Multiple sequence alignment - TraesCS3D01G368900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G368900 chr3D 100.000 2921 0 0 1 2921 482192075 482189155 0.000000e+00 5395.0
1 TraesCS3D01G368900 chr3D 89.412 935 91 5 1000 1930 480842367 480843297 0.000000e+00 1171.0
2 TraesCS3D01G368900 chr3D 84.966 439 48 11 1 422 588978718 588978281 2.080000e-116 429.0
3 TraesCS3D01G368900 chr3D 74.419 817 166 31 1082 1878 455869729 455870522 7.860000e-81 311.0
4 TraesCS3D01G368900 chr3D 72.195 802 168 41 1089 1864 363597664 363596892 8.260000e-46 195.0
5 TraesCS3D01G368900 chr3A 93.300 2433 109 17 508 2921 625211088 625208691 0.000000e+00 3541.0
6 TraesCS3D01G368900 chr3A 88.387 930 100 5 1000 1925 623610041 623610966 0.000000e+00 1112.0
7 TraesCS3D01G368900 chr3A 83.215 423 54 8 65 471 613529628 613530049 3.560000e-99 372.0
8 TraesCS3D01G368900 chr3A 74.083 818 167 31 1082 1878 598553493 598554286 7.920000e-76 294.0
9 TraesCS3D01G368900 chr3A 71.092 806 173 42 1089 1864 484636970 484636195 3.030000e-30 143.0
10 TraesCS3D01G368900 chr3B 91.953 1628 71 32 581 2192 644173071 644171488 0.000000e+00 2226.0
11 TraesCS3D01G368900 chr3B 87.107 954 96 8 1000 1930 641660625 641661574 0.000000e+00 1055.0
12 TraesCS3D01G368900 chr3B 93.464 612 36 2 2312 2920 644166382 644165772 0.000000e+00 905.0
13 TraesCS3D01G368900 chr3B 91.481 493 38 4 1 491 818310526 818311016 0.000000e+00 675.0
14 TraesCS3D01G368900 chr3B 74.384 812 169 29 1082 1878 602331250 602332037 7.860000e-81 311.0
15 TraesCS3D01G368900 chr3B 74.384 812 169 29 1082 1878 602352332 602353119 7.860000e-81 311.0
16 TraesCS3D01G368900 chr3B 75.067 373 61 21 25 384 573308214 573307861 8.440000e-31 145.0
17 TraesCS3D01G368900 chr3B 93.617 94 6 0 2224 2317 644171486 644171393 1.090000e-29 141.0
18 TraesCS3D01G368900 chr5D 82.550 298 39 12 25 315 491661644 491661935 1.740000e-62 250.0
19 TraesCS3D01G368900 chr5D 81.974 233 29 11 1 223 438042418 438042647 4.970000e-43 185.0
20 TraesCS3D01G368900 chr5D 73.171 451 92 22 25 465 175780763 175780332 5.080000e-28 135.0
21 TraesCS3D01G368900 chr1D 79.082 392 61 15 27 401 449984650 449985037 1.740000e-62 250.0
22 TraesCS3D01G368900 chr5B 79.339 363 51 18 1 344 321410345 321409988 1.750000e-57 233.0
23 TraesCS3D01G368900 chr1A 80.272 294 36 15 11 286 380320989 380320700 4.940000e-48 202.0
24 TraesCS3D01G368900 chr1A 77.811 338 51 14 1 319 423988062 423987730 1.380000e-43 187.0
25 TraesCS3D01G368900 chr1B 78.462 325 52 17 1 312 630677996 630677677 2.300000e-46 196.0
26 TraesCS3D01G368900 chr2D 78.006 341 52 15 1 322 413950879 413950543 2.970000e-45 193.0
27 TraesCS3D01G368900 chr2D 75.524 286 53 13 1301 1579 560399387 560399662 1.100000e-24 124.0
28 TraesCS3D01G368900 chr2D 91.837 49 4 0 501 549 135541973 135542021 5.220000e-08 69.4
29 TraesCS3D01G368900 chr2A 92.308 39 3 0 510 548 682018449 682018411 4.070000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G368900 chr3D 482189155 482192075 2920 True 5395.0 5395 100.000 1 2921 1 chr3D.!!$R2 2920
1 TraesCS3D01G368900 chr3D 480842367 480843297 930 False 1171.0 1171 89.412 1000 1930 1 chr3D.!!$F2 930
2 TraesCS3D01G368900 chr3D 455869729 455870522 793 False 311.0 311 74.419 1082 1878 1 chr3D.!!$F1 796
3 TraesCS3D01G368900 chr3A 625208691 625211088 2397 True 3541.0 3541 93.300 508 2921 1 chr3A.!!$R2 2413
4 TraesCS3D01G368900 chr3A 623610041 623610966 925 False 1112.0 1112 88.387 1000 1925 1 chr3A.!!$F3 925
5 TraesCS3D01G368900 chr3A 598553493 598554286 793 False 294.0 294 74.083 1082 1878 1 chr3A.!!$F1 796
6 TraesCS3D01G368900 chr3B 644171393 644173071 1678 True 1183.5 2226 92.785 581 2317 2 chr3B.!!$R3 1736
7 TraesCS3D01G368900 chr3B 641660625 641661574 949 False 1055.0 1055 87.107 1000 1930 1 chr3B.!!$F3 930
8 TraesCS3D01G368900 chr3B 644165772 644166382 610 True 905.0 905 93.464 2312 2920 1 chr3B.!!$R2 608
9 TraesCS3D01G368900 chr3B 602331250 602332037 787 False 311.0 311 74.384 1082 1878 1 chr3B.!!$F1 796
10 TraesCS3D01G368900 chr3B 602352332 602353119 787 False 311.0 311 74.384 1082 1878 1 chr3B.!!$F2 796

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
330 331 0.030603 GGAGAGATGAACCCTCCCCT 60.031 60.0 0.0 0.0 40.35 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1937 2011 0.032017 ATCCCTGACCCGAGCTTAGT 60.032 55.0 0.0 0.0 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.097915 TCCAACAACTAAGGTTAGAGTCAG 57.902 41.667 3.72 0.42 33.88 3.51
24 25 5.011738 TCCAACAACTAAGGTTAGAGTCAGG 59.988 44.000 3.72 7.56 33.88 3.86
25 26 5.238583 CAACAACTAAGGTTAGAGTCAGGG 58.761 45.833 3.72 0.00 33.88 4.45
26 27 4.490706 ACAACTAAGGTTAGAGTCAGGGT 58.509 43.478 3.72 0.00 33.88 4.34
27 28 4.906060 ACAACTAAGGTTAGAGTCAGGGTT 59.094 41.667 3.72 0.00 33.88 4.11
28 29 5.368816 ACAACTAAGGTTAGAGTCAGGGTTT 59.631 40.000 3.72 0.00 33.88 3.27
29 30 6.126565 ACAACTAAGGTTAGAGTCAGGGTTTT 60.127 38.462 3.72 0.00 33.88 2.43
30 31 6.111669 ACTAAGGTTAGAGTCAGGGTTTTC 57.888 41.667 3.72 0.00 34.84 2.29
31 32 5.605488 ACTAAGGTTAGAGTCAGGGTTTTCA 59.395 40.000 3.72 0.00 34.84 2.69
32 33 4.353383 AGGTTAGAGTCAGGGTTTTCAC 57.647 45.455 0.00 0.00 0.00 3.18
33 34 3.072622 AGGTTAGAGTCAGGGTTTTCACC 59.927 47.826 0.00 0.00 43.37 4.02
34 35 9.841524 CTAAGGTTAGAGTCAGGGTTTTCACCC 62.842 48.148 1.77 1.77 47.00 4.61
59 60 7.666063 TGAAGAATCAGTCTGAGATAATCCA 57.334 36.000 8.82 0.00 36.40 3.41
60 61 8.082672 TGAAGAATCAGTCTGAGATAATCCAA 57.917 34.615 8.82 0.00 36.40 3.53
61 62 8.202811 TGAAGAATCAGTCTGAGATAATCCAAG 58.797 37.037 8.82 0.00 36.40 3.61
62 63 6.523840 AGAATCAGTCTGAGATAATCCAAGC 58.476 40.000 8.82 0.00 34.29 4.01
63 64 5.883685 ATCAGTCTGAGATAATCCAAGCA 57.116 39.130 8.82 0.00 0.00 3.91
64 65 5.682234 TCAGTCTGAGATAATCCAAGCAA 57.318 39.130 0.00 0.00 0.00 3.91
65 66 6.244552 TCAGTCTGAGATAATCCAAGCAAT 57.755 37.500 0.00 0.00 0.00 3.56
66 67 6.053650 TCAGTCTGAGATAATCCAAGCAATG 58.946 40.000 0.00 0.00 0.00 2.82
67 68 4.820716 AGTCTGAGATAATCCAAGCAATGC 59.179 41.667 0.00 0.00 0.00 3.56
68 69 4.023365 GTCTGAGATAATCCAAGCAATGCC 60.023 45.833 0.00 0.00 0.00 4.40
69 70 4.141321 TCTGAGATAATCCAAGCAATGCCT 60.141 41.667 0.00 0.00 0.00 4.75
70 71 4.539726 TGAGATAATCCAAGCAATGCCTT 58.460 39.130 0.00 0.00 0.00 4.35
71 72 4.581824 TGAGATAATCCAAGCAATGCCTTC 59.418 41.667 0.00 0.00 0.00 3.46
72 73 4.539726 AGATAATCCAAGCAATGCCTTCA 58.460 39.130 0.00 0.00 0.00 3.02
73 74 4.957954 AGATAATCCAAGCAATGCCTTCAA 59.042 37.500 0.00 0.00 0.00 2.69
74 75 5.601313 AGATAATCCAAGCAATGCCTTCAAT 59.399 36.000 0.00 0.00 0.00 2.57
75 76 6.779049 AGATAATCCAAGCAATGCCTTCAATA 59.221 34.615 0.00 0.00 0.00 1.90
76 77 5.680594 AATCCAAGCAATGCCTTCAATAA 57.319 34.783 0.00 0.00 0.00 1.40
77 78 4.724074 TCCAAGCAATGCCTTCAATAAG 57.276 40.909 0.00 0.00 0.00 1.73
89 90 5.365403 CCTTCAATAAGGTAACAACGCAA 57.635 39.130 0.00 0.00 46.34 4.85
90 91 5.764131 CCTTCAATAAGGTAACAACGCAAA 58.236 37.500 0.00 0.00 46.34 3.68
91 92 6.210078 CCTTCAATAAGGTAACAACGCAAAA 58.790 36.000 0.00 0.00 46.34 2.44
92 93 6.143278 CCTTCAATAAGGTAACAACGCAAAAC 59.857 38.462 0.00 0.00 46.34 2.43
93 94 6.132791 TCAATAAGGTAACAACGCAAAACA 57.867 33.333 0.00 0.00 41.41 2.83
94 95 6.561614 TCAATAAGGTAACAACGCAAAACAA 58.438 32.000 0.00 0.00 41.41 2.83
95 96 6.472808 TCAATAAGGTAACAACGCAAAACAAC 59.527 34.615 0.00 0.00 41.41 3.32
96 97 2.788030 AGGTAACAACGCAAAACAACG 58.212 42.857 0.00 0.00 41.41 4.10
97 98 2.162008 AGGTAACAACGCAAAACAACGT 59.838 40.909 0.00 0.00 46.07 3.99
98 99 2.527087 GGTAACAACGCAAAACAACGTC 59.473 45.455 0.00 0.00 42.68 4.34
99 100 1.252235 AACAACGCAAAACAACGTCG 58.748 45.000 0.00 0.00 42.68 5.12
100 101 1.129301 ACAACGCAAAACAACGTCGC 61.129 50.000 0.00 0.00 42.68 5.19
101 102 1.584225 AACGCAAAACAACGTCGCC 60.584 52.632 0.00 0.00 42.68 5.54
102 103 2.023461 CGCAAAACAACGTCGCCA 59.977 55.556 0.00 0.00 0.00 5.69
103 104 1.369930 CGCAAAACAACGTCGCCAT 60.370 52.632 0.00 0.00 0.00 4.40
104 105 0.932585 CGCAAAACAACGTCGCCATT 60.933 50.000 0.00 0.00 0.00 3.16
105 106 0.502275 GCAAAACAACGTCGCCATTG 59.498 50.000 0.00 0.00 0.00 2.82
106 107 0.502275 CAAAACAACGTCGCCATTGC 59.498 50.000 0.00 0.00 0.00 3.56
107 108 0.101399 AAAACAACGTCGCCATTGCA 59.899 45.000 0.00 0.00 37.32 4.08
108 109 0.317770 AAACAACGTCGCCATTGCAG 60.318 50.000 0.00 0.00 37.32 4.41
109 110 2.128853 AACAACGTCGCCATTGCAGG 62.129 55.000 0.00 0.00 37.32 4.85
110 111 2.281484 AACGTCGCCATTGCAGGT 60.281 55.556 0.00 0.00 37.32 4.00
111 112 1.004320 AACGTCGCCATTGCAGGTA 60.004 52.632 0.00 0.00 37.32 3.08
112 113 0.392461 AACGTCGCCATTGCAGGTAT 60.392 50.000 0.00 0.00 37.32 2.73
113 114 0.462375 ACGTCGCCATTGCAGGTATA 59.538 50.000 0.00 0.00 37.32 1.47
114 115 1.134640 ACGTCGCCATTGCAGGTATAA 60.135 47.619 0.00 0.00 37.32 0.98
