Multiple sequence alignment - TraesCS3D01G410300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G410300 chr3D 100.000 5444 0 0 1 5444 523702691 523708134 0.000000e+00 10054.0
1 TraesCS3D01G410300 chr3D 94.712 208 11 0 3682 3889 523706315 523706522 1.890000e-84 324.0
2 TraesCS3D01G410300 chr3D 94.712 208 11 0 3625 3832 523706372 523706579 1.890000e-84 324.0
3 TraesCS3D01G410300 chr3D 93.182 44 2 1 20 63 374036563 374036605 4.550000e-06 63.9
4 TraesCS3D01G410300 chr3B 93.252 2934 156 16 989 3889 690854686 690857610 0.000000e+00 4283.0
5 TraesCS3D01G410300 chr3B 92.072 883 51 6 3625 4499 690857403 690858274 0.000000e+00 1225.0
6 TraesCS3D01G410300 chr3B 93.269 208 14 0 3682 3889 690857346 690857553 1.900000e-79 307.0
7 TraesCS3D01G410300 chr3B 81.587 315 23 11 4525 4804 690858374 690858688 1.530000e-55 228.0
8 TraesCS3D01G410300 chr3B 96.825 63 2 0 5084 5146 690858740 690858802 7.460000e-19 106.0
9 TraesCS3D01G410300 chr3A 90.961 2113 139 28 512 2599 658650455 658652540 0.000000e+00 2796.0
10 TraesCS3D01G410300 chr3A 94.731 892 35 4 2664 3550 658652529 658653413 0.000000e+00 1376.0
11 TraesCS3D01G410300 chr3A 94.713 889 41 6 3625 4510 658653692 658654577 0.000000e+00 1376.0
12 TraesCS3D01G410300 chr3A 87.671 511 39 10 1 491 658649959 658650465 1.700000e-159 573.0
13 TraesCS3D01G410300 chr3A 95.058 344 14 1 3549 3889 658653499 658653842 6.200000e-149 538.0
14 TraesCS3D01G410300 chr3A 96.604 265 9 0 3625 3889 658653635 658653899 1.800000e-119 440.0
15 TraesCS3D01G410300 chr3A 92.308 208 16 0 3682 3889 658653578 658653785 4.120000e-76 296.0
16 TraesCS3D01G410300 chr3A 82.278 237 20 13 4713 4929 658654769 658655003 9.310000e-43 185.0
17 TraesCS3D01G410300 chr3A 94.565 92 5 0 3627 3718 658653865 658653956 5.680000e-30 143.0
18 TraesCS3D01G410300 chr7B 89.946 368 33 4 1500 1864 614496289 614496655 6.380000e-129 472.0
19 TraesCS3D01G410300 chr7B 89.674 368 34 4 1500 1864 614553752 614554118 2.970000e-127 466.0
20 TraesCS3D01G410300 chr7B 93.893 131 7 1 1139 1269 614496160 614496289 4.300000e-46 196.0
21 TraesCS3D01G410300 chr7B 93.130 131 8 1 1139 1269 614553623 614553752 2.000000e-44 191.0
22 TraesCS3D01G410300 chr7B 77.567 263 30 11 229 470 68560372 68560626 1.230000e-26 132.0
23 TraesCS3D01G410300 chrUn 89.402 368 35 4 1500 1864 67445851 67445485 1.380000e-125 460.0
24 TraesCS3D01G410300 chrUn 89.402 368 35 4 1500 1864 337804955 337805321 1.380000e-125 460.0
25 TraesCS3D01G410300 chrUn 93.130 131 8 1 1139 1269 67445980 67445851 2.000000e-44 191.0
26 TraesCS3D01G410300 chrUn 93.130 131 8 1 1139 1269 337804826 337804955 2.000000e-44 191.0
27 TraesCS3D01G410300 chr2A 81.690 213 27 5 239 448 751668185 751667982 3.370000e-37 167.0
28 TraesCS3D01G410300 chr1B 93.182 88 6 0 391 478 633289450 633289363 4.430000e-26 130.0
29 TraesCS3D01G410300 chr1B 100.000 31 0 0 84 114 405713434 405713464 2.120000e-04 58.4
30 TraesCS3D01G410300 chr7D 93.333 75 4 1 396 470 109438850 109438923 5.770000e-20 110.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G410300 chr3D 523702691 523708134 5443 False 3567.333333 10054 96.474667 1 5444 3 chr3D.!!$F2 5443
1 TraesCS3D01G410300 chr3B 690854686 690858802 4116 False 1229.800000 4283 91.401000 989 5146 5 chr3B.!!$F1 4157
2 TraesCS3D01G410300 chr3A 658649959 658655003 5044 False 858.111111 2796 92.098778 1 4929 9 chr3A.!!$F1 4928

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
295 315 0.104671 GCATGCCTCTCTCTCAGTCC 59.895 60.000 6.36 0.0 0.00 3.85 F
506 526 0.249657 GCATGTTGGTTTCGCCCAAA 60.250 50.000 0.00 0.0 45.72 3.28 F
647 667 0.250338 GCGGATAGGGTTGGATGACC 60.250 60.000 0.00 0.0 39.04 4.02 F
2110 2183 0.322975 GACTGGCAAGGCAGAAGAGA 59.677 55.000 27.45 0.0 0.00 3.10 F
2793 2870 1.228184 CCTGCTGATGCTCCATCCC 60.228 63.158 3.03 0.0 39.87 3.85 F
3520 3598 0.534203 ACACCAACTACGGGCAACAG 60.534 55.000 0.00 0.0 39.74 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1521 1578 0.109597 CAGGAAACCACAATGCGCTC 60.110 55.0 9.73 0.0 0.00 5.03 R
2210 2283 0.312102 GTGCAACAGCTCAAACTCCC 59.688 55.0 0.00 0.0 36.32 4.30 R
2637 2710 2.798145 GCAAAGAGGGAAAACCACAACG 60.798 50.0 0.00 0.0 43.89 4.10 R
3278 3356 0.379669 GCCATCACTGGAATTCTGCG 59.620 55.0 5.23 0.0 46.37 5.18 R
4282 4630 0.321298 GCACACCAACACCGGTCTAT 60.321 55.0 2.59 0.0 37.07 1.98 R
4973 5497 0.036765 AAGTCATGGCGTCCGCTTAA 60.037 50.0 11.82 0.0 41.60 1.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.585162 CCGGGTAAGTCTGAATGATAGAGT 59.415 45.833 0.00 0.00 0.00 3.24
32 33 8.177119 AGTCTGAATGATAGAGTTTAGCCTAG 57.823 38.462 0.00 0.00 0.00 3.02
35 36 5.602561 TGAATGATAGAGTTTAGCCTAGCCA 59.397 40.000 0.00 0.00 0.00 4.75
40 41 6.265649 TGATAGAGTTTAGCCTAGCCACTTAG 59.734 42.308 0.00 0.00 0.00 2.18
110 112 2.722201 ATCTCCAACGCCGACCCTC 61.722 63.158 0.00 0.00 0.00 4.30
111 113 3.691342 CTCCAACGCCGACCCTCA 61.691 66.667 0.00 0.00 0.00 3.86
120 122 3.053896 CGACCCTCAAAACCGCCC 61.054 66.667 0.00 0.00 0.00 6.13
127 129 1.588674 CTCAAAACCGCCCGCATATA 58.411 50.000 0.00 0.00 0.00 0.86
129 131 1.876799 TCAAAACCGCCCGCATATATG 59.123 47.619 8.45 8.45 0.00 1.78
162 164 2.052104 CGGACCCCAAAAGCCATCC 61.052 63.158 0.00 0.00 0.00 3.51
179 181 3.275143 CATCCAACACGGGCTTGTATTA 58.725 45.455 0.00 0.00 34.36 0.98
184 186 2.557317 ACACGGGCTTGTATTAATCCG 58.443 47.619 8.91 8.91 42.69 4.18
212 214 2.940561 CGGACCACGTTTTTCCCG 59.059 61.111 0.00 0.00 37.93 5.14
213 215 1.594836 CGGACCACGTTTTTCCCGA 60.595 57.895 0.00 0.00 39.31 5.14
215 217 0.308684 GGACCACGTTTTTCCCGAAC 59.691 55.000 0.00 0.00 0.00 3.95
216 218 0.308684 GACCACGTTTTTCCCGAACC 59.691 55.000 0.00 0.00 0.00 3.62
217 219 0.394080 ACCACGTTTTTCCCGAACCA 60.394 50.000 0.00 0.00 0.00 3.67
218 220 0.739561 CCACGTTTTTCCCGAACCAA 59.260 50.000 0.00 0.00 0.00 3.67
219 221 1.134560 CCACGTTTTTCCCGAACCAAA 59.865 47.619 0.00 0.00 0.00 3.28
220 222 2.186891 CACGTTTTTCCCGAACCAAAC 58.813 47.619 0.00 0.00 0.00 2.93
221 223 1.468895 CGTTTTTCCCGAACCAAACG 58.531 50.000 10.85 10.85 43.74 3.60
259 279 2.105128 GTCCGCTCATCCGTCTGG 59.895 66.667 0.00 0.00 0.00 3.86
295 315 0.104671 GCATGCCTCTCTCTCAGTCC 59.895 60.000 6.36 0.00 0.00 3.85
302 322 1.066908 CTCTCTCTCAGTCCGAATGGC 59.933 57.143 0.00 0.00 34.14 4.40
329 349 4.369167 GCCGTTGCTAATTTTGTTTGTC 57.631 40.909 0.00 0.00 33.53 3.18
332 352 4.085107 CCGTTGCTAATTTTGTTTGTCTGC 60.085 41.667 0.00 0.00 0.00 4.26
355 375 3.256558 GAAAGATGAAGGCAAACATGGC 58.743 45.455 0.00 0.00 0.00 4.40
358 378 0.611618 ATGAAGGCAAACATGGCGGA 60.612 50.000 0.00 0.00 39.53 5.54
360 380 0.532115 GAAGGCAAACATGGCGGAAT 59.468 50.000 0.00 0.00 39.53 3.01
368 388 1.909700 ACATGGCGGAATGTCAAGTT 58.090 45.000 0.00 0.00 35.92 2.66
369 389 1.812571 ACATGGCGGAATGTCAAGTTC 59.187 47.619 0.00 0.00 35.92 3.01
379 399 1.686355 TGTCAAGTTCCGCCAAACAT 58.314 45.000 0.00 0.00 0.00 2.71
386 406 1.269448 GTTCCGCCAAACATGTGTGAT 59.731 47.619 18.04 0.00 0.00 3.06
389 409 2.682352 TCCGCCAAACATGTGTGATATG 59.318 45.455 18.04 1.59 0.00 1.78
390 410 2.453080 CGCCAAACATGTGTGATATGC 58.547 47.619 18.04 10.85 0.00 3.14
391 411 2.159407 CGCCAAACATGTGTGATATGCA 60.159 45.455 18.04 0.00 0.00 3.96
489 509 8.902540 TTTTCTTCAAGTGATTTAGACTAGCA 57.097 30.769 0.00 0.00 0.00 3.49
490 510 9.507329 TTTTCTTCAAGTGATTTAGACTAGCAT 57.493 29.630 0.00 0.00 0.00 3.79
491 511 8.484641 TTCTTCAAGTGATTTAGACTAGCATG 57.515 34.615 0.00 0.00 0.00 4.06
492 512 7.615403 TCTTCAAGTGATTTAGACTAGCATGT 58.385 34.615 0.00 0.00 0.00 3.21
494 514 7.601073 TCAAGTGATTTAGACTAGCATGTTG 57.399 36.000 0.00 0.00 0.00 3.33
495 515 6.595326 TCAAGTGATTTAGACTAGCATGTTGG 59.405 38.462 0.00 0.00 0.00 3.77
496 516 6.054860 AGTGATTTAGACTAGCATGTTGGT 57.945 37.500 0.00 0.00 0.00 3.67
497 517 6.476378 AGTGATTTAGACTAGCATGTTGGTT 58.524 36.000 0.00 0.00 0.00 3.67
498 518 6.942576 AGTGATTTAGACTAGCATGTTGGTTT 59.057 34.615 0.00 0.00 0.00 3.27
501 521 2.076863 AGACTAGCATGTTGGTTTCGC 58.923 47.619 0.00 0.00 0.00 4.70
502 522 1.130561 GACTAGCATGTTGGTTTCGCC 59.869 52.381 0.00 0.00 37.90 5.54
503 523 0.451783 CTAGCATGTTGGTTTCGCCC 59.548 55.000 0.00 0.00 36.04 6.13
504 524 0.250945 TAGCATGTTGGTTTCGCCCA 60.251 50.000 0.00 0.00 36.04 5.36
505 525 1.112315 AGCATGTTGGTTTCGCCCAA 61.112 50.000 0.00 0.00 42.16 4.12
506 526 0.249657 GCATGTTGGTTTCGCCCAAA 60.250 50.000 0.00 0.00 45.72 3.28
507 527 1.808133 GCATGTTGGTTTCGCCCAAAA 60.808 47.619 0.00 0.00 45.72 2.44
508 528 2.555199 CATGTTGGTTTCGCCCAAAAA 58.445 42.857 3.10 0.00 45.72 1.94
527 547 4.766404 AAAACAGTACTAGCATGTTGGC 57.234 40.909 0.00 0.00 37.24 4.52
528 548 2.403252 ACAGTACTAGCATGTTGGCC 57.597 50.000 0.00 0.00 0.00 5.36
539 559 2.664916 CATGTTGGCCGAAAGTGAAAG 58.335 47.619 0.00 0.00 0.00 2.62
540 560 1.028905 TGTTGGCCGAAAGTGAAAGG 58.971 50.000 0.00 0.00 0.00 3.11
551 571 5.447818 CCGAAAGTGAAAGGCATGACTATTC 60.448 44.000 0.00 8.93 0.00 1.75
556 576 4.943705 GTGAAAGGCATGACTATTCAGGAA 59.056 41.667 19.97 3.14 35.43 3.36
565 585 2.431057 GACTATTCAGGAAGGCGGAAGA 59.569 50.000 0.00 0.00 0.00 2.87
569 589 1.275666 TCAGGAAGGCGGAAGATTCA 58.724 50.000 0.00 0.00 32.11 2.57
576 596 3.071874 AGGCGGAAGATTCACATTTCA 57.928 42.857 0.00 0.00 0.00 2.69
595 615 8.814235 ACATTTCATGCTTATTAGTACGTACAC 58.186 33.333 26.55 4.23 0.00 2.90
601 621 4.035675 GCTTATTAGTACGTACACTCCGGT 59.964 45.833 26.55 7.49 0.00 5.28
619 639 7.063544 CACTCCGGTTTGTTCAAATTTGTTTTA 59.936 33.333 17.47 0.00 0.00 1.52
623 643 8.841822 CCGGTTTGTTCAAATTTGTTTTAAAAC 58.158 29.630 21.66 21.66 39.33 2.43
624 644 9.382244 CGGTTTGTTCAAATTTGTTTTAAAACA 57.618 25.926 26.05 26.05 46.35 2.83
640 660 2.332063 AACAGATGCGGATAGGGTTG 57.668 50.000 0.00 0.00 0.00 3.77
645 665 1.347707 GATGCGGATAGGGTTGGATGA 59.652 52.381 0.00 0.00 0.00 2.92
647 667 0.250338 GCGGATAGGGTTGGATGACC 60.250 60.000 0.00 0.00 39.04 4.02
649 669 1.420430 GGATAGGGTTGGATGACCGA 58.580 55.000 0.00 0.00 40.75 4.69
653 673 1.221021 GGGTTGGATGACCGACTCC 59.779 63.158 0.00 0.00 46.77 3.85
654 674 1.221021 GGTTGGATGACCGACTCCC 59.779 63.158 0.00 0.00 46.77 4.30
655 675 1.153628 GTTGGATGACCGACTCCCG 60.154 63.158 0.00 0.00 44.81 5.14
659 679 1.038280 GGATGACCGACTCCCGTATT 58.962 55.000 0.00 0.00 36.31 1.89
664 684 4.090761 TGACCGACTCCCGTATTAGTAT 57.909 45.455 0.00 0.00 36.31 2.12
670 690 3.416156 ACTCCCGTATTAGTATCCGGAC 58.584 50.000 6.12 0.00 43.01 4.79
672 692 4.015084 CTCCCGTATTAGTATCCGGACAT 58.985 47.826 6.12 0.00 43.01 3.06
674 694 3.760151 CCCGTATTAGTATCCGGACATCA 59.240 47.826 6.12 0.00 43.01 3.07
