 4.79
99 100 0.533308 TGTTCCCGGTTTTCCAGTCG 60.533 55.000 0.00 0.00 40.70 4.18
100 101 0.949397 GTGTTCCCGGTTTTCCAGTC 59.051 55.000 0.00 0.00 40.70 3.51
101 102 0.549469 AGTGTTCCCGGTTTTCCAGT 59.451 50.000 0.00 0.00 40.70 4.00
102 103 0.951558 CAGTGTTCCCGGTTTTCCAG 59.048 55.000 0.00 0.00 40.70 3.86
103 104 1.104577 GCAGTGTTCCCGGTTTTCCA 61.105 55.000 0.00 0.00 40.70 3.53
104 105 1.658114 GCAGTGTTCCCGGTTTTCC 59.342 57.895 0.00 0.00 0.00 3.13
105 106 0.822121 AGGCAGTGTTCCCGGTTTTC 60.822 55.000 0.00 0.00 0.00 2.29
106 107 0.396556 AAGGCAGTGTTCCCGGTTTT 60.397 50.000 0.00 0.00 0.00 2.43
107 108 1.106944 CAAGGCAGTGTTCCCGGTTT 61.107 55.000 0.00 0.00 0.00 3.27
108 109 1.528309 CAAGGCAGTGTTCCCGGTT 60.528 57.895 0.00 0.00 0.00 4.44
109 110 2.113139 CAAGGCAGTGTTCCCGGT 59.887 61.111 0.00 0.00 0.00 5.28
110 111 3.365265 GCAAGGCAGTGTTCCCGG 61.365 66.667 0.00 0.00 0.00 5.73
111 112 3.365265 GGCAAGGCAGTGTTCCCG 61.365 66.667 0.00 0.00 0.00 5.14
112 113 2.991540 GGGCAAGGCAGTGTTCCC 60.992 66.667 0.00 0.00 0.00 3.97
113 114 2.991540 GGGGCAAGGCAGTGTTCC 60.992 66.667 0.00 0.00 0.00 3.62
114 115 1.115326 AAAGGGGCAAGGCAGTGTTC 61.115 55.000 0.00 0.00 0.00 3.18
115 116 0.690744 AAAAGGGGCAAGGCAGTGTT 60.691 50.000 0.00 0.00 0.00 3.32
116 117 0.690744 AAAAAGGGGCAAGGCAGTGT 60.691 50.000 0.00 0.00 0.00 3.55
117 118 1.337118 TAAAAAGGGGCAAGGCAGTG 58.663 50.000 0.00 0.00 0.00 3.66
118 119 2.095604 TTAAAAAGGGGCAAGGCAGT 57.904 45.000 0.00 0.00 0.00 4.40
119 120 3.181455 ACTTTTAAAAAGGGGCAAGGCAG 60.181 43.478 1.66 0.00 0.00 4.85
120 121 2.774809 ACTTTTAAAAAGGGGCAAGGCA 59.225 40.909 1.66 0.00 0.00 4.75
121 122 3.138304 CACTTTTAAAAAGGGGCAAGGC 58.862 45.455 1.66 0.00 0.00 4.35
122 123 4.126437 CACACTTTTAAAAAGGGGCAAGG 58.874 43.478 5.07 0.00 0.00 3.61
123 124 4.765273 ACACACTTTTAAAAAGGGGCAAG 58.235 39.130 5.07 0.00 0.00 4.01
124 125 4.678309 CGACACACTTTTAAAAAGGGGCAA 60.678 41.667 5.07 0.00 0.00 4.52
125 126 3.181485 CGACACACTTTTAAAAAGGGGCA 60.181 43.478 5.07 0.00 0.00 5.36
126 127 3.377439 CGACACACTTTTAAAAAGGGGC 58.623 45.455 5.07 0.32 0.00 5.80
127 128 3.382227 ACCGACACACTTTTAAAAAGGGG 59.618 43.478 1.66 4.39 0.00 4.79
128 129 4.337274 AGACCGACACACTTTTAAAAAGGG 59.663 41.667 1.66 3.35 0.00 3.95
129 130 5.494632 AGACCGACACACTTTTAAAAAGG 57.505 39.130 1.66 2.32 0.00 3.11
130 131 7.806149 AAAAGACCGACACACTTTTAAAAAG 57.194 32.000 1.66 0.00 40.48 2.27
131 132 8.513774 ACTAAAAGACCGACACACTTTTAAAAA 58.486 29.630 1.66 0.00 41.90 1.94
132 133 8.042944 ACTAAAAGACCGACACACTTTTAAAA 57.957 30.769 0.00 0.00 41.90 1.52
133 134 7.614124 ACTAAAAGACCGACACACTTTTAAA 57.386 32.000 0.00 0.00 41.90 1.52
134 135 8.715191 TTACTAAAAGACCGACACACTTTTAA 57.285 30.769 0.00 0.00 41.90 1.52
135 136 8.196771 TCTTACTAAAAGACCGACACACTTTTA 58.803 33.333 0.00 0.00 41.75 1.52
136 137 7.043565 TCTTACTAAAAGACCGACACACTTTT 58.956 34.615 0.00 0.00 43.25 2.27
137 138 6.576185 TCTTACTAAAAGACCGACACACTTT 58.424 36.000 0.00 0.00 35.74 2.66
138 139 6.152932 TCTTACTAAAAGACCGACACACTT 57.847 37.500 0.00 0.00 0.00 3.16
139 140 5.779529 TCTTACTAAAAGACCGACACACT 57.220 39.130 0.00 0.00 0.00 3.55
