Multiple sequence alignment - TraesCS3D01G339300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G339300 chr3D 100.000 3019 0 0 1 3019 452415559 452418577 0.000000e+00 5576.0
1 TraesCS3D01G339300 chr3D 99.344 305 2 0 1 305 134084796 134084492 1.220000e-153 553.0
2 TraesCS3D01G339300 chr3D 99.016 305 3 0 1 305 586181622 586181926 5.690000e-152 547.0
3 TraesCS3D01G339300 chr3D 98.276 232 4 0 370 601 134084529 134084298 1.010000e-109 407.0
4 TraesCS3D01G339300 chr3D 100.000 107 0 0 302 408 452415826 452415932 6.600000e-47 198.0
5 TraesCS3D01G339300 chr3D 100.000 107 0 0 268 374 452415860 452415966 6.600000e-47 198.0
6 TraesCS3D01G339300 chr3D 90.385 52 3 2 322 373 323251646 323251597 1.940000e-07 67.6
7 TraesCS3D01G339300 chr3D 90.385 52 3 2 288 339 323251646 323251597 1.940000e-07 67.6
8 TraesCS3D01G339300 chr3D 90.385 52 3 2 322 373 571055704 571055655 1.940000e-07 67.6
9 TraesCS3D01G339300 chr3D 90.385 52 3 2 288 339 571055704 571055655 1.940000e-07 67.6
10 TraesCS3D01G339300 chr3D 91.304 46 4 0 338 383 587508382 587508337 2.510000e-06 63.9
11 TraesCS3D01G339300 chr3A 93.540 2322 116 18 708 3019 594666726 594669023 0.000000e+00 3426.0
12 TraesCS3D01G339300 chr3A 90.385 52 3 1 288 339 695672347 695672298 1.940000e-07 67.6
13 TraesCS3D01G339300 chr3B 93.157 2265 107 30 771 3019 594409858 594412090 0.000000e+00 3280.0
14 TraesCS3D01G339300 chr3B 98.276 232 4 0 370 601 224829560 224829791 1.010000e-109 407.0
15 TraesCS3D01G339300 chr7D 99.016 305 3 0 1 305 555002890 555002586 5.690000e-152 547.0
16 TraesCS3D01G339300 chr7D 98.283 233 4 0 370 602 565189162 565188930 2.800000e-110 409.0
17 TraesCS3D01G339300 chr7D 98.283 233 3 1 370 601 555002623 555002391 1.010000e-109 407.0
18 TraesCS3D01G339300 chr7D 100.000 30 0 0 644 673 65520740 65520711 4.200000e-04 56.5
19 TraesCS3D01G339300 chr6D 99.016 305 3 0 1 305 316414690 316414994 5.690000e-152 547.0
20 TraesCS3D01G339300 chr6D 90.385 52 3 2 322 373 38234038 38233989 1.940000e-07 67.6
21 TraesCS3D01G339300 chr6D 90.385 52 3 2 288 339 38234038 38233989 1.940000e-07 67.6
22 TraesCS3D01G339300 chr5D 99.016 305 3 0 1 305 372334255 372333951 5.690000e-152 547.0
23 TraesCS3D01G339300 chr5D 98.689 305 4 0 1 305 280308792 280309096 2.650000e-150 542.0
24 TraesCS3D01G339300 chr5D 98.689 305 4 0 1 305 463973298 463972994 2.650000e-150 542.0
25 TraesCS3D01G339300 chr5D 98.701 231 3 0 370 600 372333988 372333758 7.790000e-111 411.0