675 695 4.142447 CCCGTATTAGTATCCGGACATCAG 60.142 50.000 6.12 0.00 43.01 2.90
676 696 4.458295 CCGTATTAGTATCCGGACATCAGT 59.542 45.833 6.12 0.00 43.01 3.41
677 697 5.048224 CCGTATTAGTATCCGGACATCAGTT 60.048 44.000 6.12 0.00 43.01 3.16
678 698 5.856986 CGTATTAGTATCCGGACATCAGTTG 59.143 44.000 6.12 0.00 0.00 3.16
683 703 2.178912 TCCGGACATCAGTTGAAACC 57.821 50.000 0.00 0.00 0.00 3.27
692 712 4.513692 ACATCAGTTGAAACCGATTTTCGA 59.486 37.500 0.00 1.47 45.96 3.71
700 720 7.377662 AGTTGAAACCGATTTTCGAACAAATAC 59.622 33.333 0.00 0.00 45.96 1.89
701 721 5.846994 TGAAACCGATTTTCGAACAAATACG 59.153 36.000 0.00 2.96 45.96 3.06
702 722 3.739494 ACCGATTTTCGAACAAATACGC 58.261 40.909 0.00 0.00 43.74 4.42
706 726 6.183360 ACCGATTTTCGAACAAATACGCTATT 60.183 34.615 0.00 0.00 43.74 1.73
738 769 4.262506 GGTATGCCCTAGTGGTACATCTTC 60.263 50.000 0.00 0.00 44.52 2.87
742 773 3.782046 CCCTAGTGGTACATCTTCAACG 58.218 50.000 0.00 0.00 44.52 4.10
773 804 2.550830 ACTGCTTGAAATGAGTCGGT 57.449 45.000 0.00 0.00 0.00 4.69
843 874 7.852971 ATAATCGACGAATAGGTTGGAAAAA 57.147 32.000 0.00 0.00 0.00 1.94
852 883 5.871324 ATAGGTTGGAAAAACTCCCCTAA 57.129 39.130 0.00 0.00 44.69 2.69
884 915 9.547279 AGAATAGGTTGGAAAAATACCTTCAAT 57.453 29.630 0.00 0.00 42.18 2.57
920 951 1.019278 GCCAAGGCGATCGAAACTCA 61.019 55.000 21.57 0.00 0.00 3.41
1028 1059 0.661020 CGGCCGTTCCATTCCATAAC 59.339 55.000 19.50 0.00 34.01 1.89
1040 1071 1.227556 CCATAACCCCGAGGAAGCG 60.228 63.158 0.00 0.00 36.73 4.68
1108 1151 2.058595 TCTCCGCCAGAACCCTAGC 61.059 63.158 0.00 0.00 0.00 3.42
1193 1236 2.813908 CGCTTCTGGGGTGCGTAC 60.814 66.667 0.00 0.00 44.00 3.67
1206 1249 2.132352 GCGTACCCTCTCCCCGAAT 61.132 63.158 0.00 0.00 0.00 3.34
1212 1255 2.040884 CTCTCCCCGAATCCCCCA 60.041 66.667 0.00 0.00 0.00 4.96
1230 1283 0.463654 CAATTTCGCCCCCGATCTGA 60.464 55.000 0.00 0.00 43.97 3.27
1243 1296 3.490793 ATCTGATCGCGCGGTCCAG 62.491 63.158 37.37 31.84 0.00 3.86
1331 1384 2.741092 GGTTCCGTCCAGCAGTCA 59.259 61.111 0.00 0.00 0.00 3.41
1335 1388 2.997315 CCGTCCAGCAGTCAGGGA 60.997 66.667 0.00 0.00 0.00 4.20
1355 1408 2.017559 ATCTACGCGGCCTGTTCCTC 62.018 60.000 12.47 0.00 0.00 3.71
1370 1423 2.134933 CCTCCCTAGGGTTCCTCGC 61.135 68.421 27.58 0.00 39.48 5.03
1496 1553 1.337118 CCTGATCTAGGGAGAGTGGC 58.663 60.000 0.00 0.00 43.33 5.01
1498 1555 1.109920 TGATCTAGGGAGAGTGGCGC 61.110 60.000 0.00 0.00 34.35 6.53
1501 1558 4.753662 TAGGGAGAGTGGCGCGGT 62.754 66.667 8.83 0.00 0.00 5.68
1505 1562 1.591863 GGAGAGTGGCGCGGTTATC 60.592 63.158 8.83 0.00 0.00 1.75
1521 1578 4.500545 CGGTTATCCTGTCTTGATCTGGAG 60.501 50.000 0.00 0.00 36.62 3.86
1522 1579 4.651503 GGTTATCCTGTCTTGATCTGGAGA 59.348 45.833 0.00 0.00 36.62 3.71
1524 1581 2.106566 TCCTGTCTTGATCTGGAGAGC 58.893 52.381 0.00 0.00 0.00 4.09
1562 1619 1.074951 GTTGTTCCTGGGTCTGGGG 59.925 63.158 0.00 0.00 0.00 4.96
1609 1666 5.792188 TCATGGATATCTGGTTGGATGGTAT 59.208 40.000 2.05 0.00 0.00 2.73
1610 1667 6.275381 TCATGGATATCTGGTTGGATGGTATT 59.725 38.462 2.05 0.00 0.00 1.89
1611 1668 7.460722 TCATGGATATCTGGTTGGATGGTATTA 59.539 37.037 2.05 0.00 0.00 0.98
1612 1669 7.257790 TGGATATCTGGTTGGATGGTATTAG 57.742 40.000 2.05 0.00 0.00 1.73
1613 1670 6.792473 TGGATATCTGGTTGGATGGTATTAGT 59.208 38.462 2.05 0.00 0.00 2.24
1614 1671 7.294720 TGGATATCTGGTTGGATGGTATTAGTT 59.705 37.037 2.05 0.00 0.00 2.24
1615 1672 7.824779 GGATATCTGGTTGGATGGTATTAGTTC 59.175 40.741 2.05 0.00 0.00 3.01
1616 1673 5.367945 TCTGGTTGGATGGTATTAGTTCC 57.632 43.478 0.00 0.00 0.00 3.62
1617 1674 5.036916 TCTGGTTGGATGGTATTAGTTCCT 58.963 41.667 0.00 0.00 0.00 3.36
1618 1675 5.491078 TCTGGTTGGATGGTATTAGTTCCTT 59.509 40.000 0.00 0.00 0.00 3.36
1619 1676 5.751586 TGGTTGGATGGTATTAGTTCCTTC 58.248 41.667 0.00 0.00 0.00 3.46
1620 1677 5.491078 TGGTTGGATGGTATTAGTTCCTTCT 59.509 40.000 0.00 0.00 0.00 2.85
1648 1717 7.620880 ACTTTCAGCAGTCATAACCTACATAA 58.379 34.615 0.00 0.00 0.00 1.90
1677 1746 4.868171 TGTTGTCAGCTTCGGTATATGTTC 59.132 41.667 0.00 0.00 0.00 3.18
1730 1799 3.119849 GCATGCTCTGGTAATTGTTCGTT 60.120 43.478 11.37 0.00 0.00 3.85
1766 1835 6.245115 TGCATTGTTTCTGTTCTGTATGAG 57.755 37.500 0.00 0.00 0.00 2.90
1767 1836 5.091431 GCATTGTTTCTGTTCTGTATGAGC 58.909 41.667 0.00 0.00 0.00 4.26
1853 1922 4.559153 AGCAACAGATATTTGTGTTTGCC 58.441 39.130 14.59 2.29 37.24 4.52
1864 1933 3.123157 TGTGTTTGCCAATTTCCCATG 57.877 42.857 0.00 0.00 0.00 3.66
1889 1960 9.727859 TGTTTGTTAAATGACTAATGGCTACTA 57.272 29.630 0.00 0.00 0.00 1.82
1988 2061 2.781101 CACATTTCGACGGTGTGTTTTG 59.219 45.455 15.83 0.00 38.66 2.44
1989 2062 2.420722 ACATTTCGACGGTGTGTTTTGT 59.579 40.909 0.00 0.00 0.00 2.83
2060 2133 6.354130 AGTTTGCTTACTCTTCAGGTGTTTA 58.646 36.000 0.00 0.00 0.00 2.01
2092 2165 6.320418 TCGTTTACTACAGATAGCATTGGAGA 59.680 38.462 0.00 0.00 30.75 3.71
2110 2183 0.322975 GACTGGCAAGGCAGAAGAGA 59.677 55.000 27.45 0.00 0.00 3.10
2127 2200 4.214980 AGAGAATGTGCAAGTTTTCGTG 57.785 40.909 0.00 0.00 0.00 4.35
2210 2283 5.947228 TTAGCTGATCTGGTGTTCAAAAG 57.053 39.130 13.87 0.00 0.00 2.27
2366 2439 7.148306 TGTGTTCTTTAACTGTTTTCCTGTCTC 60.148 37.037 0.00 0.00 36.51 3.36
2479 2552 9.448438 TGATAACATGGCATAACTTCCATATAC 57.552 33.333 0.00 0.00 40.88 1.47
2596 2669 8.281212 ACAGTTGTTGTTTAAGAGTTCAGAAT 57.719 30.769 0.00 0.00 36.31 2.40
2621 2694 4.271661 TGTATCTGCTTCATGGATTTGCA 58.728 39.130 0.00 0.00 0.00 4.08
2637 2710 8.263940 TGGATTTGCATGTCTAGTAAGTTTAC 57.736 34.615 0.00 0.00 0.00 2.01
2644 2717 6.400727 GCATGTCTAGTAAGTTTACGTTGTGG 60.401 42.308 0.00 0.00 38.65 4.17
2651 2724 4.374843 AAGTTTACGTTGTGGTTTTCCC 57.625 40.909 0.00 0.00 39.73 3.97
2654 2727 3.564053 TTACGTTGTGGTTTTCCCTCT 57.436 42.857 0.00 0.00 39.73 3.69
2658 2731 2.798145 CGTTGTGGTTTTCCCTCTTTGC 60.798 50.000 0.00 0.00 39.73 3.68
2683 2756 7.147312 CCTTTGTTCTAGAATGAAAACATGCA 58.853 34.615 8.75 0.00 32.16 3.96
2710 2784 2.037511 ACCCTTGGCATGTTTGACATTG 59.962 45.455 0.00 0.00 41.66 2.82
2767 2844 6.380846 ACACATGGTGCCAATAATCTTATTGT 59.619 34.615 17.17 0.65 41.06 2.71
2793 2870 1.228184 CCTGCTGATGCTCCATCCC 60.228 63.158 3.03 0.00 39.87 3.85
2816 2893 6.184789 CCCTATACCAAAGGCTAAAGTTGAA 58.815 40.000 0.00 0.00 32.34 2.69
2839 2916 3.127030 GGAACAAATAGTCCTGGAAAGCG 59.873 47.826 0.00 0.00 0.00 4.68
2886 2963 9.434559 GTATCTTTGTTAAGAATAATCAACCGC 57.565 33.333 0.00 0.00 43.32 5.68
2948 3025 4.067896 TCTTGCTCTTGTTGTTCTGGATC 58.932 43.478 0.00 0.00 0.00 3.36
3039 3116 4.641989 GGAGTATGCATCCATTTTGACAGT 59.358 41.667 0.19 0.00 36.79 3.55
3044 3121 6.790285 ATGCATCCATTTTGACAGTTTTTC 57.210 33.333 0.00 0.00 0.00 2.29
3170 3247 1.285962 AGGTTGTAGCAGCCCAATCAT 59.714 47.619 8.07 0.00 35.27 2.45
3184 3261 3.973973 CCCAATCATTGTCCTAGGGAGTA 59.026 47.826 9.46 0.00 36.96 2.59
3185 3262 4.599241 CCCAATCATTGTCCTAGGGAGTAT 59.401 45.833 9.46 0.00 36.96 2.12
3278 3356 3.617263 CGTTTGCAGGATAAGACTGGTAC 59.383 47.826 0.00 0.00 36.48 3.34
3391 3469 7.894708 TGTTATTTTGATGCCTTCTCATTTCA 58.105 30.769 0.00 0.00 0.00 2.69
3426 3504 7.754924 TGAAACTCTTTCTGTTTTGACATGTTC 59.245 33.333 0.00 0.00 40.32 3.18
3430 3508 7.121168 ACTCTTTCTGTTTTGACATGTTCAGAA 59.879 33.333 18.14 18.14 39.20 3.02
3440 3518 6.713762 TGACATGTTCAGAAAACAAAGGAT 57.286 33.333 0.00 0.00 33.42 3.24
3520 3598 0.534203 ACACCAACTACGGGCAACAG 60.534 55.000 0.00 0.00 39.74 3.16
3745 3970 1.661463 AGTCAGGTGACCATGTCCAT 58.339 50.000 3.63 0.00 45.85 3.41
4038 4385 2.094700 TGTATCCTCGCTGACACACTTC 60.095 50.000 0.00 0.00 0.00 3.01
4165 4512 1.192428 CGAGGTGTTAGCTTAGGGGT 58.808 55.000 0.00 0.00 0.00 4.95
4199 4546 1.226746 GAATTTGGGTATCCGAGGCG 58.773 55.000 0.00 0.00 35.24 5.52
4282 4630 4.340097 TGTTCTCTCTCTTTGACACCGTTA 59.660 41.667 0.00 0.00 0.00 3.18
4330 4678 6.292865 GCTATGCTACGAAATGCTGTTGATTA 60.293 38.462 0.00 0.00 0.00 1.75
4377 4725 6.097554 TGGTTAATTATTATGGTTGGGTGCTG 59.902 38.462 0.00 0.00 0.00 4.41
4420 4768 4.800993 TCTTTTGTGCCGTATGTGTTTTTG 59.199 37.500 0.00 0.00 0.00 2.44
4478 4826 4.023291 AGAAGGGTCTGCAAAAGAAACAA 58.977 39.130 0.00 0.00 36.40 2.83
4499 4858 9.436957 AAACAATATACAGAGTAAACACCTCAG 57.563 33.333 0.00 0.00 0.00 3.35
4500 4859 7.556844 ACAATATACAGAGTAAACACCTCAGG 58.443 38.462 0.00 0.00 0.00 3.86
4501 4860 7.180408 ACAATATACAGAGTAAACACCTCAGGT 59.820 37.037 0.00 0.00 35.62 4.00
4526 4968 4.713553 TGTAAATGGACTTTGAGCTGACA 58.286 39.130 0.00 0.00 0.00 3.58
4550 5021 2.225091 ACATTCTGTGCATTCCCCTTCA 60.225 45.455 0.00 0.00 0.00 3.02
4559 5030 0.773644 ATTCCCCTTCATAGCGGCAT 59.226 50.000 1.45 0.00 0.00 4.40
4573 5044 0.949397 CGGCATGGAAGATCACATGG 59.051 55.000 19.84 6.91 43.50 3.66
4593 5064 3.243873 TGGCACTGAGACTCAAGTACTTG 60.244 47.826 26.60 26.60 41.71 3.16
4658 5142 3.006217 GCAGCAAAGGTCTGGATTTTTCT 59.994 43.478 0.00 0.00 32.41 2.52
4663 5147 5.654497 CAAAGGTCTGGATTTTTCTATGGC 58.346 41.667 0.00 0.00 0.00 4.40
4670 5154 2.463876 GATTTTTCTATGGCGCCTTGC 58.536 47.619 29.70 0.05 45.38 4.01
4685 5169 2.537792 CTTGCCCATGACAGCTTGCG 62.538 60.000 0.00 0.00 0.00 4.85
4689 5173 2.743752 CCATGACAGCTTGCGGACG 61.744 63.158 0.00 0.00 0.00 4.79
4700 5184 0.882484 TTGCGGACGCTGATGAACAA 60.882 50.000 18.04 0.00 42.51 2.83
4701 5185 1.132640 GCGGACGCTGATGAACAAC 59.867 57.895 9.76 0.00 38.26 3.32
4706 5190 2.668457 GGACGCTGATGAACAACACTAG 59.332 50.000 0.00 0.00 0.00 2.57
4707 5191 3.575630 GACGCTGATGAACAACACTAGA 58.424 45.455 0.00 0.00 0.00 2.43
4708 5192 3.987868 GACGCTGATGAACAACACTAGAA 59.012 43.478 0.00 0.00 0.00 2.10
4709 5193 3.741344 ACGCTGATGAACAACACTAGAAC 59.259 43.478 0.00 0.00 0.00 3.01
4711 5195 4.319177 GCTGATGAACAACACTAGAACCT 58.681 43.478 0.00 0.00 0.00 3.50
4717 5201 2.972348 ACAACACTAGAACCTGGAGGA 58.028 47.619 0.00 0.00 38.94 3.71
4747 5253 1.815003 GATCCTGCTGAACCAACCTTG 59.185 52.381 0.00 0.00 0.00 3.61
4812 5318 1.682684 CTCAGCGTCAGGTAGGGGT 60.683 63.158 0.00 0.00 0.00 4.95
4813 5319 0.395311 CTCAGCGTCAGGTAGGGGTA 60.395 60.000 0.00 0.00 0.00 3.69
4814 5320 0.682209 TCAGCGTCAGGTAGGGGTAC 60.682 60.000 0.00 0.00 0.00 3.34
4815 5321 0.683504 CAGCGTCAGGTAGGGGTACT 60.684 60.000 0.00 0.00 0.00 2.73
4816 5322 0.395448 AGCGTCAGGTAGGGGTACTC 60.395 60.000 0.00 0.00 0.00 2.59
4817 5323 0.395448 GCGTCAGGTAGGGGTACTCT 60.395 60.000 0.00 0.00 0.00 3.24
4819 5325 1.749634 CGTCAGGTAGGGGTACTCTTG 59.250 57.143 0.00 0.00 0.00 3.02
4820 5326 2.817665 GTCAGGTAGGGGTACTCTTGT 58.182 52.381 0.00 0.00 0.00 3.16
4821 5327 2.496470 GTCAGGTAGGGGTACTCTTGTG 59.504 54.545 0.00 0.00 0.00 3.33
