Multiple sequence alignment - TraesCS3D01G357900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G357900 chr3D 100.000 3096 0 0 1 3096 471077002 471080097 0.000000e+00 5718
1 TraesCS3D01G357900 chr3D 89.228 622 57 4 2477 3088 396429587 396428966 0.000000e+00 769
2 TraesCS3D01G357900 chr3D 95.455 88 4 0 2390 2477 23551089 23551176 1.160000e-29 141
3 TraesCS3D01G357900 chr3A 90.491 978 54 17 682 1648 613197653 613198602 0.000000e+00 1254
4 TraesCS3D01G357900 chr3A 89.355 620 56 6 2479 3088 729343319 729342700 0.000000e+00 771
5 TraesCS3D01G357900 chr3A 89.150 341 19 10 1859 2194 613214405 613214732 2.870000e-110 409
6 TraesCS3D01G357900 chr3A 90.686 204 17 2 1643 1845 613214218 613214420 1.410000e-68 270
7 TraesCS3D01G357900 chr3B 86.409 1192 70 30 704 1845 625420797 625421946 0.000000e+00 1219
8 TraesCS3D01G357900 chr3B 89.984 629 52 7 2478 3096 625596942 625597569 0.000000e+00 802
9 TraesCS3D01G357900 chr3B 83.707 669 61 28 1 633 625419313 625419969 3.440000e-164 588
10 TraesCS3D01G357900 chr3B 92.375 341 13 8 1858 2194 625421930 625422261 1.000000e-129 473
11 TraesCS3D01G357900 chr3B 91.724 145 9 3 2228 2370 729802609 729802466 6.770000e-47 198
12 TraesCS3D01G357900 chr4D 89.550 622 52 9 2477 3088 446434422 446435040 0.000000e+00 776
13 TraesCS3D01G357900 chr4D 96.552 87 3 0 2391 2477 498569499 498569413 8.950000e-31 145
14 TraesCS3D01G357900 chr2D 89.499 619 55 6 2480 3088 542158020 542157402 0.000000e+00 774
15 TraesCS3D01G357900 chr2D 96.552 87 3 0 2391 2477 366178799 366178885 8.950000e-31 145
16 TraesCS3D01G357900 chr5D 88.907 622 59 4 2477 3088 407508492 407509113 0.000000e+00 758
17 TraesCS3D01G357900 chr5D 96.591 88 3 0 2391 2478 565657112 565657199 2.490000e-31 147
18 TraesCS3D01G357900 chr5B 88.548 620 61 6 2479 3088 302235356 302235975 0.000000e+00 743
19 TraesCS3D01G357900 chr5B 87.050 139 16 2 2223 2360 684877661 684877524 4.130000e-34 156
20 TraesCS3D01G357900 chr1B 88.567 621 60 7 2477 3087 429968732 429969351 0.000000e+00 743
21 TraesCS3D01G357900 chr2A 88.424 622 62 6 2477 3088 369817369 369817990 0.000000e+00 741
22 TraesCS3D01G357900 chr2A 96.591 88 3 0 2390 2477 27737863 27737776 2.490000e-31 147
23 TraesCS3D01G357900 chr6D 97.647 85 2 0 2393 2477 460279775 460279691 2.490000e-31 147
24 TraesCS3D01G357900 chr5A 96.552 87 3 0 2391 2477 41301549 41301463 8.950000e-31 145
25 TraesCS3D01G357900 chr1A 95.455 88 4 0 2390 2477 1673217 1673304 1.160000e-29 141
26 TraesCS3D01G357900 chr1D 90.476 105 7 2 2374 2477 465581991 465581889 5.390000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G357900 chr3D 471077002 471080097 3095 False 5718.0 5718 100.000 1 3096 1 chr3D.!!$F2 3095
1 TraesCS3D01G357900 chr3D 396428966 396429587 621 True 769.0 769 89.228 2477 3088 1 chr3D.!!$R1 611
2 TraesCS3D01G357900 chr3A 613197653 613198602 949 False 1254.0 1254 90.491 682 1648 1 chr3A.!!$F1 966
3 TraesCS3D01G357900 chr3A 729342700 729343319 619 True 771.0 771 89.355 2479 3088 1 chr3A.!!$R1 609
4 TraesCS3D01G357900 chr3A 613214218 613214732 514 False 339.5 409 89.918 1643 2194 2 chr3A.!!$F2 551
5 TraesCS3D01G357900 chr3B 625596942 625597569 627 False 802.0 802 89.984 2478 3096 1 chr3B.!!$F1 618
6 TraesCS3D01G357900 chr3B 625419313 625422261 2948 False 760.0 1219 87.497 1 2194 3 chr3B.!!$F2 2193
7 TraesCS3D01G357900 chr4D 446434422 446435040 618 False 776.0 776 89.550 2477 3088 1 chr4D.!!$F1 611
8 TraesCS3D01G357900 chr2D 542157402 542158020 618 True 774.0 774 89.499 2480 3088 1 chr2D.!!$R1 608
9 TraesCS3D01G357900 chr5D 407508492 407509113 621 False 758.0 758 88.907 2477 3088 1 chr5D.!!$F1 611
10 TraesCS3D01G357900 chr5B 302235356 302235975 619 False 743.0 743 88.548 2479 3088 1 chr5B.!!$F1 609
11 TraesCS3D01G357900 chr1B 429968732 429969351 619 False 743.0 743 88.567 2477 3087 1 chr1B.!!$F1 610
12 TraesCS3D01G357900 chr2A 369817369 369817990 621 False 741.0 741 88.424 2477 3088 1 chr2A.!!$F1 611

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
786 1615 0.037447 AAAGTCCTCTTCAGCCCAGC 59.963 55.0 0.0 0.0 32.9 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2350 3258 0.0293 CATGCGTTCCATTAAGGCCG 59.971 55.0 0.0 0.0 46.16 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 30 6.449448 AAAAAGCGTAAACACGTTGAAAAA 57.551 29.167 0.00 0.00 35.26 1.94
29 31 5.424518 AAAGCGTAAACACGTTGAAAAAC 57.575 34.783 0.00 0.00 35.26 2.43
30 32 4.080969 AGCGTAAACACGTTGAAAAACA 57.919 36.364 0.00 0.00 35.26 2.83
31 33 4.664188 AGCGTAAACACGTTGAAAAACAT 58.336 34.783 0.00 0.00 35.26 2.71
32 34 4.497608 AGCGTAAACACGTTGAAAAACATG 59.502 37.500 0.00 0.00 35.26 3.21
33 35 4.496183 GCGTAAACACGTTGAAAAACATGA 59.504 37.500 0.00 0.00 35.26 3.07
34 36 5.172411 GCGTAAACACGTTGAAAAACATGAT 59.828 36.000 0.00 0.00 35.26 2.45
35 37 6.610641 GCGTAAACACGTTGAAAAACATGATC 60.611 38.462 0.00 0.00 35.26 2.92
36 38 6.412362 CGTAAACACGTTGAAAAACATGATCA 59.588 34.615 0.00 0.00 0.00 2.92
37 39 7.112844 CGTAAACACGTTGAAAAACATGATCAT 59.887 33.333 1.18 1.18 0.00 2.45
39 41 6.317789 ACACGTTGAAAAACATGATCATCT 57.682 33.333 4.86 0.00 0.00 2.90
40 42 6.738114 ACACGTTGAAAAACATGATCATCTT 58.262 32.000 4.86 0.00 0.00 2.40
41 43 7.202526 ACACGTTGAAAAACATGATCATCTTT 58.797 30.769 4.86 3.99 0.00 2.52
42 44 7.706179 ACACGTTGAAAAACATGATCATCTTTT 59.294 29.630 18.54 18.54 0.00 2.27
163 165 8.908786 TTTTGCATATTTTAAAATGTGTCCCA 57.091 26.923 27.88 19.10 39.03 4.37
277 281 9.387123 GAAAGATGTTCTAACACTTGACAAATC 57.613 33.333 0.00 0.00 42.51 2.17
290 294 6.034898 CACTTGACAAATCTTTGCTCGTTTTT 59.965 34.615 2.63 0.00 41.79 1.94
296 300 9.194716 GACAAATCTTTGCTCGTTTTTAAAAAC 57.805 29.630 26.83 26.83 41.68 2.43
314 318 6.660887 AAAAACGTTGCTGACATTTTTGAT 57.339 29.167 0.00 0.00 32.67 2.57
318 322 6.072112 ACGTTGCTGACATTTTTGATAAGT 57.928 33.333 0.00 0.00 0.00 2.24
364 368 7.856145 TGTTTGCCATGTTCTTAAAAATGTT 57.144 28.000 0.00 0.00 29.29 2.71
367 371 8.394121 GTTTGCCATGTTCTTAAAAATGTTTGA 58.606 29.630 0.00 0.00 29.29 2.69
368 372 8.498054 TTGCCATGTTCTTAAAAATGTTTGAA 57.502 26.923 0.00 0.00 29.29 2.69
453 484 6.031549 TGTATATGAGAAATGTTCAACGCG 57.968 37.500 3.53 3.53 0.00 6.01
457 488 7.940178 ATATGAGAAATGTTCAACGCGTATA 57.060 32.000 14.46 0.00 0.00 1.47
460 491 5.808030 TGAGAAATGTTCAACGCGTATATGA 59.192 36.000 14.46 10.64 0.00 2.15
528 561 3.322541 TGAACACCGATAGAGGAAACACA 59.677 43.478 0.00 0.00 39.76 3.72
543 576 8.190784 AGAGGAAACACACAAGAAACAAATAAG 58.809 33.333 0.00 0.00 0.00 1.73
544 577 6.756542 AGGAAACACACAAGAAACAAATAAGC 59.243 34.615 0.00 0.00 0.00 3.09
604 638 7.083062 TCGTACCTATCCATAGAACCTTCTA 57.917 40.000 0.00 0.00 43.35 2.10
633 669 5.435291 TCCCAAGAAACTAAACCACGTAAA 58.565 37.500 0.00 0.00 0.00 2.01
634 670 5.296531 TCCCAAGAAACTAAACCACGTAAAC 59.703 40.000 0.00 0.00 0.00 2.01
635 671 5.199726 CCAAGAAACTAAACCACGTAAACG 58.800 41.667 0.04 0.04 46.33 3.60
636 672 4.457433 AGAAACTAAACCACGTAAACGC 57.543 40.909 1.74 0.00 44.43 4.84
637 673 2.928295 AACTAAACCACGTAAACGCG 57.072 45.000 3.53 3.53 44.43 6.01
638 674 0.508213 ACTAAACCACGTAAACGCGC 59.492 50.000 5.73 0.00 44.43 6.86
648 1462 1.789490 GTAAACGCGCGTTATTGGAC 58.211 50.000 43.84 30.32 37.35 4.02
649 1463 0.720590 TAAACGCGCGTTATTGGACC 59.279 50.000 43.84 0.00 37.35 4.46
665 1479 0.741221 GACCGGCCAACTAGCAGAAG 60.741 60.000 0.00 0.00 0.00 2.85
677 1491 2.659016 CAGAAGCGCCAGAGGTGA 59.341 61.111 2.29 0.00 34.74 4.02
678 1492 1.447489 CAGAAGCGCCAGAGGTGAG 60.447 63.158 2.29 0.00 34.74 3.51
680 1494 1.188219 AGAAGCGCCAGAGGTGAGAA 61.188 55.000 2.29 0.00 34.74 2.87
691 1505 4.518970 CCAGAGGTGAGAAGAGTATAGCTC 59.481 50.000 0.00 0.00 44.45 4.09
778 1607 2.810852 CTGAGTGGCAAAAGTCCTCTTC 59.189 50.000 0.00 0.00 32.90 2.87
779 1608 2.172505 TGAGTGGCAAAAGTCCTCTTCA 59.827 45.455 0.00 0.00 32.90 3.02
780 1609 2.810852 GAGTGGCAAAAGTCCTCTTCAG 59.189 50.000 0.00 0.00 32.90 3.02
781 1610 1.268079 GTGGCAAAAGTCCTCTTCAGC 59.732 52.381 0.00 0.00 34.70 4.26
782 1611 0.884514 GGCAAAAGTCCTCTTCAGCC 59.115 55.000 0.00 0.00 42.10 4.85
783 1612 0.884514 GCAAAAGTCCTCTTCAGCCC 59.115 55.000 0.00 0.00 32.90 5.19
784 1613 1.819305 GCAAAAGTCCTCTTCAGCCCA 60.819 52.381 0.00 0.00 32.90 5.36
785 1614 2.157738 CAAAAGTCCTCTTCAGCCCAG 58.842 52.381 0.00 0.00 32.90 4.45
786 1615 0.037447 AAAGTCCTCTTCAGCCCAGC 59.963 55.000 0.00 0.00 32.90 4.85
787 1616 1.130054 AAGTCCTCTTCAGCCCAGCA 61.130 55.000 0.00 0.00 0.00 4.41
788 1617 1.130054 AGTCCTCTTCAGCCCAGCAA 61.130 55.000 0.00 0.00 0.00 3.91