140 141 6.833342 TTTCTTACTAAAAGACCGACACAC 57.167 37.500 0.00 0.00 0.00 3.82
141 142 7.333921 TGTTTTTCTTACTAAAAGACCGACACA 59.666 33.333 0.00 0.00 30.47 3.72
142 143 7.687445 TGTTTTTCTTACTAAAAGACCGACAC 58.313 34.615 0.00 0.00 30.47 3.67
143 144 7.846644 TGTTTTTCTTACTAAAAGACCGACA 57.153 32.000 0.00 0.00 30.47 4.35
170 171 8.266392 TCAATTTCTTGTTGATGCAACTTTTT 57.734 26.923 11.11 0.00 43.85 1.94
171 172 7.846644 TCAATTTCTTGTTGATGCAACTTTT 57.153 28.000 11.11 0.00 43.85 2.27
172 173 7.333921 TGTTCAATTTCTTGTTGATGCAACTTT 59.666 29.630 11.11 0.00 43.85 2.66
173 174 6.817641 TGTTCAATTTCTTGTTGATGCAACTT 59.182 30.769 11.11 0.00 43.85 2.66
174 175 6.339730 TGTTCAATTTCTTGTTGATGCAACT 58.660 32.000 11.11 0.00 43.85 3.16
175 176 6.586868 TGTTCAATTTCTTGTTGATGCAAC 57.413 33.333 0.00 3.47 43.78 4.17
176 177 6.817641 AGTTGTTCAATTTCTTGTTGATGCAA 59.182 30.769 0.00 0.00 35.68 4.08
177 178 6.339730 AGTTGTTCAATTTCTTGTTGATGCA 58.660 32.000 0.00 0.00 35.68 3.96
178 179 6.833342 AGTTGTTCAATTTCTTGTTGATGC 57.167 33.333 0.00 0.00 35.68 3.91
179 180 8.755018 GGTTAGTTGTTCAATTTCTTGTTGATG 58.245 33.333 0.00 0.00 35.68 3.07
180 181 8.695456 AGGTTAGTTGTTCAATTTCTTGTTGAT 58.305 29.630 0.00 0.00 35.68 2.57
181 182 8.062065 AGGTTAGTTGTTCAATTTCTTGTTGA 57.938 30.769 0.00 0.00 34.01 3.18
182 183 8.594687 CAAGGTTAGTTGTTCAATTTCTTGTTG 58.405 33.333 0.00 0.00 33.87 3.33
183 184 8.527810 TCAAGGTTAGTTGTTCAATTTCTTGTT 58.472 29.630 0.00 0.00 33.87 2.83
184 185 8.062065 TCAAGGTTAGTTGTTCAATTTCTTGT 57.938 30.769 0.00 0.00 33.87 3.16
185 186 7.649306 CCTCAAGGTTAGTTGTTCAATTTCTTG 59.351 37.037 0.00 0.00 0.00 3.02
186 187 7.684428 GCCTCAAGGTTAGTTGTTCAATTTCTT 60.684 37.037 0.00 0.00 37.57 2.52
187 188 6.239036 GCCTCAAGGTTAGTTGTTCAATTTCT 60.239 38.462 0.00 0.00 37.57 2.52
188 189 5.920840 GCCTCAAGGTTAGTTGTTCAATTTC 59.079 40.000 0.00 0.00 37.57 2.17
189 190 5.362430 TGCCTCAAGGTTAGTTGTTCAATTT 59.638 36.000 0.00 0.00 37.57 1.82
190 191 4.892934 TGCCTCAAGGTTAGTTGTTCAATT 59.107 37.500 0.00 0.00 37.57 2.32
191 192 4.469657 TGCCTCAAGGTTAGTTGTTCAAT 58.530 39.130 0.00 0.00 37.57 2.57
192 193 3.892284 TGCCTCAAGGTTAGTTGTTCAA 58.108 40.909 0.00 0.00 37.57 2.69
193 194 3.569194 TGCCTCAAGGTTAGTTGTTCA 57.431 42.857 0.00 0.00 37.57 3.18
194 195 4.489679 CTTGCCTCAAGGTTAGTTGTTC 57.510 45.455 0.00 0.00 37.77 3.18
205 206 1.471119 ATCACATGCCTTGCCTCAAG 58.529 50.000 0.00 0.00 40.75 3.02
206 207 2.754552 GTTATCACATGCCTTGCCTCAA 59.245 45.455 0.00 0.00 0.00 3.02
207 208 2.368439 GTTATCACATGCCTTGCCTCA 58.632 47.619 0.00 0.00 0.00 3.86
208 209 1.678101 GGTTATCACATGCCTTGCCTC 59.322 52.381 0.00 0.00 0.00 4.70
209 210 1.005805 TGGTTATCACATGCCTTGCCT 59.994 47.619 0.00 0.00 0.00 4.75
210 211 1.473258 TGGTTATCACATGCCTTGCC 58.527 50.000 0.00 0.00 0.00 4.52
211 212 2.493278 AGTTGGTTATCACATGCCTTGC 59.507 45.455 0.00 0.00 0.00 4.01
212 213 5.065218 GTCTAGTTGGTTATCACATGCCTTG 59.935 44.000 0.00 0.00 0.00 3.61
213 214 5.045578 AGTCTAGTTGGTTATCACATGCCTT 60.046 40.000 0.00 0.00 0.00 4.35
214 215 4.471386 AGTCTAGTTGGTTATCACATGCCT 59.529 41.667 0.00 0.00 0.00 4.75