4826 5340 3.056035 GGTAGGGGTACTCTTGTGTGAAG 60.056 52.174 0.00 0.00 0.00 3.02
4828 5342 1.697982 GGGGTACTCTTGTGTGAAGGT 59.302 52.381 0.00 0.00 0.00 3.50
4831 5345 2.059541 GTACTCTTGTGTGAAGGTCGC 58.940 52.381 0.00 0.00 0.00 5.19
4847 5361 2.234187 GTCGCGAAACAAGATCAAAGC 58.766 47.619 12.06 0.00 0.00 3.51
4848 5362 1.870402 TCGCGAAACAAGATCAAAGCA 59.130 42.857 6.20 0.00 0.00 3.91
4849 5363 2.483877 TCGCGAAACAAGATCAAAGCAT 59.516 40.909 6.20 0.00 0.00 3.79
4859 5374 3.543665 AGATCAAAGCATGAGAGAAGGC 58.456 45.455 0.00 0.00 42.53 4.35
4863 5378 3.267860 GCATGAGAGAAGGCGCGG 61.268 66.667 8.83 0.00 0.00 6.46
4864 5379 2.587194 CATGAGAGAAGGCGCGGG 60.587 66.667 8.83 0.00 0.00 6.13
4865 5380 3.077556 ATGAGAGAAGGCGCGGGT 61.078 61.111 8.83 0.00 0.00 5.28
4866 5381 2.660064 ATGAGAGAAGGCGCGGGTT 61.660 57.895 8.83 0.00 0.00 4.11
4867 5382 2.047179 GAGAGAAGGCGCGGGTTT 60.047 61.111 8.83 0.00 0.00 3.27
4868 5383 2.358737 AGAGAAGGCGCGGGTTTG 60.359 61.111 8.83 0.00 0.00 2.93
4870 5385 4.643387 AGAAGGCGCGGGTTTGCT 62.643 61.111 8.83 0.00 0.00 3.91
4871 5386 3.670377 GAAGGCGCGGGTTTGCTT 61.670 61.111 8.83 0.00 0.00 3.91
4902 5426 2.438021 ACCAAGCACCTGACAGAGTTTA 59.562 45.455 3.32 0.00 0.00 2.01
4906 5430 1.623811 GCACCTGACAGAGTTTAGGGA 59.376 52.381 3.32 0.00 34.60 4.20
4908 5432 3.866449 GCACCTGACAGAGTTTAGGGAAG 60.866 52.174 3.32 0.00 34.60 3.46
4909 5433 3.578716 CACCTGACAGAGTTTAGGGAAGA 59.421 47.826 3.32 0.00 34.60 2.87
4912 5436 4.998033 CCTGACAGAGTTTAGGGAAGAAAC 59.002 45.833 3.32 0.00 37.11 2.78
4913 5437 4.628074 TGACAGAGTTTAGGGAAGAAACG 58.372 43.478 0.00 0.00 40.88 3.60
4914 5438 4.342951 TGACAGAGTTTAGGGAAGAAACGA 59.657 41.667 0.00 0.00 40.88 3.85
4916 5440 5.298347 ACAGAGTTTAGGGAAGAAACGAAG 58.702 41.667 0.00 0.00 40.88 3.79
4918 5442 5.405873 CAGAGTTTAGGGAAGAAACGAAGTC 59.594 44.000 0.00 0.00 45.00 3.01
4920 5444 6.492772 AGAGTTTAGGGAAGAAACGAAGTCTA 59.507 38.462 0.00 0.00 45.00 2.59
4921 5445 7.015001 AGAGTTTAGGGAAGAAACGAAGTCTAA 59.985 37.037 0.00 0.00 45.00 2.10
4922 5446 6.927936 AGTTTAGGGAAGAAACGAAGTCTAAC 59.072 38.462 0.00 0.00 45.00 2.34
4925 5449 5.866207 AGGGAAGAAACGAAGTCTAACAAT 58.134 37.500 0.00 0.00 45.00 2.71
4926 5450 5.932883 AGGGAAGAAACGAAGTCTAACAATC 59.067 40.000 0.00 0.00 45.00 2.67
4927 5451 5.699458 GGGAAGAAACGAAGTCTAACAATCA 59.301 40.000 0.00 0.00 45.00 2.57
4928 5452 6.128526 GGGAAGAAACGAAGTCTAACAATCAG 60.129 42.308 0.00 0.00 45.00 2.90
4929 5453 5.847670 AGAAACGAAGTCTAACAATCAGC 57.152 39.130 0.00 0.00 45.00 4.26
4930 5454 5.542779 AGAAACGAAGTCTAACAATCAGCT 58.457 37.500 0.00 0.00 45.00 4.24
4931 5455 5.992217 AGAAACGAAGTCTAACAATCAGCTT 59.008 36.000 0.00 0.00 45.00 3.74
4932 5456 7.152645 AGAAACGAAGTCTAACAATCAGCTTA 58.847 34.615 0.00 0.00 45.00 3.09
4933 5457 7.819900 AGAAACGAAGTCTAACAATCAGCTTAT 59.180 33.333 0.00 0.00 45.00 1.73
4934 5458 6.893958 ACGAAGTCTAACAATCAGCTTATG 57.106 37.500 0.00 0.00 29.74 1.90
4935 5459 5.812642 ACGAAGTCTAACAATCAGCTTATGG 59.187 40.000 0.00 0.00 29.74 2.74
4936 5460 5.812642 CGAAGTCTAACAATCAGCTTATGGT 59.187 40.000 0.00 0.00 0.00 3.55
4937 5461 6.313905 CGAAGTCTAACAATCAGCTTATGGTT 59.686 38.462 5.96 5.96 29.99 3.67
4938 5462 7.491372 CGAAGTCTAACAATCAGCTTATGGTTA 59.509 37.037 7.49 7.49 28.49 2.85
4939 5463 8.494016 AAGTCTAACAATCAGCTTATGGTTAC 57.506 34.615 4.07 0.00 28.49 2.50
4940 5464 6.757010 AGTCTAACAATCAGCTTATGGTTACG 59.243 38.462 4.07 2.45 28.49 3.18
4941 5465 6.534079 GTCTAACAATCAGCTTATGGTTACGT 59.466 38.462 4.07 0.00 28.49 3.57
4942 5466 5.796350 AACAATCAGCTTATGGTTACGTC 57.204 39.130 0.00 0.00 28.49 4.34
4943 5467 4.827692 ACAATCAGCTTATGGTTACGTCA 58.172 39.130 0.00 0.00 28.49 4.35
4944 5468 4.630069 ACAATCAGCTTATGGTTACGTCAC 59.370 41.667 0.00 0.00 28.49 3.67
4945 5469 2.871133 TCAGCTTATGGTTACGTCACG 58.129 47.619 0.00 0.00 0.00 4.35
4946 5470 1.924524 CAGCTTATGGTTACGTCACGG 59.075 52.381 0.35 0.00 0.00 4.94
4947 5471 1.134907 AGCTTATGGTTACGTCACGGG 60.135 52.381 0.35 0.00 0.00 5.28
4948 5472 1.283736 CTTATGGTTACGTCACGGGC 58.716 55.000 0.35 0.00 0.00 6.13
4949 5473 0.458197 TTATGGTTACGTCACGGGCG 60.458 55.000 0.35 0.00 0.00 6.13
4950 5474 1.311651 TATGGTTACGTCACGGGCGA 61.312 55.000 0.35 0.00 0.00 5.54
4951 5475 2.049248 GGTTACGTCACGGGCGAA 60.049 61.111 0.35 0.00 0.00 4.70
4952 5476 1.446618 GGTTACGTCACGGGCGAAT 60.447 57.895 0.35 0.00 0.00 3.34
4953 5477 1.689352 GGTTACGTCACGGGCGAATG 61.689 60.000 0.35 0.00 0.00 2.67
4954 5478 2.095847 TTACGTCACGGGCGAATGC 61.096 57.895 0.35 0.00 41.71 3.56
4955 5479 2.495366 TTACGTCACGGGCGAATGCT 62.495 55.000 0.35 0.00 42.25 3.79
4956 5480 3.853330 CGTCACGGGCGAATGCTG 61.853 66.667 0.00 0.00 42.25 4.41
4957 5481 4.166011 GTCACGGGCGAATGCTGC 62.166 66.667 0.00 0.00 42.25 5.25
4958 5482 4.393155 TCACGGGCGAATGCTGCT 62.393 61.111 0.00 0.00 42.25 4.24
4959 5483 4.170062 CACGGGCGAATGCTGCTG 62.170 66.667 0.00 0.00 42.25 4.41
4962 5486 3.207669 GGGCGAATGCTGCTGGAG 61.208 66.667 0.00 0.00 42.25 3.86
4963 5487 2.437359 GGCGAATGCTGCTGGAGT 60.437 61.111 0.00 0.00 42.25 3.85
4964 5488 2.758089 GGCGAATGCTGCTGGAGTG 61.758 63.158 0.00 0.00 42.25 3.51
4965 5489 2.758089 GCGAATGCTGCTGGAGTGG 61.758 63.158 0.00 0.00 38.39 4.00
4966 5490 2.110967 CGAATGCTGCTGGAGTGGG 61.111 63.158 0.00 0.00 0.00 4.61
4967 5491 1.300963 GAATGCTGCTGGAGTGGGA 59.699 57.895 0.00 0.00 0.00 4.37
4968 5492 0.322816 GAATGCTGCTGGAGTGGGAA 60.323 55.000 0.00 0.00 0.00 3.97
4969 5493 0.112995 AATGCTGCTGGAGTGGGAAA 59.887 50.000 0.00 0.00 0.00 3.13
4970 5494 0.323178 ATGCTGCTGGAGTGGGAAAG 60.323 55.000 0.00 0.00 0.00 2.62
4971 5495 1.073897 GCTGCTGGAGTGGGAAAGT 59.926 57.895 0.00 0.00 0.00 2.66
4972 5496 1.239968 GCTGCTGGAGTGGGAAAGTG 61.240 60.000 0.00 0.00 0.00 3.16
4973 5497 0.109342 CTGCTGGAGTGGGAAAGTGT 59.891 55.000 0.00 0.00 0.00 3.55
4974 5498 0.550914 TGCTGGAGTGGGAAAGTGTT 59.449 50.000 0.00 0.00 0.00 3.32
4975 5499 1.771854 TGCTGGAGTGGGAAAGTGTTA 59.228 47.619 0.00 0.00 0.00 2.41
4976 5500 2.173782 TGCTGGAGTGGGAAAGTGTTAA 59.826 45.455 0.00 0.00 0.00 2.01
4977 5501 2.814336 GCTGGAGTGGGAAAGTGTTAAG 59.186 50.000 0.00 0.00 0.00 1.85
4978 5502 2.814336 CTGGAGTGGGAAAGTGTTAAGC 59.186 50.000 0.00 0.00 0.00 3.09
4979 5503 1.804748 GGAGTGGGAAAGTGTTAAGCG 59.195 52.381 0.00 0.00 0.00 4.68
4980 5504 1.804748 GAGTGGGAAAGTGTTAAGCGG 59.195 52.381 0.00 0.00 0.00 5.52
4981 5505 1.418637 AGTGGGAAAGTGTTAAGCGGA 59.581 47.619 0.00 0.00 0.00 5.54
4982 5506 1.534163 GTGGGAAAGTGTTAAGCGGAC 59.466 52.381 0.00 0.00 0.00 4.79
4983 5507 0.794473 GGGAAAGTGTTAAGCGGACG 59.206 55.000 0.00 0.00 0.00 4.79
4984 5508 0.165295 GGAAAGTGTTAAGCGGACGC 59.835 55.000 8.91 8.91 42.33 5.19
4985 5509 0.165295 GAAAGTGTTAAGCGGACGCC 59.835 55.000 13.63 0.00 43.17 5.68
4986 5510 0.533308 AAAGTGTTAAGCGGACGCCA 60.533 50.000 13.63 0.98 43.17 5.69
4987 5511 0.321298 AAGTGTTAAGCGGACGCCAT 60.321 50.000 13.63 5.47 43.17 4.40
4988 5512 1.019278 AGTGTTAAGCGGACGCCATG 61.019 55.000 13.63 0.00 43.17 3.66
4989 5513 1.017177 GTGTTAAGCGGACGCCATGA 61.017 55.000 13.63 0.00 43.17 3.07
4990 5514 1.017177 TGTTAAGCGGACGCCATGAC 61.017 55.000 13.63 10.07 43.17 3.06
4991 5515 0.739813 GTTAAGCGGACGCCATGACT 60.740 55.000 13.63 0.00 43.17 3.41
4992 5516 0.036765 TTAAGCGGACGCCATGACTT 60.037 50.000 13.63 2.55 43.17 3.01
4993 5517 0.739462 TAAGCGGACGCCATGACTTG 60.739 55.000 13.63 0.00 43.17 3.16
4994 5518 2.731691 AAGCGGACGCCATGACTTGT 62.732 55.000 13.63 0.00 43.17 3.16
4995 5519 2.325082 GCGGACGCCATGACTTGTT 61.325 57.895 5.20 0.00 34.56 2.83
4996 5520 1.852067 GCGGACGCCATGACTTGTTT 61.852 55.000 5.20 0.00 34.56 2.83
4997 5521 0.591170 CGGACGCCATGACTTGTTTT 59.409 50.000 0.00 0.00 0.00 2.43
4998 5522 1.662876 CGGACGCCATGACTTGTTTTG 60.663 52.381 0.00 0.00 0.00 2.44
4999 5523 1.336755 GGACGCCATGACTTGTTTTGT 59.663 47.619 0.00 0.00 0.00 2.83
5000 5524 2.223711 GGACGCCATGACTTGTTTTGTT 60.224 45.455 0.00 0.00 0.00 2.83
5022 5546 3.721370 ATTGATGGGGCGGCCAGTC 62.721 63.158 30.95 24.94 0.00 3.51
5024 5548 4.864334 GATGGGGCGGCCAGTCTG 62.864 72.222 30.95 0.00 0.00 3.51
5045 5570 2.100631 GTTCATCGGGTCACGCTGG 61.101 63.158 0.00 0.00 43.86 4.85
5046 5571 2.279810 TTCATCGGGTCACGCTGGA 61.280 57.895 0.00 0.00 43.86 3.86
5047 5572 2.202797 CATCGGGTCACGCTGGAG 60.203 66.667 0.00 0.00 43.86 3.86
5048 5573 2.680352 ATCGGGTCACGCTGGAGT 60.680 61.111 0.00 0.00 43.86 3.85
5049 5574 2.711922 ATCGGGTCACGCTGGAGTC 61.712 63.158 0.00 0.00 43.86 3.36
5050 5575 3.374402 CGGGTCACGCTGGAGTCT 61.374 66.667 0.00 0.00 34.82 3.24
5051 5576 2.262915 GGGTCACGCTGGAGTCTG 59.737 66.667 0.00 0.00 0.00 3.51
5052 5577 2.276116 GGGTCACGCTGGAGTCTGA 61.276 63.158 0.00 0.00 0.00 3.27
5053 5578 1.666011 GGTCACGCTGGAGTCTGAA 59.334 57.895 0.00 0.00 0.00 3.02
5054 5579 0.389166 GGTCACGCTGGAGTCTGAAG 60.389 60.000 0.00 0.00 0.00 3.02
5055 5580 1.011451 GTCACGCTGGAGTCTGAAGC 61.011 60.000 0.00 0.00 0.00 3.86
5056 5581 1.739562 CACGCTGGAGTCTGAAGCC 60.740 63.158 7.22 0.00 33.24 4.35
5057 5582 2.125350 CGCTGGAGTCTGAAGCCC 60.125 66.667 7.22 0.00 33.24 5.19
5058 5583 2.654079 CGCTGGAGTCTGAAGCCCT 61.654 63.158 7.22 0.00 33.24 5.19
5059 5584 1.220477 GCTGGAGTCTGAAGCCCTC 59.780 63.158 0.00 0.00 0.00 4.30
5060 5585 1.515020 CTGGAGTCTGAAGCCCTCG 59.485 63.158 0.00 0.00 0.00 4.63
5061 5586 2.185608 GGAGTCTGAAGCCCTCGC 59.814 66.667 0.00 0.00 0.00 5.03
5062 5587 2.185608 GAGTCTGAAGCCCTCGCC 59.814 66.667 0.00 0.00 34.57 5.54
5063 5588 2.284258 AGTCTGAAGCCCTCGCCT 60.284 61.111 0.00 0.00 34.57 5.52
5064 5589 2.125350 GTCTGAAGCCCTCGCCTG 60.125 66.667 0.00 0.00 34.57 4.85
5065 5590 3.393970 TCTGAAGCCCTCGCCTGG 61.394 66.667 0.00 0.00 34.57 4.45
5066 5591 3.710722 CTGAAGCCCTCGCCTGGT 61.711 66.667 0.00 0.00 34.57 4.00
5067 5592 3.965539 CTGAAGCCCTCGCCTGGTG 62.966 68.421 0.00 0.00 34.57 4.17
5078 5603 2.674380 CCTGGTGCAGGCCTCAAC 60.674 66.667 0.00 7.89 45.13 3.18
5079 5604 2.433446 CTGGTGCAGGCCTCAACT 59.567 61.111 17.58 0.00 0.00 3.16
5080 5605 1.673665 CTGGTGCAGGCCTCAACTC 60.674 63.158 17.58 6.23 0.00 3.01
5081 5606 2.121992 CTGGTGCAGGCCTCAACTCT 62.122 60.000 17.58 0.00 0.00 3.24
5082 5607 1.073897 GGTGCAGGCCTCAACTCTT 59.926 57.895 0.00 0.00 0.00 2.85
5118 5643 3.814316 GCAGAACTTGGGGTCCTGTATTT 60.814 47.826 0.00 0.00 0.00 1.40
5135 5660 5.560724 TGTATTTTGAGGCTAGAAGCAACT 58.439 37.500 0.00 0.00 44.75 3.16
5146 5671 1.093159 GAAGCAACTGCATCCTCCAG 58.907 55.000 4.22 0.00 45.16 3.86
5147 5672 0.964358 AAGCAACTGCATCCTCCAGC 60.964 55.000 4.22 0.00 45.16 4.85
5148 5673 2.758089 GCAACTGCATCCTCCAGCG 61.758 63.158 0.00 0.00 41.59 5.18