789 1618 0.957888 GTCCTCTTCAGCCCAGCAAC 60.958 60.000 0.00 0.00 0.00 4.17
790 1619 1.073722 CCTCTTCAGCCCAGCAACA 59.926 57.895 0.00 0.00 0.00 3.33
791 1620 0.959372 CCTCTTCAGCCCAGCAACAG 60.959 60.000 0.00 0.00 0.00 3.16
798 1627 1.001641 GCCCAGCAACAGTGATCCT 60.002 57.895 0.00 0.00 0.00 3.24
800 1629 1.310933 CCCAGCAACAGTGATCCTGC 61.311 60.000 0.00 0.00 45.68 4.85
811 1640 2.368221 AGTGATCCTGCTAATCTGCTCC 59.632 50.000 0.00 0.00 0.00 4.70
812 1641 2.368221 GTGATCCTGCTAATCTGCTCCT 59.632 50.000 0.00 0.00 0.00 3.69
823 1652 2.897271 TCTGCTCCTCTGTCTCTTCT 57.103 50.000 0.00 0.00 0.00 2.85
840 1680 6.981559 GTCTCTTCTAATCACATAGTTCCACC 59.018 42.308 0.00 0.00 0.00 4.61
841 1681 6.667848 TCTCTTCTAATCACATAGTTCCACCA 59.332 38.462 0.00 0.00 0.00 4.17
842 1682 6.878317 TCTTCTAATCACATAGTTCCACCAG 58.122 40.000 0.00 0.00 0.00 4.00
843 1683 6.667848 TCTTCTAATCACATAGTTCCACCAGA 59.332 38.462 0.00 0.00 0.00 3.86
844 1684 6.222038 TCTAATCACATAGTTCCACCAGAC 57.778 41.667 0.00 0.00 0.00 3.51
845 1685 5.958380 TCTAATCACATAGTTCCACCAGACT 59.042 40.000 0.00 0.00 0.00 3.24
846 1686 7.123383 TCTAATCACATAGTTCCACCAGACTA 58.877 38.462 0.00 0.00 33.30 2.59
847 1687 5.599999 ATCACATAGTTCCACCAGACTAC 57.400 43.478 0.00 0.00 31.70 2.73
848 1688 4.673968 TCACATAGTTCCACCAGACTACT 58.326 43.478 0.00 0.00 31.70 2.57
849 1689 5.823312 TCACATAGTTCCACCAGACTACTA 58.177 41.667 0.00 0.00 31.70 1.82
850 1690 5.651139 TCACATAGTTCCACCAGACTACTAC 59.349 44.000 0.00 0.00 31.70 2.73
857 1697 1.540267 CACCAGACTACTACTGTGCGT 59.460 52.381 0.00 0.00 34.04 5.24
893 1733 1.148157 CTTGCATAGACGCGACAGGG 61.148 60.000 15.93 0.47 33.35 4.45
894 1734 1.884075 TTGCATAGACGCGACAGGGT 61.884 55.000 15.93 0.00 46.76 4.34
895 1735 1.153628 GCATAGACGCGACAGGGTT 60.154 57.895 15.93 0.00 43.97 4.11
896 1736 1.146358 GCATAGACGCGACAGGGTTC 61.146 60.000 15.93 0.00 43.97 3.62
911 1752 0.108756 GGTTCGACTAGCTCACACCC 60.109 60.000 0.00 0.00 0.00 4.61
963 1810 4.592192 AGGCGCCGATCGTGATGG 62.592 66.667 23.20 0.00 41.07 3.51
983 1830 1.474077 GCGCCCTTTCAATCAATCAGT 59.526 47.619 0.00 0.00 0.00 3.41
988 1835 4.338879 CCCTTTCAATCAATCAGTCCACT 58.661 43.478 0.00 0.00 0.00 4.00
989 1836 4.157289 CCCTTTCAATCAATCAGTCCACTG 59.843 45.833 0.00 0.00 45.08 3.66
1027 1874 3.681594 CGCCACCATGGTAGAGTATTTGT 60.682 47.826 19.28 0.00 40.46 2.83
1102 1975 6.790350 CACAATATCATATTTTCGTACCGTGC 59.210 38.462 0.00 0.00 0.00 5.34
1134 2007 0.906756 CAGCTCCCCTGTTCCTCTCA 60.907 60.000 0.00 0.00 36.79 3.27
1135 2008 0.907230 AGCTCCCCTGTTCCTCTCAC 60.907 60.000 0.00 0.00 0.00 3.51
1136 2009 0.907230 GCTCCCCTGTTCCTCTCACT 60.907 60.000 0.00 0.00 0.00 3.41
1137 2010 1.190643 CTCCCCTGTTCCTCTCACTC 58.809 60.000 0.00 0.00 0.00 3.51
1138 2011 0.787084 TCCCCTGTTCCTCTCACTCT 59.213 55.000 0.00 0.00 0.00 3.24
1139 2012 1.190643 CCCCTGTTCCTCTCACTCTC 58.809 60.000 0.00 0.00 0.00 3.20
1140 2013 1.272985 CCCCTGTTCCTCTCACTCTCT 60.273 57.143 0.00 0.00 0.00 3.10
1141 2014 2.099405 CCCTGTTCCTCTCACTCTCTC 58.901 57.143 0.00 0.00 0.00 3.20
1142 2015 2.291540 CCCTGTTCCTCTCACTCTCTCT 60.292 54.545 0.00 0.00 0.00 3.10
1143 2016 3.016736 CCTGTTCCTCTCACTCTCTCTC 58.983 54.545 0.00 0.00 0.00 3.20
1386 2271 9.842775 TCTACGTCTGATCTTACCTTATCTTAA 57.157 33.333 0.00 0.00 0.00 1.85
1410 2303 2.954989 TGTGTGCTTCATGGTGCTTTTA 59.045 40.909 11.06 0.00 0.00 1.52
1435 2328 8.940768 ATTCTCTCTCTGCTTTTCTTATGTAC 57.059 34.615 0.00 0.00 0.00 2.90
1436 2329 6.556212 TCTCTCTCTGCTTTTCTTATGTACG 58.444 40.000 0.00 0.00 0.00 3.67
1437 2330 6.151312 TCTCTCTCTGCTTTTCTTATGTACGT 59.849 38.462 0.00 0.00 0.00 3.57
1568 2462 7.484035 AGAGCTATGAAACGGTGATTATTTC 57.516 36.000 0.00 0.00 33.75 2.17
1586 2480 0.248289 TCTCGGACGGATGGTTTTCC 59.752 55.000 0.00 0.00 41.14 3.13
1594 2488 1.320344 GGATGGTTTTCCTTCGGCCC 61.320 60.000 0.00 0.00 42.80 5.80
1621 2515 5.207110 AGATGAATTCTCATGGAGTACCG 57.793 43.478 7.05 0.00 42.60 4.02
1627 2521 2.022195 TCTCATGGAGTACCGCTGTAC 58.978 52.381 10.18 10.18 46.36 2.90
1659 2554 5.345202 CAGATGTCTATTACGGATTTACGGC 59.655 44.000 0.00 0.00 38.39 5.68
1702 2599 6.038492 TCCTTTTAACTTTTCAACCGATCGTT 59.962 34.615 15.09 5.76 33.90 3.85
1719 2616 3.581755 TCGTTTGTGTATTCGAGGGAAG 58.418 45.455 0.00 0.00 35.19 3.46
1720 2617 3.006110 TCGTTTGTGTATTCGAGGGAAGT 59.994 43.478 0.00 0.00 35.19 3.01
1722 2619 4.212636 CGTTTGTGTATTCGAGGGAAGTTT 59.787 41.667 0.00 0.00 35.19 2.66
1727 2624 1.545841 ATTCGAGGGAAGTTTTGGGC 58.454 50.000 0.00 0.00 35.19 5.36
1754 2659 1.067669 TCACTGTGTCAGACTGTCAGC 59.932 52.381 10.88 0.26 34.69 4.26
1828 2733 0.318107 CTTGGCAAGACCGCAAACAG 60.318 55.000 22.64 0.00 43.94 3.16
1829 2734 0.749818 TTGGCAAGACCGCAAACAGA 60.750 50.000 0.00 0.00 43.94 3.41
1830 2735 1.282875 GGCAAGACCGCAAACAGAC 59.717 57.895 0.00 0.00 0.00 3.51
1831 2736 1.444119 GGCAAGACCGCAAACAGACA 61.444 55.000 0.00 0.00 0.00 3.41
1832 2737 0.380378 GCAAGACCGCAAACAGACAA 59.620 50.000 0.00 0.00 0.00 3.18
1833 2738 1.859998 GCAAGACCGCAAACAGACAAC 60.860 52.381 0.00 0.00 0.00 3.32
1834 2739 1.021968 AAGACCGCAAACAGACAACC 58.978 50.000 0.00 0.00 0.00 3.77
1835 2740 0.107410 AGACCGCAAACAGACAACCA 60.107 50.000 0.00 0.00 0.00 3.67
1836 2741 0.307760 GACCGCAAACAGACAACCAG 59.692 55.000 0.00 0.00 0.00 4.00
1837 2742 1.101049 ACCGCAAACAGACAACCAGG 61.101 55.000 0.00 0.00 0.00 4.45
1838 2743 0.817634 CCGCAAACAGACAACCAGGA 60.818 55.000 0.00 0.00 0.00 3.86
1839 2744 1.238439 CGCAAACAGACAACCAGGAT 58.762 50.000 0.00 0.00 0.00 3.24
1840 2745 1.608590 CGCAAACAGACAACCAGGATT 59.391 47.619 0.00 0.00 0.00 3.01
1841 2746 2.034558 CGCAAACAGACAACCAGGATTT 59.965 45.455 0.00 0.00 0.00 2.17
1842 2747 3.252215 CGCAAACAGACAACCAGGATTTA 59.748 43.478 0.00 0.00 0.00 1.40
1843 2748 4.613622 CGCAAACAGACAACCAGGATTTAG 60.614 45.833 0.00 0.00 0.00 1.85
1844 2749 4.278419 GCAAACAGACAACCAGGATTTAGT 59.722 41.667 0.00 0.00 0.00 2.24
1845 2750 5.762045 CAAACAGACAACCAGGATTTAGTG 58.238 41.667 0.00 0.00 0.00 2.74
1846 2751 4.706842 ACAGACAACCAGGATTTAGTGT 57.293 40.909 0.00 0.00 0.00 3.55
1847 2752 5.818678 ACAGACAACCAGGATTTAGTGTA 57.181 39.130 0.00 0.00 0.00 2.90
1848 2753 6.374417 ACAGACAACCAGGATTTAGTGTAT 57.626 37.500 0.00 0.00 0.00 2.29
1849 2754 6.779860 ACAGACAACCAGGATTTAGTGTATT 58.220 36.000 0.00 0.00 0.00 1.89
1850 2755 7.231467 ACAGACAACCAGGATTTAGTGTATTT 58.769 34.615 0.00 0.00 0.00 1.40
1851 2756 7.724061 ACAGACAACCAGGATTTAGTGTATTTT 59.276 33.333 0.00 0.00 0.00 1.82
1852 2757 8.576442 CAGACAACCAGGATTTAGTGTATTTTT 58.424 33.333 0.00 0.00 0.00 1.94
1853 2758 8.793592 AGACAACCAGGATTTAGTGTATTTTTC 58.206 33.333 0.00 0.00 0.00 2.29
1854 2759 7.590279 ACAACCAGGATTTAGTGTATTTTTCG 58.410 34.615 0.00 0.00 0.00 3.46
1855 2760 7.446013 ACAACCAGGATTTAGTGTATTTTTCGA 59.554 33.333 0.00 0.00 0.00 3.71
1856 2761 7.611213 ACCAGGATTTAGTGTATTTTTCGAG 57.389 36.000 0.00 0.00 0.00 4.04
1920 2825 8.853469 AAAGTACAGTGCGATACTATAACTTC 57.147 34.615 0.00 0.00 37.60 3.01
1925 2830 8.542497 ACAGTGCGATACTATAACTTCAAAAA 57.458 30.769 0.00 0.00 37.60 1.94
1968 2873 5.767816 ACTTAAGTGGCTACAAAGGTTTG 57.232 39.130 7.48 0.77 43.62 2.93
2001 2908 1.202806 TCTGGAAGGCCACTGACTTTG 60.203 52.381 5.01 0.00 39.92 2.77
2165 3073 9.797642 ATGTTTCATGTCCTAATGAGCATAATA 57.202 29.630 0.00 0.00 37.83 0.98
2205 3113 4.473477 TTTTTGGTTAGGGTGTGTTTGG 57.527 40.909 0.00 0.00 0.00 3.28
2206 3114 3.383698 TTTGGTTAGGGTGTGTTTGGA 57.616 42.857 0.00 0.00 0.00 3.53
2207 3115 3.603965 TTGGTTAGGGTGTGTTTGGAT 57.396 42.857 0.00 0.00 0.00 3.41
2208 3116 3.603965 TGGTTAGGGTGTGTTTGGATT 57.396 42.857 0.00 0.00 0.00 3.01
2209 3117 3.226777 TGGTTAGGGTGTGTTTGGATTG 58.773 45.455 0.00 0.00 0.00 2.67
2210 3118 3.227614 GGTTAGGGTGTGTTTGGATTGT 58.772 45.455 0.00 0.00 0.00 2.71
2211 3119 3.254903 GGTTAGGGTGTGTTTGGATTGTC 59.745 47.826 0.00 0.00 0.00 3.18
2212 3120 1.604604 AGGGTGTGTTTGGATTGTCG 58.395 50.000 0.00 0.00 0.00 4.35
2213 3121 1.133915 AGGGTGTGTTTGGATTGTCGT 60.134 47.619 0.00 0.00 0.00 4.34
2214 3122 1.679153 GGGTGTGTTTGGATTGTCGTT 59.321 47.619 0.00 0.00 0.00 3.85
2215 3123 2.100087 GGGTGTGTTTGGATTGTCGTTT 59.900 45.455 0.00 0.00 0.00 3.60
2216 3124 3.368495 GGTGTGTTTGGATTGTCGTTTC 58.632 45.455 0.00 0.00 0.00 2.78
2217 3125 3.368495 GTGTGTTTGGATTGTCGTTTCC 58.632 45.455 0.00 0.00 0.00 3.13
2218 3126 3.066203 GTGTGTTTGGATTGTCGTTTCCT 59.934 43.478 0.00 0.00 32.95 3.36
2219 3127 3.697045 TGTGTTTGGATTGTCGTTTCCTT 59.303 39.130 0.00 0.00 32.95 3.36
2220 3128 4.158764 TGTGTTTGGATTGTCGTTTCCTTT 59.841 37.500 0.00 0.00 32.95 3.11