115 116 1.260561 CGTCGCCATTGCAGGTATAAC 59.739 52.381 0.00 0.00 37.32 1.89
116 117 1.602377 GTCGCCATTGCAGGTATAACC 59.398 52.381 0.00 0.00 38.99 2.85
117 118 1.210722 TCGCCATTGCAGGTATAACCA 59.789 47.619 0.00 0.00 41.95 3.67
118 119 2.020720 CGCCATTGCAGGTATAACCAA 58.979 47.619 0.00 0.00 41.95 3.67
119 120 2.223479 CGCCATTGCAGGTATAACCAAC 60.223 50.000 0.00 0.00 41.95 3.77
120 121 3.023832 GCCATTGCAGGTATAACCAACT 58.976 45.455 0.00 0.00 41.95 3.16
121 122 3.066760 GCCATTGCAGGTATAACCAACTC 59.933 47.826 0.00 0.00 41.95 3.01
122 123 3.312421 CCATTGCAGGTATAACCAACTCG 59.688 47.826 0.00 0.00 41.95 4.18
123 124 2.684001 TGCAGGTATAACCAACTCGG 57.316 50.000 0.00 0.00 41.95 4.63
124 125 1.208535 TGCAGGTATAACCAACTCGGG 59.791 52.381 0.00 0.00 41.95 5.14
125 126 1.949465 CAGGTATAACCAACTCGGGC 58.051 55.000 0.00 0.00 41.95 6.13
126 127 1.208535 CAGGTATAACCAACTCGGGCA 59.791 52.381 0.00 0.00 41.95 5.36
127 128 1.485066 AGGTATAACCAACTCGGGCAG 59.515 52.381 0.00 0.00 41.95 4.85
128 129 1.483415 GGTATAACCAACTCGGGCAGA 59.517 52.381 0.00 0.00 38.42 4.26
129 130 2.547826 GTATAACCAACTCGGGCAGAC 58.452 52.381 0.00 0.00 40.22 3.51
130 131 0.252197 ATAACCAACTCGGGCAGACC 59.748 55.000 0.00 0.00 40.22 3.85
131 132 0.834687 TAACCAACTCGGGCAGACCT 60.835 55.000 0.00 0.00 40.22 3.85
132 133 0.834687 AACCAACTCGGGCAGACCTA 60.835 55.000 0.00 0.00 40.22 3.08
133 134 1.258445 ACCAACTCGGGCAGACCTAG 61.258 60.000 0.00 0.00 40.22 3.02
134 135 1.517832 CAACTCGGGCAGACCTAGG 59.482 63.158 7.41 7.41 36.38 3.02
135 136 0.970937 CAACTCGGGCAGACCTAGGA 60.971 60.000 17.98 0.00 36.38 2.94
136 137 0.032017 AACTCGGGCAGACCTAGGAT 60.032 55.000 17.98 0.00 36.38 3.24
137 138 0.032017 ACTCGGGCAGACCTAGGATT 60.032 55.000 17.98 0.00 36.38 3.01
138 139 1.123928 CTCGGGCAGACCTAGGATTT 58.876 55.000 17.98 0.00 36.97 2.17
139 140 1.069358 CTCGGGCAGACCTAGGATTTC 59.931 57.143 17.98 2.21 36.97 2.17
140 141 0.830648 CGGGCAGACCTAGGATTTCA 59.169 55.000 17.98 0.00 36.97 2.69
141 142 1.473434 CGGGCAGACCTAGGATTTCAC 60.473 57.143 17.98 1.85 36.97 3.18
142 143 1.134068 GGGCAGACCTAGGATTTCACC 60.134 57.143 17.98 8.43 35.85 4.02
143 144 1.134068 GGCAGACCTAGGATTTCACCC 60.134 57.143 17.98 3.60 0.00 4.61
144 145 1.840635 GCAGACCTAGGATTTCACCCT 59.159 52.381 17.98 0.00 37.80 4.34
145 146 2.420687 GCAGACCTAGGATTTCACCCTG 60.421 54.545 17.98 9.64 35.30 4.45
146 147 3.107601 CAGACCTAGGATTTCACCCTGA 58.892 50.000 17.98 0.00 35.30 3.86
147 148 3.519510 CAGACCTAGGATTTCACCCTGAA 59.480 47.826 17.98 0.00 35.30 3.02
148 149 4.164988 CAGACCTAGGATTTCACCCTGAAT 59.835 45.833 17.98 0.00 36.11 2.57
149 150 4.410555 AGACCTAGGATTTCACCCTGAATC 59.589 45.833 17.98 0.00 36.11 2.52
150 151 4.375313 ACCTAGGATTTCACCCTGAATCT 58.625 43.478 17.98 0.00 36.11 2.40
151 152 4.410555 ACCTAGGATTTCACCCTGAATCTC 59.589 45.833 17.98 0.00 36.11 2.75
152 153 3.550437 AGGATTTCACCCTGAATCTCG 57.450 47.619 0.00 0.00 36.11 4.04
153 154 3.107601 AGGATTTCACCCTGAATCTCGA 58.892 45.455 0.00 0.00 36.11 4.04
154 155 3.133721 AGGATTTCACCCTGAATCTCGAG 59.866 47.826 5.93 5.93 36.11 4.04
155 156 3.133003 GGATTTCACCCTGAATCTCGAGA 59.867 47.826 19.19 19.19 36.11 4.04
156 157 3.594603 TTTCACCCTGAATCTCGAGAC 57.405 47.619 19.30 6.69 36.11 3.36
157 158 2.516227 TCACCCTGAATCTCGAGACT 57.484 50.000 19.30 6.71 0.00 3.24
158 159 2.095461 TCACCCTGAATCTCGAGACTG 58.905 52.381 19.30 9.93 0.00 3.51
159 160 1.135915 CACCCTGAATCTCGAGACTGG 59.864 57.143 19.30 17.99 0.00 4.00
160 161 0.749649 CCCTGAATCTCGAGACTGGG 59.250 60.000 24.43 24.43 35.77 4.45
161 162 1.479709 CCTGAATCTCGAGACTGGGT 58.520 55.000 19.30 0.00 0.00 4.51
162 163 1.135915 CCTGAATCTCGAGACTGGGTG 59.864 57.143 19.30 6.17 0.00 4.61
163 164 0.532573 TGAATCTCGAGACTGGGTGC 59.467 55.000 19.30 0.00 0.00 5.01
164 165 0.179097 GAATCTCGAGACTGGGTGCC 60.179 60.000 19.30 0.00 0.00 5.01
165 166 1.617947 AATCTCGAGACTGGGTGCCC 61.618 60.000 19.30 0.00 0.00 5.36
166 167 4.135153 CTCGAGACTGGGTGCCCG 62.135 72.222 6.58 0.54 39.42 6.13
167 168 4.988716 TCGAGACTGGGTGCCCGT 62.989 66.667 2.44 3.80 39.42 5.28
168 169 3.066190 CGAGACTGGGTGCCCGTA 61.066 66.667 2.44 0.00 39.42 4.02
169 170 2.893398 GAGACTGGGTGCCCGTAG 59.107 66.667 2.44 0.00 39.42 3.51
184 185 2.279582 CGTAGGACACCATCACAGTC 57.720 55.000 0.00 0.00 0.00 3.51
185 186 1.544246 CGTAGGACACCATCACAGTCA 59.456 52.381 0.00 0.00 34.04 3.41
186 187 2.671351 CGTAGGACACCATCACAGTCAC 60.671 54.545 0.00 0.00 34.04 3.67
187 188 1.722034 AGGACACCATCACAGTCACT 58.278 50.000 0.00 0.00 34.04 3.41
188 189 1.620819 AGGACACCATCACAGTCACTC 59.379 52.381 0.00 0.00 34.04 3.51
189 190 1.670087 GGACACCATCACAGTCACTCG 60.670 57.143 0.00 0.00 34.04 4.18
190 191 1.000163 GACACCATCACAGTCACTCGT 60.000 52.381 0.00 0.00 32.68 4.18
191 192 1.269778 ACACCATCACAGTCACTCGTG 60.270 52.381 2.02 2.02 34.34 4.35
192 193 1.040646 ACCATCACAGTCACTCGTGT 58.959 50.000 7.11 0.00 34.66 4.49
193 194 2.030274 CACCATCACAGTCACTCGTGTA 60.030 50.000 7.11 0.00 34.66 2.90
194 195 2.229062 ACCATCACAGTCACTCGTGTAG 59.771 50.000 7.11 2.82 34.66 2.74
195 196 2.229062 CCATCACAGTCACTCGTGTAGT 59.771 50.000 7.11 0.00 39.81 2.73
196 197 3.493272 CATCACAGTCACTCGTGTAGTC 58.507 50.000 7.11 0.00 35.76 2.59
197 198 1.529865 TCACAGTCACTCGTGTAGTCG 59.470 52.381 7.11 0.00 35.76 4.18
198 199 0.237761 ACAGTCACTCGTGTAGTCGC 59.762 55.000 0.00 0.00 35.76 5.19
199 200 0.454620 CAGTCACTCGTGTAGTCGCC 60.455 60.000 0.00 0.00 35.76 5.54
200 201 0.887836 AGTCACTCGTGTAGTCGCCA 60.888 55.000 0.00 0.00 35.76 5.69
201 202 0.728466 GTCACTCGTGTAGTCGCCAC 60.728 60.000 0.00 0.00 35.76 5.01
202 203 1.443872 CACTCGTGTAGTCGCCACC 60.444 63.158 0.00 0.00 35.76 4.61
203 204 1.900016 ACTCGTGTAGTCGCCACCA 60.900 57.895 0.00 0.00 30.33 4.17
204 205 1.443872 CTCGTGTAGTCGCCACCAC 60.444 63.158 0.00 0.00 0.00 4.16
205 206 1.863662 CTCGTGTAGTCGCCACCACT 61.864 60.000 0.00 0.00 0.00 4.00
206 207 1.006571 CGTGTAGTCGCCACCACTT 60.007 57.895 0.00 0.00 0.00 3.16
207 208 0.599204 CGTGTAGTCGCCACCACTTT 60.599 55.000 0.00 0.00 0.00 2.66
208 209 1.589803 GTGTAGTCGCCACCACTTTT 58.410 50.000 0.00 0.00 0.00 2.27
209 210 1.944709 GTGTAGTCGCCACCACTTTTT 59.055 47.619 0.00 0.00 0.00 1.94
210 211 2.032290 GTGTAGTCGCCACCACTTTTTC 60.032 50.000 0.00 0.00 0.00 2.29
211 212 1.193874 GTAGTCGCCACCACTTTTTCG 59.806 52.381 0.00 0.00 0.00 3.46
212 213 1.370051 GTCGCCACCACTTTTTCGC 60.370 57.895 0.00 0.00 0.00 4.70
213 214 2.426752 CGCCACCACTTTTTCGCG 60.427 61.111 0.00 0.00 0.00 5.87
214 215 2.887889 CGCCACCACTTTTTCGCGA 61.888 57.895 3.71 3.71 42.03 5.87
215 216 1.579429 GCCACCACTTTTTCGCGAT 59.421 52.632 10.88 0.00 0.00 4.58
216 217 0.454452 GCCACCACTTTTTCGCGATC 60.454 55.000 10.88 0.00 0.00 3.69
217 218 1.156736 CCACCACTTTTTCGCGATCT 58.843 50.000 10.88 0.00 0.00 2.75
218 219 1.128692 CCACCACTTTTTCGCGATCTC 59.871 52.381 10.88 0.00 0.00 2.75
219 220 1.798223 CACCACTTTTTCGCGATCTCA 59.202 47.619 10.88 0.00 0.00 3.27
220 221 2.069273 ACCACTTTTTCGCGATCTCAG 58.931 47.619 10.88 6.60 0.00 3.35
221 222 1.201965 CCACTTTTTCGCGATCTCAGC 60.202 52.381 10.88 0.00 0.00 4.26
222 223 1.460743 CACTTTTTCGCGATCTCAGCA 59.539 47.619 10.88 0.00 34.19 4.41
223 224 2.096268 CACTTTTTCGCGATCTCAGCAA 60.096 45.455 10.88 0.00 34.19 3.91
224 225 2.096218 ACTTTTTCGCGATCTCAGCAAC 60.096 45.455 10.88 0.00 34.19 4.17
225 226 1.795768 TTTTCGCGATCTCAGCAACT 58.204 45.000 10.88 0.00 34.19 3.16
226 227 2.647529 TTTCGCGATCTCAGCAACTA 57.352 45.000 10.88 0.00 34.19 2.24
227 228 1.909376 TTCGCGATCTCAGCAACTAC 58.091 50.000 10.88 0.00 34.19 2.73
228 229 1.095600 TCGCGATCTCAGCAACTACT 58.904 50.000 3.71 0.00 34.19 2.57
229 230 1.064208 TCGCGATCTCAGCAACTACTC 59.936 52.381 3.71 0.00 34.19 2.59
230 231 1.471964 GCGATCTCAGCAACTACTCG 58.528 55.000 0.00 0.00 34.19 4.18
231 232 1.202200 GCGATCTCAGCAACTACTCGT 60.202 52.381 0.00 0.00 34.19 4.18
232 233 2.710760 CGATCTCAGCAACTACTCGTC 58.289 52.381 0.00 0.00 0.00 4.20
233 234 2.710760 GATCTCAGCAACTACTCGTCG 58.289 52.381 0.00 0.00 0.00 5.12
234 235 0.168348 TCTCAGCAACTACTCGTCGC 59.832 55.000 0.00 0.00 0.00 5.19
235 236 0.798771 CTCAGCAACTACTCGTCGCC 60.799 60.000 0.00 0.00 0.00 5.54
236 237 2.152699 CAGCAACTACTCGTCGCCG 61.153 63.158 0.00 0.00 0.00 6.46
237 238 3.542742 GCAACTACTCGTCGCCGC 61.543 66.667 0.00 0.00 0.00 6.53
238 239 2.178521 CAACTACTCGTCGCCGCT 59.821 61.111 0.00 0.00 0.00 5.52
239 240 2.152699 CAACTACTCGTCGCCGCTG 61.153 63.158 0.00 0.00 0.00 5.18
240 241 3.966026 AACTACTCGTCGCCGCTGC 62.966 63.158 0.00 0.00 0.00 5.25
241 242 4.476410 CTACTCGTCGCCGCTGCA 62.476 66.667 0.00 0.00 37.32 4.41
242 243 4.771356 TACTCGTCGCCGCTGCAC 62.771 66.667 0.00 0.00 37.32 4.57
249 250 4.465512 CGCCGCTGCACAACCATC 62.466 66.667 0.00 0.00 37.32 3.51