5149 5674 2.110967 CAACTGCATCCTCCAGCGG 61.111 63.158 0.00 0.00 42.73 5.52
5150 5675 2.293318 AACTGCATCCTCCAGCGGA 61.293 57.895 0.00 0.00 39.47 5.54
5151 5676 1.630126 AACTGCATCCTCCAGCGGAT 61.630 55.000 0.00 0.00 44.53 4.18
5155 5680 4.056805 ATCCTCCAGCGGATGTGT 57.943 55.556 0.00 0.00 42.13 3.72
5156 5681 1.826024 ATCCTCCAGCGGATGTGTC 59.174 57.895 0.00 0.00 42.13 3.67
5157 5682 1.690219 ATCCTCCAGCGGATGTGTCC 61.690 60.000 0.00 0.00 42.13 4.02
5158 5683 2.362369 CCTCCAGCGGATGTGTCCT 61.362 63.158 0.00 0.00 42.73 3.85
5159 5684 1.142748 CTCCAGCGGATGTGTCCTC 59.857 63.158 0.00 0.00 42.73 3.71
5160 5685 2.187946 CCAGCGGATGTGTCCTCC 59.812 66.667 0.00 0.00 42.73 4.30
5165 5690 2.982130 GGATGTGTCCTCCGCTGT 59.018 61.111 0.00 0.00 41.60 4.40
5166 5691 1.153549 GGATGTGTCCTCCGCTGTC 60.154 63.158 0.00 0.00 41.60 3.51
5167 5692 1.608717 GGATGTGTCCTCCGCTGTCT 61.609 60.000 0.00 0.00 41.60 3.41
5168 5693 0.459237 GATGTGTCCTCCGCTGTCTG 60.459 60.000 0.00 0.00 0.00 3.51
5169 5694 1.892819 ATGTGTCCTCCGCTGTCTGG 61.893 60.000 0.00 0.00 0.00 3.86
5170 5695 2.117423 TGTCCTCCGCTGTCTGGA 59.883 61.111 0.00 0.00 0.00 3.86
5171 5696 1.305297 TGTCCTCCGCTGTCTGGAT 60.305 57.895 0.00 0.00 34.32 3.41
5172 5697 0.904865 TGTCCTCCGCTGTCTGGATT 60.905 55.000 0.00 0.00 34.32 3.01
5173 5698 1.112113 GTCCTCCGCTGTCTGGATTA 58.888 55.000 0.00 0.00 34.32 1.75
5174 5699 1.480954 GTCCTCCGCTGTCTGGATTAA 59.519 52.381 0.00 0.00 34.32 1.40
5175 5700 1.757118 TCCTCCGCTGTCTGGATTAAG 59.243 52.381 0.00 0.00 34.32 1.85
5176 5701 1.576356 CTCCGCTGTCTGGATTAAGC 58.424 55.000 0.00 0.00 34.32 3.09
5177 5702 0.901827 TCCGCTGTCTGGATTAAGCA 59.098 50.000 0.00 0.00 35.33 3.91
5178 5703 1.009829 CCGCTGTCTGGATTAAGCAC 58.990 55.000 0.00 0.00 35.33 4.40
5179 5704 1.675714 CCGCTGTCTGGATTAAGCACA 60.676 52.381 0.00 0.00 35.33 4.57
5180 5705 2.283298 CGCTGTCTGGATTAAGCACAT 58.717 47.619 0.00 0.00 35.33 3.21
5181 5706 2.031314 CGCTGTCTGGATTAAGCACATG 59.969 50.000 0.00 0.00 35.33 3.21
5182 5707 2.223433 GCTGTCTGGATTAAGCACATGC 60.223 50.000 0.00 0.00 42.49 4.06
5183 5708 2.357009 CTGTCTGGATTAAGCACATGCC 59.643 50.000 0.00 0.00 43.38 4.40
5184 5709 1.331756 GTCTGGATTAAGCACATGCCG 59.668 52.381 0.00 0.00 43.38 5.69
5185 5710 0.664761 CTGGATTAAGCACATGCCGG 59.335 55.000 0.00 0.00 43.38 6.13
5186 5711 0.751277 TGGATTAAGCACATGCCGGG 60.751 55.000 2.18 0.00 43.38 5.73
5187 5712 1.360192 GATTAAGCACATGCCGGGC 59.640 57.895 13.32 13.32 43.38 6.13
5188 5713 1.076777 ATTAAGCACATGCCGGGCT 60.077 52.632 21.46 0.00 43.38 5.19
5190 5715 0.897863 TTAAGCACATGCCGGGCTTT 60.898 50.000 21.46 4.79 44.93 3.51
5191 5716 1.594194 TAAGCACATGCCGGGCTTTG 61.594 55.000 21.46 19.04 44.93 2.77
5192 5717 3.683937 GCACATGCCGGGCTTTGT 61.684 61.111 21.46 19.69 34.31 2.83
5193 5718 3.050339 CACATGCCGGGCTTTGTT 58.950 55.556 21.46 6.25 0.00 2.83
5194 5719 1.367102 CACATGCCGGGCTTTGTTT 59.633 52.632 21.46 0.51 0.00 2.83
5195 5720 0.249826 CACATGCCGGGCTTTGTTTT 60.250 50.000 21.46 0.00 0.00 2.43
5196 5721 0.467804 ACATGCCGGGCTTTGTTTTT 59.532 45.000 21.46 0.00 0.00 1.94
5197 5722 1.689273 ACATGCCGGGCTTTGTTTTTA 59.311 42.857 21.46 0.00 0.00 1.52
5198 5723 2.288763 ACATGCCGGGCTTTGTTTTTAG 60.289 45.455 21.46 1.97 0.00 1.85
5199 5724 0.676736 TGCCGGGCTTTGTTTTTAGG 59.323 50.000 21.46 0.00 0.00 2.69
5200 5725 0.677288 GCCGGGCTTTGTTTTTAGGT 59.323 50.000 12.87 0.00 0.00 3.08
5201 5726 1.069513 GCCGGGCTTTGTTTTTAGGTT 59.930 47.619 12.87 0.00 0.00 3.50
5202 5727 2.484065 GCCGGGCTTTGTTTTTAGGTTT 60.484 45.455 12.87 0.00 0.00 3.27
5203 5728 3.127589 CCGGGCTTTGTTTTTAGGTTTG 58.872 45.455 0.00 0.00 0.00 2.93
5204 5729 3.127589 CGGGCTTTGTTTTTAGGTTTGG 58.872 45.455 0.00 0.00 0.00 3.28
5205 5730 3.431068 CGGGCTTTGTTTTTAGGTTTGGT 60.431 43.478 0.00 0.00 0.00 3.67
5206 5731 4.519213 GGGCTTTGTTTTTAGGTTTGGTT 58.481 39.130 0.00 0.00 0.00 3.67
5207 5732 4.334203 GGGCTTTGTTTTTAGGTTTGGTTG 59.666 41.667 0.00 0.00 0.00 3.77
5208 5733 4.201871 GGCTTTGTTTTTAGGTTTGGTTGC 60.202 41.667 0.00 0.00 0.00 4.17
5209 5734 4.201871 GCTTTGTTTTTAGGTTTGGTTGCC 60.202 41.667 0.00 0.00 0.00 4.52
5210 5735 4.553330 TTGTTTTTAGGTTTGGTTGCCA 57.447 36.364 0.00 0.00 0.00 4.92
5211 5736 4.130286 TGTTTTTAGGTTTGGTTGCCAG 57.870 40.909 0.00 0.00 33.81 4.85
5212 5737 2.869801 GTTTTTAGGTTTGGTTGCCAGC 59.130 45.455 0.00 0.00 33.81 4.85
5213 5738 0.671251 TTTAGGTTTGGTTGCCAGCG 59.329 50.000 0.00 0.00 33.81 5.18
5214 5739 0.179015 TTAGGTTTGGTTGCCAGCGA 60.179 50.000 0.00 0.00 33.81 4.93
5215 5740 0.037590 TAGGTTTGGTTGCCAGCGAT 59.962 50.000 0.00 0.00 33.81 4.58
5216 5741 0.827507 AGGTTTGGTTGCCAGCGATT 60.828 50.000 0.00 0.00 33.81 3.34
5217 5742 0.388520 GGTTTGGTTGCCAGCGATTC 60.389 55.000 0.00 0.00 33.81 2.52
5218 5743 0.598065 GTTTGGTTGCCAGCGATTCT 59.402 50.000 0.00 0.00 33.81 2.40
5219 5744 0.597568 TTTGGTTGCCAGCGATTCTG 59.402 50.000 0.00 0.00 42.49 3.02
5220 5745 1.865788 TTGGTTGCCAGCGATTCTGC 61.866 55.000 0.00 0.00 41.50 4.26
5221 5746 2.486966 GTTGCCAGCGATTCTGCC 59.513 61.111 0.00 0.00 41.50 4.85
5222 5747 3.126879 TTGCCAGCGATTCTGCCG 61.127 61.111 0.00 0.00 41.50 5.69
5229 5754 3.566261 CGATTCTGCCGCAACAGT 58.434 55.556 0.00 0.00 38.84 3.55
5230 5755 1.868997 CGATTCTGCCGCAACAGTT 59.131 52.632 0.00 0.00 38.84 3.16
5231 5756 0.238289 CGATTCTGCCGCAACAGTTT 59.762 50.000 0.00 0.00 38.84 2.66
5232 5757 1.725931 CGATTCTGCCGCAACAGTTTC 60.726 52.381 0.00 1.79 38.84 2.78
5233 5758 1.266718 GATTCTGCCGCAACAGTTTCA 59.733 47.619 0.00 0.00 38.84 2.69
5234 5759 0.662619 TTCTGCCGCAACAGTTTCAG 59.337 50.000 0.00 0.00 38.84 3.02
5235 5760 1.165907 TCTGCCGCAACAGTTTCAGG 61.166 55.000 0.00 0.00 38.84 3.86
5236 5761 1.447317 CTGCCGCAACAGTTTCAGGT 61.447 55.000 0.00 0.00 32.78 4.00
5237 5762 1.034838 TGCCGCAACAGTTTCAGGTT 61.035 50.000 0.00 0.00 0.00 3.50
5238 5763 0.948678 GCCGCAACAGTTTCAGGTTA 59.051 50.000 0.00 0.00 0.00 2.85
5239 5764 1.335496 GCCGCAACAGTTTCAGGTTAA 59.665 47.619 0.00 0.00 0.00 2.01
5240 5765 2.030274 GCCGCAACAGTTTCAGGTTAAT 60.030 45.455 0.00 0.00 0.00 1.40
5241 5766 3.564511 CCGCAACAGTTTCAGGTTAATG 58.435 45.455 0.00 0.00 0.00 1.90
5242 5767 3.564511 CGCAACAGTTTCAGGTTAATGG 58.435 45.455 0.00 0.00 0.00 3.16
5243 5768 3.252215 CGCAACAGTTTCAGGTTAATGGA 59.748 43.478 0.00 0.00 0.00 3.41
5244 5769 4.261405 CGCAACAGTTTCAGGTTAATGGAA 60.261 41.667 0.00 0.00 0.00 3.53
5245 5770 5.596845 GCAACAGTTTCAGGTTAATGGAAA 58.403 37.500 0.00 0.00 0.00 3.13
5246 5771 5.691754 GCAACAGTTTCAGGTTAATGGAAAG 59.308 40.000 0.00 0.00 31.75 2.62
5247 5772 6.682861 GCAACAGTTTCAGGTTAATGGAAAGT 60.683 38.462 0.00 0.00 35.23 2.66
5249 5774 6.391227 CAGTTTCAGGTTAATGGAAAGTGT 57.609 37.500 17.42 1.34 42.65 3.55
5250 5775 6.805713 CAGTTTCAGGTTAATGGAAAGTGTT 58.194 36.000 17.42 0.00 42.65 3.32
5251 5776 7.264947 CAGTTTCAGGTTAATGGAAAGTGTTT 58.735 34.615 17.42 0.00 42.65 2.83
5252 5777 7.763985 CAGTTTCAGGTTAATGGAAAGTGTTTT 59.236 33.333 17.42 0.00 42.65 2.43
5253 5778 7.979537 AGTTTCAGGTTAATGGAAAGTGTTTTC 59.020 33.333 0.00 0.00 41.59 2.29
5323 5848 7.034685 TGTTTTCCTTTTCTTTACTACCTGC 57.965 36.000 0.00 0.00 0.00 4.85
5324 5849 6.831868 TGTTTTCCTTTTCTTTACTACCTGCT 59.168 34.615 0.00 0.00 0.00 4.24
5325 5850 7.340999 TGTTTTCCTTTTCTTTACTACCTGCTT 59.659 33.333 0.00 0.00 0.00 3.91
5326 5851 6.877611 TTCCTTTTCTTTACTACCTGCTTG 57.122 37.500 0.00 0.00 0.00 4.01
5327 5852 5.937111 TCCTTTTCTTTACTACCTGCTTGT 58.063 37.500 0.00 0.00 0.00 3.16
5328 5853 6.362248 TCCTTTTCTTTACTACCTGCTTGTT 58.638 36.000 0.00 0.00 0.00 2.83
5329 5854 6.831868 TCCTTTTCTTTACTACCTGCTTGTTT 59.168 34.615 0.00 0.00 0.00 2.83
5330 5855 7.340999 TCCTTTTCTTTACTACCTGCTTGTTTT 59.659 33.333 0.00 0.00 0.00 2.43
5331 5856 7.648112 CCTTTTCTTTACTACCTGCTTGTTTTC 59.352 37.037 0.00 0.00 0.00 2.29
5332 5857 7.875327 TTTCTTTACTACCTGCTTGTTTTCT 57.125 32.000 0.00 0.00 0.00 2.52
5333 5858 7.875327 TTCTTTACTACCTGCTTGTTTTCTT 57.125 32.000 0.00 0.00 0.00 2.52
5334 5859 7.875327 TCTTTACTACCTGCTTGTTTTCTTT 57.125 32.000 0.00 0.00 0.00 2.52
5335 5860 8.967664 TCTTTACTACCTGCTTGTTTTCTTTA 57.032 30.769 0.00 0.00 0.00 1.85
5336 5861 9.569122 TCTTTACTACCTGCTTGTTTTCTTTAT 57.431 29.630 0.00 0.00 0.00 1.40
5337 5862 9.827411 CTTTACTACCTGCTTGTTTTCTTTATC 57.173 33.333 0.00 0.00 0.00 1.75
5338 5863 9.569122 TTTACTACCTGCTTGTTTTCTTTATCT 57.431 29.630 0.00 0.00 0.00 1.98
5339 5864 9.569122 TTACTACCTGCTTGTTTTCTTTATCTT 57.431 29.630 0.00 0.00 0.00 2.40
5340 5865 8.465273 ACTACCTGCTTGTTTTCTTTATCTTT 57.535 30.769 0.00 0.00 0.00 2.52
5341 5866 9.569122 ACTACCTGCTTGTTTTCTTTATCTTTA 57.431 29.630 0.00 0.00 0.00 1.85
5343 5868 8.465273 ACCTGCTTGTTTTCTTTATCTTTAGT 57.535 30.769 0.00 0.00 0.00 2.24
5344 5869 9.569122 ACCTGCTTGTTTTCTTTATCTTTAGTA 57.431 29.630 0.00 0.00 0.00 1.82
5372 5897 3.748868 GGAAAATTCCAGCGAAGTCTC 57.251 47.619 7.32 0.00 46.76 3.36
5373 5898 3.074412 GGAAAATTCCAGCGAAGTCTCA 58.926 45.455 7.32 0.00 46.76 3.27
5374 5899 3.691609 GGAAAATTCCAGCGAAGTCTCAT 59.308 43.478 7.32 0.00 46.76 2.90
5375 5900 4.156739 GGAAAATTCCAGCGAAGTCTCATT 59.843 41.667 7.32 0.00 46.76 2.57
5376 5901 4.691860 AAATTCCAGCGAAGTCTCATTG 57.308 40.909 0.00 0.00 0.00 2.82
5377 5902 3.616956 ATTCCAGCGAAGTCTCATTGA 57.383 42.857 0.00 0.00 0.00 2.57
5378 5903 2.662006 TCCAGCGAAGTCTCATTGAG 57.338 50.000 7.38 7.38 0.00 3.02
5379 5904 2.171003 TCCAGCGAAGTCTCATTGAGA 58.829 47.619 12.38 12.38 36.22 3.27
5380 5905 2.762887 TCCAGCGAAGTCTCATTGAGAT 59.237 45.455 18.89 4.59 40.98 2.75
5381 5906 3.954258 TCCAGCGAAGTCTCATTGAGATA 59.046 43.478 18.89 0.00 40.98 1.98
5382 5907 4.037327 TCCAGCGAAGTCTCATTGAGATAG 59.963 45.833 18.89 11.55 40.98 2.08
5383 5908 4.202101 CCAGCGAAGTCTCATTGAGATAGT 60.202 45.833 18.89 7.85 40.98 2.12
5384 5909 4.739228 CAGCGAAGTCTCATTGAGATAGTG 59.261 45.833 18.89 10.99 40.98 2.74
5385 5910 3.489047 GCGAAGTCTCATTGAGATAGTGC 59.511 47.826 18.89 16.04 40.98 4.40
5386 5911 4.736168 GCGAAGTCTCATTGAGATAGTGCT 60.736 45.833 18.89 8.53 40.98 4.40
5387 5912 4.975502 CGAAGTCTCATTGAGATAGTGCTC 59.024 45.833 18.89 5.05 40.98 4.26
5388 5913 5.449725 CGAAGTCTCATTGAGATAGTGCTCA 60.450 44.000 18.89 0.00 40.98 4.26
5396 5921 4.298744 TGAGATAGTGCTCAATGACTCG 57.701 45.455 0.00 0.00 41.65 4.18
5397 5922 3.049206 GAGATAGTGCTCAATGACTCGC 58.951 50.000 0.00 0.00 35.01 5.03
5398 5923 2.428530 AGATAGTGCTCAATGACTCGCA 59.571 45.455 0.00 0.00 0.00 5.10
5399 5924 2.741759 TAGTGCTCAATGACTCGCAA 57.258 45.000 0.00 0.00 33.74 4.85
5400 5925 2.105006 AGTGCTCAATGACTCGCAAT 57.895 45.000 0.00 0.00 33.74 3.56