215 216 4.770795 AGTCTAGTTGGTTATCACATGCC 58.229 43.478 0.00 0.00 0.00 4.40
216 217 9.542462 TTATTAGTCTAGTTGGTTATCACATGC 57.458 33.333 0.00 0.00 0.00 4.06
219 220 9.865321 GTGTTATTAGTCTAGTTGGTTATCACA 57.135 33.333 0.00 0.00 0.00 3.58
225 226 9.052759 CACAAAGTGTTATTAGTCTAGTTGGTT 57.947 33.333 0.00 0.00 0.00 3.67
226 227 8.426489 TCACAAAGTGTTATTAGTCTAGTTGGT 58.574 33.333 0.00 0.00 34.79 3.67
227 228 8.827177 TCACAAAGTGTTATTAGTCTAGTTGG 57.173 34.615 0.00 0.00 34.79 3.77
241 242 9.325150 CGAACGATTAATAAATCACAAAGTGTT 57.675 29.630 0.00 0.00 41.44 3.32
242 243 7.480542 GCGAACGATTAATAAATCACAAAGTGT 59.519 33.333 0.00 0.00 41.44 3.55
243 244 7.480229 TGCGAACGATTAATAAATCACAAAGTG 59.520 33.333 0.00 0.00 41.44 3.16
244 245 7.523219 TGCGAACGATTAATAAATCACAAAGT 58.477 30.769 0.00 0.00 41.44 2.66
245 246 7.946918 TGCGAACGATTAATAAATCACAAAG 57.053 32.000 0.00 0.00 41.44 2.77
246 247 7.642194 GGATGCGAACGATTAATAAATCACAAA 59.358 33.333 0.00 0.00 41.44 2.83
247 248 7.129622 GGATGCGAACGATTAATAAATCACAA 58.870 34.615 0.00 0.00 41.44 3.33
248 249 6.258947 TGGATGCGAACGATTAATAAATCACA 59.741 34.615 0.00 0.00 41.44 3.58
249 250 6.655062 TGGATGCGAACGATTAATAAATCAC 58.345 36.000 0.00 0.00 41.44 3.06
250 251 6.852858 TGGATGCGAACGATTAATAAATCA 57.147 33.333 0.00 0.00 41.44 2.57
251 252 9.262472 GTATTGGATGCGAACGATTAATAAATC 57.738 33.333 0.00 0.00 38.53 2.17
252 253 8.999431 AGTATTGGATGCGAACGATTAATAAAT 58.001 29.630 0.00 0.00 0.00 1.40
253 254 8.373048 AGTATTGGATGCGAACGATTAATAAA 57.627 30.769 0.00 0.00 0.00 1.40
254 255 7.956420 AGTATTGGATGCGAACGATTAATAA 57.044 32.000 0.00 0.00 0.00 1.40
255 256 7.271868 CGTAGTATTGGATGCGAACGATTAATA 59.728 37.037 0.00 0.00 33.57 0.98
256 257 6.089016 CGTAGTATTGGATGCGAACGATTAAT 59.911 38.462 0.00 0.00 33.57 1.40
257 258 5.400188 CGTAGTATTGGATGCGAACGATTAA 59.600 40.000 0.00 0.00 33.57 1.40
258 259 4.913345 CGTAGTATTGGATGCGAACGATTA 59.087 41.667 0.00 0.00 33.57 1.75
259 260 3.734231 CGTAGTATTGGATGCGAACGATT 59.266 43.478 0.00 0.00 33.57 3.34
260 261 3.243301 ACGTAGTATTGGATGCGAACGAT 60.243 43.478 3.73 0.00 41.94 3.73
261 262 2.097954 ACGTAGTATTGGATGCGAACGA 59.902 45.455 3.73 0.00 41.94 3.85
262 263 2.215587 CACGTAGTATTGGATGCGAACG 59.784 50.000 0.00 0.00 41.61 3.95
263 264 3.184541 ACACGTAGTATTGGATGCGAAC 58.815 45.455 0.00 0.00 41.61 3.95
264 265 3.513680 ACACGTAGTATTGGATGCGAA 57.486 42.857 0.00 0.00 41.61 4.70
265 266 4.841443 ATACACGTAGTATTGGATGCGA 57.159 40.909 0.00 0.00 41.61 5.10
275 276 9.333724 TCTCACATCTAATGAATACACGTAGTA 57.666 33.333 0.00 0.00 41.61 1.82
277 278 9.335891 GATCTCACATCTAATGAATACACGTAG 57.664 37.037 0.00 0.00 0.00 3.51
278 279 8.846211 TGATCTCACATCTAATGAATACACGTA 58.154 33.333 0.00 0.00 0.00 3.57
279 280 7.716612 TGATCTCACATCTAATGAATACACGT 58.283 34.615 0.00 0.00 0.00 4.49
280 281 8.579682 TTGATCTCACATCTAATGAATACACG 57.420 34.615 0.00 0.00 0.00 4.49
311 312 9.487442 AGCTGGAATATTTAAGGTTATTTTCCA 57.513 29.630 8.56 8.56 38.61 3.53
317 318 9.700831 ACAAGAAGCTGGAATATTTAAGGTTAT 57.299 29.630 12.88 9.07 30.95 1.89