250 251 4.120331 GCCGCTGCACAACCATCC 62.120 66.667 0.00 0.00 37.47 3.51
251 252 3.443045 CCGCTGCACAACCATCCC 61.443 66.667 0.00 0.00 0.00 3.85
252 253 2.360350 CGCTGCACAACCATCCCT 60.360 61.111 0.00 0.00 0.00 4.20
253 254 2.401766 CGCTGCACAACCATCCCTC 61.402 63.158 0.00 0.00 0.00 4.30
254 255 1.001641 GCTGCACAACCATCCCTCT 60.002 57.895 0.00 0.00 0.00 3.69
255 256 1.310933 GCTGCACAACCATCCCTCTG 61.311 60.000 0.00 0.00 0.00 3.35
256 257 1.303561 TGCACAACCATCCCTCTGC 60.304 57.895 0.00 0.00 0.00 4.26
257 258 2.401766 GCACAACCATCCCTCTGCG 61.402 63.158 0.00 0.00 0.00 5.18
258 259 1.003355 CACAACCATCCCTCTGCGT 60.003 57.895 0.00 0.00 0.00 5.24
259 260 1.021390 CACAACCATCCCTCTGCGTC 61.021 60.000 0.00 0.00 0.00 5.19
260 261 1.296392 CAACCATCCCTCTGCGTCA 59.704 57.895 0.00 0.00 0.00 4.35
261 262 0.321564 CAACCATCCCTCTGCGTCAA 60.322 55.000 0.00 0.00 0.00 3.18
262 263 0.036010 AACCATCCCTCTGCGTCAAG 60.036 55.000 0.00 0.00 0.00 3.02
263 264 1.194781 ACCATCCCTCTGCGTCAAGT 61.195 55.000 0.00 0.00 0.00 3.16
264 265 0.460987 CCATCCCTCTGCGTCAAGTC 60.461 60.000 0.00 0.00 0.00 3.01
265 266 0.534412 CATCCCTCTGCGTCAAGTCT 59.466 55.000 0.00 0.00 0.00 3.24
266 267 1.066573 CATCCCTCTGCGTCAAGTCTT 60.067 52.381 0.00 0.00 0.00 3.01
267 268 1.048601 TCCCTCTGCGTCAAGTCTTT 58.951 50.000 0.00 0.00 0.00 2.52
268 269 1.151668 CCCTCTGCGTCAAGTCTTTG 58.848 55.000 0.00 0.00 35.57 2.77
269 270 1.541233 CCCTCTGCGTCAAGTCTTTGT 60.541 52.381 0.00 0.00 35.73 2.83
270 271 1.795286 CCTCTGCGTCAAGTCTTTGTC 59.205 52.381 0.00 0.00 35.73 3.18
271 272 1.795286 CTCTGCGTCAAGTCTTTGTCC 59.205 52.381 0.00 0.00 35.73 4.02
272 273 1.138069 TCTGCGTCAAGTCTTTGTCCA 59.862 47.619 0.00 0.00 35.73 4.02
273 274 2.146342 CTGCGTCAAGTCTTTGTCCAT 58.854 47.619 0.00 0.00 35.73 3.41
274 275 3.006430 TCTGCGTCAAGTCTTTGTCCATA 59.994 43.478 0.00 0.00 35.73 2.74
275 276 3.325870 TGCGTCAAGTCTTTGTCCATAG 58.674 45.455 0.00 0.00 35.73 2.23
276 277 3.244078 TGCGTCAAGTCTTTGTCCATAGT 60.244 43.478 0.00 0.00 35.73 2.12
277 278 3.746492 GCGTCAAGTCTTTGTCCATAGTT 59.254 43.478 0.00 0.00 35.73 2.24
278 279 4.213482 GCGTCAAGTCTTTGTCCATAGTTT 59.787 41.667 0.00 0.00 35.73 2.66
279 280 5.679906 CGTCAAGTCTTTGTCCATAGTTTG 58.320 41.667 0.00 0.00 35.73 2.93
280 281 5.452777 GTCAAGTCTTTGTCCATAGTTTGC 58.547 41.667 0.00 0.00 35.73 3.68
281 282 5.008613 GTCAAGTCTTTGTCCATAGTTTGCA 59.991 40.000 0.00 0.00 35.73 4.08
282 283 5.769662 TCAAGTCTTTGTCCATAGTTTGCAT 59.230 36.000 0.00 0.00 35.73 3.96
283 284 5.886960 AGTCTTTGTCCATAGTTTGCATC 57.113 39.130 0.00 0.00 0.00 3.91
284 285 5.564550 AGTCTTTGTCCATAGTTTGCATCT 58.435 37.500 0.00 0.00 0.00 2.90
285 286 5.645497 AGTCTTTGTCCATAGTTTGCATCTC 59.355 40.000 0.00 0.00 0.00 2.75
286 287 5.412594 GTCTTTGTCCATAGTTTGCATCTCA 59.587 40.000 0.00 0.00 0.00 3.27
287 288 5.412594 TCTTTGTCCATAGTTTGCATCTCAC 59.587 40.000 0.00 0.00 0.00 3.51
288 289 3.609853 TGTCCATAGTTTGCATCTCACC 58.390 45.455 0.00 0.00 0.00 4.02
289 290 2.609459 GTCCATAGTTTGCATCTCACCG 59.391 50.000 0.00 0.00 0.00 4.94
290 291 1.331756 CCATAGTTTGCATCTCACCGC 59.668 52.381 0.00 0.00 0.00 5.68
291 292 1.331756 CATAGTTTGCATCTCACCGCC 59.668 52.381 0.00 0.00 0.00 6.13
292 293 0.739462 TAGTTTGCATCTCACCGCCG 60.739 55.000 0.00 0.00 0.00 6.46
293 294 2.032634 GTTTGCATCTCACCGCCGA 61.033 57.895 0.00 0.00 0.00 5.54
294 295 1.302112 TTTGCATCTCACCGCCGAA 60.302 52.632 0.00 0.00 0.00 4.30
295 296 1.298157 TTTGCATCTCACCGCCGAAG 61.298 55.000 0.00 0.00 0.00 3.79
296 297 2.125512 GCATCTCACCGCCGAAGT 60.126 61.111 0.00 0.00 0.00 3.01
297 298 2.167861 GCATCTCACCGCCGAAGTC 61.168 63.158 0.00 0.00 0.00 3.01
298 299 1.519455 CATCTCACCGCCGAAGTCC 60.519 63.158 0.00 0.00 0.00 3.85
299 300 1.982395 ATCTCACCGCCGAAGTCCA 60.982 57.895 0.00 0.00 0.00 4.02
300 301 1.330655 ATCTCACCGCCGAAGTCCAT 61.331 55.000 0.00 0.00 0.00 3.41
301 302 1.519455 CTCACCGCCGAAGTCCATC 60.519 63.158 0.00 0.00 0.00 3.51
302 303 2.225791 CTCACCGCCGAAGTCCATCA 62.226 60.000 0.00 0.00 0.00 3.07
303 304 1.153369 CACCGCCGAAGTCCATCAT 60.153 57.895 0.00 0.00 0.00 2.45
304 305 1.144057 ACCGCCGAAGTCCATCATC 59.856 57.895 0.00 0.00 0.00 2.92
305 306 1.143838 CCGCCGAAGTCCATCATCA 59.856 57.895 0.00 0.00 0.00 3.07
306 307 0.877649 CCGCCGAAGTCCATCATCAG 60.878 60.000 0.00 0.00 0.00 2.90
307 308 0.103026 CGCCGAAGTCCATCATCAGA 59.897 55.000 0.00 0.00 0.00 3.27
308 309 1.269988 CGCCGAAGTCCATCATCAGAT 60.270 52.381 0.00 0.00 33.87 2.90
309 310 2.411904 GCCGAAGTCCATCATCAGATC 58.588 52.381 0.00 0.00 30.20 2.75
310 311 2.036992 GCCGAAGTCCATCATCAGATCT 59.963 50.000 0.00 0.00 30.20 2.75
311 312 3.651206 CCGAAGTCCATCATCAGATCTG 58.349 50.000 17.07 17.07 30.20 2.90
312 313 3.554544 CCGAAGTCCATCATCAGATCTGG 60.555 52.174 22.42 7.73 30.20 3.86
313 314 3.320256 CGAAGTCCATCATCAGATCTGGA 59.680 47.826 22.42 13.01 31.96 3.86
314 315 4.559099 CGAAGTCCATCATCAGATCTGGAG 60.559 50.000 22.42 14.74 34.44 3.86
315 316 4.196118 AGTCCATCATCAGATCTGGAGA 57.804 45.455 22.42 19.17 34.44 3.71
316 317 4.154176 AGTCCATCATCAGATCTGGAGAG 58.846 47.826 22.42 10.02 34.44 3.20
317 318 4.140971 AGTCCATCATCAGATCTGGAGAGA 60.141 45.833 22.42 14.58 34.44 3.10
318 319 4.773674 GTCCATCATCAGATCTGGAGAGAT 59.226 45.833 22.42 15.99 42.02 2.75
319 320 4.773149 TCCATCATCAGATCTGGAGAGATG 59.227 45.833 22.42 23.86 39.19 2.90
320 321 4.773149 CCATCATCAGATCTGGAGAGATGA 59.227 45.833 28.79 25.12 46.16 2.92
321 322 5.246429 CCATCATCAGATCTGGAGAGATGAA 59.754 44.000 28.79 15.77 45.51 2.57
322 323 5.787953 TCATCAGATCTGGAGAGATGAAC 57.212 43.478 22.42 0.00 41.30 3.18
323 324 4.588106 TCATCAGATCTGGAGAGATGAACC 59.412 45.833 22.42 0.00 41.30 3.62
324 325 3.303938 TCAGATCTGGAGAGATGAACCC 58.696 50.000 22.42 0.00 39.19 4.11
325 326 3.052262 TCAGATCTGGAGAGATGAACCCT 60.052 47.826 22.42 0.00 39.19 4.34
326 327 3.321682 CAGATCTGGAGAGATGAACCCTC 59.678 52.174 15.38 0.00 39.19 4.30
327 328 2.166907 TCTGGAGAGATGAACCCTCC 57.833 55.000 0.00 0.00 45.07 4.30
328 329 1.127343 CTGGAGAGATGAACCCTCCC 58.873 60.000 0.00 0.00 44.41 4.30
329 330 0.326618 TGGAGAGATGAACCCTCCCC 60.327 60.000 0.00 0.00 44.41 4.81
330 331 0.030603 GGAGAGATGAACCCTCCCCT 60.031 60.000 0.00 0.00 40.35 4.79
331 332 1.127343 GAGAGATGAACCCTCCCCTG 58.873 60.000 0.00 0.00 0.00 4.45
332 333 0.719015 AGAGATGAACCCTCCCCTGA 59.281 55.000 0.00 0.00 0.00 3.86
333 334 1.081174 AGAGATGAACCCTCCCCTGAA 59.919 52.381 0.00 0.00 0.00 3.02
334 335 2.131023 GAGATGAACCCTCCCCTGAAT 58.869 52.381 0.00 0.00 0.00 2.57
335 336 2.105649 GAGATGAACCCTCCCCTGAATC 59.894 54.545 0.00 0.00 0.00 2.52
336 337 2.131023 GATGAACCCTCCCCTGAATCT 58.869 52.381 0.00 0.00 0.00 2.40
337 338 2.059756 TGAACCCTCCCCTGAATCTT 57.940 50.000 0.00 0.00 0.00 2.40
338 339 2.358258 TGAACCCTCCCCTGAATCTTT 58.642 47.619 0.00 0.00 0.00 2.52
339 340 2.308866 TGAACCCTCCCCTGAATCTTTC 59.691 50.000 0.00 0.00 0.00 2.62
340 341 2.059756 ACCCTCCCCTGAATCTTTCA 57.940 50.000 0.00 0.00 38.17 2.69
353 354 6.997239 TGAATCTTTCAGTGATCATCCTTG 57.003 37.500 0.00 0.00 34.08 3.61
354 355 6.479006 TGAATCTTTCAGTGATCATCCTTGT 58.521 36.000 0.00 0.00 34.08 3.16
355 356 6.596888 TGAATCTTTCAGTGATCATCCTTGTC 59.403 38.462 0.00 0.00 34.08 3.18
356 357 4.498241 TCTTTCAGTGATCATCCTTGTCG 58.502 43.478 0.00 0.00 0.00 4.35
357 358 3.961480 TTCAGTGATCATCCTTGTCGT 57.039 42.857 0.00 0.00 0.00 4.34
358 359 3.236632 TCAGTGATCATCCTTGTCGTG 57.763 47.619 0.00 0.00 0.00 4.35
359 360 2.094026 TCAGTGATCATCCTTGTCGTGG 60.094 50.000 0.00 0.00 0.00 4.94
360 361 2.094026 CAGTGATCATCCTTGTCGTGGA 60.094 50.000 0.00 0.00 38.06 4.02
361 362 2.167281 AGTGATCATCCTTGTCGTGGAG 59.833 50.000 0.00 0.00 36.99 3.86
362 363 1.134699 TGATCATCCTTGTCGTGGAGC 60.135 52.381 0.00 0.00 36.99 4.70
363 364 0.179000 ATCATCCTTGTCGTGGAGCC 59.821 55.000 0.00 0.00 36.99 4.70
364 365 1.191489 TCATCCTTGTCGTGGAGCCA 61.191 55.000 0.00 0.00 36.99 4.75
365 366 1.021390 CATCCTTGTCGTGGAGCCAC 61.021 60.000 9.61 9.61 43.01 5.01
366 367 1.480212 ATCCTTGTCGTGGAGCCACA 61.480 55.000 18.85 4.38 46.47 4.17
367 368 1.669115 CCTTGTCGTGGAGCCACAG 60.669 63.158 18.85 11.65 46.47 3.66
368 369 1.669115 CTTGTCGTGGAGCCACAGG 60.669 63.158 18.85 4.54 46.47 4.00
369 370 2.099652 CTTGTCGTGGAGCCACAGGA 62.100 60.000 18.85 6.79 46.47 3.86
370 371 2.099652 TTGTCGTGGAGCCACAGGAG 62.100 60.000 18.85 3.52 46.47 3.69
371 372 2.117423 TCGTGGAGCCACAGGAGA 59.883 61.111 18.85 5.77 46.47 3.71
372 373 1.305297 TCGTGGAGCCACAGGAGAT 60.305 57.895 18.85 0.00 46.47 2.75
373 374 1.142748 CGTGGAGCCACAGGAGATC 59.857 63.158 18.85 0.00 46.47 2.75
374 375 1.142748 GTGGAGCCACAGGAGATCG 59.857 63.158 14.53 0.00 45.53 3.69
375 376 2.107953 GGAGCCACAGGAGATCGC 59.892 66.667 0.00 0.00 0.00 4.58
376 377 2.430610 GGAGCCACAGGAGATCGCT 61.431 63.158 0.00 0.00 0.00 4.93