5401 5926 2.005451 AGTGCTCAATGACTCGCAATC 58.995 47.619 0.00 0.00 33.74 2.67
5402 5927 1.063174 GTGCTCAATGACTCGCAATCC 59.937 52.381 0.00 0.00 33.74 3.01
5403 5928 0.302890 GCTCAATGACTCGCAATCCG 59.697 55.000 0.00 0.00 38.61 4.18
5404 5929 0.302890 CTCAATGACTCGCAATCCGC 59.697 55.000 0.00 0.00 36.73 5.54
5405 5930 0.390998 TCAATGACTCGCAATCCGCA 60.391 50.000 0.00 0.00 42.60 5.69
5406 5931 0.027194 CAATGACTCGCAATCCGCAG 59.973 55.000 0.00 0.00 42.60 5.18
5407 5932 0.108186 AATGACTCGCAATCCGCAGA 60.108 50.000 0.00 0.00 42.60 4.26
5408 5933 0.105593 ATGACTCGCAATCCGCAGAT 59.894 50.000 0.00 0.00 42.60 2.90
5409 5934 0.744281 TGACTCGCAATCCGCAGATA 59.256 50.000 0.00 0.00 42.60 1.98
5410 5935 1.341209 TGACTCGCAATCCGCAGATAT 59.659 47.619 0.00 0.00 42.60 1.63
5411 5936 2.224042 TGACTCGCAATCCGCAGATATT 60.224 45.455 0.00 0.00 42.60 1.28
5412 5937 2.408050 ACTCGCAATCCGCAGATATTC 58.592 47.619 0.00 0.00 42.60 1.75
5413 5938 1.728971 CTCGCAATCCGCAGATATTCC 59.271 52.381 0.00 0.00 42.60 3.01
5414 5939 1.344438 TCGCAATCCGCAGATATTCCT 59.656 47.619 0.00 0.00 42.60 3.36
5415 5940 2.560981 TCGCAATCCGCAGATATTCCTA 59.439 45.455 0.00 0.00 42.60 2.94
5416 5941 2.668457 CGCAATCCGCAGATATTCCTAC 59.332 50.000 0.00 0.00 42.60 3.18
5417 5942 3.664107 GCAATCCGCAGATATTCCTACA 58.336 45.455 0.00 0.00 41.79 2.74
5418 5943 4.065088 GCAATCCGCAGATATTCCTACAA 58.935 43.478 0.00 0.00 41.79 2.41
5419 5944 4.083802 GCAATCCGCAGATATTCCTACAAC 60.084 45.833 0.00 0.00 41.79 3.32
5420 5945 3.364889 TCCGCAGATATTCCTACAACG 57.635 47.619 0.00 0.00 0.00 4.10
5421 5946 2.691526 TCCGCAGATATTCCTACAACGT 59.308 45.455 0.00 0.00 0.00 3.99
5422 5947 3.131577 TCCGCAGATATTCCTACAACGTT 59.868 43.478 0.00 0.00 0.00 3.99
5423 5948 3.869246 CCGCAGATATTCCTACAACGTTT 59.131 43.478 0.00 0.00 0.00 3.60
5424 5949 4.260212 CCGCAGATATTCCTACAACGTTTG 60.260 45.833 0.00 0.00 0.00 2.93
5426 5951 5.163893 CGCAGATATTCCTACAACGTTTGTT 60.164 40.000 0.00 0.00 42.22 2.83
5427 5952 6.608610 GCAGATATTCCTACAACGTTTGTTT 58.391 36.000 0.00 0.00 42.22 2.83
5428 5953 7.081976 GCAGATATTCCTACAACGTTTGTTTT 58.918 34.615 0.00 0.00 42.22 2.43
5429 5954 7.060633 GCAGATATTCCTACAACGTTTGTTTTG 59.939 37.037 0.00 0.00 42.22 2.44
5430 5955 8.286800 CAGATATTCCTACAACGTTTGTTTTGA 58.713 33.333 0.00 0.00 42.22 2.69
5431 5956 9.010029 AGATATTCCTACAACGTTTGTTTTGAT 57.990 29.630 0.00 0.00 42.22 2.57
5432 5957 9.620660 GATATTCCTACAACGTTTGTTTTGATT 57.379 29.630 0.00 0.00 42.22 2.57
5433 5958 7.924103 ATTCCTACAACGTTTGTTTTGATTC 57.076 32.000 0.00 0.00 42.22 2.52
5434 5959 6.438259 TCCTACAACGTTTGTTTTGATTCA 57.562 33.333 0.00 0.00 42.22 2.57
5435 5960 6.491394 TCCTACAACGTTTGTTTTGATTCAG 58.509 36.000 0.00 0.00 42.22 3.02
5436 5961 5.173131 CCTACAACGTTTGTTTTGATTCAGC 59.827 40.000 0.00 0.00 42.22 4.26
5437 5962 3.862845 ACAACGTTTGTTTTGATTCAGCC 59.137 39.130 0.00 0.00 42.22 4.85
5438 5963 2.726633 ACGTTTGTTTTGATTCAGCCG 58.273 42.857 0.00 0.00 0.00 5.52
5439 5964 2.050691 CGTTTGTTTTGATTCAGCCGG 58.949 47.619 0.00 0.00 0.00 6.13
5440 5965 1.792367 GTTTGTTTTGATTCAGCCGGC 59.208 47.619 21.89 21.89 0.00 6.13
5441 5966 1.035923 TTGTTTTGATTCAGCCGGCA 58.964 45.000 31.54 8.70 0.00 5.69
5442 5967 0.597568 TGTTTTGATTCAGCCGGCAG 59.402 50.000 31.54 22.82 0.00 4.85
5443 5968 0.881118 GTTTTGATTCAGCCGGCAGA 59.119 50.000 31.54 25.17 0.00 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 8.540507 AGGCTAAACTCTATCATTCAGACTTA 57.459 34.615 0.00 0.00 0.00 2.24
23 24 2.841795 ACCCTAAGTGGCTAGGCTAAA 58.158 47.619 18.18 0.00 37.69 1.85
32 33 1.212195 CCTTCCCTAACCCTAAGTGGC 59.788 57.143 0.00 0.00 0.00 5.01
35 36 4.918273 AGTTTTCCTTCCCTAACCCTAAGT 59.082 41.667 0.00 0.00 0.00 2.24
40 41 5.014858 CCTTTAGTTTTCCTTCCCTAACCC 58.985 45.833 0.00 0.00 0.00 4.11
89 91 2.125512 GTCGGCGTTGGAGATGCT 60.126 61.111 6.85 0.00 40.27 3.79
90 92 3.195698 GGTCGGCGTTGGAGATGC 61.196 66.667 6.85 0.00 39.65 3.91
103 105 3.053896 GGGCGGTTTTGAGGGTCG 61.054 66.667 0.00 0.00 0.00 4.79
110 112 1.665735 GCATATATGCGGGCGGTTTTG 60.666 52.381 21.33 0.00 44.67 2.44
111 113 0.596082 GCATATATGCGGGCGGTTTT 59.404 50.000 21.33 0.00 44.67 2.43
149 151 0.038343 CGTGTTGGATGGCTTTTGGG 60.038 55.000 0.00 0.00 0.00 4.12
152 154 1.815817 GCCCGTGTTGGATGGCTTTT 61.816 55.000 0.00 0.00 42.00 2.27
153 155 2.275380 GCCCGTGTTGGATGGCTTT 61.275 57.895 0.00 0.00 42.00 3.51
162 164 3.242608 CGGATTAATACAAGCCCGTGTTG 60.243 47.826 0.00 0.00 32.75 3.33
197 199 0.308684 GGTTCGGGAAAAACGTGGTC 59.691 55.000 0.00 0.00 0.00 4.02
202 204 1.468895 CGTTTGGTTCGGGAAAAACG 58.531 50.000 13.42 13.42 45.82 3.60
240 260 1.064946 CAGACGGATGAGCGGACTC 59.935 63.158 0.00 0.00 43.76 3.36
276 296 0.104671 GGACTGAGAGAGAGGCATGC 59.895 60.000 9.90 9.90 0.00 4.06
281 301 1.680735 CCATTCGGACTGAGAGAGAGG 59.319 57.143 0.00 0.00 0.00 3.69
329 349 2.858622 TGCCTTCATCTTTCGGCAG 58.141 52.632 0.00 0.00 46.75 4.85
332 352 3.504863 CATGTTTGCCTTCATCTTTCGG 58.495 45.455 0.00 0.00 0.00 4.30
358 378 2.028130 TGTTTGGCGGAACTTGACATT 58.972 42.857 5.37 0.00 0.00 2.71
360 380 1.336440 CATGTTTGGCGGAACTTGACA 59.664 47.619 11.51 0.00 37.03 3.58
368 388 2.481289 TATCACACATGTTTGGCGGA 57.519 45.000 11.92 0.00 0.00 5.54
369 389 2.795681 GCATATCACACATGTTTGGCGG 60.796 50.000 11.92 1.74 0.00 6.13
390 410 3.754850 TGAGATGTGAATGGCAGAAAGTG 59.245 43.478 0.00 0.00 0.00 3.16
391 411 3.755378 GTGAGATGTGAATGGCAGAAAGT 59.245 43.478 0.00 0.00 0.00 2.66
392 412 3.754850 TGTGAGATGTGAATGGCAGAAAG 59.245 43.478 0.00 0.00 0.00 2.62
395 415 3.054948 TGATGTGAGATGTGAATGGCAGA 60.055 43.478 0.00 0.00 0.00 4.26
397 417 3.353370 TGATGTGAGATGTGAATGGCA 57.647 42.857 0.00 0.00 0.00 4.92
483 503 1.165270 GGCGAAACCAACATGCTAGT 58.835 50.000 0.00 0.00 38.86 2.57
484 504 0.451783 GGGCGAAACCAACATGCTAG 59.548 55.000 0.00 0.00 42.05 3.42
485 505 0.250945 TGGGCGAAACCAACATGCTA 60.251 50.000 0.00 0.00 42.05 3.49
486 506 1.112315 TTGGGCGAAACCAACATGCT 61.112 50.000 0.00 0.00 45.19 3.79
487 507 1.365633 TTGGGCGAAACCAACATGC 59.634 52.632 0.00 0.00 45.19 4.06
505 525 4.022329 GGCCAACATGCTAGTACTGTTTTT 60.022 41.667 5.39 0.00 30.99 1.94
506 526 3.506067 GGCCAACATGCTAGTACTGTTTT 59.494 43.478 5.39 0.00 30.99 2.43
507 527 3.081804 GGCCAACATGCTAGTACTGTTT 58.918 45.455 5.39 0.00 30.99 2.83
508 528 2.711542 GGCCAACATGCTAGTACTGTT 58.288 47.619 5.39 0.00 33.55 3.16
509 529 1.405526 CGGCCAACATGCTAGTACTGT 60.406 52.381 5.39 0.00 0.00 3.55
510 530 1.134818 TCGGCCAACATGCTAGTACTG 60.135 52.381 5.39 0.00 0.00 2.74
511 531 1.191535 TCGGCCAACATGCTAGTACT 58.808 50.000 2.24 0.00 0.00 2.73
512 532 2.018542 TTCGGCCAACATGCTAGTAC 57.981 50.000 2.24 0.00 0.00 2.73
513 533 2.027561 ACTTTCGGCCAACATGCTAGTA 60.028 45.455 2.24 0.00 0.00 1.82
514 534 1.271379 ACTTTCGGCCAACATGCTAGT 60.271 47.619 2.24 0.00 0.00 2.57
515 535 1.131126 CACTTTCGGCCAACATGCTAG 59.869 52.381 2.24 0.00 0.00 3.42
516 536 1.164411 CACTTTCGGCCAACATGCTA 58.836 50.000 2.24 0.00 0.00 3.49
517 537 0.537143 TCACTTTCGGCCAACATGCT 60.537 50.000 2.24 0.00 0.00 3.79
518 538 0.313672 TTCACTTTCGGCCAACATGC 59.686 50.000 2.24 0.00 0.00 4.06
519 539 2.607771 CCTTTCACTTTCGGCCAACATG 60.608 50.000 2.24 0.00 0.00 3.21
520 540 1.613437 CCTTTCACTTTCGGCCAACAT 59.387 47.619 2.24 0.00 0.00 2.71
521 541 1.028905 CCTTTCACTTTCGGCCAACA 58.971 50.000 2.24 0.00 0.00 3.33
522 542 0.318699 GCCTTTCACTTTCGGCCAAC 60.319 55.000 2.24 0.00 36.56 3.77
523 543 0.753479 TGCCTTTCACTTTCGGCCAA 60.753 50.000 2.24 0.00 41.80 4.52
524 544 0.539438 ATGCCTTTCACTTTCGGCCA 60.539 50.000 2.24 0.00 41.80 5.36
525 545 0.109132 CATGCCTTTCACTTTCGGCC 60.109 55.000 0.00 0.00 41.80 6.13
526 546 0.881118 TCATGCCTTTCACTTTCGGC 59.119 50.000 0.00 0.00 42.78 5.54
527 547 2.154462 AGTCATGCCTTTCACTTTCGG 58.846 47.619 0.00 0.00 0.00 4.30
528 548 5.122239 TGAATAGTCATGCCTTTCACTTTCG 59.878 40.000 0.00 0.00 0.00 3.46
539 559 2.225467 GCCTTCCTGAATAGTCATGCC 58.775 52.381 0.00 0.00 31.85 4.40
540 560 1.869767 CGCCTTCCTGAATAGTCATGC 59.130 52.381 0.00 0.00 31.85 4.06
551 571 1.339055 TGTGAATCTTCCGCCTTCCTG 60.339 52.381 0.00 0.00 0.00 3.86
556 576 3.071874 TGAAATGTGAATCTTCCGCCT 57.928 42.857 0.00 0.00 0.00 5.52
576 596 5.278169 CCGGAGTGTACGTACTAATAAGCAT 60.278 44.000 25.12 2.29 0.00 3.79
587 607 2.360483 TGAACAAACCGGAGTGTACGTA 59.640 45.455 9.46 0.00 0.00 3.57
595 615 6.415798 AAAACAAATTTGAACAAACCGGAG 57.584 33.333 24.64 0.00 32.51 4.63
619 639 3.016736 CAACCCTATCCGCATCTGTTTT 58.983 45.455 0.00 0.00 0.00 2.43
623 643 0.758734 TCCAACCCTATCCGCATCTG 59.241 55.000 0.00 0.00 0.00 2.90
624 644 1.349026 CATCCAACCCTATCCGCATCT 59.651 52.381 0.00 0.00 0.00 2.90
625 645 1.347707 TCATCCAACCCTATCCGCATC 59.652 52.381 0.00 0.00 0.00 3.91
629 649 0.033504 CGGTCATCCAACCCTATCCG 59.966 60.000 0.00 0.00 35.79 4.18
633 653 1.481871 GAGTCGGTCATCCAACCCTA 58.518 55.000 0.00 0.00 35.79 3.53
640 660 1.038280 AATACGGGAGTCGGTCATCC 58.962 55.000 0.00 0.00 45.66 3.51
645 665 3.416156 GGATACTAATACGGGAGTCGGT 58.584 50.000 0.00 0.00 45.66 4.69
647 667 3.736530 CGGATACTAATACGGGAGTCG 57.263 52.381 0.00 0.00 45.66 4.18
654 674 5.624344 ACTGATGTCCGGATACTAATACG 57.376 43.478 7.81 0.00 39.30 3.06
655 675 6.978338 TCAACTGATGTCCGGATACTAATAC 58.022 40.000 7.81 0.00 0.00 1.89
659 679 5.394883 GGTTTCAACTGATGTCCGGATACTA 60.395 44.000 7.81 0.00 0.00 1.82
664 684 1.606994 CGGTTTCAACTGATGTCCGGA 60.607 52.381 0.00 0.00 37.48 5.14
672 692 4.333095 TGTTCGAAAATCGGTTTCAACTGA 59.667 37.500 0.00 3.67 45.15 3.41
674 694 4.886247 TGTTCGAAAATCGGTTTCAACT 57.114 36.364 0.00 0.00 45.15 3.16
675 695 5.935448 TTTGTTCGAAAATCGGTTTCAAC 57.065 34.783 0.00 7.28 45.15 3.18
676 696 6.357503 CGTATTTGTTCGAAAATCGGTTTCAA 59.642 34.615 0.00 0.00 45.15 2.69
677 697 5.846994 CGTATTTGTTCGAAAATCGGTTTCA 59.153 36.000 0.00 0.00 45.15 2.69
678 698 5.219713 GCGTATTTGTTCGAAAATCGGTTTC 60.220 40.000 0.00 0.00 40.88 2.78
683 703 7.527139 CAAATAGCGTATTTGTTCGAAAATCG 58.473 34.615 0.00 5.01 46.13 3.34
700 720 3.303526 GGCATACCCGTAAACAAATAGCG 60.304 47.826 0.00 0.00 0.00 4.26
701 721 4.219143 GGCATACCCGTAAACAAATAGC 57.781 45.455 0.00 0.00 0.00 2.97
726 757 3.386486 TGTCACGTTGAAGATGTACCAC 58.614 45.455 0.00 0.00 0.00 4.16
734 765 4.211164 CAGTTTGCTATGTCACGTTGAAGA 59.789 41.667 0.00 0.00 0.00 2.87
738 769 2.574322 GCAGTTTGCTATGTCACGTTG 58.426 47.619 0.00 0.00 40.96 4.10
773 804 4.826274 ACTTCCATCTCGGATTTTCTCA 57.174 40.909 0.00 0.00 45.80 3.27
857 888 8.575649 TGAAGGTATTTTTCCAACCTATTCTC 57.424 34.615 0.00 0.00 42.86 2.87