318 319 9.528489 AACAAGAAGCTGGAATATTTAAGGTTA 57.472 29.630 12.88 0.00 30.95 2.85
319 320 8.306761 CAACAAGAAGCTGGAATATTTAAGGTT 58.693 33.333 12.80 12.80 33.33 3.50
320 321 7.577616 GCAACAAGAAGCTGGAATATTTAAGGT 60.578 37.037 0.00 0.00 0.00 3.50
321 322 6.753744 GCAACAAGAAGCTGGAATATTTAAGG 59.246 38.462 0.00 0.00 0.00 2.69
322 323 7.315142 TGCAACAAGAAGCTGGAATATTTAAG 58.685 34.615 0.00 0.00 0.00 1.85
323 324 7.225784 TGCAACAAGAAGCTGGAATATTTAA 57.774 32.000 0.00 0.00 0.00 1.52
324 325 6.832520 TGCAACAAGAAGCTGGAATATTTA 57.167 33.333 0.00 0.00 0.00 1.40
325 326 5.726980 TGCAACAAGAAGCTGGAATATTT 57.273 34.783 0.00 0.00 0.00 1.40
326 327 5.726980 TTGCAACAAGAAGCTGGAATATT 57.273 34.783 0.00 0.00 0.00 1.28
327 328 5.726980 TTTGCAACAAGAAGCTGGAATAT 57.273 34.783 0.00 0.00 0.00 1.28
328 329 5.243507 TCATTTGCAACAAGAAGCTGGAATA 59.756 36.000 0.00 0.00 0.00 1.75
329 330 4.039488 TCATTTGCAACAAGAAGCTGGAAT 59.961 37.500 0.00 0.00 0.00 3.01
330 331 3.384146 TCATTTGCAACAAGAAGCTGGAA 59.616 39.130 0.00 0.00 0.00 3.53
331 332 2.957680 TCATTTGCAACAAGAAGCTGGA 59.042 40.909 0.00 0.00 0.00 3.86
332 333 3.374220 TCATTTGCAACAAGAAGCTGG 57.626 42.857 0.00 0.00 0.00 4.85
333 334 4.208460 CAGTTCATTTGCAACAAGAAGCTG 59.792 41.667 0.00 9.80 0.00 4.24
334 335 4.098349 TCAGTTCATTTGCAACAAGAAGCT 59.902 37.500 0.00 2.10 0.00 3.74
335 336 4.362279 TCAGTTCATTTGCAACAAGAAGC 58.638 39.130 0.00 0.00 0.00 3.86
336 337 8.482429 GTTTATCAGTTCATTTGCAACAAGAAG 58.518 33.333 0.00 0.00 0.00 2.85
337 338 7.978414 TGTTTATCAGTTCATTTGCAACAAGAA 59.022 29.630 0.00 0.56 0.00 2.52
338 339 7.487484 TGTTTATCAGTTCATTTGCAACAAGA 58.513 30.769 0.00 0.00 0.00 3.02
339 340 7.697352 TGTTTATCAGTTCATTTGCAACAAG 57.303 32.000 0.00 0.00 0.00 3.16
340 341 9.755804 TTATGTTTATCAGTTCATTTGCAACAA 57.244 25.926 0.00 0.00 0.00 2.83
341 342 9.755804 TTTATGTTTATCAGTTCATTTGCAACA 57.244 25.926 0.00 0.00 0.00 3.33
343 344 9.202273 GGTTTATGTTTATCAGTTCATTTGCAA 57.798 29.630 0.00 0.00 0.00 4.08
344 345 7.540400 CGGTTTATGTTTATCAGTTCATTTGCA 59.460 33.333 0.00 0.00 0.00 4.08
345 346 7.009174 CCGGTTTATGTTTATCAGTTCATTTGC 59.991 37.037 0.00 0.00 0.00 3.68
346 347 7.009174 GCCGGTTTATGTTTATCAGTTCATTTG 59.991 37.037 1.90 0.00 0.00 2.32
347 348 7.033185 GCCGGTTTATGTTTATCAGTTCATTT 58.967 34.615 1.90 0.00 0.00 2.32
348 349 6.151985 TGCCGGTTTATGTTTATCAGTTCATT 59.848 34.615 1.90 0.00 0.00 2.57
349 350 5.650266 TGCCGGTTTATGTTTATCAGTTCAT 59.350 36.000 1.90 0.00 0.00 2.57
350 351 5.004448 TGCCGGTTTATGTTTATCAGTTCA 58.996 37.500 1.90 0.00 0.00 3.18
351 352 5.123344 ACTGCCGGTTTATGTTTATCAGTTC 59.877 40.000 1.90 0.00 0.00 3.01
352 353 5.007682 ACTGCCGGTTTATGTTTATCAGTT 58.992 37.500 1.90 0.00 0.00 3.16
353 354 4.585879 ACTGCCGGTTTATGTTTATCAGT 58.414 39.130 1.90 0.00 0.00 3.41
354 355 4.035208 GGACTGCCGGTTTATGTTTATCAG 59.965 45.833 1.90 0.00 0.00 2.90
355 356 3.942748 GGACTGCCGGTTTATGTTTATCA 59.057 43.478 1.90 0.00 0.00 2.15
356 357 4.547406 GGACTGCCGGTTTATGTTTATC 57.453 45.455 1.90 0.00 0.00 1.75
370 371 1.534163 GTTTTTACTGGTCGGACTGCC 59.466 52.381 8.23 0.00 0.00 4.85
371 372 1.534163 GGTTTTTACTGGTCGGACTGC 59.466 52.381 8.23 0.00 0.00 4.40