26 TraesCS3D01G339300 chr2D 99.016 305 3 0 1 305 17501789 17501485 5.690000e-152 547.0
27 TraesCS3D01G339300 chr2D 98.701 231 3 0 370 600 574901377 574901147 7.790000e-111 411.0
28 TraesCS3D01G339300 chr2D 98.696 230 3 0 370 599 315111436 315111665 2.800000e-110 409.0
29 TraesCS3D01G339300 chr4D 98.689 305 4 0 1 305 329672095 329672399 2.650000e-150 542.0
30 TraesCS3D01G339300 chr5B 98.276 232 4 0 370 601 704319755 704319986 1.010000e-109 407.0
31 TraesCS3D01G339300 chr1D 94.231 260 12 2 350 606 442817668 442817409 7.840000e-106 394.0
32 TraesCS3D01G339300 chr1D 86.885 61 5 2 316 373 442817668 442817608 6.990000e-07 65.8
33 TraesCS3D01G339300 chr1D 86.885 61 5 2 282 339 442817668 442817608 6.990000e-07 65.8
34 TraesCS3D01G339300 chr4B 91.803 61 4 1 642 702 663103819 663103760 1.930000e-12 84.2
35 TraesCS3D01G339300 chr6A 88.333 60 4 3 646 705 4046367 4046423 5.400000e-08 69.4
36 TraesCS3D01G339300 chr1B 90.385 52 3 2 288 339 666308963 666309012 1.940000e-07 67.6
37 TraesCS3D01G339300 chr1B 90.385 52 3 2 322 373 666308963 666309012 1.940000e-07 67.6
38 TraesCS3D01G339300 chr7A 85.484 62 7 2 288 349 719984271 719984330 2.510000e-06 63.9
39 TraesCS3D01G339300 chr7A 85.484 62 7 2 322 383 719984271 719984330 2.510000e-06 63.9
40 TraesCS3D01G339300 chr5A 89.583 48 4 1 336 383 17316755 17316709 3.250000e-05 60.2
41 TraesCS3D01G339300 chr5A 89.583 48 4 1 336 383 17336437 17336391 3.250000e-05 60.2
42 TraesCS3D01G339300 chr5A 89.362 47 3 2 322 368 26929836 26929880 1.170000e-04 58.4
43 TraesCS3D01G339300 chr4A 88.000 50 6 0 338 387 584429163 584429114 3.250000e-05 60.2
44 TraesCS3D01G339300 chr7B 88.889 45 5 0 339 383 115466637 115466681 4.200000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G339300 chr3D 452415559 452418577 3018 False 1990.666667 5576 100.000 1 3019 3 chr3D.!!$F2 3018
1 TraesCS3D01G339300 chr3A 594666726 594669023 2297 False 3426.000000 3426 93.540 708 3019 1 chr3A.!!$F1 2311
2 TraesCS3D01G339300 chr3B 594409858 594412090 2232 False 3280.000000 3280 93.157 771 3019 1 chr3B.!!$F2 2248

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
26 27 0.034059 AGGACTTCAAGCTGTGTCGG 59.966 55.0 0.00 0.00 0.00 4.79 F
160 161 0.036010 CTGGACCGAGCAAGGTTGAT 60.036 55.0 4.58 0.00 46.09 2.57 F
490 491 0.037139 TTGCTTAGACGGCGGCTTTA 60.037 50.0 25.39 9.12 0.00 1.85 F
1151 1160 0.038744 CATTTGGGCTCCACCAGAGT 59.961 55.0 0.00 0.00 45.21 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1068 1076 0.603065 GCTTGATCGGCTGGGTTTTT 59.397 50.0 0.00 0.00 0.00 1.94 R