875 906 5.198965 AGCTTCGTACTCCTATTGAAGGTA 58.801 41.667 7.16 0.00 46.62 3.08
884 915 1.099879 GGCCGAGCTTCGTACTCCTA 61.100 60.000 0.00 0.00 38.40 2.94
885 916 2.416432 GGCCGAGCTTCGTACTCCT 61.416 63.158 0.00 0.00 38.40 3.69
886 917 2.104530 GGCCGAGCTTCGTACTCC 59.895 66.667 0.00 0.00 38.40 3.85
887 918 0.802607 CTTGGCCGAGCTTCGTACTC 60.803 60.000 7.18 0.00 38.40 2.59
929 960 2.035832 CCAGGCGTGTTTTCTCCATTTT 59.964 45.455 5.57 0.00 0.00 1.82
930 961 1.613437 CCAGGCGTGTTTTCTCCATTT 59.387 47.619 5.57 0.00 0.00 2.32
931 962 1.202879 TCCAGGCGTGTTTTCTCCATT 60.203 47.619 5.57 0.00 0.00 3.16
1108 1151 1.999051 CGCCTTCTCCGTGATTTCG 59.001 57.895 0.00 0.00 0.00 3.46
1193 1236 2.849646 GGGGATTCGGGGAGAGGG 60.850 72.222 0.00 0.00 0.00 4.30
1198 1241 0.260523 GAAATTGGGGGATTCGGGGA 59.739 55.000 0.00 0.00 0.00 4.81
1199 1242 1.106944 CGAAATTGGGGGATTCGGGG 61.107 60.000 0.00 0.00 41.52 5.73
1206 1249 4.068887 GGGGGCGAAATTGGGGGA 62.069 66.667 0.00 0.00 0.00 4.81
1212 1255 0.474184 ATCAGATCGGGGGCGAAATT 59.526 50.000 0.00 0.00 0.00 1.82
1230 1283 4.814294 GGAACTGGACCGCGCGAT 62.814 66.667 34.63 17.42 0.00 4.58
1327 1380 2.017559 GCCGCGTAGATTCCCTGACT 62.018 60.000 4.92 0.00 0.00 3.41
1331 1384 2.444140 AGGCCGCGTAGATTCCCT 60.444 61.111 4.92 0.00 0.00 4.20
1335 1388 1.153429 GGAACAGGCCGCGTAGATT 60.153 57.895 4.92 0.00 0.00 2.40
1355 1408 0.688087 AGAAGCGAGGAACCCTAGGG 60.688 60.000 27.36 27.36 42.03 3.53
1370 1423 3.919216 ACAAACAGAGATCGGTCAGAAG 58.081 45.455 0.00 0.00 0.00 2.85
1464 1521 0.464036 GATCAGGACACGGTATGCCA 59.536 55.000 0.00 0.00 34.09 4.92
1465 1522 0.753262 AGATCAGGACACGGTATGCC 59.247 55.000 0.00 0.00 0.00 4.40
1495 1552 0.459585 TCAAGACAGGATAACCGCGC 60.460 55.000 0.00 0.00 41.83 6.86
1496 1553 2.128035 GATCAAGACAGGATAACCGCG 58.872 52.381 0.00 0.00 41.83 6.46
1498 1555 3.384789 TCCAGATCAAGACAGGATAACCG 59.615 47.826 0.00 0.00 41.83 4.44
1501 1558 4.343526 GCTCTCCAGATCAAGACAGGATAA 59.656 45.833 0.00 0.00 0.00 1.75
1505 1562 1.202394 CGCTCTCCAGATCAAGACAGG 60.202 57.143 0.00 0.00 0.00 4.00
1521 1578 0.109597 CAGGAAACCACAATGCGCTC 60.110 55.000 9.73 0.00 0.00 5.03
1522 1579 1.959085 CAGGAAACCACAATGCGCT 59.041 52.632 9.73 0.00 0.00 5.92
1524 1581 0.314935 AAGCAGGAAACCACAATGCG 59.685 50.000 0.00 0.00 41.69 4.73
1609 1666 6.169557 TGCTGAAAGTACAGAAGGAACTAA 57.830 37.500 0.00 0.00 39.94 2.24
1610 1667 5.304614 ACTGCTGAAAGTACAGAAGGAACTA 59.695 40.000 0.00 0.00 45.17 2.24
1611 1668 4.101741 ACTGCTGAAAGTACAGAAGGAACT 59.898 41.667 0.00 0.00 45.17 3.01
1612 1669 4.381411 ACTGCTGAAAGTACAGAAGGAAC 58.619 43.478 0.00 0.00 45.17 3.62
1613 1670 4.100963 TGACTGCTGAAAGTACAGAAGGAA 59.899 41.667 0.00 0.00 45.17 3.36
1614 1671 3.641436 TGACTGCTGAAAGTACAGAAGGA 59.359 43.478 0.00 0.00 45.17 3.36
1615 1672 3.995199 TGACTGCTGAAAGTACAGAAGG 58.005 45.455 0.00 0.00 45.17 3.46
1616 1673 6.091441 GGTTATGACTGCTGAAAGTACAGAAG 59.909 42.308 0.00 0.00 46.04 2.85
1617 1674 5.932303 GGTTATGACTGCTGAAAGTACAGAA 59.068 40.000 0.00 0.00 39.94 3.02
1618 1675 5.246203 AGGTTATGACTGCTGAAAGTACAGA 59.754 40.000 0.00 0.00 39.94 3.41
1619 1676 5.482908 AGGTTATGACTGCTGAAAGTACAG 58.517 41.667 0.00 0.00 40.43 2.74
1620 1677 5.483685 AGGTTATGACTGCTGAAAGTACA 57.516 39.130 0.00 0.00 35.30 2.90
1648 1717 3.674997 ACCGAAGCTGACAACACATTAT 58.325 40.909 0.00 0.00 0.00 1.28
1677 1746 1.531423 AGAAATGCAGGTCACAGCAG 58.469 50.000 0.00 0.00 42.60 4.24
1730 1799 2.413963 AATGCATTGGCGGCGCTAA 61.414 52.632 31.87 31.87 45.35 3.09
1853 1922 8.606040 AGTCATTTAACAAACATGGGAAATTG 57.394 30.769 0.00 0.00 0.00 2.32
2060 2133 7.600065 TGCTATCTGTAGTAAACGAGAAAAGT 58.400 34.615 0.00 0.00 0.00 2.66
2092 2165 0.767375 TTCTCTTCTGCCTTGCCAGT 59.233 50.000 0.00 0.00 34.47 4.00
2110 2183 6.312426 TCAATTTTCACGAAAACTTGCACATT 59.688 30.769 7.09 0.00 42.32 2.71
2127 2200 8.345565 AGCATAATCCTTGTATCGTCAATTTTC 58.654 33.333 0.00 0.00 0.00 2.29
2210 2283 0.312102 GTGCAACAGCTCAAACTCCC 59.688 55.000 0.00 0.00 36.32 4.30
2366 2439 6.691754 AGTACATGAGTGAGATGTGACTAG 57.308 41.667 0.00 0.00 35.62 2.57
2596 2669 5.009310 GCAAATCCATGAAGCAGATACATCA 59.991 40.000 0.00 0.00 0.00 3.07
2610 2683 6.932356 ACTTACTAGACATGCAAATCCATG 57.068 37.500 0.00 0.94 46.19 3.66
2612 2685 7.064134 CGTAAACTTACTAGACATGCAAATCCA 59.936 37.037 0.00 0.00 0.00 3.41
2613 2686 7.064253 ACGTAAACTTACTAGACATGCAAATCC 59.936 37.037 0.00 0.00 0.00 3.01
2621 2694 6.752168 ACCACAACGTAAACTTACTAGACAT 58.248 36.000 0.00 0.00 0.00 3.06
2637 2710 2.798145 GCAAAGAGGGAAAACCACAACG 60.798 50.000 0.00 0.00 43.89 4.10
2644 2717 3.819564 ACAAAGGCAAAGAGGGAAAAC 57.180 42.857 0.00 0.00 0.00 2.43
2651 2724 6.808008 TCATTCTAGAACAAAGGCAAAGAG 57.192 37.500 7.48 0.00 0.00 2.85
2654 2727 7.551585 TGTTTTCATTCTAGAACAAAGGCAAA 58.448 30.769 7.48 0.00 0.00 3.68
2658 2731 7.147312 TGCATGTTTTCATTCTAGAACAAAGG 58.853 34.615 7.48 3.35 38.64 3.11
2683 2756 3.390639 TCAAACATGCCAAGGGTCAATTT 59.609 39.130 0.00 0.00 0.00 1.82
2767 2844 1.077501 GCATCAGCAGGCCTTGGTA 60.078 57.895 0.00 0.00 41.58 3.25
2793 2870 6.318900 CCTTCAACTTTAGCCTTTGGTATAGG 59.681 42.308 0.00 0.00 35.80 2.57
2816 2893 4.336280 GCTTTCCAGGACTATTTGTTCCT 58.664 43.478 0.00 0.00 0.00 3.36
2839 2916 8.214364 AGATACAAACCTTATCATCTCCCTTTC 58.786 37.037 0.00 0.00 0.00 2.62
2886 2963 3.343617 ACAACAGTTCCATCATAACCCG 58.656 45.455 0.00 0.00 0.00 5.28
2948 3025 0.606401 ACCAACATTCTCCCTGCACG 60.606 55.000 0.00 0.00 0.00 5.34
3019 3096 7.599998 AGAAAAACTGTCAAAATGGATGCATAC 59.400 33.333 0.42 0.42 0.00 2.39
3146 3223 0.613260 TGGGCTGCTACAACCTACAG 59.387 55.000 0.00 0.00 0.00 2.74
3147 3224 1.060729 TTGGGCTGCTACAACCTACA 58.939 50.000 0.00 0.00 0.00 2.74
3148 3225 2.289565 GATTGGGCTGCTACAACCTAC 58.710 52.381 11.30 2.94 0.00 3.18
3149 3226 1.912731 TGATTGGGCTGCTACAACCTA 59.087 47.619 11.30 0.00 0.00 3.08
3150 3227 0.698238 TGATTGGGCTGCTACAACCT 59.302 50.000 11.30 0.00 0.00 3.50
3151 3228 1.767759 ATGATTGGGCTGCTACAACC 58.232 50.000 11.30 4.22 0.00 3.77
3152 3229 2.493278 ACAATGATTGGGCTGCTACAAC 59.507 45.455 10.27 7.46 34.12 3.32
3170 3247 8.701895 CAACAAAGTATATACTCCCTAGGACAA 58.298 37.037 15.72 0.00 34.99 3.18
3278 3356 0.379669 GCCATCACTGGAATTCTGCG 59.620 55.000 5.23 0.00 46.37 5.18
3364 3442 5.314923 TGAGAAGGCATCAAAATAACAGC 57.685 39.130 0.00 0.00 0.00 4.40
3440 3518 8.281531 AGAGGTGTTTCCATTGGATTATAATCA 58.718 33.333 23.54 7.71 36.53 2.57
3520 3598 7.440523 AATAAAGATCACTTCACACCAGTTC 57.559 36.000 0.00 0.00 35.05 3.01
3722 3947 2.354805 GGACATGGTCACCTGACTTACC 60.355 54.545 5.44 0.00 44.20 2.85
3745 3970 3.458163 GGATGAGGGGTCGCGACA 61.458 66.667 37.26 19.58 0.00 4.35
4141 4488 0.454600 TAAGCTAACACCTCGCTCGG 59.545 55.000 0.00 0.00 32.70 4.63
4146 4493 1.134788 CACCCCTAAGCTAACACCTCG 60.135 57.143 0.00 0.00 0.00 4.63
4165 4512 3.256383 CCAAATTCAGTTCACCAGCATCA 59.744 43.478 0.00 0.00 0.00 3.07
4199 4546 4.363999 CGACCTCTTTACACATCATCTCC 58.636 47.826 0.00 0.00 0.00 3.71
4282 4630 0.321298 GCACACCAACACCGGTCTAT 60.321 55.000 2.59 0.00 37.07 1.98
4330 4678 1.061905 TGATTCCAGGATCCCGGCAT 61.062 55.000 9.41 3.67 0.00 4.40
4377 4725 8.482429 CAAAAGAATGTTTATCAACAAGACAGC 58.518 33.333 0.00 0.00 46.17 4.40
4420 4768 5.124457 ACTTACAAGCATGATGAATCACCAC 59.876 40.000 0.00 0.00 40.03 4.16
4499 4858 3.366374 GCTCAAAGTCCATTTACAGCACC 60.366 47.826 0.00 0.00 36.57 5.01
4500 4859 3.503748 AGCTCAAAGTCCATTTACAGCAC 59.496 43.478 0.00 0.00 37.99 4.40
4501 4860 3.503363 CAGCTCAAAGTCCATTTACAGCA 59.497 43.478 0.00 0.00 37.99 4.41
4502 4861 3.753272 TCAGCTCAAAGTCCATTTACAGC 59.247 43.478 0.00 0.00 36.71 4.40
4503 4862 4.756642 TGTCAGCTCAAAGTCCATTTACAG 59.243 41.667 0.00 0.00 0.00 2.74
4504 4863 4.713553 TGTCAGCTCAAAGTCCATTTACA 58.286 39.130 0.00 0.00 0.00 2.41
4505 4864 4.378874 GCTGTCAGCTCAAAGTCCATTTAC 60.379 45.833 17.89 0.00 38.45 2.01
4506 4865 3.753272 GCTGTCAGCTCAAAGTCCATTTA 59.247 43.478 17.89 0.00 38.45 1.40
4507 4866 2.555757 GCTGTCAGCTCAAAGTCCATTT 59.444 45.455 17.89 0.00 38.45 2.32
4550 5021 1.417517 TGTGATCTTCCATGCCGCTAT 59.582 47.619 0.00 0.00 0.00 2.97
4559 5030 1.629861 TCAGTGCCATGTGATCTTCCA 59.370 47.619 0.00 0.00 0.00 3.53
4573 5044 4.244425 TCAAGTACTTGAGTCTCAGTGC 57.756 45.455 30.07 7.38 43.90 4.40
4663 5147 3.818787 GCTGTCATGGGCAAGGCG 61.819 66.667 0.00 0.00 0.00 5.52
4670 5154 2.046023 TCCGCAAGCTGTCATGGG 60.046 61.111 0.00 0.00 0.00 4.00
4685 5169 1.512926 AGTGTTGTTCATCAGCGTCC 58.487 50.000 0.00 0.00 0.00 4.79
4689 5173 4.153117 CAGGTTCTAGTGTTGTTCATCAGC 59.847 45.833 0.00 0.00 0.00 4.26
4692 5176 4.894784 TCCAGGTTCTAGTGTTGTTCATC 58.105 43.478 0.00 0.00 0.00 2.92
4700 5184 1.834263 GCATCCTCCAGGTTCTAGTGT 59.166 52.381 0.00 0.00 36.34 3.55
4701 5185 1.833630 TGCATCCTCCAGGTTCTAGTG 59.166 52.381 0.00 0.00 36.34 2.74
4706 5190 1.450312 CCGTGCATCCTCCAGGTTC 60.450 63.158 0.00 0.00 36.34 3.62
4707 5191 2.671070 CCGTGCATCCTCCAGGTT 59.329 61.111 0.00 0.00 36.34 3.50
4708 5192 4.101448 GCCGTGCATCCTCCAGGT 62.101 66.667 0.00 0.00 36.34 4.00
4709 5193 3.790437 AGCCGTGCATCCTCCAGG 61.790 66.667 0.00 0.00 0.00 4.45
4711 5195 2.315781 GATCAGCCGTGCATCCTCCA 62.316 60.000 0.00 0.00 0.00 3.86
4717 5201 2.515523 GCAGGATCAGCCGTGCAT 60.516 61.111 0.00 0.00 43.43 3.96
4747 5253 2.177531 CAACGATGGCAGCAGCAC 59.822 61.111 2.73 0.00 44.61 4.40
4804 5310 2.532843 TCACACAAGAGTACCCCTACC 58.467 52.381 0.00 0.00 0.00 3.18
4812 5318 1.335597 CGCGACCTTCACACAAGAGTA 60.336 52.381 0.00 0.00 0.00 2.59
4813 5319 0.597637 CGCGACCTTCACACAAGAGT 60.598 55.000 0.00 0.00 0.00 3.24
4814 5320 0.318699 TCGCGACCTTCACACAAGAG 60.319 55.000 3.71 0.00 0.00 2.85
4815 5321 0.103390 TTCGCGACCTTCACACAAGA 59.897 50.000 9.15 0.00 0.00 3.02
4816 5322 0.934496 TTTCGCGACCTTCACACAAG 59.066 50.000 9.15 0.00 0.00 3.16
4817 5323 0.653636 GTTTCGCGACCTTCACACAA 59.346 50.000 9.15 0.00 0.00 3.33
4819 5325 0.653636 TTGTTTCGCGACCTTCACAC 59.346 50.000 9.15 0.00 0.00 3.82
4820 5326 0.934496 CTTGTTTCGCGACCTTCACA 59.066 50.000 9.15 4.11 0.00 3.58
4821 5327 1.214367 TCTTGTTTCGCGACCTTCAC 58.786 50.000 9.15 1.13 0.00 3.18
4826 5340 2.839474 CTTTGATCTTGTTTCGCGACC 58.161 47.619 9.15 2.51 0.00 4.79
4828 5342 1.870402 TGCTTTGATCTTGTTTCGCGA 59.130 42.857 3.71 3.71 0.00 5.87
4831 5345 5.121298 TCTCTCATGCTTTGATCTTGTTTCG 59.879 40.000 0.00 0.00 32.72 3.46
4847 5361 2.587194 CCCGCGCCTTCTCTCATG 60.587 66.667 0.00 0.00 0.00 3.07
4848 5362 2.185310 AAACCCGCGCCTTCTCTCAT 62.185 55.000 0.00 0.00 0.00 2.90
4849 5363 2.879233 AAACCCGCGCCTTCTCTCA 61.879 57.895 0.00 0.00 0.00 3.27