372 373 3.121738 AGGTTTTTACTGGTCGGACTG 57.878 47.619 8.23 4.31 0.00 3.51
373 374 4.961438 TTAGGTTTTTACTGGTCGGACT 57.039 40.909 8.23 0.00 0.00 3.85
374 375 4.214119 GGTTTAGGTTTTTACTGGTCGGAC 59.786 45.833 0.00 0.00 0.00 4.79
375 376 4.102996 AGGTTTAGGTTTTTACTGGTCGGA 59.897 41.667 0.00 0.00 0.00 4.55
376 377 4.392047 AGGTTTAGGTTTTTACTGGTCGG 58.608 43.478 0.00 0.00 0.00 4.79
377 378 5.990996 TGTAGGTTTAGGTTTTTACTGGTCG 59.009 40.000 0.00 0.00 0.00 4.79
378 379 6.072838 GCTGTAGGTTTAGGTTTTTACTGGTC 60.073 42.308 0.00 0.00 0.00 4.02
379 380 5.766670 GCTGTAGGTTTAGGTTTTTACTGGT 59.233 40.000 0.00 0.00 0.00 4.00
380 381 5.182570 GGCTGTAGGTTTAGGTTTTTACTGG 59.817 44.000 0.00 0.00 0.00 4.00
381 382 6.002082 AGGCTGTAGGTTTAGGTTTTTACTG 58.998 40.000 0.00 0.00 0.00 2.74
382 383 6.183361 TGAGGCTGTAGGTTTAGGTTTTTACT 60.183 38.462 0.00 0.00 0.00 2.24
383 384 5.999600 TGAGGCTGTAGGTTTAGGTTTTTAC 59.000 40.000 0.00 0.00 0.00 2.01
384 385 5.999600 GTGAGGCTGTAGGTTTAGGTTTTTA 59.000 40.000 0.00 0.00 0.00 1.52
385 386 4.825634 GTGAGGCTGTAGGTTTAGGTTTTT 59.174 41.667 0.00 0.00 0.00 1.94
386 387 4.395625 GTGAGGCTGTAGGTTTAGGTTTT 58.604 43.478 0.00 0.00 0.00 2.43
387 388 3.244805 GGTGAGGCTGTAGGTTTAGGTTT 60.245 47.826 0.00 0.00 0.00 3.27
388 389 2.305052 GGTGAGGCTGTAGGTTTAGGTT 59.695 50.000 0.00 0.00 0.00 3.50
389 390 1.907255 GGTGAGGCTGTAGGTTTAGGT 59.093 52.381 0.00 0.00 0.00 3.08
390 391 1.134788 CGGTGAGGCTGTAGGTTTAGG 60.135 57.143 0.00 0.00 0.00 2.69
391 392 1.134788 CCGGTGAGGCTGTAGGTTTAG 60.135 57.143 0.00 0.00 0.00 1.85
392 393 0.899720 CCGGTGAGGCTGTAGGTTTA 59.100 55.000 0.00 0.00 0.00 2.01
393 394 1.125711 ACCGGTGAGGCTGTAGGTTT 61.126 55.000 6.12 0.00 46.52 3.27
394 395 1.125711 AACCGGTGAGGCTGTAGGTT 61.126 55.000 8.52 0.00 46.52 3.50
395 396 1.535687 AACCGGTGAGGCTGTAGGT 60.536 57.895 8.52 0.00 46.52 3.08
396 397 1.218316 GAACCGGTGAGGCTGTAGG 59.782 63.158 8.52 0.00 46.52 3.18
397 398 1.153823 CGAACCGGTGAGGCTGTAG 60.154 63.158 8.52 0.00 46.52 2.74
398 399 2.642254 CCGAACCGGTGAGGCTGTA 61.642 63.158 8.52 0.00 46.52 2.74
399 400 4.003788 CCGAACCGGTGAGGCTGT 62.004 66.667 8.52 0.00 46.52 4.40
456 457 0.037734 AACCCCTTCCCGAATGTGAC 59.962 55.000 0.00 0.00 0.00 3.67
472 473 2.033448 TGGACGCCATGGTCAACC 59.967 61.111 14.67 12.28 38.70 3.77
584 605 5.123820 GTGGATTTTGTGATTGCAGTAGCTA 59.876 40.000 0.00 0.00 42.74 3.32
586 607 4.082571 AGTGGATTTTGTGATTGCAGTAGC 60.083 41.667 0.00 0.00 42.57 3.58
587 608 5.633830 AGTGGATTTTGTGATTGCAGTAG 57.366 39.130 0.00 0.00 0.00 2.57
588 609 5.771469 CAAGTGGATTTTGTGATTGCAGTA 58.229 37.500 0.00 0.00 0.00 2.74
589 610 4.624015 CAAGTGGATTTTGTGATTGCAGT 58.376 39.130 0.00 0.00 0.00 4.40
652 685 9.026121 AGTGGGTATTAGCAATATACACTCTAG 57.974 37.037 14.83 0.00 38.04 2.43
671 709 6.040842 CCGGCTTATTAACTAGTAAGTGGGTA 59.959 42.308 0.00 0.00 35.62 3.69
672 710 5.163374 CCGGCTTATTAACTAGTAAGTGGGT 60.163 44.000 0.00 0.00 35.62 4.51
673 711 5.295152 CCGGCTTATTAACTAGTAAGTGGG 58.705 45.833 0.00 0.00 35.62 4.61
675 713 5.598769 AGCCGGCTTATTAACTAGTAAGTG 58.401 41.667 27.08 0.00 35.62 3.16