2221 3129 4.738252 GTGTTTGGATTGTCGTTTCCTTTC 59.262 41.667 0.00 0.00 32.95 2.62
2222 3130 4.399618 TGTTTGGATTGTCGTTTCCTTTCA 59.600 37.500 0.00 0.00 32.95 2.69
2223 3131 5.105716 TGTTTGGATTGTCGTTTCCTTTCAA 60.106 36.000 0.00 0.00 32.95 2.69
2224 3132 5.584253 TTGGATTGTCGTTTCCTTTCAAA 57.416 34.783 0.00 0.00 32.95 2.69
2225 3133 5.782893 TGGATTGTCGTTTCCTTTCAAAT 57.217 34.783 0.00 0.00 32.95 2.32
2226 3134 6.885952 TGGATTGTCGTTTCCTTTCAAATA 57.114 33.333 0.00 0.00 32.95 1.40
2227 3135 7.461182 TGGATTGTCGTTTCCTTTCAAATAT 57.539 32.000 0.00 0.00 32.95 1.28
2228 3136 8.568676 TGGATTGTCGTTTCCTTTCAAATATA 57.431 30.769 0.00 0.00 32.95 0.86
2229 3137 8.455682 TGGATTGTCGTTTCCTTTCAAATATAC 58.544 33.333 0.00 0.00 32.95 1.47
2230 3138 7.913821 GGATTGTCGTTTCCTTTCAAATATACC 59.086 37.037 0.00 0.00 0.00 2.73
2231 3139 7.989416 TTGTCGTTTCCTTTCAAATATACCT 57.011 32.000 0.00 0.00 0.00 3.08
2232 3140 7.605410 TGTCGTTTCCTTTCAAATATACCTC 57.395 36.000 0.00 0.00 0.00 3.85
2233 3141 7.391620 TGTCGTTTCCTTTCAAATATACCTCT 58.608 34.615 0.00 0.00 0.00 3.69
2234 3142 7.333423 TGTCGTTTCCTTTCAAATATACCTCTG 59.667 37.037 0.00 0.00 0.00 3.35
2235 3143 7.333672 GTCGTTTCCTTTCAAATATACCTCTGT 59.666 37.037 0.00 0.00 0.00 3.41
2236 3144 8.533657 TCGTTTCCTTTCAAATATACCTCTGTA 58.466 33.333 0.00 0.00 0.00 2.74
2237 3145 9.158233 CGTTTCCTTTCAAATATACCTCTGTAA 57.842 33.333 0.00 0.00 0.00 2.41
2257 3165 3.629142 AAAAATACAGACCTCGGAGGG 57.371 47.619 26.94 12.53 40.58 4.30
2258 3166 2.249309 AAATACAGACCTCGGAGGGT 57.751 50.000 26.94 17.39 40.58 4.34
2263 3171 3.374332 GACCTCGGAGGGTCGTTT 58.626 61.111 26.94 5.63 44.94 3.60
2264 3172 1.670015 GACCTCGGAGGGTCGTTTT 59.330 57.895 26.94 4.86 44.94 2.43
2265 3173 0.669625 GACCTCGGAGGGTCGTTTTG 60.670 60.000 26.94 0.00 44.94 2.44
2266 3174 1.370064 CCTCGGAGGGTCGTTTTGT 59.630 57.895 16.59 0.00 0.00 2.83
2267 3175 0.250166 CCTCGGAGGGTCGTTTTGTT 60.250 55.000 16.59 0.00 0.00 2.83
2268 3176 1.589803 CTCGGAGGGTCGTTTTGTTT 58.410 50.000 0.00 0.00 0.00 2.83
2269 3177 1.529865 CTCGGAGGGTCGTTTTGTTTC 59.470 52.381 0.00 0.00 0.00 2.78
2270 3178 0.589708 CGGAGGGTCGTTTTGTTTCC 59.410 55.000 0.00 0.00 0.00 3.13
2271 3179 0.589708 GGAGGGTCGTTTTGTTTCCG 59.410 55.000 0.00 0.00 0.00 4.30
2272 3180 0.589708 GAGGGTCGTTTTGTTTCCGG 59.410 55.000 0.00 0.00 0.00 5.14
2273 3181 1.008194 GGGTCGTTTTGTTTCCGGC 60.008 57.895 0.00 0.00 0.00 6.13
2274 3182 1.008194 GGTCGTTTTGTTTCCGGCC 60.008 57.895 0.00 0.00 39.39 6.13
2275 3183 1.369568 GTCGTTTTGTTTCCGGCCG 60.370 57.895 21.04 21.04 0.00 6.13
2276 3184 2.050805 CGTTTTGTTTCCGGCCGG 60.051 61.111 39.13 39.13 0.00 6.13
2277 3185 2.544698 CGTTTTGTTTCCGGCCGGA 61.545 57.895 42.66 42.66 43.52 5.14
2285 3193 2.031465 TCCGGCCGGAAACTGTTC 59.969 61.111 43.93 0.00 42.05 3.18
2286 3194 2.281208 CCGGCCGGAAACTGTTCA 60.281 61.111 41.82 0.00 37.50 3.18
2287 3195 2.325082 CCGGCCGGAAACTGTTCAG 61.325 63.158 41.82 6.81 37.50 3.02
2288 3196 2.954611 GGCCGGAAACTGTTCAGC 59.045 61.111 5.05 0.00 35.25 4.26
2289 3197 2.556287 GCCGGAAACTGTTCAGCG 59.444 61.111 5.05 0.00 35.25 5.18
2290 3198 2.966309 GCCGGAAACTGTTCAGCGG 61.966 63.158 5.05 10.59 39.93 5.52
2291 3199 2.556287 CGGAAACTGTTCAGCGGC 59.444 61.111 0.00 0.00 35.25 6.53
2292 3200 2.954611 GGAAACTGTTCAGCGGCC 59.045 61.111 0.00 0.00 35.25 6.13
2293 3201 1.896660 GGAAACTGTTCAGCGGCCA 60.897 57.895 2.24 0.00 35.25 5.36
2294 3202 1.576421 GAAACTGTTCAGCGGCCAG 59.424 57.895 2.24 0.00 33.61 4.85
2295 3203 1.152963 AAACTGTTCAGCGGCCAGT 60.153 52.632 2.24 4.12 41.01 4.00
2296 3204 0.107831 AAACTGTTCAGCGGCCAGTA 59.892 50.000 2.24 0.00 38.44 2.74
2297 3205 0.107831 AACTGTTCAGCGGCCAGTAA 59.892 50.000 2.24 0.00 38.44 2.24
2298 3206 0.107831 ACTGTTCAGCGGCCAGTAAA 59.892 50.000 2.24 0.00 37.66 2.01
2299 3207 1.234821 CTGTTCAGCGGCCAGTAAAA 58.765 50.000 2.24 0.00 0.00 1.52
2300 3208 1.812571 CTGTTCAGCGGCCAGTAAAAT 59.187 47.619 2.24 0.00 0.00 1.82
2301 3209 3.006940 CTGTTCAGCGGCCAGTAAAATA 58.993 45.455 2.24 0.00 0.00 1.40
2302 3210 2.745281 TGTTCAGCGGCCAGTAAAATAC 59.255 45.455 2.24 0.00 0.00 1.89
2303 3211 2.745281 GTTCAGCGGCCAGTAAAATACA 59.255 45.455 2.24 0.00 0.00 2.29
2304 3212 3.060736 TCAGCGGCCAGTAAAATACAA 57.939 42.857 2.24 0.00 0.00 2.41
2305 3213 2.745281 TCAGCGGCCAGTAAAATACAAC 59.255 45.455 2.24 0.00 0.00 3.32
2306 3214 2.747446 CAGCGGCCAGTAAAATACAACT 59.253 45.455 2.24 0.00 0.00 3.16
2307 3215 2.747446 AGCGGCCAGTAAAATACAACTG 59.253 45.455 2.24 0.00 42.25 3.16
2308 3216 2.486592 GCGGCCAGTAAAATACAACTGT 59.513 45.455 2.24 0.00 41.25 3.55
2309 3217 3.685756 GCGGCCAGTAAAATACAACTGTA 59.314 43.478 2.24 0.00 41.25 2.74
2310 3218 4.154556 GCGGCCAGTAAAATACAACTGTAA 59.845 41.667 2.24 0.00 41.25 2.41
2311 3219 5.335035 GCGGCCAGTAAAATACAACTGTAAA 60.335 40.000 2.24 0.00 41.25 2.01
2312 3220 6.624204 GCGGCCAGTAAAATACAACTGTAAAT 60.624 38.462 2.24 0.00 41.25 1.40
2313 3221 7.309920 CGGCCAGTAAAATACAACTGTAAATT 58.690 34.615 2.24 0.00 41.25 1.82
2314 3222 8.452534 CGGCCAGTAAAATACAACTGTAAATTA 58.547 33.333 2.24 0.00 41.25 1.40
2323 3231 9.752961 AAATACAACTGTAAATTAAACACACCC 57.247 29.630 0.00 0.00 33.76 4.61
2324 3232 5.823353 ACAACTGTAAATTAAACACACCCG 58.177 37.500 0.00 0.00 0.00 5.28
2325 3233 5.357596 ACAACTGTAAATTAAACACACCCGT 59.642 36.000 0.00 0.00 0.00 5.28
2326 3234 6.541641 ACAACTGTAAATTAAACACACCCGTA 59.458 34.615 0.00 0.00 0.00 4.02
2327 3235 7.229106 ACAACTGTAAATTAAACACACCCGTAT 59.771 33.333 0.00 0.00 0.00 3.06
2328 3236 7.748691 ACTGTAAATTAAACACACCCGTATT 57.251 32.000 0.00 0.00 0.00 1.89
2329 3237 7.586747 ACTGTAAATTAAACACACCCGTATTG 58.413 34.615 0.00 0.00 0.00 1.90
2330 3238 7.444792 ACTGTAAATTAAACACACCCGTATTGA 59.555 33.333 0.00 0.00 0.00 2.57
2331 3239 8.162878 TGTAAATTAAACACACCCGTATTGAA 57.837 30.769 0.00 0.00 0.00 2.69
2332 3240 8.627403 TGTAAATTAAACACACCCGTATTGAAA 58.373 29.630 0.00 0.00 0.00 2.69
2333 3241 9.628746 GTAAATTAAACACACCCGTATTGAAAT 57.371 29.630 0.00 0.00 0.00 2.17
2335 3243 9.628746 AAATTAAACACACCCGTATTGAAATAC 57.371 29.630 3.53 3.53 38.27 1.89
2336 3244 7.741027 TTAAACACACCCGTATTGAAATACA 57.259 32.000 12.42 0.00 40.97 2.29
2337 3245 5.616488 AACACACCCGTATTGAAATACAC 57.384 39.130 12.42 0.00 40.97 2.90
2338 3246 4.901868 ACACACCCGTATTGAAATACACT 58.098 39.130 12.42 0.00 40.97 3.55
2339 3247 4.693566 ACACACCCGTATTGAAATACACTG 59.306 41.667 12.42 6.96 40.97 3.66
2340 3248 4.932799 CACACCCGTATTGAAATACACTGA 59.067 41.667 12.42 0.00 40.97 3.41
2341 3249 5.584649 CACACCCGTATTGAAATACACTGAT 59.415 40.000 12.42 0.00 40.97 2.90
2342 3250 5.815740 ACACCCGTATTGAAATACACTGATC 59.184 40.000 12.42 0.00 40.97 2.92
2343 3251 5.236478 CACCCGTATTGAAATACACTGATCC 59.764 44.000 12.42 0.00 40.97 3.36
2344 3252 4.755123 CCCGTATTGAAATACACTGATCCC 59.245 45.833 12.42 0.00 40.97 3.85
2345 3253 5.364778 CCGTATTGAAATACACTGATCCCA 58.635 41.667 12.42 0.00 40.97 4.37
2346 3254 5.820423 CCGTATTGAAATACACTGATCCCAA 59.180 40.000 12.42 0.00 40.97 4.12
2347 3255 6.017934 CCGTATTGAAATACACTGATCCCAAG 60.018 42.308 12.42 0.00 40.97 3.61
2348 3256 5.841957 ATTGAAATACACTGATCCCAAGC 57.158 39.130 0.00 0.00 0.00 4.01
2349 3257 4.299586 TGAAATACACTGATCCCAAGCA 57.700 40.909 0.00 0.00 0.00 3.91
2350 3258 4.009675 TGAAATACACTGATCCCAAGCAC 58.990 43.478 0.00 0.00 0.00 4.40
2351 3259 2.315925 ATACACTGATCCCAAGCACG 57.684 50.000 0.00 0.00 0.00 5.34
2352 3260 0.249120 TACACTGATCCCAAGCACGG 59.751 55.000 0.00 0.00 0.00 4.94
2353 3261 2.045926 ACTGATCCCAAGCACGGC 60.046 61.111 0.00 0.00 0.00 5.68
2354 3262 2.825836 CTGATCCCAAGCACGGCC 60.826 66.667 0.00 0.00 0.00 6.13
2355 3263 3.329889 TGATCCCAAGCACGGCCT 61.330 61.111 0.00 0.00 0.00 5.19
2356 3264 2.044946 GATCCCAAGCACGGCCTT 60.045 61.111 0.00 0.00 0.00 4.35
2357 3265 1.223487 GATCCCAAGCACGGCCTTA 59.777 57.895 0.00 0.00 0.00 2.69
2358 3266 0.393808 GATCCCAAGCACGGCCTTAA 60.394 55.000 0.00 0.00 0.00 1.85
2359 3267 0.258774 ATCCCAAGCACGGCCTTAAT 59.741 50.000 0.00 0.00 0.00 1.40
2360 3268 0.679640 TCCCAAGCACGGCCTTAATG 60.680 55.000 0.00 0.00 0.00 1.90
2361 3269 1.666209 CCCAAGCACGGCCTTAATGG 61.666 60.000 0.00 2.68 39.35 3.16
2362 3270 0.679640 CCAAGCACGGCCTTAATGGA 60.680 55.000 0.00 0.00 38.35 3.41
2363 3271 1.173043 CAAGCACGGCCTTAATGGAA 58.827 50.000 0.00 0.00 38.35 3.53
2364 3272 1.135402 CAAGCACGGCCTTAATGGAAC 60.135 52.381 0.00 0.00 38.35 3.62
2365 3273 1.024579 AGCACGGCCTTAATGGAACG 61.025 55.000 0.00 0.00 41.40 3.95
2366 3274 1.427819 CACGGCCTTAATGGAACGC 59.572 57.895 0.00 0.00 40.00 4.84