377 378 1.227205 GAGCCACAGGAGATCGCTG 60.227 63.158 0.00 0.00 0.00 5.18
378 379 2.894387 GCCACAGGAGATCGCTGC 60.894 66.667 0.00 0.00 0.00 5.25
379 380 2.580815 CCACAGGAGATCGCTGCA 59.419 61.111 0.00 0.00 34.49 4.41
380 381 1.521010 CCACAGGAGATCGCTGCAG 60.521 63.158 10.11 10.11 34.49 4.41
381 382 2.172372 CACAGGAGATCGCTGCAGC 61.172 63.158 29.12 29.12 34.49 5.25
382 383 2.186125 CAGGAGATCGCTGCAGCA 59.814 61.111 36.03 23.76 42.21 4.41
383 384 1.227586 CAGGAGATCGCTGCAGCAT 60.228 57.895 36.03 26.98 42.21 3.79
384 385 0.814410 CAGGAGATCGCTGCAGCATT 60.814 55.000 36.03 23.45 42.21 3.56
385 386 0.532417 AGGAGATCGCTGCAGCATTC 60.532 55.000 36.03 29.18 42.21 2.67
386 387 0.532417 GGAGATCGCTGCAGCATTCT 60.532 55.000 36.03 32.78 42.21 2.40
387 388 0.582482 GAGATCGCTGCAGCATTCTG 59.418 55.000 33.18 20.96 42.21 3.02
397 398 3.194719 GCATTCTGCAGCCTCCAC 58.805 61.111 9.47 0.00 44.26 4.02
398 399 2.413142 GCATTCTGCAGCCTCCACC 61.413 63.158 9.47 0.00 44.26 4.61
399 400 1.001764 CATTCTGCAGCCTCCACCA 60.002 57.895 9.47 0.00 0.00 4.17
400 401 0.395311 CATTCTGCAGCCTCCACCAT 60.395 55.000 9.47 0.00 0.00 3.55
401 402 0.106819 ATTCTGCAGCCTCCACCATC 60.107 55.000 9.47 0.00 0.00 3.51
402 403 2.124403 CTGCAGCCTCCACCATCC 60.124 66.667 0.00 0.00 0.00 3.51
403 404 4.100084 TGCAGCCTCCACCATCCG 62.100 66.667 0.00 0.00 0.00 4.18
404 405 4.864334 GCAGCCTCCACCATCCGG 62.864 72.222 0.00 0.00 38.77 5.14
405 406 4.181010 CAGCCTCCACCATCCGGG 62.181 72.222 0.00 0.00 44.81 5.73
411 412 4.626081 CCACCATCCGGGCCGATC 62.626 72.222 30.79 0.00 42.05 3.69
412 413 3.860605 CACCATCCGGGCCGATCA 61.861 66.667 30.79 11.46 42.05 2.92
413 414 3.550431 ACCATCCGGGCCGATCAG 61.550 66.667 30.79 15.80 42.05 2.90
414 415 3.233980 CCATCCGGGCCGATCAGA 61.234 66.667 30.79 16.90 0.00 3.27
415 416 2.587247 CCATCCGGGCCGATCAGAT 61.587 63.158 30.79 18.57 0.00 2.90
416 417 1.079543 CATCCGGGCCGATCAGATC 60.080 63.158 30.79 0.00 0.00 2.75
417 418 1.229019 ATCCGGGCCGATCAGATCT 60.229 57.895 30.79 0.00 0.00 2.75
418 419 1.539560 ATCCGGGCCGATCAGATCTG 61.540 60.000 30.79 17.07 0.00 2.90
419 420 2.341543 CGGGCCGATCAGATCTGG 59.658 66.667 24.41 7.67 0.00 3.86
420 421 2.203082 CGGGCCGATCAGATCTGGA 61.203 63.158 24.41 9.81 0.00 3.86
421 422 1.539560 CGGGCCGATCAGATCTGGAT 61.540 60.000 24.41 13.99 0.00 3.41
422 423 0.036577 GGGCCGATCAGATCTGGATG 60.037 60.000 22.42 11.66 0.00 3.51
423 424 0.972134 GGCCGATCAGATCTGGATGA 59.028 55.000 22.42 3.75 0.00 2.92
424 425 1.337635 GGCCGATCAGATCTGGATGAC 60.338 57.143 22.42 9.69 0.00 3.06
425 426 1.342496 GCCGATCAGATCTGGATGACA 59.658 52.381 22.42 2.26 0.00 3.58
426 427 2.028294 GCCGATCAGATCTGGATGACAT 60.028 50.000 22.42 7.44 0.00 3.06
427 428 3.847542 CCGATCAGATCTGGATGACATC 58.152 50.000 22.42 14.75 0.00 3.06
437 438 3.995526 GATGACATCCATCGAGCCA 57.004 52.632 3.89 0.00 41.88 4.75
438 439 2.469274 GATGACATCCATCGAGCCAT 57.531 50.000 3.89 0.00 41.88 4.40
439 440 2.775890 GATGACATCCATCGAGCCATT 58.224 47.619 3.89 0.00 41.88 3.16
440 441 2.245159 TGACATCCATCGAGCCATTC 57.755 50.000 0.00 0.00 0.00 2.67
441 442 1.485895 TGACATCCATCGAGCCATTCA 59.514 47.619 0.00 0.00 0.00 2.57
442 443 2.141517 GACATCCATCGAGCCATTCAG 58.858 52.381 0.00 0.00 0.00 3.02
443 444 1.764723 ACATCCATCGAGCCATTCAGA 59.235 47.619 0.00 0.00 0.00 3.27
444 445 2.141517 CATCCATCGAGCCATTCAGAC 58.858 52.381 0.00 0.00 0.00 3.51
445 446 1.194218 TCCATCGAGCCATTCAGACA 58.806 50.000 0.00 0.00 0.00 3.41
446 447 1.764723 TCCATCGAGCCATTCAGACAT 59.235 47.619 0.00 0.00 0.00 3.06
447 448 1.871676 CCATCGAGCCATTCAGACATG 59.128 52.381 0.00 0.00 0.00 3.21
448 449 2.484241 CCATCGAGCCATTCAGACATGA 60.484 50.000 0.00 0.00 0.00 3.07
459 460 4.771590 TTCAGACATGAATCAGCAAACC 57.228 40.909 0.00 0.00 40.54 3.27
460 461 3.753815 TCAGACATGAATCAGCAAACCA 58.246 40.909 0.00 0.00 30.61 3.67
461 462 3.503363 TCAGACATGAATCAGCAAACCAC 59.497 43.478 0.00 0.00 30.61 4.16
462 463 2.485426 AGACATGAATCAGCAAACCACG 59.515 45.455 0.00 0.00 0.00 4.94
463 464 1.068333 ACATGAATCAGCAAACCACGC 60.068 47.619 0.00 0.00 0.00 5.34
464 465 1.200716 CATGAATCAGCAAACCACGCT 59.799 47.619 0.00 0.00 41.47 5.07
465 466 0.874390 TGAATCAGCAAACCACGCTC 59.126 50.000 0.00 0.00 37.72 5.03
466 467 0.179215 GAATCAGCAAACCACGCTCG 60.179 55.000 0.00 0.00 37.72 5.03
467 468 1.577328 AATCAGCAAACCACGCTCGG 61.577 55.000 0.00 0.00 37.72 4.63
468 469 3.726517 CAGCAAACCACGCTCGGG 61.727 66.667 0.00 0.00 37.72 5.14
469 470 4.250305 AGCAAACCACGCTCGGGT 62.250 61.111 0.00 0.00 41.41 5.28
470 471 3.723348 GCAAACCACGCTCGGGTC 61.723 66.667 3.60 0.00 37.77 4.46
471 472 3.411351 CAAACCACGCTCGGGTCG 61.411 66.667 0.00 0.00 37.77 4.79
472 473 3.608662 AAACCACGCTCGGGTCGA 61.609 61.111 6.13 0.00 37.77 4.20
473 474 2.939261 AAACCACGCTCGGGTCGAT 61.939 57.895 6.13 0.00 37.77 3.59
474 475 2.830704 AAACCACGCTCGGGTCGATC 62.831 60.000 6.13 0.00 37.77 3.69
478 479 2.248724 CGCTCGGGTCGATCGTAG 59.751 66.667 15.94 7.31 39.94 3.51
479 480 2.242572 CGCTCGGGTCGATCGTAGA 61.243 63.158 15.94 9.31 39.94 2.59
480 481 1.279238 GCTCGGGTCGATCGTAGAC 59.721 63.158 15.94 5.92 42.51 2.59
481 482 1.563655 CTCGGGTCGATCGTAGACG 59.436 63.158 15.94 15.03 42.51 4.18
491 492 4.486090 CGTAGACGACGCCGATAC 57.514 61.111 0.00 0.00 46.27 2.24
492 493 1.930100 CGTAGACGACGCCGATACT 59.070 57.895 0.00 0.00 46.27 2.12
493 494 0.382758 CGTAGACGACGCCGATACTG 60.383 60.000 0.00 0.00 46.27 2.74
494 495 0.933097 GTAGACGACGCCGATACTGA 59.067 55.000 0.00 0.00 39.50 3.41
495 496 1.328680 GTAGACGACGCCGATACTGAA 59.671 52.381 0.00 0.00 39.50 3.02
496 497 1.022735 AGACGACGCCGATACTGAAT 58.977 50.000 0.00 0.00 39.50 2.57
497 498 2.216046 AGACGACGCCGATACTGAATA 58.784 47.619 0.00 0.00 39.50 1.75
498 499 2.032204 AGACGACGCCGATACTGAATAC 60.032 50.000 0.00 0.00 39.50 1.89
499 500 1.945394 ACGACGCCGATACTGAATACT 59.055 47.619 0.00 0.00 39.50 2.12
500 501 2.032204 ACGACGCCGATACTGAATACTC 60.032 50.000 0.00 0.00 39.50 2.59
501 502 2.664971 CGACGCCGATACTGAATACTCC 60.665 54.545 0.00 0.00 38.22 3.85
502 503 2.292569 GACGCCGATACTGAATACTCCA 59.707 50.000 0.00 0.00 0.00 3.86
503 504 2.293677 ACGCCGATACTGAATACTCCAG 59.706 50.000 0.00 0.00 37.64 3.86
504 505 2.678324 GCCGATACTGAATACTCCAGC 58.322 52.381 0.00 0.00 35.14 4.85
505 506 2.610727 GCCGATACTGAATACTCCAGCC 60.611 54.545 0.00 0.00 35.14 4.85
506 507 2.628178 CCGATACTGAATACTCCAGCCA 59.372 50.000 0.00 0.00 35.14 4.75
517 518 1.341581 ACTCCAGCCAGGTACTCTCTC 60.342 57.143 0.00 0.00 34.60 3.20
524 525 0.107800 CAGGTACTCTCTCCGTCCGA 60.108 60.000 0.00 0.00 34.60 4.55
530 531 3.779271 ACTCTCTCCGTCCGAAATTAC 57.221 47.619 0.00 0.00 0.00 1.89
535 536 4.021719 TCTCTCCGTCCGAAATTACTTGTT 60.022 41.667 0.00 0.00 0.00 2.83
537 538 3.731089 TCCGTCCGAAATTACTTGTTGT 58.269 40.909 0.00 0.00 0.00 3.32
543 544 7.360607 CCGTCCGAAATTACTTGTTGTAGAAAT 60.361 37.037 0.00 0.00 32.08 2.17
544 545 8.013378 CGTCCGAAATTACTTGTTGTAGAAATT 58.987 33.333 0.00 0.00 32.08 1.82
547 548 9.840427 CCGAAATTACTTGTTGTAGAAATTGAT 57.160 29.630 0.00 0.00 32.08 2.57
625 633 5.681880 CCTACGCTTTTGAACGAACAATTA 58.318 37.500 0.00 0.00 0.00 1.40
702 724 0.824109 TGAAGTGCACCCCTATCTCG 59.176 55.000 14.63 0.00 0.00 4.04
741 763 5.603596 TGCAAATCAAAGCAAAGTTCAGAT 58.396 33.333 0.00 0.00 37.90 2.90
758 780 1.768870 AGATGGTATTCGGGGAAGTGG 59.231 52.381 0.00 0.00 0.00 4.00
759 781 1.489230 GATGGTATTCGGGGAAGTGGT 59.511 52.381 0.00 0.00 0.00 4.16
760 782 0.906775 TGGTATTCGGGGAAGTGGTC 59.093 55.000 0.00 0.00 0.00 4.02
766 788 3.319198 GGGGAAGTGGTCCTCGCA 61.319 66.667 0.00 0.00 46.92 5.10
767 789 2.266055 GGGAAGTGGTCCTCGCAG 59.734 66.667 0.00 0.00 46.92 5.18
768 790 2.283529 GGGAAGTGGTCCTCGCAGA 61.284 63.158 0.00 0.00 46.92 4.26
769 791 1.079750 GGAAGTGGTCCTCGCAGAC 60.080 63.158 0.00 0.00 43.98 3.51
770 792 1.444553 GAAGTGGTCCTCGCAGACG 60.445 63.158 0.00 0.00 37.66 4.18
771 793 2.143594 GAAGTGGTCCTCGCAGACGT 62.144 60.000 0.00 0.00 41.18 4.34
772 794 1.745320 AAGTGGTCCTCGCAGACGTT 61.745 55.000 0.00 0.00 41.18 3.99
773 795 0.892358 AGTGGTCCTCGCAGACGTTA 60.892 55.000 0.00 0.00 41.18 3.18
774 796 0.172803 GTGGTCCTCGCAGACGTTAT 59.827 55.000 0.00 0.00 41.18 1.89
775 797 0.892755 TGGTCCTCGCAGACGTTATT 59.107 50.000 0.00 0.00 41.18 1.40
776 798 1.274167 TGGTCCTCGCAGACGTTATTT 59.726 47.619 0.00 0.00 41.18 1.40
888 918 1.838112 CAGACTCTGCAGACCTCTCT 58.162 55.000 13.74 7.43 0.00 3.10
889 919 1.745087 CAGACTCTGCAGACCTCTCTC 59.255 57.143 13.74 0.83 0.00 3.20
915 945 8.107399 TGGATTCACCTACATATAGAGTTACG 57.893 38.462 0.00 0.00 39.86 3.18
916 946 7.176165 TGGATTCACCTACATATAGAGTTACGG 59.824 40.741 0.00 0.00 39.86 4.02
917 947 7.392673 GGATTCACCTACATATAGAGTTACGGA 59.607 40.741 0.00 0.00 35.41 4.69
918 948 7.741027 TTCACCTACATATAGAGTTACGGAG 57.259 40.000 0.00 0.00 0.00 4.63