676 714 5.866159 AGCCGGCTTATTAACTAGTAAGT 57.134 39.130 27.08 0.00 37.65 2.24
677 715 6.365518 GCTAAGCCGGCTTATTAACTAGTAAG 59.634 42.308 41.07 29.18 37.81 2.34
678 716 6.183360 TGCTAAGCCGGCTTATTAACTAGTAA 60.183 38.462 41.07 21.79 37.81 2.24
679 717 5.302568 TGCTAAGCCGGCTTATTAACTAGTA 59.697 40.000 41.07 28.55 37.81 1.82
680 718 4.100498 TGCTAAGCCGGCTTATTAACTAGT 59.900 41.667 41.07 20.70 37.81 2.57
681 719 4.628074 TGCTAAGCCGGCTTATTAACTAG 58.372 43.478 41.07 31.55 37.81 2.57
690 793 2.289565 GACTTATTGCTAAGCCGGCTT 58.710 47.619 41.05 41.05 38.33 4.35
749 1241 1.229209 ACGAGGAGGAAGGCAAGGA 60.229 57.895 0.00 0.00 0.00 3.36
829 1335 0.099968 CGAGGGCATGCATTGACTTG 59.900 55.000 21.36 8.93 32.03 3.16
853 1359 1.477014 GCTAGCCCCATTAGTTGACCC 60.477 57.143 2.29 0.00 0.00 4.46
993 1527 2.364002 CAAGGATGATGGCATGCATGAA 59.636 45.455 30.64 17.29 41.99 2.57
1014 1548 1.133976 AGAGTGGTGGATATGCCTTGC 60.134 52.381 0.00 0.00 37.63 4.01
1018 1553 1.972872 CCAAGAGTGGTGGATATGCC 58.027 55.000 0.00 0.00 40.42 4.40
1057 1608 2.421073 CCATATATGCTGCCGGTTGATG 59.579 50.000 7.24 0.00 0.00 3.07
1058 1609 2.715046 CCATATATGCTGCCGGTTGAT 58.285 47.619 7.24 0.00 0.00 2.57
1061 1617 0.955428 CGCCATATATGCTGCCGGTT 60.955 55.000 7.24 0.00 0.00 4.44
1068 1624 1.448540 GCTCGCCGCCATATATGCT 60.449 57.895 7.24 0.00 0.00 3.79
1583 2139 0.321346 TCTCGGTTCTGCATGCAAGA 59.679 50.000 22.88 17.03 0.00 3.02
1613 2479 1.552348 GCTCGATCTGTGTATGCGCC 61.552 60.000 4.18 0.00 0.00 6.53
1653 2522 1.139256 TGTGTGGTTGAGGCGTCTAAA 59.861 47.619 8.06 0.00 0.00 1.85
1661 2530 2.013807 CGTGTGTGTGTGGTTGAGG 58.986 57.895 0.00 0.00 0.00 3.86
1755 2649 3.886505 TGAAACCGGCAATACAAAGAACT 59.113 39.130 0.00 0.00 0.00 3.01
2394 3289 7.824779 AGTTAATCTCTTTCTTGTGTATCCCAC 59.175 37.037 0.00 0.00 44.78 4.61
2395 3290 7.918076 AGTTAATCTCTTTCTTGTGTATCCCA 58.082 34.615 0.00 0.00 0.00 4.37
2396 3291 8.794335 AAGTTAATCTCTTTCTTGTGTATCCC 57.206 34.615 0.00 0.00 0.00 3.85
2399 3294 9.793259 TCCAAAGTTAATCTCTTTCTTGTGTAT 57.207 29.630 0.00 0.00 33.58 2.29
2400 3295 9.793259 ATCCAAAGTTAATCTCTTTCTTGTGTA 57.207 29.630 0.00 0.00 33.58 2.90
2401 3296 8.571336 CATCCAAAGTTAATCTCTTTCTTGTGT 58.429 33.333 0.00 0.00 33.58 3.72
2402 3297 8.025445 CCATCCAAAGTTAATCTCTTTCTTGTG 58.975 37.037 0.00 0.00 33.58 3.33
2403 3298 7.725844 ACCATCCAAAGTTAATCTCTTTCTTGT 59.274 33.333 0.00 0.00 33.58 3.16
2404 3299 8.115490 ACCATCCAAAGTTAATCTCTTTCTTG 57.885 34.615 0.00 0.00 33.58 3.02
2405 3300 7.944554 TGACCATCCAAAGTTAATCTCTTTCTT 59.055 33.333 0.00 0.00 33.58 2.52
2406 3301 7.461749 TGACCATCCAAAGTTAATCTCTTTCT 58.538 34.615 0.00 0.00 33.58 2.52
2407 3302 7.687941 TGACCATCCAAAGTTAATCTCTTTC 57.312 36.000 0.00 0.00 33.58 2.62
2408 3303 8.655935 AATGACCATCCAAAGTTAATCTCTTT 57.344 30.769 0.00 0.00 35.82 2.52
2409 3304 8.655935 AAATGACCATCCAAAGTTAATCTCTT 57.344 30.769 0.00 0.00 0.00 2.85
2410 3305 8.526147 CAAAATGACCATCCAAAGTTAATCTCT 58.474 33.333 0.00 0.00 0.00 3.10
2411 3306 8.306761 ACAAAATGACCATCCAAAGTTAATCTC 58.693 33.333 0.00 0.00 0.00 2.75