2367 3275 1.003112 ACGGCCTTAATGGAACGCA 60.003 52.632 0.00 0.00 40.00 5.24
2368 3276 0.393808 ACGGCCTTAATGGAACGCAT 60.394 50.000 0.00 0.00 40.00 4.73
2369 3277 0.029300 CGGCCTTAATGGAACGCATG 59.971 55.000 0.00 0.00 38.35 4.06
2370 3278 1.102978 GGCCTTAATGGAACGCATGT 58.897 50.000 0.00 0.00 38.35 3.21
2371 3279 1.476488 GGCCTTAATGGAACGCATGTT 59.524 47.619 0.00 0.00 42.23 2.71
2372 3280 2.529151 GCCTTAATGGAACGCATGTTG 58.471 47.619 0.00 0.00 38.78 3.33
2373 3281 2.094752 GCCTTAATGGAACGCATGTTGT 60.095 45.455 0.00 0.00 38.78 3.32
2374 3282 3.500982 CCTTAATGGAACGCATGTTGTG 58.499 45.455 0.00 0.00 38.78 3.33
2375 3283 3.190327 CCTTAATGGAACGCATGTTGTGA 59.810 43.478 0.00 0.00 38.78 3.58
2376 3284 4.142403 CCTTAATGGAACGCATGTTGTGAT 60.142 41.667 0.00 0.00 38.78 3.06
2377 3285 2.925578 ATGGAACGCATGTTGTGATG 57.074 45.000 0.00 0.00 38.78 3.07
2378 3286 1.603456 TGGAACGCATGTTGTGATGT 58.397 45.000 0.00 0.00 38.78 3.06
2379 3287 2.772287 TGGAACGCATGTTGTGATGTA 58.228 42.857 0.00 0.00 38.78 2.29
2380 3288 2.741517 TGGAACGCATGTTGTGATGTAG 59.258 45.455 0.00 0.00 38.78 2.74
2381 3289 2.742053 GGAACGCATGTTGTGATGTAGT 59.258 45.455 0.00 0.00 38.78 2.73
2382 3290 3.930229 GGAACGCATGTTGTGATGTAGTA 59.070 43.478 0.00 0.00 38.78 1.82
2383 3291 4.032900 GGAACGCATGTTGTGATGTAGTAG 59.967 45.833 0.00 0.00 38.78 2.57
2384 3292 4.188247 ACGCATGTTGTGATGTAGTAGT 57.812 40.909 0.00 0.00 0.00 2.73
2385 3293 5.319140 ACGCATGTTGTGATGTAGTAGTA 57.681 39.130 0.00 0.00 0.00 1.82
2386 3294 5.100259 ACGCATGTTGTGATGTAGTAGTAC 58.900 41.667 0.37 0.37 0.00 2.73
2387 3295 4.204370 CGCATGTTGTGATGTAGTAGTACG 59.796 45.833 3.32 0.00 30.95 3.67
2388 3296 5.100259 GCATGTTGTGATGTAGTAGTACGT 58.900 41.667 1.91 1.91 30.95 3.57
2389 3297 5.575606 GCATGTTGTGATGTAGTAGTACGTT 59.424 40.000 3.94 0.00 30.95 3.99
2390 3298 6.090358 GCATGTTGTGATGTAGTAGTACGTTT 59.910 38.462 3.94 0.00 30.95 3.60
2391 3299 7.359765 GCATGTTGTGATGTAGTAGTACGTTTT 60.360 37.037 3.94 0.00 30.95 2.43
2392 3300 9.131416 CATGTTGTGATGTAGTAGTACGTTTTA 57.869 33.333 3.94 0.00 30.95 1.52
2393 3301 8.732413 TGTTGTGATGTAGTAGTACGTTTTAG 57.268 34.615 3.94 0.00 30.95 1.85
2394 3302 7.809331 TGTTGTGATGTAGTAGTACGTTTTAGG 59.191 37.037 3.94 0.00 30.95 2.69
2395 3303 6.324819 TGTGATGTAGTAGTACGTTTTAGGC 58.675 40.000 3.94 0.00 30.95 3.93
2396 3304 6.151648 TGTGATGTAGTAGTACGTTTTAGGCT 59.848 38.462 3.94 0.00 30.95 4.58
2397 3305 7.336679 TGTGATGTAGTAGTACGTTTTAGGCTA 59.663 37.037 3.94 0.00 30.95 3.93
2398 3306 7.854916 GTGATGTAGTAGTACGTTTTAGGCTAG 59.145 40.741 3.94 0.00 30.95 3.42
2399 3307 7.554118 TGATGTAGTAGTACGTTTTAGGCTAGT 59.446 37.037 3.94 0.00 30.95 2.57
2400 3308 7.308782 TGTAGTAGTACGTTTTAGGCTAGTC 57.691 40.000 0.00 0.00 30.95 2.59
2401 3309 6.878923 TGTAGTAGTACGTTTTAGGCTAGTCA 59.121 38.462 0.00 0.00 30.95 3.41
2402 3310 7.554118 TGTAGTAGTACGTTTTAGGCTAGTCAT 59.446 37.037 0.00 0.00 30.95 3.06
2403 3311 9.046296 GTAGTAGTACGTTTTAGGCTAGTCATA 57.954 37.037 0.00 0.00 0.00 2.15
2404 3312 8.152309 AGTAGTACGTTTTAGGCTAGTCATAG 57.848 38.462 0.00 0.00 0.00 2.23
2405 3313 7.772757 AGTAGTACGTTTTAGGCTAGTCATAGT 59.227 37.037 0.00 0.00 0.00 2.12
2406 3314 6.793349 AGTACGTTTTAGGCTAGTCATAGTG 58.207 40.000 0.00 0.00 0.00 2.74
2407 3315 5.007385 ACGTTTTAGGCTAGTCATAGTGG 57.993 43.478 0.00 0.00 0.00 4.00
2408 3316 4.142004 ACGTTTTAGGCTAGTCATAGTGGG 60.142 45.833 0.00 0.00 0.00 4.61
2409 3317 4.098960 CGTTTTAGGCTAGTCATAGTGGGA 59.901 45.833 0.00 0.00 0.00 4.37
2410 3318 5.394883 CGTTTTAGGCTAGTCATAGTGGGAA 60.395 44.000 0.00 0.00 0.00 3.97
2411 3319 6.592870 GTTTTAGGCTAGTCATAGTGGGAAT 58.407 40.000 0.00 0.00 0.00 3.01
2412 3320 7.470981 CGTTTTAGGCTAGTCATAGTGGGAATA 60.471 40.741 0.00 0.00 0.00 1.75
2413 3321 7.924358 TTTAGGCTAGTCATAGTGGGAATAA 57.076 36.000 0.00 0.00 0.00 1.40
2414 3322 5.810080 AGGCTAGTCATAGTGGGAATAAC 57.190 43.478 0.00 0.00 0.00 1.89
2415 3323 5.468658 AGGCTAGTCATAGTGGGAATAACT 58.531 41.667 0.00 0.00 0.00 2.24
2416 3324 5.905913 AGGCTAGTCATAGTGGGAATAACTT 59.094 40.000 0.00 0.00 0.00 2.66
2417 3325 7.073854 AGGCTAGTCATAGTGGGAATAACTTA 58.926 38.462 0.00 0.00 0.00 2.24
2418 3326 7.233757 AGGCTAGTCATAGTGGGAATAACTTAG 59.766 40.741 0.00 0.00 0.00 2.18
2419 3327 6.869388 GCTAGTCATAGTGGGAATAACTTAGC 59.131 42.308 0.00 0.00 0.00 3.09
2420 3328 7.256012 GCTAGTCATAGTGGGAATAACTTAGCT 60.256 40.741 0.00 0.00 31.10 3.32
2421 3329 9.298250 CTAGTCATAGTGGGAATAACTTAGCTA 57.702 37.037 0.00 0.00 0.00 3.32
2422 3330 8.184304 AGTCATAGTGGGAATAACTTAGCTAG 57.816 38.462 0.00 0.00 0.00 3.42
2423 3331 7.785506 AGTCATAGTGGGAATAACTTAGCTAGT 59.214 37.037 0.00 0.00 39.32 2.57
2424 3332 9.075678 GTCATAGTGGGAATAACTTAGCTAGTA 57.924 37.037 0.00 0.00 35.54 1.82
2425 3333 9.650714 TCATAGTGGGAATAACTTAGCTAGTAA 57.349 33.333 0.00 0.00 35.54 2.24
2426 3334 9.694137 CATAGTGGGAATAACTTAGCTAGTAAC 57.306 37.037 0.00 0.00 35.54 2.50
2427 3335 7.729124 AGTGGGAATAACTTAGCTAGTAACA 57.271 36.000 0.00 0.00 35.54 2.41
2428 3336 8.320338 AGTGGGAATAACTTAGCTAGTAACAT 57.680 34.615 0.00 0.00 35.54 2.71
2429 3337 9.430399 AGTGGGAATAACTTAGCTAGTAACATA 57.570 33.333 0.00 0.00 35.54 2.29
2430 3338 9.694137 GTGGGAATAACTTAGCTAGTAACATAG 57.306 37.037 0.00 0.00 35.54 2.23
2439 3347 2.468040 GCTAGTAACATAGCGCACTTCG 59.532 50.000 11.47 0.00 38.90 3.79
2440 3348 2.933495 AGTAACATAGCGCACTTCGA 57.067 45.000 11.47 0.00 41.67 3.71
2441 3349 2.798680 AGTAACATAGCGCACTTCGAG 58.201 47.619 11.47 0.00 41.67 4.04
2442 3350 2.422479 AGTAACATAGCGCACTTCGAGA 59.578 45.455 11.47 0.00 41.67 4.04
2443 3351 2.363788 AACATAGCGCACTTCGAGAA 57.636 45.000 11.47 0.00 41.67 2.87
2444 3352 2.363788 ACATAGCGCACTTCGAGAAA 57.636 45.000 11.47 0.00 41.67 2.52
2445 3353 2.683968 ACATAGCGCACTTCGAGAAAA 58.316 42.857 11.47 0.00 41.67 2.29
2446 3354 3.262420 ACATAGCGCACTTCGAGAAAAT 58.738 40.909 11.47 0.00 41.67 1.82
2447 3355 3.684788 ACATAGCGCACTTCGAGAAAATT 59.315 39.130 11.47 0.00 41.67 1.82
2448 3356 2.882742 AGCGCACTTCGAGAAAATTC 57.117 45.000 11.47 0.00 41.67 2.17
2449 3357 2.417719 AGCGCACTTCGAGAAAATTCT 58.582 42.857 11.47 0.00 41.67 2.40
2450 3358 2.158449 AGCGCACTTCGAGAAAATTCTG 59.842 45.455 11.47 0.00 41.67 3.02
2451 3359 2.499896 CGCACTTCGAGAAAATTCTGC 58.500 47.619 0.00 0.00 41.67 4.26
2452 3360 2.158449 CGCACTTCGAGAAAATTCTGCT 59.842 45.455 0.00 0.00 41.67 4.24
2453 3361 3.364366 CGCACTTCGAGAAAATTCTGCTT 60.364 43.478 0.00 0.00 41.67 3.91
2454 3362 4.143115 CGCACTTCGAGAAAATTCTGCTTA 60.143 41.667 0.00 0.00 41.67 3.09
2455 3363 5.446473 CGCACTTCGAGAAAATTCTGCTTAT 60.446 40.000 0.00 0.00 41.67 1.73
2456 3364 5.736358 GCACTTCGAGAAAATTCTGCTTATG 59.264 40.000 0.00 0.00 37.73 1.90
2457 3365 6.621596 GCACTTCGAGAAAATTCTGCTTATGT 60.622 38.462 0.00 0.00 37.73 2.29
2458 3366 6.740002 CACTTCGAGAAAATTCTGCTTATGTG 59.260 38.462 0.00 0.00 37.73 3.21
2459 3367 6.650807 ACTTCGAGAAAATTCTGCTTATGTGA 59.349 34.615 0.00 0.00 37.73 3.58
2460 3368 6.408858 TCGAGAAAATTCTGCTTATGTGAC 57.591 37.500 0.00 0.00 37.73 3.67
2461 3369 5.062183 TCGAGAAAATTCTGCTTATGTGACG 59.938 40.000 0.00 0.00 37.73 4.35
2462 3370 5.062183 CGAGAAAATTCTGCTTATGTGACGA 59.938 40.000 0.00 0.00 37.73 4.20
2463 3371 6.414408 AGAAAATTCTGCTTATGTGACGAG 57.586 37.500 0.00 0.00 35.89 4.18
2464 3372 5.934625 AGAAAATTCTGCTTATGTGACGAGT 59.065 36.000 0.00 0.00 35.89 4.18
2465 3373 7.097192 AGAAAATTCTGCTTATGTGACGAGTA 58.903 34.615 0.00 0.00 35.89 2.59
2466 3374 7.602644 AGAAAATTCTGCTTATGTGACGAGTAA 59.397 33.333 0.00 0.00 35.89 2.24
2467 3375 7.849804 AAATTCTGCTTATGTGACGAGTAAT 57.150 32.000 0.00 0.00 0.00 1.89
2468 3376 7.849804 AATTCTGCTTATGTGACGAGTAATT 57.150 32.000 0.00 0.00 0.00 1.40
2469 3377 8.942338 AATTCTGCTTATGTGACGAGTAATTA 57.058 30.769 0.00 0.00 0.00 1.40
2470 3378 8.942338 ATTCTGCTTATGTGACGAGTAATTAA 57.058 30.769 0.00 0.00 0.00 1.40
2471 3379 8.942338 TTCTGCTTATGTGACGAGTAATTAAT 57.058 30.769 0.00 0.00 0.00 1.40
2472 3380 8.352752 TCTGCTTATGTGACGAGTAATTAATG 57.647 34.615 0.00 0.00 0.00 1.90
2473 3381 8.194769 TCTGCTTATGTGACGAGTAATTAATGA 58.805 33.333 0.00 0.00 0.00 2.57
2474 3382 8.352752 TGCTTATGTGACGAGTAATTAATGAG 57.647 34.615 0.00 0.00 0.00 2.90
2475 3383 8.194769 TGCTTATGTGACGAGTAATTAATGAGA 58.805 33.333 0.00 0.00 0.00 3.27
2496 3404 5.961897 AGAGCAGATCATGGGGATAAAATT 58.038 37.500 0.00 0.00 36.00 1.82
2574 3482 3.817084 TGCAATACCAGCAGCATTATCTC 59.183 43.478 0.00 0.00 37.02 2.75
2575 3483 4.070716 GCAATACCAGCAGCATTATCTCT 58.929 43.478 0.00 0.00 0.00 3.10
2610 3518 3.506067 GGGTGATTTCAACGAACCAATCT 59.494 43.478 0.00 0.00 33.46 2.40