919 949 7.071069 TCACCTACATATAGAGTTACGGAGA 57.929 40.000 0.00 0.00 0.00 3.71
920 950 7.160049 TCACCTACATATAGAGTTACGGAGAG 58.840 42.308 0.00 0.00 0.00 3.20
921 951 6.935771 CACCTACATATAGAGTTACGGAGAGT 59.064 42.308 0.00 0.00 0.00 3.24
922 952 7.118101 CACCTACATATAGAGTTACGGAGAGTC 59.882 44.444 0.00 0.00 0.00 3.36
923 953 6.310956 CCTACATATAGAGTTACGGAGAGTCG 59.689 46.154 0.00 0.00 0.00 4.18
947 977 0.744414 CCATGAACCTTCGTCCGCAT 60.744 55.000 0.00 0.00 0.00 4.73
984 1014 2.614779 CTATCATCGCTTCATCGGCAT 58.385 47.619 0.00 0.00 0.00 4.40
1632 1683 1.153881 GGGCCTGTTCGACTACGTC 60.154 63.158 0.84 0.00 40.69 4.34
1851 1924 1.613836 AGTCGAAGAAGTACGGTGGT 58.386 50.000 0.00 0.00 39.69 4.16
1887 1960 2.758979 GAGGTTCTACGATGGGAAGACA 59.241 50.000 0.00 0.00 0.00 3.41
1937 2011 2.761767 TGTGAGCTGGTATTAACGGCTA 59.238 45.455 14.99 0.00 36.13 3.93
1965 2039 0.620556 GGGTCAGGGATCAAGAGCAA 59.379 55.000 11.04 0.00 0.00 3.91
2135 2209 9.594478 AAACTTTGTAAAATTCGATCAGGTTTT 57.406 25.926 0.00 0.00 0.00 2.43
2144 2218 7.566858 AATTCGATCAGGTTTTTGAAAATCG 57.433 32.000 3.49 3.49 34.26 3.34
2189 2265 3.680620 TTGCGGAAGATGGGGCTCG 62.681 63.158 0.00 0.00 0.00 5.03
2202 2278 2.027751 GCTCGTGGGCGGATAGAC 59.972 66.667 0.00 0.00 38.89 2.59
2239 2315 3.866582 GTGATGGGGGAGCTCCGG 61.867 72.222 26.36 0.00 36.71 5.14
2308 2384 7.254421 CCTTCAAATTTCTGGTTGTAGTTTTGC 60.254 37.037 0.00 0.00 0.00 3.68
2404 2483 2.159099 TCATCCTCGTGTATGTTCTGCC 60.159 50.000 0.00 0.00 0.00 4.85
2408 2487 1.995484 CTCGTGTATGTTCTGCCACAG 59.005 52.381 0.00 0.00 0.00 3.66
2418 2497 1.347062 TCTGCCACAGTACACATGGA 58.653 50.000 12.79 0.28 35.33 3.41
2453 2532 2.596904 ATTCTGGCTCATTGCAATGC 57.403 45.000 30.57 21.30 45.15 3.56
2493 2572 5.663456 AGTTTTTAGTGTTGTCGACCTGTA 58.337 37.500 14.12 0.00 0.00 2.74
2517 2596 3.521560 TGATGTCGGTTCTATGTTGCTC 58.478 45.455 0.00 0.00 0.00 4.26
2679 2758 8.999431 GTTGATGTTCCATAAGTAGAAGAAACA 58.001 33.333 0.00 0.00 0.00 2.83
2685 2764 8.784043 GTTCCATAAGTAGAAGAAACATGTTGT 58.216 33.333 12.82 2.32 0.00 3.32
2699 2778 8.982723 AGAAACATGTTGTAGTATGGATAGACT 58.017 33.333 12.82 0.00 32.23 3.24
2899 2978 5.124776 GCCACATATTAAGTAGCACAAACCA 59.875 40.000 0.00 0.00 0.00 3.67
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.011738 CCTGACTCTAACCTTAGTTGTTGGA 59.988 44.000 0.00 0.00 36.68 3.53
1 2 5.238583 CCTGACTCTAACCTTAGTTGTTGG 58.761 45.833 0.00 0.00 36.68 3.77
2 3 5.221661 ACCCTGACTCTAACCTTAGTTGTTG 60.222 44.000 0.00 0.00 36.68 3.33
3 4 4.906060 ACCCTGACTCTAACCTTAGTTGTT 59.094 41.667 0.00 0.00 36.68 2.83
4 5 4.490706 ACCCTGACTCTAACCTTAGTTGT 58.509 43.478 0.00 0.00 36.68 3.32
5 6 5.485209 AACCCTGACTCTAACCTTAGTTG 57.515 43.478 0.00 0.00 36.68 3.16
6 7 6.100714 TGAAAACCCTGACTCTAACCTTAGTT 59.899 38.462 0.00 0.00 40.15 2.24
7 8 5.605488 TGAAAACCCTGACTCTAACCTTAGT 59.395 40.000 0.00 0.00 32.61 2.24
8 9 5.932883 GTGAAAACCCTGACTCTAACCTTAG 59.067 44.000 0.00 0.00 0.00 2.18
9 10 5.221783 GGTGAAAACCCTGACTCTAACCTTA 60.222 44.000 0.00 0.00 0.00 2.69
10 11 4.445879 GGTGAAAACCCTGACTCTAACCTT 60.446 45.833 0.00 0.00 0.00 3.50
11 12 3.072622 GGTGAAAACCCTGACTCTAACCT 59.927 47.826 0.00 0.00 0.00 3.50
12 13 3.409570 GGTGAAAACCCTGACTCTAACC 58.590 50.000 0.00 0.00 0.00 2.85
13 14 3.409570 GGGTGAAAACCCTGACTCTAAC 58.590 50.000 6.68 0.00 46.39 2.34
14 15 3.782656 GGGTGAAAACCCTGACTCTAA 57.217 47.619 6.68 0.00 46.39 2.10
24 25 4.773323 CTGATTCTTCAGGGTGAAAACC 57.227 45.455 0.00 0.00 44.78 3.27
35 36 7.666063 TGGATTATCTCAGACTGATTCTTCA 57.334 36.000 5.42 0.00 28.96 3.02
36 37 7.171337 GCTTGGATTATCTCAGACTGATTCTTC 59.829 40.741 5.42 0.47 28.96 2.87
37 38 6.991531 GCTTGGATTATCTCAGACTGATTCTT 59.008 38.462 5.42 0.00 28.96 2.52
38 39 6.099413 TGCTTGGATTATCTCAGACTGATTCT 59.901 38.462 5.42 0.00 33.33 2.40
39 40 6.286758 TGCTTGGATTATCTCAGACTGATTC 58.713 40.000 5.42 0.00 0.00 2.52
40 41 6.244552 TGCTTGGATTATCTCAGACTGATT 57.755 37.500 5.42 0.00 0.00 2.57
41 42 5.883685 TGCTTGGATTATCTCAGACTGAT 57.116 39.130 5.42 0.00 0.00 2.90
42 43 5.682234 TTGCTTGGATTATCTCAGACTGA 57.318 39.130 4.78 4.78 0.00 3.41
43 44 5.277876 GCATTGCTTGGATTATCTCAGACTG 60.278 44.000 0.16 0.00 0.00 3.51
44 45 4.820716 GCATTGCTTGGATTATCTCAGACT 59.179 41.667 0.16 0.00 0.00 3.24
45 46 4.023365 GGCATTGCTTGGATTATCTCAGAC 60.023 45.833 8.82 0.00 0.00 3.51
46 47 4.139786 GGCATTGCTTGGATTATCTCAGA 58.860 43.478 8.82 0.00 0.00 3.27
47 48 4.142790 AGGCATTGCTTGGATTATCTCAG 58.857 43.478 8.82 0.00 0.00 3.35
48 49 4.174704 AGGCATTGCTTGGATTATCTCA 57.825 40.909 8.82 0.00 0.00 3.27
49 50 4.581824 TGAAGGCATTGCTTGGATTATCTC 59.418 41.667 8.82 0.00 0.00 2.75
50 51 4.539726 TGAAGGCATTGCTTGGATTATCT 58.460 39.130 8.82 0.00 0.00 1.98
51 52 4.924305 TGAAGGCATTGCTTGGATTATC 57.076 40.909 8.82 0.00 0.00 1.75
52 53 5.881923 ATTGAAGGCATTGCTTGGATTAT 57.118 34.783 8.82 0.00 0.00 1.28
53 54 6.183360 CCTTATTGAAGGCATTGCTTGGATTA 60.183 38.462 8.82 0.00 45.91 1.75
54 55 5.395990 CCTTATTGAAGGCATTGCTTGGATT 60.396 40.000 8.82 0.00 45.91 3.01
55 56 4.100498 CCTTATTGAAGGCATTGCTTGGAT 59.900 41.667 8.82 0.00 45.91 3.41
56 57 3.448301 CCTTATTGAAGGCATTGCTTGGA 59.552 43.478 8.82 0.00 45.91 3.53
57 58 3.788937 CCTTATTGAAGGCATTGCTTGG 58.211 45.455 8.82 0.00 45.91 3.61
68 69 6.693545 TGTTTTGCGTTGTTACCTTATTGAAG 59.306 34.615 0.00 0.00 0.00 3.02
69 70 6.561614 TGTTTTGCGTTGTTACCTTATTGAA 58.438 32.000 0.00 0.00 0.00 2.69
70 71 6.132791 TGTTTTGCGTTGTTACCTTATTGA 57.867 33.333 0.00 0.00 0.00 2.57
71 72 6.558795 CGTTGTTTTGCGTTGTTACCTTATTG 60.559 38.462 0.00 0.00 0.00 1.90
72 73 5.456173 CGTTGTTTTGCGTTGTTACCTTATT 59.544 36.000 0.00 0.00 0.00 1.40
73 74 4.971220 CGTTGTTTTGCGTTGTTACCTTAT 59.029 37.500 0.00 0.00 0.00 1.73
74 75 4.142730 ACGTTGTTTTGCGTTGTTACCTTA 60.143 37.500 0.00 0.00 38.21 2.69
75 76 3.172824 CGTTGTTTTGCGTTGTTACCTT 58.827 40.909 0.00 0.00 0.00 3.50
76 77 2.162008 ACGTTGTTTTGCGTTGTTACCT 59.838 40.909 0.00 0.00 38.21 3.08
77 78 2.517935 ACGTTGTTTTGCGTTGTTACC 58.482 42.857 0.00 0.00 38.21 2.85
78 79 2.209393 CGACGTTGTTTTGCGTTGTTAC 59.791 45.455 0.00 0.00 41.70 2.50
79 80 2.429061 CGACGTTGTTTTGCGTTGTTA 58.571 42.857 0.00 0.00 41.70 2.41
80 81 1.252235 CGACGTTGTTTTGCGTTGTT 58.748 45.000 0.00 0.00 41.70 2.83
81 82 1.129301 GCGACGTTGTTTTGCGTTGT 61.129 50.000 4.37 0.00 42.57 3.32
82 83 1.546673 GCGACGTTGTTTTGCGTTG 59.453 52.632 4.37 0.00 41.70 4.10
83 84 1.584225 GGCGACGTTGTTTTGCGTT 60.584 52.632 4.37 0.00 41.70 4.84
84 85 2.023601 GGCGACGTTGTTTTGCGT 59.976 55.556 4.37 0.00 44.50 5.24
85 86 0.932585 AATGGCGACGTTGTTTTGCG 60.933 50.000 4.37 0.00 38.40 4.85
86 87 2.880091 AATGGCGACGTTGTTTTGC 58.120 47.368 4.37 0.00 38.40 3.68
93 94 0.392461 ATACCTGCAATGGCGACGTT 60.392 50.000 0.00 0.00 45.35 3.99
94 95 0.462375 TATACCTGCAATGGCGACGT 59.538 50.000 0.00 0.00 45.35 4.34
95 96 1.260561 GTTATACCTGCAATGGCGACG 59.739 52.381 0.00 0.00 45.35 5.12
96 97 1.602377 GGTTATACCTGCAATGGCGAC 59.398 52.381 0.00 0.00 45.35 5.19
97 98 1.210722 TGGTTATACCTGCAATGGCGA 59.789 47.619 0.00 0.00 39.58 5.54
98 99 1.674359 TGGTTATACCTGCAATGGCG 58.326 50.000 0.00 0.00 39.58 5.69
99 100 3.023832 AGTTGGTTATACCTGCAATGGC 58.976 45.455 0.00 0.00 39.58 4.40
100 101 3.312421 CGAGTTGGTTATACCTGCAATGG 59.688 47.826 0.00 0.00 39.58 3.16
101 102 3.312421 CCGAGTTGGTTATACCTGCAATG 59.688 47.826 0.00 0.00 39.58 2.82
102 103 3.541632 CCGAGTTGGTTATACCTGCAAT 58.458 45.455 0.00 0.00 39.58 3.56
103 104 2.355310 CCCGAGTTGGTTATACCTGCAA 60.355 50.000 0.00 0.00 39.58 4.08
104 105 1.208535 CCCGAGTTGGTTATACCTGCA 59.791 52.381 0.00 0.00 39.58 4.41
105 106 1.949465 CCCGAGTTGGTTATACCTGC 58.051 55.000 0.00 0.00 39.58 4.85
106 107 1.208535 TGCCCGAGTTGGTTATACCTG 59.791 52.381 0.00 0.00 39.58 4.00
107 108 1.485066 CTGCCCGAGTTGGTTATACCT 59.515 52.381 0.00 0.00 39.58 3.08
108 109 1.483415 TCTGCCCGAGTTGGTTATACC 59.517 52.381 0.00 0.00 39.22 2.73
109 110 2.547826 GTCTGCCCGAGTTGGTTATAC 58.452 52.381 0.00 0.00 35.15 1.47
110 111 1.483415 GGTCTGCCCGAGTTGGTTATA 59.517 52.381 0.00 0.00 35.15 0.98
111 112 0.252197 GGTCTGCCCGAGTTGGTTAT 59.748 55.000 0.00 0.00 35.15 1.89
112 113 0.834687 AGGTCTGCCCGAGTTGGTTA 60.835 55.000 0.00 0.00 38.74 2.85
113 114 0.834687 TAGGTCTGCCCGAGTTGGTT 60.835 55.000 0.00 0.00 38.74 3.67
114 115 1.229082 TAGGTCTGCCCGAGTTGGT 60.229 57.895 0.00 0.00 38.74 3.67
115 116 1.517832 CTAGGTCTGCCCGAGTTGG 59.482 63.158 0.00 0.00 38.74 3.77
116 117 0.970937 TCCTAGGTCTGCCCGAGTTG 60.971 60.000 9.08 0.00 38.74 3.16
117 118 0.032017 ATCCTAGGTCTGCCCGAGTT 60.032 55.000 9.08 0.00 38.74 3.01
118 119 0.032017 AATCCTAGGTCTGCCCGAGT 60.032 55.000 9.08 0.00 38.74 4.18
119 120 1.069358 GAAATCCTAGGTCTGCCCGAG 59.931 57.143 9.08 0.00 38.74 4.63