1079 1087 0.820482 TCATGGCCATGGCTTGATCG 60.820 55.0 38.81 15.79 37.36 3.69 R
1554 1568 0.983378 ACTGAGGGTATGGACAGGGC 60.983 60.0 0.00 0.00 35.08 5.19 R
2936 2959 0.175073 AACCTCGGCCTATCGACAAC 59.825 55.0 0.00 0.00 35.18 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.734655 TCCTCCAAGGACTTCAAGCT 58.265 50.000 0.00 0.00 40.06 3.74
20 21 1.349026 TCCTCCAAGGACTTCAAGCTG 59.651 52.381 0.00 0.00 40.06 4.24
21 22 1.072965 CCTCCAAGGACTTCAAGCTGT 59.927 52.381 0.00 0.00 37.67 4.40
22 23 2.149578 CTCCAAGGACTTCAAGCTGTG 58.850 52.381 0.00 0.00 0.00 3.66
23 24 1.490490 TCCAAGGACTTCAAGCTGTGT 59.510 47.619 0.00 0.00 0.00 3.72
24 25 1.876156 CCAAGGACTTCAAGCTGTGTC 59.124 52.381 0.00 0.00 0.00 3.67
25 26 1.528586 CAAGGACTTCAAGCTGTGTCG 59.471 52.381 0.00 0.00 0.00 4.35
26 27 0.034059 AGGACTTCAAGCTGTGTCGG 59.966 55.000 0.00 0.00 0.00 4.79
27 28 1.569479 GGACTTCAAGCTGTGTCGGC 61.569 60.000 0.00 0.00 35.73 5.54
29 30 0.882042 ACTTCAAGCTGTGTCGGCTG 60.882 55.000 3.78 0.00 46.32 4.85
30 31 1.572085 CTTCAAGCTGTGTCGGCTGG 61.572 60.000 3.78 1.29 46.32 4.85
31 32 2.281070 CAAGCTGTGTCGGCTGGT 60.281 61.111 3.78 0.00 46.32 4.00
32 33 2.281070 AAGCTGTGTCGGCTGGTG 60.281 61.111 3.78 0.00 46.32 4.17
33 34 3.832237 AAGCTGTGTCGGCTGGTGG 62.832 63.158 3.78 0.00 46.32 4.61
34 35 4.626081 GCTGTGTCGGCTGGTGGT 62.626 66.667 0.00 0.00 32.24 4.16
35 36 3.056458 CTGTGTCGGCTGGTGGTA 58.944 61.111 0.00 0.00 0.00 3.25
36 37 1.374252 CTGTGTCGGCTGGTGGTAC 60.374 63.158 0.00 0.00 0.00 3.34
37 38 1.816863 CTGTGTCGGCTGGTGGTACT 61.817 60.000 0.00 0.00 0.00 2.73
38 39 1.370064 GTGTCGGCTGGTGGTACTT 59.630 57.895 0.00 0.00 0.00 2.24
39 40 0.949105 GTGTCGGCTGGTGGTACTTG 60.949 60.000 0.00 0.00 0.00 3.16
40 41 1.375523 GTCGGCTGGTGGTACTTGG 60.376 63.158 0.00 0.00 0.00 3.61
41 42 2.746277 CGGCTGGTGGTACTTGGC 60.746 66.667 0.00 0.00 0.00 4.52
42 43 2.434331 GGCTGGTGGTACTTGGCA 59.566 61.111 0.00 0.00 0.00 4.92
43 44 1.675641 GGCTGGTGGTACTTGGCAG 60.676 63.158 0.00 0.00 0.00 4.85
44 45 2.335712 GCTGGTGGTACTTGGCAGC 61.336 63.158 0.00 0.00 0.00 5.25
45 46 1.073025 CTGGTGGTACTTGGCAGCA 59.927 57.895 0.00 0.00 0.00 4.41
46 47 0.322816 CTGGTGGTACTTGGCAGCAT 60.323 55.000 0.00 0.00 0.00 3.79
47 48 0.608856 TGGTGGTACTTGGCAGCATG 60.609 55.000 0.00 0.00 40.87 4.06
48 49 1.315257 GGTGGTACTTGGCAGCATGG 61.315 60.000 0.00 0.00 35.86 3.66