2680 3588 1.531149 ACGTGATGCTTCGAACAAAGG 59.469 47.619 0.00 0.53 0.00 3.11
2710 3618 3.330405 TCAGAATGATTGGTGGGAGTTGA 59.670 43.478 0.00 0.00 42.56 3.18
2723 3631 3.146847 GGGAGTTGACACTAAGGTTTGG 58.853 50.000 0.00 0.00 31.22 3.28
2735 3643 6.014925 ACACTAAGGTTTGGTTTGTTGACTTT 60.015 34.615 0.00 0.00 0.00 2.66
2738 3646 5.072040 AGGTTTGGTTTGTTGACTTTCAG 57.928 39.130 0.00 0.00 0.00 3.02
2786 3694 3.258372 AGACAAAACCAGTCTGCGATCTA 59.742 43.478 0.00 0.00 44.23 1.98
2809 3717 3.211865 CATCATGGGGATCTGACAAGTG 58.788 50.000 0.00 0.00 32.57 3.16
2814 3722 1.561542 GGGGATCTGACAAGTGTCCAT 59.438 52.381 8.91 1.37 44.15 3.41
2895 3803 9.678260 GATCTTTGGTGCCTTGAAGATATATAT 57.322 33.333 0.00 0.00 38.56 0.86
2928 3837 3.131933 CACACCAACCCAATGACTTTTCA 59.868 43.478 0.00 0.00 35.73 2.69
2945 3860 8.260114 TGACTTTTCATTGATGAGTATCTAGCA 58.740 33.333 3.30 0.00 38.19 3.49
2986 3901 4.279420 TGCTATATCAGGTCTAGTGCAGTG 59.721 45.833 3.69 0.00 0.00 3.66
3002 3917 4.210120 GTGCAGTGTGCTAGATACATTAGC 59.790 45.833 0.00 4.75 45.31 3.09
3035 3950 4.125703 CACTGAGATATGGAAACTCTGGC 58.874 47.826 0.00 0.00 35.16 4.85
3051 3970 5.158141 ACTCTGGCCCAATATCTCTTCATA 58.842 41.667 0.00 0.00 0.00 2.15
3065 3984 5.148502 TCTCTTCATAACCCTTAGGCCTAG 58.851 45.833 13.36 4.13 36.11 3.02
3088 4007 6.022315 AGATGGGTCCTTATCTCTATCAAGG 58.978 44.000 4.05 0.00 40.23 3.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 16 7.202526 AGATGATCATGTTTTTCAACGTGTTT 58.797 30.769 14.30 0.00 46.32 2.83
77 79 9.814899 ACAGACATTTTCAATAAACAACATGAA 57.185 25.926 0.00 0.00 0.00 2.57
78 80 9.247126 CACAGACATTTTCAATAAACAACATGA 57.753 29.630 0.00 0.00 0.00 3.07
81 83 6.478344 GGCACAGACATTTTCAATAAACAACA 59.522 34.615 0.00 0.00 0.00 3.33
84 86 6.154203 TGGCACAGACATTTTCAATAAACA 57.846 33.333 0.00 0.00 0.00 2.83
218 222 9.289303 GCACGAAATAAAAATTATGTGTCTGAT 57.711 29.630 0.00 0.00 0.00 2.90
219 223 7.753132 GGCACGAAATAAAAATTATGTGTCTGA 59.247 33.333 0.00 0.00 0.00 3.27
220 224 7.540400 TGGCACGAAATAAAAATTATGTGTCTG 59.460 33.333 0.00 0.00 32.31 3.51
222 226 7.540745 ACTGGCACGAAATAAAAATTATGTGTC 59.459 33.333 0.00 0.00 0.00 3.67
224 228 7.810766 ACTGGCACGAAATAAAAATTATGTG 57.189 32.000 0.00 0.00 0.00 3.21
226 230 9.781834 TCTAACTGGCACGAAATAAAAATTATG 57.218 29.630 0.00 0.00 0.00 1.90
231 235 7.932335 TCTTTCTAACTGGCACGAAATAAAAA 58.068 30.769 0.00 0.00 0.00 1.94
232 236 7.499321 TCTTTCTAACTGGCACGAAATAAAA 57.501 32.000 0.00 0.00 0.00 1.52
234 238 6.653320 ACATCTTTCTAACTGGCACGAAATAA 59.347 34.615 0.00 0.00 0.00 1.40
236 240 5.003804 ACATCTTTCTAACTGGCACGAAAT 58.996 37.500 0.00 0.00 0.00 2.17
237 241 4.385825 ACATCTTTCTAACTGGCACGAAA 58.614 39.130 0.00 0.00 0.00 3.46
238 242 4.002906 ACATCTTTCTAACTGGCACGAA 57.997 40.909 0.00 0.00 0.00 3.85
239 243 3.678056 ACATCTTTCTAACTGGCACGA 57.322 42.857 0.00 0.00 0.00 4.35
240 244 3.997021 AGAACATCTTTCTAACTGGCACG 59.003 43.478 0.00 0.00 0.00 5.34
296 300 6.373779 AGACTTATCAAAAATGTCAGCAACG 58.626 36.000 0.00 0.00 0.00 4.10
300 304 8.801715 TTTGAAGACTTATCAAAAATGTCAGC 57.198 30.769 0.71 0.00 42.19 4.26
436 467 5.808030 TCATATACGCGTTGAACATTTCTCA 59.192 36.000 20.78 0.00 0.00 3.27
439 470 7.713792 TTTTCATATACGCGTTGAACATTTC 57.286 32.000 20.78 0.00 0.00 2.17
490 521 5.233263 CGGTGTTCATTGTTTTCGGATTTTT 59.767 36.000 0.00 0.00 0.00 1.94
493 524 3.566322 TCGGTGTTCATTGTTTTCGGATT 59.434 39.130 0.00 0.00 0.00 3.01
494 525 3.142951 TCGGTGTTCATTGTTTTCGGAT 58.857 40.909 0.00 0.00 0.00 4.18
495 526 2.562635 TCGGTGTTCATTGTTTTCGGA 58.437 42.857 0.00 0.00 0.00 4.55
496 527 3.552604 ATCGGTGTTCATTGTTTTCGG 57.447 42.857 0.00 0.00 0.00 4.30
497 528 5.445939 CCTCTATCGGTGTTCATTGTTTTCG 60.446 44.000 0.00 0.00 0.00 3.46
498 529 5.642063 TCCTCTATCGGTGTTCATTGTTTTC 59.358 40.000 0.00 0.00 0.00 2.29
501 532 4.819105 TCCTCTATCGGTGTTCATTGTT 57.181 40.909 0.00 0.00 0.00 2.83
502 533 4.819105 TTCCTCTATCGGTGTTCATTGT 57.181 40.909 0.00 0.00 0.00 2.71
503 534 4.935205 TGTTTCCTCTATCGGTGTTCATTG 59.065 41.667 0.00 0.00 0.00 2.82
504 535 4.935808 GTGTTTCCTCTATCGGTGTTCATT 59.064 41.667 0.00 0.00 0.00 2.57
554 588 3.636313 TTACGAGCTTCCGCGTGGG 62.636 63.158 16.49 0.23 46.76 4.61
604 638 5.128171 GTGGTTTAGTTTCTTGGGAGGTTTT 59.872 40.000 0.00 0.00 0.00 2.43
633 669 3.183323 CGGTCCAATAACGCGCGT 61.183 61.111 32.73 32.73 0.00 6.01
634 670 3.920553 CCGGTCCAATAACGCGCG 61.921 66.667 30.96 30.96 0.00 6.86
635 671 4.232248 GCCGGTCCAATAACGCGC 62.232 66.667 5.73 0.00 0.00 6.86
636 672 3.569690 GGCCGGTCCAATAACGCG 61.570 66.667 3.53 3.53 34.01 6.01
637 673 2.437002 TGGCCGGTCCAATAACGC 60.437 61.111 14.27 0.00 43.21 4.84
648 1462 2.109126 GCTTCTGCTAGTTGGCCGG 61.109 63.158 0.00 0.00 36.03 6.13
649 1463 2.456119 CGCTTCTGCTAGTTGGCCG 61.456 63.158 0.00 0.00 36.97 6.13
654 1468 0.108424 CTCTGGCGCTTCTGCTAGTT 60.108 55.000 7.64 0.00 43.26 2.24
665 1479 1.153667 CTCTTCTCACCTCTGGCGC 60.154 63.158 0.00 0.00 0.00 6.53
696 1510 4.877270 CGAAAGCTATGTCTCGCTTATC 57.123 45.455 0.00 0.00 45.03 1.75
778 1607 1.310933 GGATCACTGTTGCTGGGCTG 61.311 60.000 0.00 0.00 0.00 4.85
779 1608 1.001641 GGATCACTGTTGCTGGGCT 60.002 57.895 0.00 0.00 0.00 5.19
780 1609 1.001641 AGGATCACTGTTGCTGGGC 60.002 57.895 0.00 0.00 0.00 5.36
781 1610 2.864114 CAGGATCACTGTTGCTGGG 58.136 57.895 0.00 0.00 42.42 4.45
790 1619 2.368221 GGAGCAGATTAGCAGGATCACT 59.632 50.000 0.00 0.00 36.85 3.41
791 1620 2.368221 AGGAGCAGATTAGCAGGATCAC 59.632 50.000 0.00 0.00 36.85 3.06
798 1627 2.692557 GAGACAGAGGAGCAGATTAGCA 59.307 50.000 0.00 0.00 36.85 3.49
800 1629 4.889409 AGAAGAGACAGAGGAGCAGATTAG 59.111 45.833 0.00 0.00 0.00 1.73
811 1640 8.134895 GGAACTATGTGATTAGAAGAGACAGAG 58.865 40.741 0.00 0.00 33.19 3.35
812 1641 7.615757 TGGAACTATGTGATTAGAAGAGACAGA 59.384 37.037 0.00 0.00 0.00 3.41
823 1652 6.895756 AGTAGTCTGGTGGAACTATGTGATTA 59.104 38.462 0.00 0.00 36.74 1.75
840 1680 2.991434 ACACGCACAGTAGTAGTCTG 57.009 50.000 0.00 0.00 38.68 3.51
841 1681 3.672808 AGTACACGCACAGTAGTAGTCT 58.327 45.455 0.00 0.00 0.00 3.24
842 1682 3.181512 GGAGTACACGCACAGTAGTAGTC 60.182 52.174 0.00 0.00 36.80 2.59
843 1683 2.746362 GGAGTACACGCACAGTAGTAGT 59.254 50.000 0.00 0.00 0.00 2.73
844 1684 3.008330 AGGAGTACACGCACAGTAGTAG 58.992 50.000 0.00 0.00 0.00 2.57
845 1685 2.745821 CAGGAGTACACGCACAGTAGTA 59.254 50.000 0.00 0.00 0.00 1.82
846 1686 1.540267 CAGGAGTACACGCACAGTAGT 59.460 52.381 0.00 0.00 0.00 2.73
847 1687 1.732732 GCAGGAGTACACGCACAGTAG 60.733 57.143 0.00 0.00 0.00 2.57
848 1688 0.242825 GCAGGAGTACACGCACAGTA 59.757 55.000 0.00 0.00 0.00 2.74
849 1689 1.006102 GCAGGAGTACACGCACAGT 60.006 57.895 0.00 0.00 0.00 3.55
850 1690 1.006220 TGCAGGAGTACACGCACAG 60.006 57.895 0.00 0.00 0.00 3.66
893 1733 0.601558 TGGGTGTGAGCTAGTCGAAC 59.398 55.000 0.00 0.00 0.00 3.95
894 1734 1.334160 TTGGGTGTGAGCTAGTCGAA 58.666 50.000 0.00 0.00 0.00 3.71
895 1735 1.476891 GATTGGGTGTGAGCTAGTCGA 59.523 52.381 0.00 0.00 0.00 4.20
896 1736 1.471676 GGATTGGGTGTGAGCTAGTCG 60.472 57.143 0.00 0.00 0.00 4.18
957 1798 0.101219 GATTGAAAGGGCGCCATCAC 59.899 55.000 30.85 18.96 0.00 3.06
963 1810 1.474077 ACTGATTGATTGAAAGGGCGC 59.526 47.619 0.00 0.00 0.00 6.53
983 1830 3.184628 AGGGAATCAGACAATCAGTGGA 58.815 45.455 0.00 0.00 0.00 4.02
988 1835 1.134401 GGCGAGGGAATCAGACAATCA 60.134 52.381 0.00 0.00 0.00 2.57
989 1836 1.134401 TGGCGAGGGAATCAGACAATC 60.134 52.381 0.00 0.00 0.00 2.67
990 1837 0.911769 TGGCGAGGGAATCAGACAAT 59.088 50.000 0.00 0.00 0.00 2.71
991 1838 0.036388 GTGGCGAGGGAATCAGACAA 60.036 55.000 0.00 0.00 0.00 3.18
992 1839 1.596934 GTGGCGAGGGAATCAGACA 59.403 57.895 0.00 0.00 0.00 3.41
993 1840 1.153349 GGTGGCGAGGGAATCAGAC 60.153 63.158 0.00 0.00 0.00 3.51
994 1841 0.982852 ATGGTGGCGAGGGAATCAGA 60.983 55.000 0.00 0.00 0.00 3.27
995 1842 0.816825 CATGGTGGCGAGGGAATCAG 60.817 60.000 0.00 0.00 0.00 2.90
1102 1975 1.671901 GGAGCTGAGGAAGAGGGTCG 61.672 65.000 0.00 0.00 0.00 4.79
1134 2007 2.420129 GGAGCTTCGAGAGAGAGAGAGT 60.420 54.545 0.00 0.00 43.69 3.24
1135 2008 2.213499 GGAGCTTCGAGAGAGAGAGAG 58.787 57.143 0.00 0.00 43.69 3.20
1136 2009 1.472552 CGGAGCTTCGAGAGAGAGAGA 60.473 57.143 9.41 0.00 43.69 3.10
1137 2010 0.937304 CGGAGCTTCGAGAGAGAGAG 59.063 60.000 9.41 0.00 43.69 3.20
1138 2011 0.250793 ACGGAGCTTCGAGAGAGAGA 59.749 55.000 24.16 0.00 43.69 3.10
1139 2012 0.376852 CACGGAGCTTCGAGAGAGAG 59.623 60.000 24.16 0.00 43.69 3.20
1140 2013 1.027255 CCACGGAGCTTCGAGAGAGA 61.027 60.000 24.16 0.00 43.69 3.10
1141 2014 1.431440 CCACGGAGCTTCGAGAGAG 59.569 63.158 24.16 5.04 43.69 3.20