120 121 1.120530 GAAATCCTAGGTCTGCCCGA 58.879 55.000 9.08 0.00 38.74 5.14
121 122 0.830648 TGAAATCCTAGGTCTGCCCG 59.169 55.000 9.08 0.00 38.74 6.13
122 123 1.134068 GGTGAAATCCTAGGTCTGCCC 60.134 57.143 9.08 0.00 34.57 5.36
123 124 1.134068 GGGTGAAATCCTAGGTCTGCC 60.134 57.143 9.08 6.16 0.00 4.85
124 125 1.840635 AGGGTGAAATCCTAGGTCTGC 59.159 52.381 9.08 0.00 31.86 4.26
125 126 3.107601 TCAGGGTGAAATCCTAGGTCTG 58.892 50.000 9.08 5.49 32.49 3.51
126 127 3.491766 TCAGGGTGAAATCCTAGGTCT 57.508 47.619 9.08 0.00 32.49 3.85
127 128 4.410555 AGATTCAGGGTGAAATCCTAGGTC 59.589 45.833 9.08 0.00 40.12 3.85
128 129 4.375313 AGATTCAGGGTGAAATCCTAGGT 58.625 43.478 9.08 0.00 40.12 3.08
129 130 4.502259 CGAGATTCAGGGTGAAATCCTAGG 60.502 50.000 0.82 0.82 40.12 3.02
130 131 4.342378 TCGAGATTCAGGGTGAAATCCTAG 59.658 45.833 0.00 0.00 40.12 3.02
131 132 4.286707 TCGAGATTCAGGGTGAAATCCTA 58.713 43.478 0.00 0.00 40.12 2.94
132 133 3.107601 TCGAGATTCAGGGTGAAATCCT 58.892 45.455 0.00 0.00 40.12 3.24
133 134 3.133003 TCTCGAGATTCAGGGTGAAATCC 59.867 47.826 12.08 0.00 40.12 3.01
134 135 4.116238 GTCTCGAGATTCAGGGTGAAATC 58.884 47.826 19.90 0.00 40.12 2.17
135 136 3.772025 AGTCTCGAGATTCAGGGTGAAAT 59.228 43.478 19.90 0.00 40.12 2.17
136 137 3.056536 CAGTCTCGAGATTCAGGGTGAAA 60.057 47.826 19.90 0.00 40.12 2.69
137 138 2.493675 CAGTCTCGAGATTCAGGGTGAA 59.506 50.000 19.90 0.00 41.09 3.18
138 139 2.095461 CAGTCTCGAGATTCAGGGTGA 58.905 52.381 19.90 0.00 0.00 4.02
139 140 1.135915 CCAGTCTCGAGATTCAGGGTG 59.864 57.143 19.90 7.58 0.00 4.61
140 141 1.479709 CCAGTCTCGAGATTCAGGGT 58.520 55.000 19.90 0.00 0.00 4.34
141 142 0.749649 CCCAGTCTCGAGATTCAGGG 59.250 60.000 19.90 21.20 0.00 4.45
142 143 1.135915 CACCCAGTCTCGAGATTCAGG 59.864 57.143 19.90 18.40 0.00 3.86
143 144 1.470632 GCACCCAGTCTCGAGATTCAG 60.471 57.143 19.90 10.06 0.00 3.02
144 145 0.532573 GCACCCAGTCTCGAGATTCA 59.467 55.000 19.90 0.00 0.00 2.57
145 146 0.179097 GGCACCCAGTCTCGAGATTC 60.179 60.000 19.90 6.68 0.00 2.52
146 147 1.901085 GGCACCCAGTCTCGAGATT 59.099 57.895 19.90 12.17 0.00 2.40
147 148 3.622514 GGCACCCAGTCTCGAGAT 58.377 61.111 19.90 4.96 0.00 2.75
160 161 1.153429 GATGGTGTCCTACGGGCAC 60.153 63.158 9.06 9.06 38.22 5.01
161 162 1.610967 TGATGGTGTCCTACGGGCA 60.611 57.895 0.00 0.00 0.00 5.36
162 163 1.153429 GTGATGGTGTCCTACGGGC 60.153 63.158 0.00 0.00 0.00 6.13
163 164 0.175760 CTGTGATGGTGTCCTACGGG 59.824 60.000 0.00 0.00 0.00 5.28
164 165 0.895530 ACTGTGATGGTGTCCTACGG 59.104 55.000 0.00 0.00 0.00 4.02
165 166 1.544246 TGACTGTGATGGTGTCCTACG 59.456 52.381 0.00 0.00 0.00 3.51
166 167 2.563179 AGTGACTGTGATGGTGTCCTAC 59.437 50.000 0.00 0.00 0.00 3.18
167 168 2.826128 GAGTGACTGTGATGGTGTCCTA 59.174 50.000 0.00 0.00 0.00 2.94
168 169 1.620819 GAGTGACTGTGATGGTGTCCT 59.379 52.381 0.00 0.00 0.00 3.85
169 170 1.670087 CGAGTGACTGTGATGGTGTCC 60.670 57.143 0.00 0.00 0.00 4.02
170 171 1.000163 ACGAGTGACTGTGATGGTGTC 60.000 52.381 0.00 0.00 0.00 3.67
171 172 1.040646 ACGAGTGACTGTGATGGTGT 58.959 50.000 0.00 0.00 0.00 4.16
172 173 1.269778 ACACGAGTGACTGTGATGGTG 60.270 52.381 17.67 3.05 39.38 4.17
173 174 1.040646 ACACGAGTGACTGTGATGGT 58.959 50.000 17.67 0.00 39.38 3.55
174 175 2.229062 ACTACACGAGTGACTGTGATGG 59.771 50.000 17.67 10.97 36.87 3.51
175 176 3.493272 GACTACACGAGTGACTGTGATG 58.507 50.000 17.67 12.69 39.06 3.07
176 177 2.159824 CGACTACACGAGTGACTGTGAT 59.840 50.000 17.67 8.07 39.06 3.06
177 178 1.529865 CGACTACACGAGTGACTGTGA 59.470 52.381 17.67 5.30 39.06 3.58
178 179 1.951792 CGACTACACGAGTGACTGTG 58.048 55.000 10.50 11.71 39.06 3.66
179 180 0.237761 GCGACTACACGAGTGACTGT 59.762 55.000 10.50 5.41 39.06 3.55
180 181 0.454620 GGCGACTACACGAGTGACTG 60.455 60.000 10.50 2.39 39.06 3.51
181 182 0.887836 TGGCGACTACACGAGTGACT 60.888 55.000 10.50 0.00 39.06 3.41
182 183 0.728466 GTGGCGACTACACGAGTGAC 60.728 60.000 10.50 0.00 39.06 3.67
183 184 1.577922 GTGGCGACTACACGAGTGA 59.422 57.895 10.50 0.00 39.06 3.41
184 185 1.443872 GGTGGCGACTACACGAGTG 60.444 63.158 0.00 1.13 39.06 3.51
185 186 1.900016 TGGTGGCGACTACACGAGT 60.900 57.895 0.00 0.00 42.90 4.18
186 187 1.443872 GTGGTGGCGACTACACGAG 60.444 63.158 10.46 0.00 39.69 4.18
187 188 1.457823 AAGTGGTGGCGACTACACGA 61.458 55.000 17.16 0.00 40.81 4.35
188 189 0.599204 AAAGTGGTGGCGACTACACG 60.599 55.000 17.16 0.00 40.81 4.49
189 190 1.589803 AAAAGTGGTGGCGACTACAC 58.410 50.000 17.16 8.87 36.05 2.90
190 191 2.215196 GAAAAAGTGGTGGCGACTACA 58.785 47.619 17.16 0.00 36.05 2.74
191 192 1.193874 CGAAAAAGTGGTGGCGACTAC 59.806 52.381 7.28 7.28 33.82 2.73
192 193 1.504359 CGAAAAAGTGGTGGCGACTA 58.496 50.000 0.00 0.00 0.00 2.59
193 194 1.782028 GCGAAAAAGTGGTGGCGACT 61.782 55.000 0.00 0.00 0.00 4.18
194 195 1.370051 GCGAAAAAGTGGTGGCGAC 60.370 57.895 0.00 0.00 0.00 5.19
195 196 2.887889 CGCGAAAAAGTGGTGGCGA 61.888 57.895 0.00 0.00 45.83 5.54
196 197 2.182614 ATCGCGAAAAAGTGGTGGCG 62.183 55.000 15.24 0.00 44.47 5.69
197 198 0.454452 GATCGCGAAAAAGTGGTGGC 60.454 55.000 15.24 0.00 0.00 5.01
198 199 1.128692 GAGATCGCGAAAAAGTGGTGG 59.871 52.381 15.24 0.00 0.00 4.61
199 200 1.798223 TGAGATCGCGAAAAAGTGGTG 59.202 47.619 15.24 0.00 0.00 4.17
200 201 2.069273 CTGAGATCGCGAAAAAGTGGT 58.931 47.619 15.24 0.00 0.00 4.16
201 202 1.201965 GCTGAGATCGCGAAAAAGTGG 60.202 52.381 15.24 1.57 0.00 4.00
202 203 1.460743 TGCTGAGATCGCGAAAAAGTG 59.539 47.619 15.24 3.33 0.00 3.16
203 204 1.795768 TGCTGAGATCGCGAAAAAGT 58.204 45.000 15.24 0.00 0.00 2.66
204 205 2.158449 AGTTGCTGAGATCGCGAAAAAG 59.842 45.455 15.24 10.00 0.00 2.27
205 206 2.143122 AGTTGCTGAGATCGCGAAAAA 58.857 42.857 15.24 0.00 0.00 1.94
206 207 1.795768 AGTTGCTGAGATCGCGAAAA 58.204 45.000 15.24 0.00 0.00 2.29
207 208 2.094700 AGTAGTTGCTGAGATCGCGAAA 60.095 45.455 15.24 0.00 0.00 3.46
208 209 1.472878 AGTAGTTGCTGAGATCGCGAA 59.527 47.619 15.24 0.00 0.00 4.70
209 210 1.064208 GAGTAGTTGCTGAGATCGCGA 59.936 52.381 13.09 13.09 0.00 5.87
210 211 1.471964 GAGTAGTTGCTGAGATCGCG 58.528 55.000 0.00 0.00 0.00 5.87
211 212 1.202200 ACGAGTAGTTGCTGAGATCGC 60.202 52.381 0.00 0.00 32.22 4.58
212 213 2.710760 GACGAGTAGTTGCTGAGATCG 58.289 52.381 0.00 0.00 35.00 3.69
213 214 2.710760 CGACGAGTAGTTGCTGAGATC 58.289 52.381 0.00 0.00 0.00 2.75
214 215 2.834574 CGACGAGTAGTTGCTGAGAT 57.165 50.000 0.00 0.00 0.00 2.75
232 233 4.465512 GATGGTTGTGCAGCGGCG 62.466 66.667 0.51 0.51 45.35 6.46
233 234 4.120331 GGATGGTTGTGCAGCGGC 62.120 66.667 0.31 0.31 41.68 6.53
234 235 3.443045 GGGATGGTTGTGCAGCGG 61.443 66.667 0.00 0.00 0.00 5.52
235 236 2.360350 AGGGATGGTTGTGCAGCG 60.360 61.111 0.00 0.00 0.00 5.18
236 237 1.001641 AGAGGGATGGTTGTGCAGC 60.002 57.895 0.00 0.00 0.00 5.25
237 238 1.310933 GCAGAGGGATGGTTGTGCAG 61.311 60.000 0.00 0.00 34.11 4.41
238 239 1.303561 GCAGAGGGATGGTTGTGCA 60.304 57.895 0.00 0.00 34.11 4.57
239 240 2.401766 CGCAGAGGGATGGTTGTGC 61.402 63.158 0.00 0.00 0.00 4.57
240 241 1.003355 ACGCAGAGGGATGGTTGTG 60.003 57.895 0.00 0.00 0.00 3.33
241 242 1.296715 GACGCAGAGGGATGGTTGT 59.703 57.895 0.00 0.00 0.00 3.32
242 243 0.321564 TTGACGCAGAGGGATGGTTG 60.322 55.000 0.00 0.00 0.00 3.77
243 244 0.036010 CTTGACGCAGAGGGATGGTT 60.036 55.000 0.00 0.00 0.00 3.67
244 245 1.194781 ACTTGACGCAGAGGGATGGT 61.195 55.000 0.00 0.00 0.00 3.55
245 246 0.460987 GACTTGACGCAGAGGGATGG 60.461 60.000 0.00 0.00 0.00 3.51
246 247 0.534412 AGACTTGACGCAGAGGGATG 59.466 55.000 0.00 0.00 0.00 3.51
247 248 1.270907 AAGACTTGACGCAGAGGGAT 58.729 50.000 0.00 0.00 0.00 3.85
248 249 1.048601 AAAGACTTGACGCAGAGGGA 58.951 50.000 0.00 0.00 0.00 4.20
249 250 1.151668 CAAAGACTTGACGCAGAGGG 58.848 55.000 0.00 0.00 34.14 4.30
250 251 1.795286 GACAAAGACTTGACGCAGAGG 59.205 52.381 0.00 0.00 36.33 3.69
251 252 1.795286 GGACAAAGACTTGACGCAGAG 59.205 52.381 0.00 0.00 36.33 3.35
252 253 1.138069 TGGACAAAGACTTGACGCAGA 59.862 47.619 0.00 0.00 36.33 4.26
253 254 1.581934 TGGACAAAGACTTGACGCAG 58.418 50.000 0.00 0.00 36.33 5.18
254 255 2.254546 ATGGACAAAGACTTGACGCA 57.745 45.000 0.00 0.00 36.33 5.24
255 256 3.326747 ACTATGGACAAAGACTTGACGC 58.673 45.455 0.00 0.00 36.33 5.19
256 257 5.679906 CAAACTATGGACAAAGACTTGACG 58.320 41.667 0.00 0.00 36.33 4.35
257 258 5.008613 TGCAAACTATGGACAAAGACTTGAC 59.991 40.000 0.00 0.00 36.33 3.18
258 259 5.129634 TGCAAACTATGGACAAAGACTTGA 58.870 37.500 0.00 0.00 36.33 3.02
259 260 5.437289 TGCAAACTATGGACAAAGACTTG 57.563 39.130 0.00 0.00 38.61 3.16
260 261 6.006449 AGATGCAAACTATGGACAAAGACTT 58.994 36.000 0.00 0.00 29.34 3.01
261 262 5.564550 AGATGCAAACTATGGACAAAGACT 58.435 37.500 0.00 0.00 29.34 3.24
262 263 5.412594 TGAGATGCAAACTATGGACAAAGAC 59.587 40.000 0.00 0.00 29.34 3.01
263 264 5.412594 GTGAGATGCAAACTATGGACAAAGA 59.587 40.000 0.00 0.00 29.34 2.52