60 61 2.125147 GCATGGCGCTGAGGTGTA 60.125 61.111 7.64 0.00 37.77 2.90
61 62 1.524621 GCATGGCGCTGAGGTGTAT 60.525 57.895 7.64 0.00 37.77 2.29
62 63 1.502163 GCATGGCGCTGAGGTGTATC 61.502 60.000 7.64 0.00 37.77 2.24
63 64 0.179076 CATGGCGCTGAGGTGTATCA 60.179 55.000 7.64 0.00 0.00 2.15
65 66 1.257750 TGGCGCTGAGGTGTATCAGT 61.258 55.000 7.64 0.00 46.93 3.41
68 69 3.071580 GCTGAGGTGTATCAGTGGC 57.928 57.895 5.69 0.00 46.93 5.01
69 70 0.807667 GCTGAGGTGTATCAGTGGCG 60.808 60.000 5.69 0.00 46.93 5.69
70 71 0.817654 CTGAGGTGTATCAGTGGCGA 59.182 55.000 0.00 0.00 41.52 5.54
71 72 0.530744 TGAGGTGTATCAGTGGCGAC 59.469 55.000 0.00 0.00 0.00 5.19
72 73 0.179108 GAGGTGTATCAGTGGCGACC 60.179 60.000 0.00 0.00 0.00 4.79
73 74 1.518572 GGTGTATCAGTGGCGACCG 60.519 63.158 0.00 0.00 0.00 4.79
74 75 2.165301 GTGTATCAGTGGCGACCGC 61.165 63.158 5.75 5.75 41.06 5.68
75 76 2.954868 GTATCAGTGGCGACCGCG 60.955 66.667 8.36 0.00 43.06 6.46
76 77 3.135457 TATCAGTGGCGACCGCGA 61.135 61.111 8.23 1.16 43.06 5.87
85 86 3.458579 CGACCGCGACGTGTTCAG 61.459 66.667 8.23 0.00 40.82 3.02
86 87 3.764049 GACCGCGACGTGTTCAGC 61.764 66.667 8.23 0.00 0.00 4.26
87 88 4.280494 ACCGCGACGTGTTCAGCT 62.280 61.111 8.23 0.00 0.00 4.24
88 89 3.767230 CCGCGACGTGTTCAGCTG 61.767 66.667 8.23 7.63 0.00 4.24
89 90 3.030308 CGCGACGTGTTCAGCTGT 61.030 61.111 14.67 0.00 0.00 4.40
90 91 2.585869 CGCGACGTGTTCAGCTGTT 61.586 57.895 14.67 0.00 0.00 3.16
91 92 1.641677 GCGACGTGTTCAGCTGTTT 59.358 52.632 14.67 0.00 0.00 2.83
92 93 0.654472 GCGACGTGTTCAGCTGTTTG 60.654 55.000 14.67 3.27 0.00 2.93
93 94 0.654472 CGACGTGTTCAGCTGTTTGC 60.654 55.000 14.67 3.30 43.29 3.68
103 104 4.093952 CTGTTTGCGCGCAGGGAG 62.094 66.667 34.25 24.52 46.37 4.30
114 115 3.322466 CAGGGAGGAGGTGCCGTT 61.322 66.667 0.00 0.00 43.04 4.44
115 116 3.322466 AGGGAGGAGGTGCCGTTG 61.322 66.667 0.00 0.00 43.04 4.10
116 117 4.410400 GGGAGGAGGTGCCGTTGG 62.410 72.222 0.00 0.00 43.43 3.77
117 118 4.410400 GGAGGAGGTGCCGTTGGG 62.410 72.222 0.00 0.00 43.43 4.12
137 138 4.429212 CCATGGTGGCGTCGACGA 62.429 66.667 39.74 20.20 43.02 4.20
138 139 2.202743 CATGGTGGCGTCGACGAT 60.203 61.111 39.74 21.58 43.02 3.73
139 140 1.065109 CATGGTGGCGTCGACGATA 59.935 57.895 39.74 24.35 43.02 2.92
140 141 0.934901 CATGGTGGCGTCGACGATAG 60.935 60.000 39.74 17.46 43.02 2.08
141 142 2.654404 GGTGGCGTCGACGATAGC 60.654 66.667 39.74 29.51 43.02 2.97
142 143 2.408022 GTGGCGTCGACGATAGCT 59.592 61.111 39.74 0.00 43.02 3.32