1142 2015 2.701780 GCCACGGAGCTTCGAGAGA 61.702 63.158 24.16 0.00 39.20 3.10
1143 2016 2.202676 GCCACGGAGCTTCGAGAG 60.203 66.667 24.16 10.08 0.00 3.20
1318 2203 1.375098 GAAGAGCATGAGCAGCACCC 61.375 60.000 0.00 0.00 45.49 4.61
1319 2204 1.703438 CGAAGAGCATGAGCAGCACC 61.703 60.000 0.00 0.00 45.49 5.01
1386 2271 0.599558 GCACCATGAAGCACACACAT 59.400 50.000 0.00 0.00 0.00 3.21
1388 2273 0.670162 AAGCACCATGAAGCACACAC 59.330 50.000 11.15 0.00 0.00 3.82
1410 2303 7.704472 CGTACATAAGAAAAGCAGAGAGAGAAT 59.296 37.037 0.00 0.00 0.00 2.40
1453 2346 7.433537 AGCATCCTAGCTTTACTAAACCTTA 57.566 36.000 0.00 0.00 43.70 2.69
1454 2347 6.314899 AGCATCCTAGCTTTACTAAACCTT 57.685 37.500 0.00 0.00 43.70 3.50
1455 2348 5.452077 CGAGCATCCTAGCTTTACTAAACCT 60.452 44.000 0.00 0.00 46.75 3.50
1467 2360 0.246086 CATCCTCCGAGCATCCTAGC 59.754 60.000 0.00 0.00 0.00 3.42
1528 2421 7.946207 TCATAGCTCTTTATTACTGAGACCAG 58.054 38.462 0.00 0.00 45.76 4.00
1568 2462 0.249398 AGGAAAACCATCCGTCCGAG 59.751 55.000 0.00 0.00 44.60 4.63
1586 2480 2.018542 TTCATCTTAACGGGCCGAAG 57.981 50.000 35.78 25.81 0.00 3.79
1594 2488 7.169982 GGTACTCCATGAGAATTCATCTTAACG 59.830 40.741 8.44 0.00 42.12 3.18
1621 2515 8.879342 AATAGACATCTGAATTACTGTACAGC 57.121 34.615 22.90 6.64 0.00 4.40
1627 2521 9.698309 AATCCGTAATAGACATCTGAATTACTG 57.302 33.333 10.62 6.42 34.24 2.74
1692 2589 3.577667 TCGAATACACAAACGATCGGTT 58.422 40.909 20.98 17.61 41.76 4.44
1702 2599 4.517453 CCAAAACTTCCCTCGAATACACAA 59.483 41.667 0.00 0.00 0.00 3.33
1719 2616 1.197721 CAGTGATCAGACGCCCAAAAC 59.802 52.381 0.00 0.00 0.00 2.43
1720 2617 1.202758 ACAGTGATCAGACGCCCAAAA 60.203 47.619 0.00 0.00 0.00 2.44
1722 2619 0.320683 CACAGTGATCAGACGCCCAA 60.321 55.000 0.00 0.00 0.00 4.12
1727 2624 2.997485 TCTGACACAGTGATCAGACG 57.003 50.000 22.08 7.61 45.01 4.18
1765 2670 7.065324 GGTTTCCGAACATGATAACTGTATTCA 59.935 37.037 0.00 0.00 37.51 2.57
1785 2690 3.431415 ACCTCTAATTTGCCTGGTTTCC 58.569 45.455 0.00 0.00 0.00 3.13
1820 2725 1.238439 ATCCTGGTTGTCTGTTTGCG 58.762 50.000 0.00 0.00 0.00 4.85
1828 2733 7.749126 CGAAAAATACACTAAATCCTGGTTGTC 59.251 37.037 0.00 0.00 0.00 3.18
1829 2734 7.446013 TCGAAAAATACACTAAATCCTGGTTGT 59.554 33.333 0.00 0.00 0.00 3.32
1830 2735 7.812648 TCGAAAAATACACTAAATCCTGGTTG 58.187 34.615 0.00 0.00 0.00 3.77
1831 2736 7.881232 TCTCGAAAAATACACTAAATCCTGGTT 59.119 33.333 0.00 0.00 0.00 3.67
1832 2737 7.391620 TCTCGAAAAATACACTAAATCCTGGT 58.608 34.615 0.00 0.00 0.00 4.00
1833 2738 7.843490 TCTCGAAAAATACACTAAATCCTGG 57.157 36.000 0.00 0.00 0.00 4.45
1834 2739 8.717821 TGTTCTCGAAAAATACACTAAATCCTG 58.282 33.333 0.00 0.00 0.00 3.86
1835 2740 8.842358 TGTTCTCGAAAAATACACTAAATCCT 57.158 30.769 0.00 0.00 0.00 3.24
1836 2741 9.704098 GATGTTCTCGAAAAATACACTAAATCC 57.296 33.333 0.00 0.00 0.00 3.01
1837 2742 9.704098 GGATGTTCTCGAAAAATACACTAAATC 57.296 33.333 0.00 0.00 0.00 2.17
1838 2743 9.226606 TGGATGTTCTCGAAAAATACACTAAAT 57.773 29.630 0.00 0.00 0.00 1.40
1839 2744 8.610248 TGGATGTTCTCGAAAAATACACTAAA 57.390 30.769 0.00 0.00 0.00 1.85
1840 2745 7.333423 CCTGGATGTTCTCGAAAAATACACTAA 59.667 37.037 0.00 0.00 0.00 2.24
1841 2746 6.816640 CCTGGATGTTCTCGAAAAATACACTA 59.183 38.462 0.00 0.00 0.00 2.74
1842 2747 5.643777 CCTGGATGTTCTCGAAAAATACACT 59.356 40.000 0.00 0.00 0.00 3.55
1843 2748 5.642063 TCCTGGATGTTCTCGAAAAATACAC 59.358 40.000 0.00 0.00 0.00 2.90
1844 2749 5.800296 TCCTGGATGTTCTCGAAAAATACA 58.200 37.500 0.00 0.00 0.00 2.29
1845 2750 6.927294 ATCCTGGATGTTCTCGAAAAATAC 57.073 37.500 8.75 0.00 0.00 1.89
1846 2751 7.938140 AAATCCTGGATGTTCTCGAAAAATA 57.062 32.000 10.54 0.00 0.00 1.40
1847 2752 6.840780 AAATCCTGGATGTTCTCGAAAAAT 57.159 33.333 10.54 0.00 0.00 1.82
1848 2753 6.940298 ACTAAATCCTGGATGTTCTCGAAAAA 59.060 34.615 10.54 0.00 0.00 1.94
1849 2754 6.472887 ACTAAATCCTGGATGTTCTCGAAAA 58.527 36.000 10.54 0.00 0.00 2.29
1850 2755 6.049955 ACTAAATCCTGGATGTTCTCGAAA 57.950 37.500 10.54 0.00 0.00 3.46
1851 2756 5.422331 AGACTAAATCCTGGATGTTCTCGAA 59.578 40.000 10.54 0.00 0.00 3.71
1852 2757 4.956700 AGACTAAATCCTGGATGTTCTCGA 59.043 41.667 10.54 0.00 0.00 4.04
1853 2758 5.269505 AGACTAAATCCTGGATGTTCTCG 57.730 43.478 10.54 0.00 0.00 4.04
1854 2759 7.354751 ACTAGACTAAATCCTGGATGTTCTC 57.645 40.000 10.54 2.91 0.00 2.87
1855 2760 6.325286 GGACTAGACTAAATCCTGGATGTTCT 59.675 42.308 10.54 8.04 0.00 3.01
1856 2761 6.098409 TGGACTAGACTAAATCCTGGATGTTC 59.902 42.308 10.54 0.00 32.06 3.18
1930 2835 9.557338 GCCACTTAAGTATATAGTATCGAACTG 57.443 37.037 8.04 0.00 39.39 3.16
1934 2839 9.948964 TGTAGCCACTTAAGTATATAGTATCGA 57.051 33.333 8.04 0.00 0.00 3.59
1939 2844 9.210228 ACCTTTGTAGCCACTTAAGTATATAGT 57.790 33.333 8.04 0.00 0.00 2.12
1942 2847 9.174166 CAAACCTTTGTAGCCACTTAAGTATAT 57.826 33.333 8.04 0.00 33.59 0.86
1943 2848 7.120138 GCAAACCTTTGTAGCCACTTAAGTATA 59.880 37.037 8.04 0.00 40.24 1.47
1968 2873 6.317391 GTGGCCTTCCAGATATAAGAATATGC 59.683 42.308 3.32 0.00 44.48 3.14
2001 2908 4.309950 ACCACCGTCGTCAAGGCC 62.310 66.667 0.00 0.00 0.00 5.19
2165 3073 0.107557 AAGTGAAAACGTGGACGGGT 60.108 50.000 3.93 0.00 44.95 5.28
2194 3102 1.314730 ACGACAATCCAAACACACCC 58.685 50.000 0.00 0.00 0.00 4.61
2195 3103 3.368495 GAAACGACAATCCAAACACACC 58.632 45.455 0.00 0.00 0.00 4.16
2196 3104 3.066203 AGGAAACGACAATCCAAACACAC 59.934 43.478 0.00 0.00 38.23 3.82
2197 3105 3.283751 AGGAAACGACAATCCAAACACA 58.716 40.909 0.00 0.00 38.23 3.72
2198 3106 3.982576 AGGAAACGACAATCCAAACAC 57.017 42.857 0.00 0.00 38.23 3.32
2199 3107 4.399618 TGAAAGGAAACGACAATCCAAACA 59.600 37.500 0.00 0.00 38.23 2.83
2200 3108 4.927422 TGAAAGGAAACGACAATCCAAAC 58.073 39.130 0.00 0.00 38.23 2.93
2201 3109 5.584253 TTGAAAGGAAACGACAATCCAAA 57.416 34.783 0.00 0.00 38.23 3.28
2202 3110 5.584253 TTTGAAAGGAAACGACAATCCAA 57.416 34.783 0.00 0.00 38.23 3.53
2203 3111 5.782893 ATTTGAAAGGAAACGACAATCCA 57.217 34.783 0.00 0.00 38.23 3.41
2204 3112 7.913821 GGTATATTTGAAAGGAAACGACAATCC 59.086 37.037 0.00 0.00 35.88 3.01
2205 3113 8.674607 AGGTATATTTGAAAGGAAACGACAATC 58.325 33.333 0.00 0.00 0.00 2.67
2206 3114 8.575649 AGGTATATTTGAAAGGAAACGACAAT 57.424 30.769 0.00 0.00 0.00 2.71
2207 3115 7.881232 AGAGGTATATTTGAAAGGAAACGACAA 59.119 33.333 0.00 0.00 0.00 3.18
2208 3116 7.333423 CAGAGGTATATTTGAAAGGAAACGACA 59.667 37.037 0.00 0.00 0.00 4.35
2209 3117 7.333672 ACAGAGGTATATTTGAAAGGAAACGAC 59.666 37.037 0.00 0.00 0.00 4.34
2210 3118 7.391620 ACAGAGGTATATTTGAAAGGAAACGA 58.608 34.615 0.00 0.00 0.00 3.85
2211 3119 7.611213 ACAGAGGTATATTTGAAAGGAAACG 57.389 36.000 0.00 0.00 0.00 3.60
2237 3145 2.910977 ACCCTCCGAGGTCTGTATTTTT 59.089 45.455 13.62 0.00 33.81 1.94
2238 3146 2.547990 ACCCTCCGAGGTCTGTATTTT 58.452 47.619 13.62 0.00 33.81 1.82
2239 3147 2.249309 ACCCTCCGAGGTCTGTATTT 57.751 50.000 13.62 0.00 33.81 1.40
2247 3155 1.370064 CAAAACGACCCTCCGAGGT 59.630 57.895 13.62 1.62 45.12 3.85
2248 3156 0.250166 AACAAAACGACCCTCCGAGG 60.250 55.000 7.56 7.56 34.30 4.63
2249 3157 1.529865 GAAACAAAACGACCCTCCGAG 59.470 52.381 0.00 0.00 0.00 4.63
2250 3158 1.585297 GAAACAAAACGACCCTCCGA 58.415 50.000 0.00 0.00 0.00 4.55
2251 3159 0.589708 GGAAACAAAACGACCCTCCG 59.410 55.000 0.00 0.00 0.00 4.63
2252 3160 0.589708 CGGAAACAAAACGACCCTCC 59.410 55.000 0.00 0.00 0.00 4.30
2253 3161 0.589708 CCGGAAACAAAACGACCCTC 59.410 55.000 0.00 0.00 0.00 4.30
2254 3162 1.449726 GCCGGAAACAAAACGACCCT 61.450 55.000 5.05 0.00 0.00 4.34
2255 3163 1.008194 GCCGGAAACAAAACGACCC 60.008 57.895 5.05 0.00 0.00 4.46
2256 3164 1.008194 GGCCGGAAACAAAACGACC 60.008 57.895 5.05 0.00 0.00 4.79
2257 3165 1.369568 CGGCCGGAAACAAAACGAC 60.370 57.895 20.10 0.00 0.00 4.34
2258 3166 2.544698 CCGGCCGGAAACAAAACGA 61.545 57.895 41.82 0.00 37.50 3.85
2259 3167 2.050805 CCGGCCGGAAACAAAACG 60.051 61.111 41.82 7.45 37.50 3.60
2260 3168 3.434454 TCCGGCCGGAAACAAAAC 58.566 55.556 43.93 0.00 42.05 2.43
2268 3176 2.031465 GAACAGTTTCCGGCCGGA 59.969 61.111 42.66 42.66 43.52 5.14
2269 3177 2.281208 TGAACAGTTTCCGGCCGG 60.281 61.111 39.13 39.13 0.00 6.13
2270 3178 2.966309 GCTGAACAGTTTCCGGCCG 61.966 63.158 21.04 21.04 0.00 6.13
2271 3179 2.954611 GCTGAACAGTTTCCGGCC 59.045 61.111 0.00 0.00 0.00 6.13
2272 3180 2.556287 CGCTGAACAGTTTCCGGC 59.444 61.111 0.00 0.00 0.00 6.13
2273 3181 2.966309 GCCGCTGAACAGTTTCCGG 61.966 63.158 13.07 13.07 38.75 5.14
2274 3182 2.556287 GCCGCTGAACAGTTTCCG 59.444 61.111 3.77 0.00 0.00 4.30
2275 3183 1.856265 CTGGCCGCTGAACAGTTTCC 61.856 60.000 0.00 3.36 0.00 3.13