264 265 5.392380 GGTGAGATGCAAACTATGGACAAAG 60.392 44.000 0.00 0.00 29.34 2.77
265 266 4.458989 GGTGAGATGCAAACTATGGACAAA 59.541 41.667 0.00 0.00 29.34 2.83
266 267 4.009675 GGTGAGATGCAAACTATGGACAA 58.990 43.478 0.00 0.00 29.34 3.18
267 268 3.609853 GGTGAGATGCAAACTATGGACA 58.390 45.455 0.00 0.00 29.34 4.02
268 269 2.609459 CGGTGAGATGCAAACTATGGAC 59.391 50.000 0.00 0.00 29.34 4.02
269 270 2.905075 CGGTGAGATGCAAACTATGGA 58.095 47.619 0.00 0.00 0.00 3.41
270 271 1.331756 GCGGTGAGATGCAAACTATGG 59.668 52.381 0.00 0.00 0.00 2.74
271 272 1.331756 GGCGGTGAGATGCAAACTATG 59.668 52.381 0.00 0.00 0.00 2.23
272 273 1.668419 GGCGGTGAGATGCAAACTAT 58.332 50.000 0.00 0.00 0.00 2.12
273 274 0.739462 CGGCGGTGAGATGCAAACTA 60.739 55.000 0.00 0.00 0.00 2.24
274 275 2.034879 CGGCGGTGAGATGCAAACT 61.035 57.895 0.00 0.00 0.00 2.66
275 276 1.573829 TTCGGCGGTGAGATGCAAAC 61.574 55.000 7.21 0.00 0.00 2.93
276 277 1.298157 CTTCGGCGGTGAGATGCAAA 61.298 55.000 7.21 0.00 0.00 3.68
277 278 1.741401 CTTCGGCGGTGAGATGCAA 60.741 57.895 7.21 0.00 0.00 4.08
278 279 2.125552 CTTCGGCGGTGAGATGCA 60.126 61.111 7.21 0.00 0.00 3.96
279 280 2.125512 ACTTCGGCGGTGAGATGC 60.126 61.111 7.21 0.00 0.00 3.91
280 281 1.519455 GGACTTCGGCGGTGAGATG 60.519 63.158 7.21 0.00 0.00 2.90
281 282 1.330655 ATGGACTTCGGCGGTGAGAT 61.331 55.000 7.21 0.00 0.00 2.75
282 283 1.945354 GATGGACTTCGGCGGTGAGA 61.945 60.000 7.21 0.00 0.00 3.27
283 284 1.519455 GATGGACTTCGGCGGTGAG 60.519 63.158 7.21 5.66 0.00 3.51
284 285 1.613317 ATGATGGACTTCGGCGGTGA 61.613 55.000 7.21 0.00 0.00 4.02
285 286 1.153369 ATGATGGACTTCGGCGGTG 60.153 57.895 7.21 2.39 0.00 4.94
286 287 1.144057 GATGATGGACTTCGGCGGT 59.856 57.895 7.21 0.00 0.00 5.68
287 288 0.877649 CTGATGATGGACTTCGGCGG 60.878 60.000 7.21 0.00 0.00 6.13
288 289 0.103026 TCTGATGATGGACTTCGGCG 59.897 55.000 0.00 0.00 0.00 6.46
289 290 2.036992 AGATCTGATGATGGACTTCGGC 59.963 50.000 0.00 0.00 32.19 5.54
290 291 3.554544 CCAGATCTGATGATGGACTTCGG 60.555 52.174 24.62 0.00 32.19 4.30
291 292 3.320256 TCCAGATCTGATGATGGACTTCG 59.680 47.826 24.62 2.45 32.19 3.79
292 293 4.588106 TCTCCAGATCTGATGATGGACTTC 59.412 45.833 24.62 0.00 32.19 3.01
293 294 4.554683 TCTCCAGATCTGATGATGGACTT 58.445 43.478 24.62 0.00 32.19 3.01
294 295 4.140971 TCTCTCCAGATCTGATGATGGACT 60.141 45.833 24.62 0.00 32.19 3.85
295 296 4.151121 TCTCTCCAGATCTGATGATGGAC 58.849 47.826 24.62 0.00 32.19 4.02
296 297 4.466255 TCTCTCCAGATCTGATGATGGA 57.534 45.455 24.62 11.37 32.19 3.41
297 298 4.773149 TCATCTCTCCAGATCTGATGATGG 59.227 45.833 24.62 7.20 37.25 3.51
298 299 5.986501 TCATCTCTCCAGATCTGATGATG 57.013 43.478 24.62 24.59 37.25 3.07
299 300 5.246656 GGTTCATCTCTCCAGATCTGATGAT 59.753 44.000 24.62 16.44 41.73 2.45
300 301 4.588106 GGTTCATCTCTCCAGATCTGATGA 59.412 45.833 24.62 19.68 37.25 2.92
301 302 4.262549 GGGTTCATCTCTCCAGATCTGATG 60.263 50.000 24.62 17.80 37.25 3.07
302 303 3.903090 GGGTTCATCTCTCCAGATCTGAT 59.097 47.826 24.62 6.16 37.25 2.90
303 304 3.052262 AGGGTTCATCTCTCCAGATCTGA 60.052 47.826 24.62 9.26 37.25 3.27
304 305 3.307506 AGGGTTCATCTCTCCAGATCTG 58.692 50.000 16.24 16.24 37.25 2.90
305 306 3.575805 GAGGGTTCATCTCTCCAGATCT 58.424 50.000 0.00 0.00 37.25 2.75
312 313 1.127343 CAGGGGAGGGTTCATCTCTC 58.873 60.000 0.00 0.00 42.62 3.20
313 314 0.719015 TCAGGGGAGGGTTCATCTCT 59.281 55.000 0.00 0.00 0.00 3.10
314 315 1.584724 TTCAGGGGAGGGTTCATCTC 58.415 55.000 0.00 0.00 0.00 2.75
315 316 2.131023 GATTCAGGGGAGGGTTCATCT 58.869 52.381 0.00 0.00 0.00 2.90
316 317 2.131023 AGATTCAGGGGAGGGTTCATC 58.869 52.381 0.00 0.00 0.00 2.92
317 318 2.293598 AGATTCAGGGGAGGGTTCAT 57.706 50.000 0.00 0.00 0.00 2.57
318 319 2.059756 AAGATTCAGGGGAGGGTTCA 57.940 50.000 0.00 0.00 0.00 3.18
319 320 2.308866 TGAAAGATTCAGGGGAGGGTTC 59.691 50.000 0.00 0.00 34.08 3.62
320 321 2.358258 TGAAAGATTCAGGGGAGGGTT 58.642 47.619 0.00 0.00 34.08 4.11
321 322 2.059756 TGAAAGATTCAGGGGAGGGT 57.940 50.000 0.00 0.00 34.08 4.34
330 331 6.479006 ACAAGGATGATCACTGAAAGATTCA 58.521 36.000 0.00 0.00 37.43 2.57
331 332 6.238049 CGACAAGGATGATCACTGAAAGATTC 60.238 42.308 0.00 0.00 37.43 2.52
332 333 5.583854 CGACAAGGATGATCACTGAAAGATT 59.416 40.000 0.00 0.00 37.43 2.40
333 334 5.114780 CGACAAGGATGATCACTGAAAGAT 58.885 41.667 0.00 0.00 37.43 2.40
334 335 4.021104 ACGACAAGGATGATCACTGAAAGA 60.021 41.667 0.00 0.00 37.43 2.52
335 336 4.092529 CACGACAAGGATGATCACTGAAAG 59.907 45.833 0.00 0.00 42.29 2.62
336 337 3.996363 CACGACAAGGATGATCACTGAAA 59.004 43.478 0.00 0.00 0.00 2.69
337 338 3.588955 CACGACAAGGATGATCACTGAA 58.411 45.455 0.00 0.00 0.00 3.02
338 339 2.094026 CCACGACAAGGATGATCACTGA 60.094 50.000 0.00 0.00 0.00 3.41
339 340 2.094026 TCCACGACAAGGATGATCACTG 60.094 50.000 0.00 0.00 0.00 3.66
340 341 2.167281 CTCCACGACAAGGATGATCACT 59.833 50.000 0.00 0.00 33.99 3.41
341 342 2.544685 CTCCACGACAAGGATGATCAC 58.455 52.381 0.00 0.00 33.99 3.06
342 343 1.134699 GCTCCACGACAAGGATGATCA 60.135 52.381 0.00 0.00 33.99 2.92
343 344 1.576356 GCTCCACGACAAGGATGATC 58.424 55.000 0.00 0.00 33.99 2.92
344 345 0.179000 GGCTCCACGACAAGGATGAT 59.821 55.000 0.00 0.00 33.99 2.45
345 346 1.191489 TGGCTCCACGACAAGGATGA 61.191 55.000 0.00 0.00 33.99 2.92
346 347 1.021390 GTGGCTCCACGACAAGGATG 61.021 60.000 2.97 0.00 37.19 3.51
347 348 1.296715 GTGGCTCCACGACAAGGAT 59.703 57.895 2.97 0.00 37.19 3.24
348 349 2.741092 GTGGCTCCACGACAAGGA 59.259 61.111 2.97 0.00 37.19 3.36
356 357 1.142748 CGATCTCCTGTGGCTCCAC 59.857 63.158 11.95 11.95 46.33 4.02
357 358 2.725312 GCGATCTCCTGTGGCTCCA 61.725 63.158 0.00 0.00 0.00 3.86
358 359 2.107953 GCGATCTCCTGTGGCTCC 59.892 66.667 0.00 0.00 0.00 4.70
359 360 1.227205 CAGCGATCTCCTGTGGCTC 60.227 63.158 0.00 0.00 0.00 4.70
360 361 2.898738 CAGCGATCTCCTGTGGCT 59.101 61.111 0.00 0.00 0.00 4.75
361 362 2.894387 GCAGCGATCTCCTGTGGC 60.894 66.667 10.68 0.00 32.93 5.01
362 363 1.521010 CTGCAGCGATCTCCTGTGG 60.521 63.158 0.00 2.82 32.93 4.17
363 364 2.172372 GCTGCAGCGATCTCCTGTG 61.172 63.158 25.23 0.00 32.93 3.66
364 365 1.969200 ATGCTGCAGCGATCTCCTGT 61.969 55.000 32.11 7.73 45.83 4.00
365 366 0.814410 AATGCTGCAGCGATCTCCTG 60.814 55.000 32.11 6.02 45.83 3.86
366 367 0.532417 GAATGCTGCAGCGATCTCCT 60.532 55.000 32.11 12.39 45.83 3.69
367 368 0.532417 AGAATGCTGCAGCGATCTCC 60.532 55.000 29.92 18.28 45.83 3.71
368 369 0.582482 CAGAATGCTGCAGCGATCTC 59.418 55.000 31.70 24.39 45.83 2.75
369 370 2.691571 CAGAATGCTGCAGCGATCT 58.308 52.632 29.92 29.92 45.83 2.75
381 382 0.395311 ATGGTGGAGGCTGCAGAATG 60.395 55.000 20.43 0.00 40.87 2.67
382 383 0.106819 GATGGTGGAGGCTGCAGAAT 60.107 55.000 20.43 5.97 0.00 2.40
383 384 1.300963 GATGGTGGAGGCTGCAGAA 59.699 57.895 20.43 0.17 0.00 3.02
384 385 2.673200 GGATGGTGGAGGCTGCAGA 61.673 63.158 20.43 0.00 0.00 4.26
385 386 2.124403 GGATGGTGGAGGCTGCAG 60.124 66.667 9.68 10.11 0.00 4.41
386 387 4.100084 CGGATGGTGGAGGCTGCA 62.100 66.667 3.93 3.93 0.00 4.41
387 388 4.864334 CCGGATGGTGGAGGCTGC 62.864 72.222 0.00 0.00 0.00 5.25
388 389 4.181010 CCCGGATGGTGGAGGCTG 62.181 72.222 0.73 0.00 0.00 4.85
394 395 4.626081 GATCGGCCCGGATGGTGG 62.626 72.222 0.73 0.00 36.04 4.61
395 396 3.814615 CTGATCGGCCCGGATGGTG 62.815 68.421 0.73 0.00 36.04 4.17
396 397 3.550431 CTGATCGGCCCGGATGGT 61.550 66.667 0.73 0.00 36.04 3.55
397 398 2.513026 GATCTGATCGGCCCGGATGG 62.513 65.000 0.73 0.00 30.31 3.51
398 399 1.079543 GATCTGATCGGCCCGGATG 60.080 63.158 0.73 0.00 30.31 3.51
399 400 1.229019 AGATCTGATCGGCCCGGAT 60.229 57.895 0.73 0.00 32.67 4.18
400 401 2.198703 AGATCTGATCGGCCCGGA 59.801 61.111 0.73 0.00 0.00 5.14
401 402 2.341543 CAGATCTGATCGGCCCGG 59.658 66.667 18.34 0.00 0.00 5.73
402 403 1.539560 ATCCAGATCTGATCGGCCCG 61.540 60.000 24.62 0.00 0.00 6.13
403 404 0.036577 CATCCAGATCTGATCGGCCC 60.037 60.000 24.62 0.00 0.00 5.80
404 405 0.972134 TCATCCAGATCTGATCGGCC 59.028 55.000 24.62 0.00 0.00 6.13
405 406 1.342496 TGTCATCCAGATCTGATCGGC 59.658 52.381 24.62 12.80 0.00 5.54
406 407 3.847542 GATGTCATCCAGATCTGATCGG 58.152 50.000 24.62 17.06 0.00 4.18
419 420 2.469274 ATGGCTCGATGGATGTCATC 57.531 50.000 4.06 4.06 46.63 2.92
420 421 2.105306 TGAATGGCTCGATGGATGTCAT 59.895 45.455 0.00 0.00 39.13 3.06
421 422 1.485895 TGAATGGCTCGATGGATGTCA 59.514 47.619 0.00 0.00 0.00 3.58
422 423 2.141517 CTGAATGGCTCGATGGATGTC 58.858 52.381 0.00 0.00 0.00 3.06
423 424 1.764723 TCTGAATGGCTCGATGGATGT 59.235 47.619 0.00 0.00 0.00 3.06
424 425 2.141517 GTCTGAATGGCTCGATGGATG 58.858 52.381 0.00 0.00 0.00 3.51
425 426 1.764723 TGTCTGAATGGCTCGATGGAT 59.235 47.619 0.00 0.00 0.00 3.41
426 427 1.194218 TGTCTGAATGGCTCGATGGA 58.806 50.000 0.00 0.00 0.00 3.41
427 428 1.871676 CATGTCTGAATGGCTCGATGG 59.128 52.381 0.00 0.00 0.00 3.51