4859 5374 0.589223 TAGTGAAAAGCAAACCCGCG 59.411 50.000 0.00 0.00 36.85 6.46
4863 5378 4.846779 TGGTGATAGTGAAAAGCAAACC 57.153 40.909 0.00 0.00 0.00 3.27
4864 5379 4.681483 GCTTGGTGATAGTGAAAAGCAAAC 59.319 41.667 0.00 0.00 39.76 2.93
4865 5380 4.340666 TGCTTGGTGATAGTGAAAAGCAAA 59.659 37.500 5.49 0.00 44.96 3.68
4866 5381 3.888323 TGCTTGGTGATAGTGAAAAGCAA 59.112 39.130 5.49 0.00 44.96 3.91
4867 5382 3.253188 GTGCTTGGTGATAGTGAAAAGCA 59.747 43.478 3.91 3.91 45.53 3.91
4868 5383 3.366374 GGTGCTTGGTGATAGTGAAAAGC 60.366 47.826 0.00 0.00 40.27 3.51
4870 5385 3.820467 CAGGTGCTTGGTGATAGTGAAAA 59.180 43.478 0.00 0.00 0.00 2.29
4871 5386 3.072330 TCAGGTGCTTGGTGATAGTGAAA 59.928 43.478 0.00 0.00 0.00 2.69
4902 5426 4.950205 TGTTAGACTTCGTTTCTTCCCT 57.050 40.909 0.00 0.00 0.00 4.20
4906 5430 5.992217 AGCTGATTGTTAGACTTCGTTTCTT 59.008 36.000 0.00 0.00 0.00 2.52
4908 5432 5.847670 AGCTGATTGTTAGACTTCGTTTC 57.152 39.130 0.00 0.00 0.00 2.78
4909 5433 7.148407 CCATAAGCTGATTGTTAGACTTCGTTT 60.148 37.037 0.00 0.00 0.00 3.60
4912 5436 5.812642 ACCATAAGCTGATTGTTAGACTTCG 59.187 40.000 0.00 0.00 0.00 3.79
4913 5437 7.617041 AACCATAAGCTGATTGTTAGACTTC 57.383 36.000 0.00 0.00 0.00 3.01
4914 5438 7.277981 CGTAACCATAAGCTGATTGTTAGACTT 59.722 37.037 7.80 0.00 0.00 3.01
4916 5440 6.534079 ACGTAACCATAAGCTGATTGTTAGAC 59.466 38.462 7.80 0.69 0.00 2.59
4917 5441 6.636705 ACGTAACCATAAGCTGATTGTTAGA 58.363 36.000 7.80 0.00 0.00 2.10
4918 5442 6.533723 TGACGTAACCATAAGCTGATTGTTAG 59.466 38.462 7.80 5.79 0.00 2.34
4920 5444 5.121768 GTGACGTAACCATAAGCTGATTGTT 59.878 40.000 5.85 5.85 0.00 2.83
4921 5445 4.630069 GTGACGTAACCATAAGCTGATTGT 59.370 41.667 0.00 0.00 0.00 2.71
4922 5446 4.259810 CGTGACGTAACCATAAGCTGATTG 60.260 45.833 0.00 0.00 0.00 2.67
4925 5449 2.416296 CCGTGACGTAACCATAAGCTGA 60.416 50.000 3.64 0.00 0.00 4.26
4926 5450 1.924524 CCGTGACGTAACCATAAGCTG 59.075 52.381 3.64 0.00 0.00 4.24
4927 5451 1.134907 CCCGTGACGTAACCATAAGCT 60.135 52.381 3.64 0.00 0.00 3.74
4928 5452 1.283736 CCCGTGACGTAACCATAAGC 58.716 55.000 3.64 0.00 0.00 3.09
4929 5453 1.283736 GCCCGTGACGTAACCATAAG 58.716 55.000 3.64 0.00 0.00 1.73
4930 5454 0.458197 CGCCCGTGACGTAACCATAA 60.458 55.000 3.64 0.00 0.00 1.90
4931 5455 1.139308 CGCCCGTGACGTAACCATA 59.861 57.895 3.64 0.00 0.00 2.74
4932 5456 2.125832 CGCCCGTGACGTAACCAT 60.126 61.111 3.64 0.00 0.00 3.55
4933 5457 2.157305 ATTCGCCCGTGACGTAACCA 62.157 55.000 3.64 0.00 0.00 3.67
4934 5458 1.446618 ATTCGCCCGTGACGTAACC 60.447 57.895 3.64 0.00 0.00 2.85
4935 5459 1.705727 CATTCGCCCGTGACGTAAC 59.294 57.895 3.64 0.00 0.00 2.50
4936 5460 2.095847 GCATTCGCCCGTGACGTAA 61.096 57.895 3.64 0.00 0.00 3.18
4937 5461 2.507547 GCATTCGCCCGTGACGTA 60.508 61.111 3.64 0.00 0.00 3.57
4938 5462 4.373116 AGCATTCGCCCGTGACGT 62.373 61.111 3.64 0.00 39.83 4.34
4939 5463 3.853330 CAGCATTCGCCCGTGACG 61.853 66.667 0.00 0.00 39.83 4.35
4940 5464 4.166011 GCAGCATTCGCCCGTGAC 62.166 66.667 0.00 0.00 39.83 3.67
4941 5465 4.393155 AGCAGCATTCGCCCGTGA 62.393 61.111 0.00 0.00 39.83 4.35
4942 5466 4.170062 CAGCAGCATTCGCCCGTG 62.170 66.667 0.00 0.00 39.83 4.94
4945 5469 3.207669 CTCCAGCAGCATTCGCCC 61.208 66.667 0.00 0.00 39.83 6.13
4946 5470 2.437359 ACTCCAGCAGCATTCGCC 60.437 61.111 0.00 0.00 39.83 5.54
4947 5471 2.758089 CCACTCCAGCAGCATTCGC 61.758 63.158 0.00 0.00 38.99 4.70
4948 5472 2.110967 CCCACTCCAGCAGCATTCG 61.111 63.158 0.00 0.00 0.00 3.34
4949 5473 0.322816 TTCCCACTCCAGCAGCATTC 60.323 55.000 0.00 0.00 0.00 2.67
4950 5474 0.112995 TTTCCCACTCCAGCAGCATT 59.887 50.000 0.00 0.00 0.00 3.56
4951 5475 0.323178 CTTTCCCACTCCAGCAGCAT 60.323 55.000 0.00 0.00 0.00 3.79
4952 5476 1.073722 CTTTCCCACTCCAGCAGCA 59.926 57.895 0.00 0.00 0.00 4.41
4953 5477 1.073897 ACTTTCCCACTCCAGCAGC 59.926 57.895 0.00 0.00 0.00 5.25
4954 5478 0.109342 ACACTTTCCCACTCCAGCAG 59.891 55.000 0.00 0.00 0.00 4.24
4955 5479 0.550914 AACACTTTCCCACTCCAGCA 59.449 50.000 0.00 0.00 0.00 4.41
4956 5480 2.561478 TAACACTTTCCCACTCCAGC 57.439 50.000 0.00 0.00 0.00 4.85
4957 5481 2.814336 GCTTAACACTTTCCCACTCCAG 59.186 50.000 0.00 0.00 0.00 3.86
4958 5482 2.808933 CGCTTAACACTTTCCCACTCCA 60.809 50.000 0.00 0.00 0.00 3.86
4959 5483 1.804748 CGCTTAACACTTTCCCACTCC 59.195 52.381 0.00 0.00 0.00 3.85
4960 5484 1.804748 CCGCTTAACACTTTCCCACTC 59.195 52.381 0.00 0.00 0.00 3.51
4961 5485 1.418637 TCCGCTTAACACTTTCCCACT 59.581 47.619 0.00 0.00 0.00 4.00
4962 5486 1.534163 GTCCGCTTAACACTTTCCCAC 59.466 52.381 0.00 0.00 0.00 4.61
4963 5487 1.874739 CGTCCGCTTAACACTTTCCCA 60.875 52.381 0.00 0.00 0.00 4.37
4964 5488 0.794473 CGTCCGCTTAACACTTTCCC 59.206 55.000 0.00 0.00 0.00 3.97
4965 5489 0.165295 GCGTCCGCTTAACACTTTCC 59.835 55.000 4.10 0.00 38.26 3.13
4966 5490 0.165295 GGCGTCCGCTTAACACTTTC 59.835 55.000 11.82 0.00 41.60 2.62
4967 5491 0.533308 TGGCGTCCGCTTAACACTTT 60.533 50.000 11.82 0.00 41.60 2.66
4968 5492 0.321298 ATGGCGTCCGCTTAACACTT 60.321 50.000 11.82 0.00 41.60 3.16
4969 5493 1.019278 CATGGCGTCCGCTTAACACT 61.019 55.000 11.82 0.00 41.60 3.55
4970 5494 1.017177 TCATGGCGTCCGCTTAACAC 61.017 55.000 11.82 0.00 41.60 3.32
4971 5495 1.017177 GTCATGGCGTCCGCTTAACA 61.017 55.000 11.82 1.23 41.60 2.41
4972 5496 0.739813 AGTCATGGCGTCCGCTTAAC 60.740 55.000 11.82 5.47 41.60 2.01
4973 5497 0.036765 AAGTCATGGCGTCCGCTTAA 60.037 50.000 11.82 0.00 41.60 1.85
4974 5498 0.739462 CAAGTCATGGCGTCCGCTTA 60.739 55.000 11.82 1.78 41.60 3.09
4975 5499 2.034879 CAAGTCATGGCGTCCGCTT 61.035 57.895 11.82 0.00 41.60 4.68
4976 5500 2.434884 CAAGTCATGGCGTCCGCT 60.435 61.111 11.82 0.00 41.60 5.52
4977 5501 1.852067 AAACAAGTCATGGCGTCCGC 61.852 55.000 2.45 2.45 41.06 5.54
4978 5502 0.591170 AAAACAAGTCATGGCGTCCG 59.409 50.000 0.00 0.00 0.00 4.79
4979 5503 1.336755 ACAAAACAAGTCATGGCGTCC 59.663 47.619 0.00 0.00 0.00 4.79
4980 5504 2.774439 ACAAAACAAGTCATGGCGTC 57.226 45.000 0.00 0.00 0.00 5.19
4981 5505 2.808244 CAACAAAACAAGTCATGGCGT 58.192 42.857 0.00 0.00 0.00 5.68
4982 5506 1.522258 GCAACAAAACAAGTCATGGCG 59.478 47.619 0.00 0.00 0.00 5.69
4983 5507 1.522258 CGCAACAAAACAAGTCATGGC 59.478 47.619 0.00 0.00 0.00 4.40
4984 5508 3.077229 TCGCAACAAAACAAGTCATGG 57.923 42.857 0.00 0.00 0.00 3.66
4985 5509 4.739228 TCAATCGCAACAAAACAAGTCATG 59.261 37.500 0.00 0.00 0.00 3.07
4986 5510 4.930963 TCAATCGCAACAAAACAAGTCAT 58.069 34.783 0.00 0.00 0.00 3.06
4987 5511 4.362932 TCAATCGCAACAAAACAAGTCA 57.637 36.364 0.00 0.00 0.00 3.41
4988 5512 4.148696 CCATCAATCGCAACAAAACAAGTC 59.851 41.667 0.00 0.00 0.00 3.01
4989 5513 4.050553 CCATCAATCGCAACAAAACAAGT 58.949 39.130 0.00 0.00 0.00 3.16
4990 5514 3.429543 CCCATCAATCGCAACAAAACAAG 59.570 43.478 0.00 0.00 0.00 3.16
4991 5515 3.388308 CCCATCAATCGCAACAAAACAA 58.612 40.909 0.00 0.00 0.00 2.83
4992 5516 2.288702 CCCCATCAATCGCAACAAAACA 60.289 45.455 0.00 0.00 0.00 2.83
4993 5517 2.336667 CCCCATCAATCGCAACAAAAC 58.663 47.619 0.00 0.00 0.00 2.43
4994 5518 1.337635 GCCCCATCAATCGCAACAAAA 60.338 47.619 0.00 0.00 0.00 2.44
4995 5519 0.246086 GCCCCATCAATCGCAACAAA 59.754 50.000 0.00 0.00 0.00 2.83
4996 5520 1.889454 GCCCCATCAATCGCAACAA 59.111 52.632 0.00 0.00 0.00 2.83
4997 5521 2.405805 CGCCCCATCAATCGCAACA 61.406 57.895 0.00 0.00 0.00 3.33
4998 5522 2.408835 CGCCCCATCAATCGCAAC 59.591 61.111 0.00 0.00 0.00 4.17
4999 5523 2.828095 CCGCCCCATCAATCGCAA 60.828 61.111 0.00 0.00 0.00 4.85
5022 5546 1.078426 GTGACCCGATGAACCCCAG 60.078 63.158 0.00 0.00 0.00 4.45
5023 5547 2.949909 CGTGACCCGATGAACCCCA 61.950 63.158 0.00 0.00 39.56 4.96
5024 5548 2.125269 CGTGACCCGATGAACCCC 60.125 66.667 0.00 0.00 39.56 4.95
5045 5570 2.185608 GGCGAGGGCTTCAGACTC 59.814 66.667 0.00 0.00 39.81 3.36
5046 5571 2.284258 AGGCGAGGGCTTCAGACT 60.284 61.111 0.00 0.00 39.81 3.24
5047 5572 2.125350 CAGGCGAGGGCTTCAGAC 60.125 66.667 0.00 0.00 35.88 3.51
5048 5573 3.393970 CCAGGCGAGGGCTTCAGA 61.394 66.667 0.00 0.00 35.88 3.27
5049 5574 3.710722 ACCAGGCGAGGGCTTCAG 61.711 66.667 0.00 0.00 35.88 3.02
5050 5575 4.020617 CACCAGGCGAGGGCTTCA 62.021 66.667 0.00 0.00 35.88 3.02
5062 5587 1.673665 GAGTTGAGGCCTGCACCAG 60.674 63.158 12.00 0.00 0.00 4.00
5063 5588 1.708993 AAGAGTTGAGGCCTGCACCA 61.709 55.000 12.00 0.00 0.00 4.17
5064 5589 1.073897 AAGAGTTGAGGCCTGCACC 59.926 57.895 12.00 0.00 0.00 5.01
5065 5590 0.250467 TCAAGAGTTGAGGCCTGCAC 60.250 55.000 12.00 6.36 34.08 4.57
5066 5591 2.144952 TCAAGAGTTGAGGCCTGCA 58.855 52.632 12.00 5.19 34.08 4.41
5074 5599 4.562347 GCCTGTCAGAATCTCAAGAGTTGA 60.562 45.833 0.00 0.00 38.17 3.18
5075 5600 3.683822 GCCTGTCAGAATCTCAAGAGTTG 59.316 47.826 0.00 0.00 0.00 3.16
5076 5601 3.326006 TGCCTGTCAGAATCTCAAGAGTT 59.674 43.478 0.00 0.00 0.00 3.01
5077 5602 2.902486 TGCCTGTCAGAATCTCAAGAGT 59.098 45.455 0.00 0.00 0.00 3.24
5078 5603 3.523547 CTGCCTGTCAGAATCTCAAGAG 58.476 50.000 0.00 0.00 45.72 2.85
5079 5604 3.606595 CTGCCTGTCAGAATCTCAAGA 57.393 47.619 0.00 0.00 45.72 3.02
5118 5643 1.072173 TGCAGTTGCTTCTAGCCTCAA 59.928 47.619 5.62 0.00 41.51 3.02
5148 5673 1.153549 GACAGCGGAGGACACATCC 60.154 63.158 0.00 0.00 46.69 3.51
5149 5674 0.459237 CAGACAGCGGAGGACACATC 60.459 60.000 0.00 0.00 0.00 3.06
5150 5675 1.593787 CAGACAGCGGAGGACACAT 59.406 57.895 0.00 0.00 0.00 3.21
5151 5676 2.574018 CCAGACAGCGGAGGACACA 61.574 63.158 0.00 0.00 0.00 3.72
5152 5677 1.608717 ATCCAGACAGCGGAGGACAC 61.609 60.000 0.00 0.00 35.56 3.67
5153 5678 0.904865 AATCCAGACAGCGGAGGACA 60.905 55.000 0.00 0.00 35.56 4.02
5154 5679 1.112113 TAATCCAGACAGCGGAGGAC 58.888 55.000 0.00 0.00 35.56 3.85
5155 5680 1.757118 CTTAATCCAGACAGCGGAGGA 59.243 52.381 0.00 0.00 35.56 3.71
5156 5681 1.808133 GCTTAATCCAGACAGCGGAGG 60.808 57.143 0.00 0.00 35.56 4.30
5157 5682 1.134699 TGCTTAATCCAGACAGCGGAG 60.135 52.381 0.00 0.00 35.56 4.63
5158 5683 0.901827 TGCTTAATCCAGACAGCGGA 59.098 50.000 0.00 0.00 34.82 5.54
5159 5684 1.009829 GTGCTTAATCCAGACAGCGG 58.990 55.000 0.00 0.00 34.82 5.52
5160 5685 1.725641 TGTGCTTAATCCAGACAGCG 58.274 50.000 0.00 0.00 34.82 5.18
5161 5686 2.223433 GCATGTGCTTAATCCAGACAGC 60.223 50.000 0.00 0.00 38.21 4.40
5162 5687 2.357009 GGCATGTGCTTAATCCAGACAG 59.643 50.000 4.84 0.00 41.70 3.51
5163 5688 2.368439 GGCATGTGCTTAATCCAGACA 58.632 47.619 4.84 0.00 41.70 3.41
5164 5689 1.331756 CGGCATGTGCTTAATCCAGAC 59.668 52.381 4.84 0.00 41.70 3.51
5165 5690 1.667236 CGGCATGTGCTTAATCCAGA 58.333 50.000 4.84 0.00 41.70 3.86
5166 5691 0.664761 CCGGCATGTGCTTAATCCAG 59.335 55.000 4.84 0.00 41.70 3.86
5167 5692 0.751277 CCCGGCATGTGCTTAATCCA 60.751 55.000 0.00 0.00 41.70 3.41