2276 3184 1.166531 ACTGGCCGCTGAACAGTTTC 61.167 55.000 0.00 0.00 42.38 2.78
2277 3185 0.107831 TACTGGCCGCTGAACAGTTT 59.892 50.000 10.24 0.00 42.38 2.66
2278 3186 0.107831 TTACTGGCCGCTGAACAGTT 59.892 50.000 10.24 0.00 42.38 3.16
2279 3187 0.107831 TTTACTGGCCGCTGAACAGT 59.892 50.000 0.00 9.95 46.30 3.55
2280 3188 1.234821 TTTTACTGGCCGCTGAACAG 58.765 50.000 0.00 0.00 38.19 3.16
2281 3189 1.904287 ATTTTACTGGCCGCTGAACA 58.096 45.000 0.00 0.00 0.00 3.18
2282 3190 2.745281 TGTATTTTACTGGCCGCTGAAC 59.255 45.455 0.00 0.00 0.00 3.18
2283 3191 3.060736 TGTATTTTACTGGCCGCTGAA 57.939 42.857 0.00 0.00 0.00 3.02
2284 3192 2.745281 GTTGTATTTTACTGGCCGCTGA 59.255 45.455 0.00 0.00 0.00 4.26
2285 3193 2.747446 AGTTGTATTTTACTGGCCGCTG 59.253 45.455 0.00 0.00 0.00 5.18
2286 3194 2.747446 CAGTTGTATTTTACTGGCCGCT 59.253 45.455 0.00 0.00 38.44 5.52
2287 3195 2.486592 ACAGTTGTATTTTACTGGCCGC 59.513 45.455 0.00 0.00 44.68 6.53
2288 3196 5.866335 TTACAGTTGTATTTTACTGGCCG 57.134 39.130 0.00 0.00 44.68 6.13
2297 3205 9.752961 GGGTGTGTTTAATTTACAGTTGTATTT 57.247 29.630 0.00 0.00 0.00 1.40
2298 3206 8.077386 CGGGTGTGTTTAATTTACAGTTGTATT 58.923 33.333 0.00 0.00 0.00 1.89
2299 3207 7.229106 ACGGGTGTGTTTAATTTACAGTTGTAT 59.771 33.333 0.00 0.00 0.00 2.29
2300 3208 6.541641 ACGGGTGTGTTTAATTTACAGTTGTA 59.458 34.615 0.00 0.00 0.00 2.41
2301 3209 5.357596 ACGGGTGTGTTTAATTTACAGTTGT 59.642 36.000 0.00 0.00 0.00 3.32
2302 3210 5.823353 ACGGGTGTGTTTAATTTACAGTTG 58.177 37.500 0.00 0.00 0.00 3.16
2303 3211 7.748691 ATACGGGTGTGTTTAATTTACAGTT 57.251 32.000 0.00 0.00 0.00 3.16
2304 3212 7.444792 TCAATACGGGTGTGTTTAATTTACAGT 59.555 33.333 0.00 0.00 0.00 3.55
2305 3213 7.808672 TCAATACGGGTGTGTTTAATTTACAG 58.191 34.615 0.00 0.00 0.00 2.74
2306 3214 7.741027 TCAATACGGGTGTGTTTAATTTACA 57.259 32.000 0.00 0.00 0.00 2.41
2307 3215 9.628746 ATTTCAATACGGGTGTGTTTAATTTAC 57.371 29.630 0.00 0.00 0.00 2.01
2309 3217 9.628746 GTATTTCAATACGGGTGTGTTTAATTT 57.371 29.630 0.00 0.00 32.76 1.82
2310 3218 8.794553 TGTATTTCAATACGGGTGTGTTTAATT 58.205 29.630 5.44 0.00 43.24 1.40
2311 3219 8.238631 GTGTATTTCAATACGGGTGTGTTTAAT 58.761 33.333 5.44 0.00 43.24 1.40
2312 3220 7.444792 AGTGTATTTCAATACGGGTGTGTTTAA 59.555 33.333 5.44 0.00 43.24 1.52
2313 3221 6.935771 AGTGTATTTCAATACGGGTGTGTTTA 59.064 34.615 5.44 0.00 43.24 2.01
2314 3222 5.766174 AGTGTATTTCAATACGGGTGTGTTT 59.234 36.000 5.44 0.00 43.24 2.83
2315 3223 5.180492 CAGTGTATTTCAATACGGGTGTGTT 59.820 40.000 5.44 0.00 43.24 3.32
2316 3224 4.693566 CAGTGTATTTCAATACGGGTGTGT 59.306 41.667 5.44 0.00 43.24 3.72
2317 3225 4.932799 TCAGTGTATTTCAATACGGGTGTG 59.067 41.667 5.44 0.10 43.24 3.82
2318 3226 5.155278 TCAGTGTATTTCAATACGGGTGT 57.845 39.130 5.44 0.00 43.24 4.16
2319 3227 5.236478 GGATCAGTGTATTTCAATACGGGTG 59.764 44.000 5.44 3.42 43.24 4.61
2320 3228 5.365619 GGATCAGTGTATTTCAATACGGGT 58.634 41.667 5.44 0.00 43.24 5.28
2321 3229 4.755123 GGGATCAGTGTATTTCAATACGGG 59.245 45.833 5.44 0.00 43.24 5.28
2322 3230 5.364778 TGGGATCAGTGTATTTCAATACGG 58.635 41.667 5.44 0.00 43.24 4.02
2323 3231 6.511767 GCTTGGGATCAGTGTATTTCAATACG 60.512 42.308 5.44 0.00 43.24 3.06
2324 3232 6.318648 TGCTTGGGATCAGTGTATTTCAATAC 59.681 38.462 3.13 3.13 41.24 1.89
2325 3233 6.318648 GTGCTTGGGATCAGTGTATTTCAATA 59.681 38.462 0.00 0.00 0.00 1.90
2326 3234 5.126061 GTGCTTGGGATCAGTGTATTTCAAT 59.874 40.000 0.00 0.00 0.00 2.57
2327 3235 4.458989 GTGCTTGGGATCAGTGTATTTCAA 59.541 41.667 0.00 0.00 0.00 2.69
2328 3236 4.009675 GTGCTTGGGATCAGTGTATTTCA 58.990 43.478 0.00 0.00 0.00 2.69
2329 3237 3.063997 CGTGCTTGGGATCAGTGTATTTC 59.936 47.826 0.00 0.00 0.00 2.17
2330 3238 3.009723 CGTGCTTGGGATCAGTGTATTT 58.990 45.455 0.00 0.00 0.00 1.40
2331 3239 2.632377 CGTGCTTGGGATCAGTGTATT 58.368 47.619 0.00 0.00 0.00 1.89
2332 3240 1.134401 CCGTGCTTGGGATCAGTGTAT 60.134 52.381 0.00 0.00 0.00 2.29
2333 3241 0.249120 CCGTGCTTGGGATCAGTGTA 59.751 55.000 0.00 0.00 0.00 2.90
2334 3242 1.003355 CCGTGCTTGGGATCAGTGT 60.003 57.895 0.00 0.00 0.00 3.55
2335 3243 2.401766 GCCGTGCTTGGGATCAGTG 61.402 63.158 0.00 0.00 0.00 3.66
2336 3244 2.045926 GCCGTGCTTGGGATCAGT 60.046 61.111 0.00 0.00 0.00 3.41
2337 3245 2.825836 GGCCGTGCTTGGGATCAG 60.826 66.667 0.00 0.00 0.00 2.90
2338 3246 1.558167 TAAGGCCGTGCTTGGGATCA 61.558 55.000 0.00 0.00 0.00 2.92
2339 3247 0.393808 TTAAGGCCGTGCTTGGGATC 60.394 55.000 0.00 0.00 0.00 3.36
2340 3248 0.258774 ATTAAGGCCGTGCTTGGGAT 59.741 50.000 0.00 0.00 0.00 3.85
2341 3249 0.679640 CATTAAGGCCGTGCTTGGGA 60.680 55.000 0.00 0.00 0.00 4.37
2342 3250 1.666209 CCATTAAGGCCGTGCTTGGG 61.666 60.000 0.00 0.00 0.00 4.12
2343 3251 0.679640 TCCATTAAGGCCGTGCTTGG 60.680 55.000 0.00 5.76 37.29 3.61
2344 3252 1.135402 GTTCCATTAAGGCCGTGCTTG 60.135 52.381 0.00 0.00 37.29 4.01
2345 3253 1.173913 GTTCCATTAAGGCCGTGCTT 58.826 50.000 0.00 0.00 37.29 3.91
2346 3254 1.024579 CGTTCCATTAAGGCCGTGCT 61.025 55.000 0.00 0.00 37.29 4.40
2347 3255 1.427819 CGTTCCATTAAGGCCGTGC 59.572 57.895 0.00 0.00 37.29 5.34
2348 3256 1.302383 TGCGTTCCATTAAGGCCGTG 61.302 55.000 0.00 0.00 46.16 4.94
2349 3257 0.393808 ATGCGTTCCATTAAGGCCGT 60.394 50.000 0.00 0.00 46.16 5.68
2350 3258 0.029300 CATGCGTTCCATTAAGGCCG 59.971 55.000 0.00 0.00 46.16 6.13
2351 3259 1.102978 ACATGCGTTCCATTAAGGCC 58.897 50.000 0.00 0.00 46.16 5.19
2352 3260 2.094752 ACAACATGCGTTCCATTAAGGC 60.095 45.455 0.00 0.00 46.75 4.35
2353 3261 3.190327 TCACAACATGCGTTCCATTAAGG 59.810 43.478 0.00 0.00 39.47 2.69
2354 3262 4.418013 TCACAACATGCGTTCCATTAAG 57.582 40.909 0.00 0.00 31.13 1.85
2355 3263 4.217334 ACATCACAACATGCGTTCCATTAA 59.783 37.500 0.00 0.00 31.13 1.40
2356 3264 3.755905 ACATCACAACATGCGTTCCATTA 59.244 39.130 0.00 0.00 31.13 1.90
2357 3265 2.557924 ACATCACAACATGCGTTCCATT 59.442 40.909 0.00 0.00 31.13 3.16
2358 3266 2.161855 ACATCACAACATGCGTTCCAT 58.838 42.857 0.00 0.00 31.13 3.41
2359 3267 1.603456 ACATCACAACATGCGTTCCA 58.397 45.000 0.00 0.00 31.13 3.53
2360 3268 2.742053 ACTACATCACAACATGCGTTCC 59.258 45.455 0.00 0.00 31.13 3.62
2361 3269 4.625742 ACTACTACATCACAACATGCGTTC 59.374 41.667 0.00 0.00 31.13 3.95
2362 3270 4.566004 ACTACTACATCACAACATGCGTT 58.434 39.130 0.00 0.00 35.01 4.84
2363 3271 4.188247 ACTACTACATCACAACATGCGT 57.812 40.909 0.00 0.00 0.00 5.24
2364 3272 4.204370 CGTACTACTACATCACAACATGCG 59.796 45.833 0.00 0.00 0.00 4.73
2365 3273 5.100259 ACGTACTACTACATCACAACATGC 58.900 41.667 0.00 0.00 0.00 4.06
2366 3274 7.576750 AAACGTACTACTACATCACAACATG 57.423 36.000 0.00 0.00 0.00 3.21
2367 3275 9.350357 CTAAAACGTACTACTACATCACAACAT 57.650 33.333 0.00 0.00 0.00 2.71
2368 3276 7.809331 CCTAAAACGTACTACTACATCACAACA 59.191 37.037 0.00 0.00 0.00 3.33
2369 3277 7.201384 GCCTAAAACGTACTACTACATCACAAC 60.201 40.741 0.00 0.00 0.00 3.32
2370 3278 6.808212 GCCTAAAACGTACTACTACATCACAA 59.192 38.462 0.00 0.00 0.00 3.33
2371 3279 6.151648 AGCCTAAAACGTACTACTACATCACA 59.848 38.462 0.00 0.00 0.00 3.58
2372 3280 6.558909 AGCCTAAAACGTACTACTACATCAC 58.441 40.000 0.00 0.00 0.00 3.06
2373 3281 6.764308 AGCCTAAAACGTACTACTACATCA 57.236 37.500 0.00 0.00 0.00 3.07
2374 3282 7.924940 ACTAGCCTAAAACGTACTACTACATC 58.075 38.462 0.00 0.00 0.00 3.06
2375 3283 7.554118 TGACTAGCCTAAAACGTACTACTACAT 59.446 37.037 0.00 0.00 0.00 2.29
2376 3284 6.878923 TGACTAGCCTAAAACGTACTACTACA 59.121 38.462 0.00 0.00 0.00 2.74
2377 3285 7.308782 TGACTAGCCTAAAACGTACTACTAC 57.691 40.000 0.00 0.00 0.00 2.73
2378 3286 9.265901 CTATGACTAGCCTAAAACGTACTACTA 57.734 37.037 0.00 0.00 0.00 1.82
2379 3287 7.772757 ACTATGACTAGCCTAAAACGTACTACT 59.227 37.037 0.00 0.00 0.00 2.57
2380 3288 7.854916 CACTATGACTAGCCTAAAACGTACTAC 59.145 40.741 0.00 0.00 0.00 2.73
2381 3289 7.012704 CCACTATGACTAGCCTAAAACGTACTA 59.987 40.741 0.00 0.00 0.00 1.82
2382 3290 6.183360 CCACTATGACTAGCCTAAAACGTACT 60.183 42.308 0.00 0.00 0.00 2.73
2383 3291 5.975939 CCACTATGACTAGCCTAAAACGTAC 59.024 44.000 0.00 0.00 0.00 3.67
2384 3292 5.068198 CCCACTATGACTAGCCTAAAACGTA 59.932 44.000 0.00 0.00 0.00 3.57
2385 3293 4.142004 CCCACTATGACTAGCCTAAAACGT 60.142 45.833 0.00 0.00 0.00 3.99
2386 3294 4.098960 TCCCACTATGACTAGCCTAAAACG 59.901 45.833 0.00 0.00 0.00 3.60
2387 3295 5.609533 TCCCACTATGACTAGCCTAAAAC 57.390 43.478 0.00 0.00 0.00 2.43
2388 3296 6.824958 ATTCCCACTATGACTAGCCTAAAA 57.175 37.500 0.00 0.00 0.00 1.52
2389 3297 7.567622 AGTTATTCCCACTATGACTAGCCTAAA 59.432 37.037 0.00 0.00 0.00 1.85
2390 3298 7.073854 AGTTATTCCCACTATGACTAGCCTAA 58.926 38.462 0.00 0.00 0.00 2.69