428 429 2.830104 TCATGTCTGAATGGCTCGATG 58.170 47.619 0.00 0.00 0.00 3.84
429 430 3.548745 TTCATGTCTGAATGGCTCGAT 57.451 42.857 0.00 0.00 36.46 3.59
438 439 4.022935 GTGGTTTGCTGATTCATGTCTGAA 60.023 41.667 0.00 0.00 45.15 3.02
439 440 3.503363 GTGGTTTGCTGATTCATGTCTGA 59.497 43.478 0.00 0.00 0.00 3.27
440 441 3.668757 CGTGGTTTGCTGATTCATGTCTG 60.669 47.826 0.00 0.00 0.00 3.51
441 442 2.485426 CGTGGTTTGCTGATTCATGTCT 59.515 45.455 0.00 0.00 0.00 3.41
442 443 2.855180 CGTGGTTTGCTGATTCATGTC 58.145 47.619 0.00 0.00 0.00 3.06
443 444 1.068333 GCGTGGTTTGCTGATTCATGT 60.068 47.619 0.00 0.00 0.00 3.21
444 445 1.200716 AGCGTGGTTTGCTGATTCATG 59.799 47.619 0.00 0.00 42.14 3.07
445 446 1.470098 GAGCGTGGTTTGCTGATTCAT 59.530 47.619 0.00 0.00 44.18 2.57
446 447 0.874390 GAGCGTGGTTTGCTGATTCA 59.126 50.000 0.00 0.00 44.18 2.57
447 448 0.179215 CGAGCGTGGTTTGCTGATTC 60.179 55.000 0.00 0.00 44.18 2.52
448 449 1.577328 CCGAGCGTGGTTTGCTGATT 61.577 55.000 0.00 0.00 44.18 2.57
449 450 2.034879 CCGAGCGTGGTTTGCTGAT 61.035 57.895 0.00 0.00 44.18 2.90
450 451 2.664851 CCGAGCGTGGTTTGCTGA 60.665 61.111 0.00 0.00 44.18 4.26
451 452 3.726517 CCCGAGCGTGGTTTGCTG 61.727 66.667 0.00 0.00 44.18 4.41
453 454 3.723348 GACCCGAGCGTGGTTTGC 61.723 66.667 4.90 0.00 35.85 3.68
454 455 3.411351 CGACCCGAGCGTGGTTTG 61.411 66.667 4.90 0.00 35.85 2.93
455 456 2.830704 GATCGACCCGAGCGTGGTTT 62.831 60.000 0.00 0.00 39.91 3.27
456 457 3.352338 GATCGACCCGAGCGTGGTT 62.352 63.158 0.00 0.00 39.91 3.67
457 458 3.823330 GATCGACCCGAGCGTGGT 61.823 66.667 0.00 3.30 39.91 4.16
462 463 1.279238 GTCTACGATCGACCCGAGC 59.721 63.158 24.34 1.24 39.91 5.03
463 464 0.873312 TCGTCTACGATCGACCCGAG 60.873 60.000 24.34 10.32 44.22 4.63
464 465 1.141665 TCGTCTACGATCGACCCGA 59.858 57.895 24.34 18.90 44.22 5.14
465 466 3.710044 TCGTCTACGATCGACCCG 58.290 61.111 24.34 16.97 44.22 5.28
475 476 0.933097 TCAGTATCGGCGTCGTCTAC 59.067 55.000 10.18 12.72 37.69 2.59
476 477 1.655484 TTCAGTATCGGCGTCGTCTA 58.345 50.000 10.18 0.00 37.69 2.59
477 478 1.022735 ATTCAGTATCGGCGTCGTCT 58.977 50.000 10.18 3.89 37.69 4.18
478 479 2.032204 AGTATTCAGTATCGGCGTCGTC 60.032 50.000 10.18 1.27 37.69 4.20
479 480 1.945394 AGTATTCAGTATCGGCGTCGT 59.055 47.619 10.18 0.00 37.69 4.34
480 481 2.572243 GAGTATTCAGTATCGGCGTCG 58.428 52.381 1.15 1.15 37.82 5.12
481 482 2.292569 TGGAGTATTCAGTATCGGCGTC 59.707 50.000 6.85 0.00 0.00 5.19
482 483 2.293677 CTGGAGTATTCAGTATCGGCGT 59.706 50.000 6.85 0.00 36.78 5.68
483 484 2.922758 GCTGGAGTATTCAGTATCGGCG 60.923 54.545 0.00 0.00 46.12 6.46
484 485 2.610727 GGCTGGAGTATTCAGTATCGGC 60.611 54.545 0.00 0.00 46.12 5.54
485 486 2.628178 TGGCTGGAGTATTCAGTATCGG 59.372 50.000 0.00 0.00 46.12 4.18
486 487 3.305676 CCTGGCTGGAGTATTCAGTATCG 60.306 52.174 4.05 0.00 46.12 2.92
487 488 3.643792 ACCTGGCTGGAGTATTCAGTATC 59.356 47.826 18.12 0.00 46.12 2.24
488 489 3.658725 ACCTGGCTGGAGTATTCAGTAT 58.341 45.455 18.12 0.00 46.12 2.12
489 490 3.116096 ACCTGGCTGGAGTATTCAGTA 57.884 47.619 18.12 0.00 46.12 2.74
490 491 1.958288 ACCTGGCTGGAGTATTCAGT 58.042 50.000 18.12 0.00 46.12 3.41
492 493 3.031736 GAGTACCTGGCTGGAGTATTCA 58.968 50.000 18.12 0.00 39.71 2.57
493 494 3.301274 AGAGTACCTGGCTGGAGTATTC 58.699 50.000 18.12 6.46 39.71 1.75
494 495 3.052490 AGAGAGTACCTGGCTGGAGTATT 60.052 47.826 18.12 0.00 39.71 1.89
495 496 2.516277 AGAGAGTACCTGGCTGGAGTAT 59.484 50.000 18.12 1.36 39.71 2.12
496 497 1.923850 AGAGAGTACCTGGCTGGAGTA 59.076 52.381 18.12 0.00 39.71 2.59
497 498 0.707616 AGAGAGTACCTGGCTGGAGT 59.292 55.000 18.12 3.84 39.71 3.85
498 499 1.398692 GAGAGAGTACCTGGCTGGAG 58.601 60.000 18.12 0.00 39.71 3.86
499 500 0.033011 GGAGAGAGTACCTGGCTGGA 60.033 60.000 18.12 0.00 39.71 3.86
500 501 1.388065 CGGAGAGAGTACCTGGCTGG 61.388 65.000 9.11 9.11 42.93 4.85
501 502 0.681564 ACGGAGAGAGTACCTGGCTG 60.682 60.000 0.00 0.00 0.00 4.85
502 503 0.394625 GACGGAGAGAGTACCTGGCT 60.395 60.000 0.00 0.00 0.00 4.75
503 504 1.385756 GGACGGAGAGAGTACCTGGC 61.386 65.000 0.00 0.00 0.00 4.85
504 505 1.096386 CGGACGGAGAGAGTACCTGG 61.096 65.000 0.00 0.00 0.00 4.45
505 506 0.107800 TCGGACGGAGAGAGTACCTG 60.108 60.000 0.00 0.00 0.00 4.00
506 507 0.617413 TTCGGACGGAGAGAGTACCT 59.383 55.000 0.00 0.00 0.00 3.08
517 518 4.925054 TCTACAACAAGTAATTTCGGACGG 59.075 41.667 0.00 0.00 30.92 4.79
530 531 5.945784 TCCCTCCATCAATTTCTACAACAAG 59.054 40.000 0.00 0.00 0.00 3.16
535 536 5.964477 AGTACTCCCTCCATCAATTTCTACA 59.036 40.000 0.00 0.00 0.00 2.74
537 538 7.338710 CAAAGTACTCCCTCCATCAATTTCTA 58.661 38.462 0.00 0.00 0.00 2.10
543 544 2.642311 TGCAAAGTACTCCCTCCATCAA 59.358 45.455 0.00 0.00 0.00 2.57
544 545 2.265367 TGCAAAGTACTCCCTCCATCA 58.735 47.619 0.00 0.00 0.00 3.07
547 548 1.559682 GGATGCAAAGTACTCCCTCCA 59.440 52.381 0.00 0.00 0.00 3.86
548 549 1.473434 CGGATGCAAAGTACTCCCTCC 60.473 57.143 0.00 0.00 0.00 4.30
607 615 5.516090 TGACCTAATTGTTCGTTCAAAAGC 58.484 37.500 0.00 0.00 0.00 3.51
702 724 1.081840 GCAGAAAGGTTCAGTGCGC 60.082 57.895 0.00 0.00 0.00 6.09
741 763 0.906775 GACCACTTCCCCGAATACCA 59.093 55.000 0.00 0.00 0.00 3.25
758 780 1.659098 CCAAATAACGTCTGCGAGGAC 59.341 52.381 0.00 0.00 42.00 3.85
759 781 2.004583 CCAAATAACGTCTGCGAGGA 57.995 50.000 0.00 0.00 42.00 3.71
760 782 0.373716 GCCAAATAACGTCTGCGAGG 59.626 55.000 0.00 0.00 42.00 4.63
768 790 1.680105 CGCTCGACGCCAAATAACGT 61.680 55.000 0.00 0.00 46.91 3.99
769 791 1.013755 CGCTCGACGCCAAATAACG 60.014 57.895 0.00 0.00 34.21 3.18
770 792 0.717224 TTCGCTCGACGCCAAATAAC 59.283 50.000 0.00 0.00 43.23 1.89
771 793 0.996462 CTTCGCTCGACGCCAAATAA 59.004 50.000 0.00 0.00 43.23 1.40
772 794 0.108992 ACTTCGCTCGACGCCAAATA 60.109 50.000 0.00 0.00 43.23 1.40
773 795 1.374252 ACTTCGCTCGACGCCAAAT 60.374 52.632 0.00 0.00 43.23 2.32
774 796 2.028484 ACTTCGCTCGACGCCAAA 59.972 55.556 0.00 0.00 43.23 3.28
775 797 2.733218 CACTTCGCTCGACGCCAA 60.733 61.111 0.00 0.00 43.23 4.52
776 798 4.717629 CCACTTCGCTCGACGCCA 62.718 66.667 0.00 0.00 43.23 5.69
856 886 3.470567 GTCTGCGACCGTTCTGCG 61.471 66.667 0.00 0.00 40.95 5.18
886 916 7.760607 ACTCTATATGTAGGTGAATCCAGAGA 58.239 38.462 0.00 0.00 39.02 3.10
887 917 8.415950 AACTCTATATGTAGGTGAATCCAGAG 57.584 38.462 0.00 0.00 39.02 3.35
888 918 9.298250 GTAACTCTATATGTAGGTGAATCCAGA 57.702 37.037 0.00 0.00 39.02 3.86
889 919 8.237949 CGTAACTCTATATGTAGGTGAATCCAG 58.762 40.741 0.00 0.00 39.02 3.86
915 945 1.135333 GTTCATGGTCTCCGACTCTCC 59.865 57.143 0.00 0.00 32.47 3.71
916 946 1.135333 GGTTCATGGTCTCCGACTCTC 59.865 57.143 0.00 0.00 32.47 3.20
917 947 1.187087 GGTTCATGGTCTCCGACTCT 58.813 55.000 0.00 0.00 32.47 3.24
918 948 1.187087 AGGTTCATGGTCTCCGACTC 58.813 55.000 0.00 0.00 32.47 3.36
919 949 1.550976 GAAGGTTCATGGTCTCCGACT 59.449 52.381 0.00 0.00 32.47 4.18
920 950 1.736032 CGAAGGTTCATGGTCTCCGAC 60.736 57.143 0.00 0.00 0.00 4.79
921 951 0.530744 CGAAGGTTCATGGTCTCCGA 59.469 55.000 0.00 0.00 0.00 4.55
922 952 0.246635 ACGAAGGTTCATGGTCTCCG 59.753 55.000 0.00 0.00 0.00 4.63
923 953 1.405661 GGACGAAGGTTCATGGTCTCC 60.406 57.143 0.00 0.00 0.00 3.71
947 977 1.456296 TAGCCGAACGTGAAGAGCTA 58.544 50.000 0.00 0.00 0.00 3.32
984 1014 1.869774 CCATCATGATTTCTCGGCGA 58.130 50.000 10.14 10.14 0.00 5.54
1632 1683 3.689649 GGTTGTTATAGAACTGCACCCAG 59.310 47.826 1.39 0.00 44.80 4.45
1851 1924 1.485124 ACCTCGACCACAGCATGATA 58.515 50.000 0.00 0.00 39.69 2.15
1887 1960 0.830444 TGACCTTGTCGCTGTACCCT 60.830 55.000 0.00 0.00 34.95 4.34
1937 2011 0.032017 ATCCCTGACCCGAGCTTAGT 60.032 55.000 0.00 0.00 0.00 2.24
1965 2039 5.130975 TGATAGAGGACATGTTAATGGCACT 59.869 40.000 0.00 0.00 44.48 4.40
2189 2265 2.029307 GACCAGGTCTATCCGCCCAC 62.029 65.000 12.94 0.00 41.99 4.61
2202 2278 0.744414 CACAATGTAGCCGGACCAGG 60.744 60.000 5.05 0.00 0.00 4.45
2204 2280 1.298340 CCACAATGTAGCCGGACCA 59.702 57.895 5.05 0.00 0.00 4.02
2239 2315 3.764049 GGCAACGACACGACTCGC 61.764 66.667 0.00 0.00 37.15 5.03
2404 2483 2.432206 TGACGTCCATGTGTACTGTG 57.568 50.000 14.12 0.00 0.00 3.66
2418 2497 3.309682 CCAGAATAATTGCGACATGACGT 59.690 43.478 18.25 0.00 35.59 4.34
2493 2572 4.943705 AGCAACATAGAACCGACATCAATT 59.056 37.500 0.00 0.00 0.00 2.32
2521 2600 8.699749 GCAAACCAATAAGAAAAGTCATTACAC 58.300 33.333 0.00 0.00 0.00 2.90
2524 2603 7.598493 GCAGCAAACCAATAAGAAAAGTCATTA 59.402 33.333 0.00 0.00 0.00 1.90
2529 2608 4.037446 TCGCAGCAAACCAATAAGAAAAGT 59.963 37.500 0.00 0.00 0.00 2.66
2679 2758 5.012148 GCCCAGTCTATCCATACTACAACAT 59.988 44.000 0.00 0.00 0.00 2.71
2685 2764 3.520691 ACGCCCAGTCTATCCATACTA 57.479 47.619 0.00 0.00 0.00 1.82
2784 2863 6.280643 TCGTGTGAAGGAATTATACCATGAG 58.719 40.000 0.00 0.00 0.00 2.90
2785 2864 6.228616 TCGTGTGAAGGAATTATACCATGA 57.771 37.500 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.