143 144 1.939785 GTGGCGTCGACGATAGCTG 60.940 63.158 39.74 11.11 43.02 4.24
144 145 2.353607 GGCGTCGACGATAGCTGG 60.354 66.667 39.74 10.32 43.02 4.85
145 146 2.713770 GCGTCGACGATAGCTGGA 59.286 61.111 39.74 0.00 43.02 3.86
146 147 1.654743 GCGTCGACGATAGCTGGAC 60.655 63.158 39.74 15.89 43.02 4.02
147 148 1.009900 CGTCGACGATAGCTGGACC 60.010 63.158 33.35 0.00 43.02 4.46
148 149 1.009900 GTCGACGATAGCTGGACCG 60.010 63.158 0.00 0.00 42.67 4.79
149 150 1.153309 TCGACGATAGCTGGACCGA 60.153 57.895 0.00 0.00 42.67 4.69
150 151 1.158484 TCGACGATAGCTGGACCGAG 61.158 60.000 0.00 0.00 42.67 4.63
151 152 1.008309 GACGATAGCTGGACCGAGC 60.008 63.158 0.00 7.59 42.67 5.03
152 153 1.725557 GACGATAGCTGGACCGAGCA 61.726 60.000 15.46 5.19 41.83 4.26
153 154 1.320344 ACGATAGCTGGACCGAGCAA 61.320 55.000 15.46 0.00 41.83 3.91
154 155 0.596083 CGATAGCTGGACCGAGCAAG 60.596 60.000 15.46 0.00 41.83 4.01
155 156 0.249657 GATAGCTGGACCGAGCAAGG 60.250 60.000 15.46 0.00 41.83 3.61
157 158 1.192146 TAGCTGGACCGAGCAAGGTT 61.192 55.000 15.46 1.08 46.09 3.50
158 159 2.328099 GCTGGACCGAGCAAGGTTG 61.328 63.158 4.58 0.97 46.09 3.77
159 160 1.371183 CTGGACCGAGCAAGGTTGA 59.629 57.895 4.58 0.00 46.09 3.18
160 161 0.036010 CTGGACCGAGCAAGGTTGAT 60.036 55.000 4.58 0.00 46.09 2.57
161 162 0.321564 TGGACCGAGCAAGGTTGATG 60.322 55.000 4.58 0.00 46.09 3.07
162 163 1.648467 GGACCGAGCAAGGTTGATGC 61.648 60.000 4.58 0.00 46.09 3.91
163 164 0.955428 GACCGAGCAAGGTTGATGCA 60.955 55.000 4.58 0.00 46.09 3.96
164 165 0.322816 ACCGAGCAAGGTTGATGCAT 60.323 50.000 0.00 0.00 46.22 3.96
165 166 0.379669 CCGAGCAAGGTTGATGCATC 59.620 55.000 20.14 20.14 46.22 3.91
166 167 1.089112 CGAGCAAGGTTGATGCATCA 58.911 50.000 25.42 25.42 46.22 3.07
167 168 1.063616 CGAGCAAGGTTGATGCATCAG 59.936 52.381 27.25 17.31 46.22 2.90
168 169 2.089980 GAGCAAGGTTGATGCATCAGT 58.910 47.619 27.25 14.71 46.22 3.41
169 170 3.273434 GAGCAAGGTTGATGCATCAGTA 58.727 45.455 27.25 13.01 46.22 2.74
170 171 3.012518 AGCAAGGTTGATGCATCAGTAC 58.987 45.455 27.25 22.85 46.22 2.73
171 172 2.749076 GCAAGGTTGATGCATCAGTACA 59.251 45.455 27.25 11.89 43.29 2.90
172 173 3.181503 GCAAGGTTGATGCATCAGTACAG 60.182 47.826 27.25 19.16 43.29 2.74
173 174 3.988976 AGGTTGATGCATCAGTACAGT 57.011 42.857 27.25 13.13 38.19 3.55
174 175 4.292186 AGGTTGATGCATCAGTACAGTT 57.708 40.909 27.25 11.67 38.19 3.16
175 176 4.256920 AGGTTGATGCATCAGTACAGTTC 58.743 43.478 27.25 12.07 38.19 3.01
176 177 4.019860 AGGTTGATGCATCAGTACAGTTCT 60.020 41.667 27.25 13.87 38.19 3.01