2412 3307 8.193953 ACAAAATGACCATCCAAAGTTAATCT 57.806 30.769 0.00 0.00 0.00 2.40
2413 3308 8.831715 AACAAAATGACCATCCAAAGTTAATC 57.168 30.769 0.00 0.00 0.00 1.75
2414 3309 9.054922 CAAACAAAATGACCATCCAAAGTTAAT 57.945 29.630 0.00 0.00 0.00 1.40
2415 3310 8.260818 TCAAACAAAATGACCATCCAAAGTTAA 58.739 29.630 0.00 0.00 0.00 2.01
2416 3311 7.786030 TCAAACAAAATGACCATCCAAAGTTA 58.214 30.769 0.00 0.00 0.00 2.24
2417 3312 6.648192 TCAAACAAAATGACCATCCAAAGTT 58.352 32.000 0.00 0.00 0.00 2.66
2418 3313 6.232581 TCAAACAAAATGACCATCCAAAGT 57.767 33.333 0.00 0.00 0.00 2.66
2419 3314 7.156673 AGATCAAACAAAATGACCATCCAAAG 58.843 34.615 0.00 0.00 0.00 2.77
2420 3315 7.065120 AGATCAAACAAAATGACCATCCAAA 57.935 32.000 0.00 0.00 0.00 3.28
2421 3316 6.669125 AGATCAAACAAAATGACCATCCAA 57.331 33.333 0.00 0.00 0.00 3.53
2422 3317 6.718912 TGTAGATCAAACAAAATGACCATCCA 59.281 34.615 0.00 0.00 0.00 3.41
2423 3318 7.029563 GTGTAGATCAAACAAAATGACCATCC 58.970 38.462 2.79 0.00 0.00 3.51
2424 3319 7.592938 TGTGTAGATCAAACAAAATGACCATC 58.407 34.615 2.79 0.00 0.00 3.51
2425 3320 7.523293 TGTGTAGATCAAACAAAATGACCAT 57.477 32.000 2.79 0.00 0.00 3.55
2426 3321 6.951062 TGTGTAGATCAAACAAAATGACCA 57.049 33.333 2.79 0.00 0.00 4.02
2427 3322 7.379529 CACTTGTGTAGATCAAACAAAATGACC 59.620 37.037 4.75 0.00 33.67 4.02
2428 3323 7.379529 CCACTTGTGTAGATCAAACAAAATGAC 59.620 37.037 14.35 0.00 33.67 3.06
2429 3324 7.284261 TCCACTTGTGTAGATCAAACAAAATGA 59.716 33.333 14.35 7.05 33.67 2.57
2430 3325 7.379529 GTCCACTTGTGTAGATCAAACAAAATG 59.620 37.037 4.75 7.66 33.67 2.32
2431 3326 7.425606 GTCCACTTGTGTAGATCAAACAAAAT 58.574 34.615 4.75 0.00 33.67 1.82
2432 3327 6.183360 GGTCCACTTGTGTAGATCAAACAAAA 60.183 38.462 2.79 3.64 33.67 2.44
2433 3328 5.298276 GGTCCACTTGTGTAGATCAAACAAA 59.702 40.000 2.79 0.00 33.67 2.83
2434 3329 4.819630 GGTCCACTTGTGTAGATCAAACAA 59.180 41.667 2.79 5.37 33.06 2.83
2435 3330 4.141597 TGGTCCACTTGTGTAGATCAAACA 60.142 41.667 0.00 0.00 0.00 2.83
2436 3331 4.385825 TGGTCCACTTGTGTAGATCAAAC 58.614 43.478 0.00 0.00 0.00 2.93
2437 3332 4.698201 TGGTCCACTTGTGTAGATCAAA 57.302 40.909 0.00 0.00 0.00 2.69
2438 3333 4.041567 ACATGGTCCACTTGTGTAGATCAA 59.958 41.667 0.00 0.00 36.25 2.57
2439 3334 3.582647 ACATGGTCCACTTGTGTAGATCA 59.417 43.478 0.00 0.00 36.25 2.92
2440 3335 3.935203 CACATGGTCCACTTGTGTAGATC 59.065 47.826 14.98 0.00 45.30 2.75
2441 3336 3.942829 CACATGGTCCACTTGTGTAGAT 58.057 45.455 14.98 0.00 45.30 1.98
2442 3337 3.401033 CACATGGTCCACTTGTGTAGA 57.599 47.619 14.98 0.00 45.30 2.59
2447 3342 3.297134 AGAAACACATGGTCCACTTGT 57.703 42.857 0.00 0.00 37.91 3.16
2448 3343 4.654091 AAAGAAACACATGGTCCACTTG 57.346 40.909 0.00 0.00 0.00 3.16
2449 3344 6.068010 TCATAAAGAAACACATGGTCCACTT 58.932 36.000 0.00 0.00 0.00 3.16
2450 3345 5.630121 TCATAAAGAAACACATGGTCCACT 58.370 37.500 0.00 0.00 0.00 4.00
2451 3346 5.957842 TCATAAAGAAACACATGGTCCAC 57.042 39.130 0.00 0.00 0.00 4.02
2452 3347 6.068010 ACTTCATAAAGAAACACATGGTCCA 58.932 36.000 0.00 0.00 35.40 4.02
2453 3348 6.575162 ACTTCATAAAGAAACACATGGTCC 57.425 37.500 0.00 0.00 35.40 4.46
2454 3349 8.116753 CGATACTTCATAAAGAAACACATGGTC 58.883 37.037 0.00 0.00 35.40 4.02