2391 3299 6.621394 AGTTATTCCCACTATGACTAGCCTA 58.379 40.000 0.00 0.00 0.00 3.93
2392 3300 5.468658 AGTTATTCCCACTATGACTAGCCT 58.531 41.667 0.00 0.00 0.00 4.58
2393 3301 5.810080 AGTTATTCCCACTATGACTAGCC 57.190 43.478 0.00 0.00 0.00 3.93
2394 3302 6.869388 GCTAAGTTATTCCCACTATGACTAGC 59.131 42.308 0.00 0.00 0.00 3.42
2395 3303 8.184304 AGCTAAGTTATTCCCACTATGACTAG 57.816 38.462 0.00 0.00 0.00 2.57
2396 3304 9.298250 CTAGCTAAGTTATTCCCACTATGACTA 57.702 37.037 0.00 0.00 0.00 2.59
2397 3305 7.785506 ACTAGCTAAGTTATTCCCACTATGACT 59.214 37.037 0.00 0.00 33.35 3.41
2398 3306 7.953752 ACTAGCTAAGTTATTCCCACTATGAC 58.046 38.462 0.00 0.00 33.35 3.06
2399 3307 9.650714 TTACTAGCTAAGTTATTCCCACTATGA 57.349 33.333 0.00 0.00 39.80 2.15
2400 3308 9.694137 GTTACTAGCTAAGTTATTCCCACTATG 57.306 37.037 0.00 0.00 39.80 2.23
2401 3309 9.430399 TGTTACTAGCTAAGTTATTCCCACTAT 57.570 33.333 0.00 0.00 39.80 2.12
2402 3310 8.827832 TGTTACTAGCTAAGTTATTCCCACTA 57.172 34.615 0.00 0.00 39.80 2.74
2403 3311 7.729124 TGTTACTAGCTAAGTTATTCCCACT 57.271 36.000 0.00 0.00 39.80 4.00
2404 3312 9.694137 CTATGTTACTAGCTAAGTTATTCCCAC 57.306 37.037 0.00 0.00 39.80 4.61
2405 3313 8.365647 GCTATGTTACTAGCTAAGTTATTCCCA 58.634 37.037 0.00 0.00 40.79 4.37
2406 3314 7.541437 CGCTATGTTACTAGCTAAGTTATTCCC 59.459 40.741 0.00 0.00 41.61 3.97
2407 3315 7.062022 GCGCTATGTTACTAGCTAAGTTATTCC 59.938 40.741 0.00 0.00 41.61 3.01
2408 3316 7.594015 TGCGCTATGTTACTAGCTAAGTTATTC 59.406 37.037 9.73 0.00 41.61 1.75
2409 3317 7.381678 GTGCGCTATGTTACTAGCTAAGTTATT 59.618 37.037 9.73 0.00 41.61 1.40
2410 3318 6.862090 GTGCGCTATGTTACTAGCTAAGTTAT 59.138 38.462 9.73 0.00 41.61 1.89
2411 3319 6.039047 AGTGCGCTATGTTACTAGCTAAGTTA 59.961 38.462 9.73 0.00 41.61 2.24
2412 3320 5.041940 GTGCGCTATGTTACTAGCTAAGTT 58.958 41.667 9.73 0.00 41.61 2.66
2413 3321 4.338682 AGTGCGCTATGTTACTAGCTAAGT 59.661 41.667 9.73 0.00 41.61 2.24
2414 3322 4.861210 AGTGCGCTATGTTACTAGCTAAG 58.139 43.478 9.73 0.00 41.61 2.18
2415 3323 4.913335 AGTGCGCTATGTTACTAGCTAA 57.087 40.909 9.73 0.00 41.61 3.09
2416 3324 4.554134 CGAAGTGCGCTATGTTACTAGCTA 60.554 45.833 9.73 0.00 41.61 3.32
2417 3325 3.707793 GAAGTGCGCTATGTTACTAGCT 58.292 45.455 9.73 0.00 41.61 3.32
2418 3326 2.468040 CGAAGTGCGCTATGTTACTAGC 59.532 50.000 9.73 0.00 40.61 3.42
2419 3327 3.948851 TCGAAGTGCGCTATGTTACTAG 58.051 45.455 9.73 0.83 40.61 2.57
2420 3328 3.624410 TCTCGAAGTGCGCTATGTTACTA 59.376 43.478 9.73 0.00 40.61 1.82
2421 3329 2.422479 TCTCGAAGTGCGCTATGTTACT 59.578 45.455 9.73 0.00 40.61 2.24
2422 3330 2.793933 TCTCGAAGTGCGCTATGTTAC 58.206 47.619 9.73 0.00 40.61 2.50
2423 3331 3.497297 TTCTCGAAGTGCGCTATGTTA 57.503 42.857 9.73 0.00 40.61 2.41
2424 3332 2.363788 TTCTCGAAGTGCGCTATGTT 57.636 45.000 9.73 0.00 40.61 2.71
2425 3333 2.363788 TTTCTCGAAGTGCGCTATGT 57.636 45.000 9.73 0.00 40.61 2.29
2426 3334 3.933155 ATTTTCTCGAAGTGCGCTATG 57.067 42.857 9.73 0.00 40.61 2.23
2427 3335 4.033358 CAGAATTTTCTCGAAGTGCGCTAT 59.967 41.667 9.73 0.00 40.61 2.97
2428 3336 3.367932 CAGAATTTTCTCGAAGTGCGCTA 59.632 43.478 9.73 0.00 40.61 4.26
2429 3337 2.158449 CAGAATTTTCTCGAAGTGCGCT 59.842 45.455 9.73 0.00 40.61 5.92
2430 3338 2.499896 CAGAATTTTCTCGAAGTGCGC 58.500 47.619 0.00 0.00 40.61 6.09
2431 3339 2.158449 AGCAGAATTTTCTCGAAGTGCG 59.842 45.455 0.00 0.00 42.69 5.34
2432 3340 3.820777 AGCAGAATTTTCTCGAAGTGC 57.179 42.857 0.00 0.00 34.74 4.40
2433 3341 6.740002 CACATAAGCAGAATTTTCTCGAAGTG 59.260 38.462 0.00 0.00 34.74 3.16
2434 3342 6.650807 TCACATAAGCAGAATTTTCTCGAAGT 59.349 34.615 0.00 0.00 34.74 3.01
2435 3343 6.958193 GTCACATAAGCAGAATTTTCTCGAAG 59.042 38.462 0.00 0.00 34.74 3.79
2436 3344 6.401047 CGTCACATAAGCAGAATTTTCTCGAA 60.401 38.462 0.00 0.00 34.74 3.71
2437 3345 5.062183 CGTCACATAAGCAGAATTTTCTCGA 59.938 40.000 0.00 0.00 34.74 4.04
2438 3346 5.062183 TCGTCACATAAGCAGAATTTTCTCG 59.938 40.000 0.00 0.00 34.74 4.04
2439 3347 6.091441 ACTCGTCACATAAGCAGAATTTTCTC 59.909 38.462 0.00 0.00 34.74 2.87
2440 3348 5.934625 ACTCGTCACATAAGCAGAATTTTCT 59.065 36.000 0.00 0.00 38.25 2.52
2441 3349 6.170675 ACTCGTCACATAAGCAGAATTTTC 57.829 37.500 0.00 0.00 0.00 2.29
2442 3350 7.667043 TTACTCGTCACATAAGCAGAATTTT 57.333 32.000 0.00 0.00 0.00 1.82
2443 3351 7.849804 ATTACTCGTCACATAAGCAGAATTT 57.150 32.000 0.00 0.00 0.00 1.82
2444 3352 7.849804 AATTACTCGTCACATAAGCAGAATT 57.150 32.000 0.00 0.00 0.00 2.17
2445 3353 8.942338 TTAATTACTCGTCACATAAGCAGAAT 57.058 30.769 0.00 0.00 0.00 2.40
2446 3354 8.817100 CATTAATTACTCGTCACATAAGCAGAA 58.183 33.333 0.00 0.00 0.00 3.02
2447 3355 8.194769 TCATTAATTACTCGTCACATAAGCAGA 58.805 33.333 0.00 0.00 0.00 4.26
2448 3356 8.352752 TCATTAATTACTCGTCACATAAGCAG 57.647 34.615 0.00 0.00 0.00 4.24
2449 3357 8.194769 TCTCATTAATTACTCGTCACATAAGCA 58.805 33.333 0.00 0.00 0.00 3.91
2450 3358 8.575565 TCTCATTAATTACTCGTCACATAAGC 57.424 34.615 0.00 0.00 0.00 3.09
2451 3359 8.695284 GCTCTCATTAATTACTCGTCACATAAG 58.305 37.037 0.00 0.00 0.00 1.73
2452 3360 8.194769 TGCTCTCATTAATTACTCGTCACATAA 58.805 33.333 0.00 0.00 0.00 1.90
2453 3361 7.712797 TGCTCTCATTAATTACTCGTCACATA 58.287 34.615 0.00 0.00 0.00 2.29
2454 3362 6.573434 TGCTCTCATTAATTACTCGTCACAT 58.427 36.000 0.00 0.00 0.00 3.21
2455 3363 5.961272 TGCTCTCATTAATTACTCGTCACA 58.039 37.500 0.00 0.00 0.00 3.58
2456 3364 6.266323 TCTGCTCTCATTAATTACTCGTCAC 58.734 40.000 0.00 0.00 0.00 3.67
2457 3365 6.451064 TCTGCTCTCATTAATTACTCGTCA 57.549 37.500 0.00 0.00 0.00 4.35
2458 3366 7.142021 TGATCTGCTCTCATTAATTACTCGTC 58.858 38.462 0.00 0.00 0.00 4.20
2459 3367 7.043961 TGATCTGCTCTCATTAATTACTCGT 57.956 36.000 0.00 0.00 0.00 4.18
2460 3368 7.063191 CCATGATCTGCTCTCATTAATTACTCG 59.937 40.741 0.00 0.00 31.00 4.18
2461 3369 7.333921 CCCATGATCTGCTCTCATTAATTACTC 59.666 40.741 0.00 0.00 31.00 2.59
2462 3370 7.166851 CCCATGATCTGCTCTCATTAATTACT 58.833 38.462 0.00 0.00 31.00 2.24
2463 3371 6.373774 CCCCATGATCTGCTCTCATTAATTAC 59.626 42.308 0.00 0.00 31.00 1.89
2464 3372 6.273026 TCCCCATGATCTGCTCTCATTAATTA 59.727 38.462 0.00 0.00 31.00 1.40
2465 3373 5.074102 TCCCCATGATCTGCTCTCATTAATT 59.926 40.000 0.00 0.00 31.00 1.40
2466 3374 4.600547 TCCCCATGATCTGCTCTCATTAAT 59.399 41.667 0.00 0.00 31.00 1.40
2467 3375 3.975982 TCCCCATGATCTGCTCTCATTAA 59.024 43.478 0.00 0.00 31.00 1.40
2468 3376 3.590714 TCCCCATGATCTGCTCTCATTA 58.409 45.455 0.00 0.00 31.00 1.90
2469 3377 2.415624 TCCCCATGATCTGCTCTCATT 58.584 47.619 0.00 0.00 31.00 2.57
2470 3378 2.113807 TCCCCATGATCTGCTCTCAT 57.886 50.000 0.00 0.00 33.65 2.90
2471 3379 2.113807 ATCCCCATGATCTGCTCTCA 57.886 50.000 0.00 0.00 0.00 3.27
2472 3380 4.630644 TTTATCCCCATGATCTGCTCTC 57.369 45.455 0.00 0.00 34.76 3.20
2473 3381 5.595814 ATTTTATCCCCATGATCTGCTCT 57.404 39.130 0.00 0.00 34.76 4.09
2474 3382 7.951347 ATAATTTTATCCCCATGATCTGCTC 57.049 36.000 0.00 0.00 34.76 4.26
2475 3383 8.731591 AAATAATTTTATCCCCATGATCTGCT 57.268 30.769 0.00 0.00 34.76 4.24
2574 3482 6.755206 TGAAATCACCCACCGTTATCTATAG 58.245 40.000 0.00 0.00 0.00 1.31
2575 3483 6.734502 TGAAATCACCCACCGTTATCTATA 57.265 37.500 0.00 0.00 0.00 1.31
2680 3588 7.000472 TCCCACCAATCATTCTGAGATAATTC 59.000 38.462 0.00 0.00 0.00 2.17
2705 3613 5.014202 ACAAACCAAACCTTAGTGTCAACT 58.986 37.500 0.00 0.00 40.67 3.16
2710 3618 5.014202 AGTCAACAAACCAAACCTTAGTGT 58.986 37.500 0.00 0.00 0.00 3.55
2723 3631 4.498177 GCCTTCTCCTGAAAGTCAACAAAC 60.498 45.833 0.00 0.00 0.00 2.93
2735 3643 1.077805 TGGTACGGCCTTCTCCTGA 59.922 57.895 0.00 0.00 38.35 3.86
2738 3646 1.623542 ATGGTGGTACGGCCTTCTCC 61.624 60.000 0.00 0.00 38.35 3.71
2786 3694 3.267812 ACTTGTCAGATCCCCATGATGTT 59.732 43.478 0.00 0.00 32.41 2.71
2809 3717 2.362077 GTGGGGTATTGCAATGATGGAC 59.638 50.000 22.27 11.20 0.00 4.02
2814 3722 2.386779 CATGGTGGGGTATTGCAATGA 58.613 47.619 22.27 3.48 0.00 2.57
2895 3803 7.671819 TCATTGGGTTGGTGTGAAGAATATTTA 59.328 33.333 0.00 0.00 0.00 1.40
2932 3841 9.539825 CAGTTGATTTACTTGCTAGATACTCAT 57.460 33.333 1.04 0.00 0.00 2.90
2945 3860 9.956720 GATATAGCATTTGCAGTTGATTTACTT 57.043 29.630 5.20 0.00 45.16 2.24
2953 3868 5.530171 AGACCTGATATAGCATTTGCAGTTG 59.470 40.000 5.20 0.00 45.16 3.16
3002 3917 1.028330 ATCTCAGTGCCATTGGTGCG 61.028 55.000 4.26 0.00 0.00 5.34
3035 3950 7.398024 CCTAAGGGTTATGAAGAGATATTGGG 58.602 42.308 0.00 0.00 0.00 4.12
3051 3970 1.010917 ACCCATCTAGGCCTAAGGGTT 59.989 52.381 30.89 20.59 46.99 4.11
3065 3984 6.019748 TCCTTGATAGAGATAAGGACCCATC 58.980 44.000 0.00 0.00 43.64 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.