5168 5693 2.032981 CCCGGCATGTGCTTAATCC 58.967 57.895 0.00 0.00 41.70 3.01
5169 5694 1.103398 AGCCCGGCATGTGCTTAATC 61.103 55.000 13.15 0.00 41.70 1.75
5170 5695 0.684153 AAGCCCGGCATGTGCTTAAT 60.684 50.000 13.15 0.00 43.14 1.40
5171 5696 0.897863 AAAGCCCGGCATGTGCTTAA 60.898 50.000 13.15 0.00 44.11 1.85
5172 5697 1.304052 AAAGCCCGGCATGTGCTTA 60.304 52.632 13.15 0.00 44.11 3.09
5173 5698 2.601367 AAAGCCCGGCATGTGCTT 60.601 55.556 13.15 8.85 46.68 3.91
5174 5699 3.376078 CAAAGCCCGGCATGTGCT 61.376 61.111 13.15 0.00 41.70 4.40
5175 5700 2.713927 AAACAAAGCCCGGCATGTGC 62.714 55.000 18.44 0.00 41.14 4.57
5176 5701 0.249826 AAAACAAAGCCCGGCATGTG 60.250 50.000 18.44 12.17 32.77 3.21
5177 5702 0.467804 AAAAACAAAGCCCGGCATGT 59.532 45.000 13.15 13.36 33.56 3.21
5178 5703 2.336667 CTAAAAACAAAGCCCGGCATG 58.663 47.619 13.15 12.68 0.00 4.06
5179 5704 1.275010 CCTAAAAACAAAGCCCGGCAT 59.725 47.619 13.15 0.00 0.00 4.40
5180 5705 0.676736 CCTAAAAACAAAGCCCGGCA 59.323 50.000 13.15 0.00 0.00 5.69
5181 5706 0.677288 ACCTAAAAACAAAGCCCGGC 59.323 50.000 0.00 0.00 0.00 6.13
5182 5707 3.127589 CAAACCTAAAAACAAAGCCCGG 58.872 45.455 0.00 0.00 0.00 5.73
5183 5708 3.127589 CCAAACCTAAAAACAAAGCCCG 58.872 45.455 0.00 0.00 0.00 6.13
5184 5709 4.145365 ACCAAACCTAAAAACAAAGCCC 57.855 40.909 0.00 0.00 0.00 5.19
5185 5710 4.201871 GCAACCAAACCTAAAAACAAAGCC 60.202 41.667 0.00 0.00 0.00 4.35
5186 5711 4.201871 GGCAACCAAACCTAAAAACAAAGC 60.202 41.667 0.00 0.00 0.00 3.51
5187 5712 4.938226 TGGCAACCAAACCTAAAAACAAAG 59.062 37.500 0.00 0.00 0.00 2.77
5188 5713 4.906618 TGGCAACCAAACCTAAAAACAAA 58.093 34.783 0.00 0.00 0.00 2.83
5189 5714 4.508662 CTGGCAACCAAACCTAAAAACAA 58.491 39.130 0.00 0.00 30.80 2.83
5190 5715 3.680196 GCTGGCAACCAAACCTAAAAACA 60.680 43.478 0.00 0.00 30.80 2.83
5191 5716 2.869801 GCTGGCAACCAAACCTAAAAAC 59.130 45.455 0.00 0.00 30.80 2.43
5192 5717 2.482142 CGCTGGCAACCAAACCTAAAAA 60.482 45.455 0.00 0.00 30.80 1.94
5193 5718 1.067821 CGCTGGCAACCAAACCTAAAA 59.932 47.619 0.00 0.00 30.80 1.52
5194 5719 0.671251 CGCTGGCAACCAAACCTAAA 59.329 50.000 0.00 0.00 30.80 1.85
5195 5720 0.179015 TCGCTGGCAACCAAACCTAA 60.179 50.000 0.00 0.00 30.80 2.69
5196 5721 0.037590 ATCGCTGGCAACCAAACCTA 59.962 50.000 0.00 0.00 30.80 3.08
5197 5722 0.827507 AATCGCTGGCAACCAAACCT 60.828 50.000 0.00 0.00 30.80 3.50
5198 5723 0.388520 GAATCGCTGGCAACCAAACC 60.389 55.000 0.00 0.00 30.80 3.27
5199 5724 0.598065 AGAATCGCTGGCAACCAAAC 59.402 50.000 0.00 0.00 30.80 2.93
5200 5725 0.597568 CAGAATCGCTGGCAACCAAA 59.402 50.000 0.00 0.00 41.07 3.28
5201 5726 1.865788 GCAGAATCGCTGGCAACCAA 61.866 55.000 0.00 0.00 45.03 3.67
5202 5727 2.334946 GCAGAATCGCTGGCAACCA 61.335 57.895 0.00 0.00 45.03 3.67
5203 5728 2.486966 GCAGAATCGCTGGCAACC 59.513 61.111 0.00 0.00 45.03 3.77
5212 5737 0.238289 AAACTGTTGCGGCAGAATCG 59.762 50.000 13.27 0.00 39.62 3.34
5213 5738 1.266718 TGAAACTGTTGCGGCAGAATC 59.733 47.619 13.27 10.63 39.62 2.52
5214 5739 1.267806 CTGAAACTGTTGCGGCAGAAT 59.732 47.619 13.27 2.72 39.62 2.40
5215 5740 0.662619 CTGAAACTGTTGCGGCAGAA 59.337 50.000 13.27 0.00 39.62 3.02
5216 5741 1.165907 CCTGAAACTGTTGCGGCAGA 61.166 55.000 13.27 0.00 39.62 4.26
5217 5742 1.283793 CCTGAAACTGTTGCGGCAG 59.716 57.895 1.67 5.88 41.92 4.85
5218 5743 1.034838 AACCTGAAACTGTTGCGGCA 61.035 50.000 0.00 0.00 0.00 5.69
5219 5744 0.948678 TAACCTGAAACTGTTGCGGC 59.051 50.000 1.49 0.00 0.00 6.53
5220 5745 3.564511 CATTAACCTGAAACTGTTGCGG 58.435 45.455 0.00 0.00 0.00 5.69
5221 5746 3.252215 TCCATTAACCTGAAACTGTTGCG 59.748 43.478 0.00 0.00 0.00 4.85
5222 5747 4.846779 TCCATTAACCTGAAACTGTTGC 57.153 40.909 0.00 0.00 0.00 4.17
5223 5748 6.697019 CACTTTCCATTAACCTGAAACTGTTG 59.303 38.462 0.00 0.00 0.00 3.33
5224 5749 6.379988 ACACTTTCCATTAACCTGAAACTGTT 59.620 34.615 0.00 0.00 27.71 3.16
5225 5750 5.891551 ACACTTTCCATTAACCTGAAACTGT 59.108 36.000 0.00 0.00 0.00 3.55
5226 5751 6.391227 ACACTTTCCATTAACCTGAAACTG 57.609 37.500 0.00 0.00 0.00 3.16
5227 5752 7.418337 AAACACTTTCCATTAACCTGAAACT 57.582 32.000 0.00 0.00 0.00 2.66
5228 5753 8.126871 GAAAACACTTTCCATTAACCTGAAAC 57.873 34.615 0.00 0.00 35.80 2.78
5297 5822 8.141909 GCAGGTAGTAAAGAAAAGGAAAACATT 58.858 33.333 0.00 0.00 0.00 2.71
5298 5823 7.505923 AGCAGGTAGTAAAGAAAAGGAAAACAT 59.494 33.333 0.00 0.00 0.00 2.71
5299 5824 6.831868 AGCAGGTAGTAAAGAAAAGGAAAACA 59.168 34.615 0.00 0.00 0.00 2.83
5300 5825 7.273320 AGCAGGTAGTAAAGAAAAGGAAAAC 57.727 36.000 0.00 0.00 0.00 2.43
5301 5826 7.340999 ACAAGCAGGTAGTAAAGAAAAGGAAAA 59.659 33.333 0.00 0.00 0.00 2.29
5302 5827 6.831868 ACAAGCAGGTAGTAAAGAAAAGGAAA 59.168 34.615 0.00 0.00 0.00 3.13
5303 5828 6.362248 ACAAGCAGGTAGTAAAGAAAAGGAA 58.638 36.000 0.00 0.00 0.00 3.36
5304 5829 5.937111 ACAAGCAGGTAGTAAAGAAAAGGA 58.063 37.500 0.00 0.00 0.00 3.36
5305 5830 6.635030 AACAAGCAGGTAGTAAAGAAAAGG 57.365 37.500 0.00 0.00 0.00 3.11
5306 5831 8.406297 AGAAAACAAGCAGGTAGTAAAGAAAAG 58.594 33.333 0.00 0.00 0.00 2.27
5307 5832 8.288689 AGAAAACAAGCAGGTAGTAAAGAAAA 57.711 30.769 0.00 0.00 0.00 2.29
5308 5833 7.875327 AGAAAACAAGCAGGTAGTAAAGAAA 57.125 32.000 0.00 0.00 0.00 2.52
5309 5834 7.875327 AAGAAAACAAGCAGGTAGTAAAGAA 57.125 32.000 0.00 0.00 0.00 2.52
5310 5835 7.875327 AAAGAAAACAAGCAGGTAGTAAAGA 57.125 32.000 0.00 0.00 0.00 2.52
5311 5836 9.827411 GATAAAGAAAACAAGCAGGTAGTAAAG 57.173 33.333 0.00 0.00 0.00 1.85
5312 5837 9.569122 AGATAAAGAAAACAAGCAGGTAGTAAA 57.431 29.630 0.00 0.00 0.00 2.01
5313 5838 9.569122 AAGATAAAGAAAACAAGCAGGTAGTAA 57.431 29.630 0.00 0.00 0.00 2.24
5314 5839 9.569122 AAAGATAAAGAAAACAAGCAGGTAGTA 57.431 29.630 0.00 0.00 0.00 1.82
5315 5840 8.465273 AAAGATAAAGAAAACAAGCAGGTAGT 57.535 30.769 0.00 0.00 0.00 2.73
5317 5842 9.569122 ACTAAAGATAAAGAAAACAAGCAGGTA 57.431 29.630 0.00 0.00 0.00 3.08
5318 5843 8.465273 ACTAAAGATAAAGAAAACAAGCAGGT 57.535 30.769 0.00 0.00 0.00 4.00
5353 5878 4.954092 ATGAGACTTCGCTGGAATTTTC 57.046 40.909 0.00 0.00 0.00 2.29
5354 5879 4.761739 TCAATGAGACTTCGCTGGAATTTT 59.238 37.500 0.00 0.00 0.00 1.82
5355 5880 4.326826 TCAATGAGACTTCGCTGGAATTT 58.673 39.130 0.00 0.00 0.00 1.82
5356 5881 3.937706 CTCAATGAGACTTCGCTGGAATT 59.062 43.478 3.77 0.00 0.00 2.17
5357 5882 3.196469 TCTCAATGAGACTTCGCTGGAAT 59.804 43.478 9.18 0.00 33.35 3.01
5358 5883 2.562738 TCTCAATGAGACTTCGCTGGAA 59.437 45.455 9.18 0.00 33.35 3.53
5359 5884 2.171003 TCTCAATGAGACTTCGCTGGA 58.829 47.619 9.18 0.00 33.35 3.86
5360 5885 2.662006 TCTCAATGAGACTTCGCTGG 57.338 50.000 9.18 0.00 33.35 4.85
5361 5886 4.739228 CACTATCTCAATGAGACTTCGCTG 59.261 45.833 15.96 2.01 41.76 5.18
5362 5887 4.736168 GCACTATCTCAATGAGACTTCGCT 60.736 45.833 15.96 0.89 41.76 4.93
5363 5888 3.489047 GCACTATCTCAATGAGACTTCGC 59.511 47.826 15.96 12.19 41.76 4.70
5364 5889 4.930963 AGCACTATCTCAATGAGACTTCG 58.069 43.478 15.96 6.19 41.76 3.79
5365 5890 5.900425 TGAGCACTATCTCAATGAGACTTC 58.100 41.667 15.96 7.61 41.76 3.01
5366 5891 5.929058 TGAGCACTATCTCAATGAGACTT 57.071 39.130 15.96 3.22 41.76 3.01
5367 5892 5.929058 TTGAGCACTATCTCAATGAGACT 57.071 39.130 15.96 7.56 45.21 3.24
5375 5900 3.489908 GCGAGTCATTGAGCACTATCTCA 60.490 47.826 0.00 0.00 40.99 3.27
5376 5901 3.049206 GCGAGTCATTGAGCACTATCTC 58.951 50.000 0.00 0.00 0.00 2.75
5377 5902 2.428530 TGCGAGTCATTGAGCACTATCT 59.571 45.455 0.00 0.00 34.39 1.98
5378 5903 2.814269 TGCGAGTCATTGAGCACTATC 58.186 47.619 0.00 0.00 34.39 2.08
5379 5904 2.967599 TGCGAGTCATTGAGCACTAT 57.032 45.000 0.00 0.00 34.39 2.12
5380 5905 2.741759 TTGCGAGTCATTGAGCACTA 57.258 45.000 0.00 0.00 39.51 2.74
5381 5906 2.005451 GATTGCGAGTCATTGAGCACT 58.995 47.619 0.00 0.00 39.51 4.40
5382 5907 1.063174 GGATTGCGAGTCATTGAGCAC 59.937 52.381 0.00 0.00 39.51 4.40
5383 5908 1.372582 GGATTGCGAGTCATTGAGCA 58.627 50.000 0.00 0.00 37.89 4.26
5384 5909 0.302890 CGGATTGCGAGTCATTGAGC 59.697 55.000 0.00 0.00 0.00 4.26
5385 5910 0.302890 GCGGATTGCGAGTCATTGAG 59.697 55.000 0.29 0.00 0.00 3.02
5386 5911 2.383170 GCGGATTGCGAGTCATTGA 58.617 52.632 0.29 0.00 0.00 2.57
5387 5912 4.983090 GCGGATTGCGAGTCATTG 57.017 55.556 0.29 0.00 0.00 2.82
5396 5921 3.664107 TGTAGGAATATCTGCGGATTGC 58.336 45.455 14.52 2.52 46.70 3.56
5397 5922 4.150627 CGTTGTAGGAATATCTGCGGATTG 59.849 45.833 14.52 0.00 33.71 2.67
5398 5923 4.202223 ACGTTGTAGGAATATCTGCGGATT 60.202 41.667 14.52 0.00 33.71 3.01
5399 5924 3.321111 ACGTTGTAGGAATATCTGCGGAT 59.679 43.478 13.70 13.70 36.07 4.18
5400 5925 2.691526 ACGTTGTAGGAATATCTGCGGA 59.308 45.455 0.00 0.00 0.00 5.54
5401 5926 3.093717 ACGTTGTAGGAATATCTGCGG 57.906 47.619 0.00 0.00 0.00 5.69
5402 5927 4.328983 ACAAACGTTGTAGGAATATCTGCG 59.671 41.667 0.00 0.00 43.27 5.18
5403 5928 5.796350 ACAAACGTTGTAGGAATATCTGC 57.204 39.130 0.00 0.00 43.27 4.26
5404 5929 8.286800 TCAAAACAAACGTTGTAGGAATATCTG 58.713 33.333 0.00 0.00 44.59 2.90
5405 5930 8.385898 TCAAAACAAACGTTGTAGGAATATCT 57.614 30.769 0.00 0.00 44.59 1.98
5406 5931 9.620660 AATCAAAACAAACGTTGTAGGAATATC 57.379 29.630 0.00 0.00 44.59 1.63
5407 5932 9.620660 GAATCAAAACAAACGTTGTAGGAATAT 57.379 29.630 0.00 0.00 44.59 1.28
5408 5933 8.622157 TGAATCAAAACAAACGTTGTAGGAATA 58.378 29.630 0.00 0.00 44.59 1.75
5409 5934 7.484975 TGAATCAAAACAAACGTTGTAGGAAT 58.515 30.769 0.00 0.00 44.59 3.01
5410 5935 6.853720 TGAATCAAAACAAACGTTGTAGGAA 58.146 32.000 0.00 0.00 44.59 3.36
5411 5936 6.438259 TGAATCAAAACAAACGTTGTAGGA 57.562 33.333 0.00 2.23 44.59 2.94
5412 5937 5.173131 GCTGAATCAAAACAAACGTTGTAGG 59.827 40.000 0.00 0.00 44.59 3.18
5413 5938 5.173131 GGCTGAATCAAAACAAACGTTGTAG 59.827 40.000 0.00 0.00 44.59 2.74
5414 5939 5.038033 GGCTGAATCAAAACAAACGTTGTA 58.962 37.500 0.00 0.00 44.59 2.41
5416 5941 3.061271 CGGCTGAATCAAAACAAACGTTG 60.061 43.478 0.00 0.00 0.00 4.10
5417 5942 3.112580 CGGCTGAATCAAAACAAACGTT 58.887 40.909 0.00 0.00 0.00 3.99
5418 5943 2.542824 CCGGCTGAATCAAAACAAACGT 60.543 45.455 0.00 0.00 0.00 3.99
5419 5944 2.050691 CCGGCTGAATCAAAACAAACG 58.949 47.619 0.00 0.00 0.00 3.60
5420 5945 1.792367 GCCGGCTGAATCAAAACAAAC 59.208 47.619 22.15 0.00 0.00 2.93
5421 5946 1.410517 TGCCGGCTGAATCAAAACAAA 59.589 42.857 29.70 0.00 0.00 2.83
5422 5947 1.000385 CTGCCGGCTGAATCAAAACAA 60.000 47.619 29.70 0.17 0.00 2.83
5423 5948 0.597568 CTGCCGGCTGAATCAAAACA 59.402 50.000 29.70 0.41 0.00 2.83
5424 5949 0.881118 TCTGCCGGCTGAATCAAAAC 59.119 50.000 31.10 0.00 0.00 2.43
5425 5950 3.337834 TCTGCCGGCTGAATCAAAA 57.662 47.368 31.10 8.99 0.00 2.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.