2455 3350 7.822334 TCGATACTTCATAAAGAAACACATGGT 59.178 33.333 0.00 0.00 35.40 3.55
2456 3351 8.196802 TCGATACTTCATAAAGAAACACATGG 57.803 34.615 0.00 0.00 35.40 3.66
2457 3352 9.478019 GTTCGATACTTCATAAAGAAACACATG 57.522 33.333 0.00 0.00 35.40 3.21
2458 3353 9.214957 TGTTCGATACTTCATAAAGAAACACAT 57.785 29.630 0.00 0.00 35.40 3.21
2459 3354 8.596271 TGTTCGATACTTCATAAAGAAACACA 57.404 30.769 0.00 0.00 35.40 3.72
2486 3381 7.168302 CCGCGACAATATAAATTGCCATAAAAA 59.832 33.333 8.23 0.00 45.41 1.94
2487 3382 6.638873 CCGCGACAATATAAATTGCCATAAAA 59.361 34.615 8.23 0.00 45.41 1.52
2488 3383 6.146216 CCGCGACAATATAAATTGCCATAAA 58.854 36.000 8.23 0.00 45.41 1.40
2489 3384 5.335269 CCCGCGACAATATAAATTGCCATAA 60.335 40.000 8.23 0.00 45.41 1.90
2490 3385 4.155099 CCCGCGACAATATAAATTGCCATA 59.845 41.667 8.23 0.00 45.41 2.74
2491 3386 3.057596 CCCGCGACAATATAAATTGCCAT 60.058 43.478 8.23 0.00 45.41 4.40
2492 3387 2.292016 CCCGCGACAATATAAATTGCCA 59.708 45.455 8.23 0.00 45.41 4.92
2493 3388 2.292292 ACCCGCGACAATATAAATTGCC 59.708 45.455 8.23 0.00 45.41 4.52
2494 3389 3.619233 ACCCGCGACAATATAAATTGC 57.381 42.857 8.23 0.00 45.41 3.56
2502 3397 9.709495 ACTAAAATTATAATACCCGCGACAATA 57.291 29.630 8.23 0.00 0.00 1.90
2503 3398 8.611654 ACTAAAATTATAATACCCGCGACAAT 57.388 30.769 8.23 0.00 0.00 2.71
2504 3399 8.436046 AACTAAAATTATAATACCCGCGACAA 57.564 30.769 8.23 0.00 0.00 3.18
2505 3400 8.436046 AAACTAAAATTATAATACCCGCGACA 57.564 30.769 8.23 0.00 0.00 4.35
2506 3401 9.797473 GTAAACTAAAATTATAATACCCGCGAC 57.203 33.333 8.23 0.00 0.00 5.19
2507 3402 9.539825 TGTAAACTAAAATTATAATACCCGCGA 57.460 29.630 8.23 0.00 0.00 5.87
2518 3413 9.717942 TTTGCCATGCTTGTAAACTAAAATTAT 57.282 25.926 0.00 0.00 0.00 1.28
2519 3414 8.983724 GTTTGCCATGCTTGTAAACTAAAATTA 58.016 29.630 16.05 0.00 31.00 1.40
2520 3415 7.041440 GGTTTGCCATGCTTGTAAACTAAAATT 60.041 33.333 19.62 0.00 32.73 1.82
2521 3416 6.426633 GGTTTGCCATGCTTGTAAACTAAAAT 59.573 34.615 19.62 0.00 32.73 1.82
2522 3417 5.755861 GGTTTGCCATGCTTGTAAACTAAAA 59.244 36.000 19.62 2.71 32.73 1.52
2523 3418 5.293560 GGTTTGCCATGCTTGTAAACTAAA 58.706 37.500 19.62 4.22 32.73 1.85
2524 3419 4.262249 GGGTTTGCCATGCTTGTAAACTAA 60.262 41.667 19.62 2.78 36.17 2.24
2525 3420 3.257127 GGGTTTGCCATGCTTGTAAACTA 59.743 43.478 19.62 0.00 36.17 2.24
2526 3421 2.037121 GGGTTTGCCATGCTTGTAAACT 59.963 45.455 19.62 0.00 36.17 2.66
2527 3422 2.037121 AGGGTTTGCCATGCTTGTAAAC 59.963 45.455 15.46 15.46 36.17 2.01
2528 3423 2.036992 CAGGGTTTGCCATGCTTGTAAA 59.963 45.455 0.00 0.00 39.85 2.01
2529 3424 1.617850 CAGGGTTTGCCATGCTTGTAA 59.382 47.619 0.00 0.00 39.85 2.41
2530 3425 1.255882 CAGGGTTTGCCATGCTTGTA 58.744 50.000 0.00 0.00 39.85 2.41
2531 3426 1.474332 CCAGGGTTTGCCATGCTTGT 61.474 55.000 0.00 0.00 44.59 3.16
2532 3427 1.294138 CCAGGGTTTGCCATGCTTG 59.706 57.895 0.00 0.00 44.59 4.01
2533 3428 2.586293 GCCAGGGTTTGCCATGCTT 61.586 57.895 0.00 0.00 44.59 3.91
2534 3429 2.999063 GCCAGGGTTTGCCATGCT 60.999 61.111 0.00 0.00 44.59 3.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.