177 178 4.093998 GGTTGATGCATCAGTACAGTTCTG 59.906 45.833 27.25 0.70 38.19 3.02
178 179 4.806640 TGATGCATCAGTACAGTTCTGA 57.193 40.909 25.42 11.91 44.37 3.27
179 180 5.151297 TGATGCATCAGTACAGTTCTGAA 57.849 39.130 25.42 0.00 43.65 3.02
180 181 5.173664 TGATGCATCAGTACAGTTCTGAAG 58.826 41.667 25.42 10.42 43.65 3.02
181 182 4.871933 TGCATCAGTACAGTTCTGAAGA 57.128 40.909 13.36 0.00 43.65 2.87
182 183 5.411831 TGCATCAGTACAGTTCTGAAGAT 57.588 39.130 13.36 0.00 43.65 2.40
183 184 5.173664 TGCATCAGTACAGTTCTGAAGATG 58.826 41.667 13.36 8.91 43.65 2.90
184 185 4.569966 GCATCAGTACAGTTCTGAAGATGG 59.430 45.833 13.36 3.74 43.65 3.51
185 186 5.625426 GCATCAGTACAGTTCTGAAGATGGA 60.625 44.000 13.36 0.97 43.65 3.41
186 187 5.651387 TCAGTACAGTTCTGAAGATGGAG 57.349 43.478 7.40 0.00 38.71 3.86
187 188 4.081972 TCAGTACAGTTCTGAAGATGGAGC 60.082 45.833 7.40 0.00 38.71 4.70
188 189 2.376808 ACAGTTCTGAAGATGGAGCG 57.623 50.000 6.83 0.00 0.00 5.03
189 190 1.066573 ACAGTTCTGAAGATGGAGCGG 60.067 52.381 6.83 0.00 0.00 5.52
190 191 1.066573 CAGTTCTGAAGATGGAGCGGT 60.067 52.381 0.00 0.00 0.00 5.68
191 192 1.066573 AGTTCTGAAGATGGAGCGGTG 60.067 52.381 0.00 0.00 0.00 4.94
192 193 0.250234 TTCTGAAGATGGAGCGGTGG 59.750 55.000 0.00 0.00 0.00 4.61
193 194 1.817099 CTGAAGATGGAGCGGTGGC 60.817 63.158 0.00 0.00 40.37 5.01
194 195 2.268920 GAAGATGGAGCGGTGGCA 59.731 61.111 0.00 0.00 43.41 4.92
195 196 1.817099 GAAGATGGAGCGGTGGCAG 60.817 63.158 0.00 0.00 43.41 4.85
196 197 2.527951 GAAGATGGAGCGGTGGCAGT 62.528 60.000 0.00 0.00 43.41 4.40
197 198 2.045926 GATGGAGCGGTGGCAGTT 60.046 61.111 0.00 0.00 43.41 3.16
198 199 2.360350 ATGGAGCGGTGGCAGTTG 60.360 61.111 0.00 0.00 43.41 3.16
199 200 3.925630 ATGGAGCGGTGGCAGTTGG 62.926 63.158 0.00 0.00 43.41 3.77
221 222 4.828925 GGCGGCCTCTGAGAGCAC 62.829 72.222 12.87 0.00 0.00 4.40
224 225 4.828925 GGCCTCTGAGAGCACGCC 62.829 72.222 11.55 11.55 30.17 5.68
226 227 4.504916 CCTCTGAGAGCACGCCGG 62.505 72.222 6.17 0.00 0.00 6.13
227 228 3.443925 CTCTGAGAGCACGCCGGA 61.444 66.667 5.05 0.00 0.00 5.14
228 229 3.691744 CTCTGAGAGCACGCCGGAC 62.692 68.421 5.05 0.00 0.00 4.79
229 230 4.803426 CTGAGAGCACGCCGGACC 62.803 72.222 5.05 0.00 0.00 4.46
231 232 4.803426 GAGAGCACGCCGGACCAG 62.803 72.222 5.05 0.00 0.00 4.00
236 237 4.602259 CACGCCGGACCAGTGTGT 62.602 66.667 5.05 0.13 40.14 3.72
237 238 4.602259 ACGCCGGACCAGTGTGTG 62.602 66.667 5.05 0.00 0.00 3.82
238 239 4.602259 CGCCGGACCAGTGTGTGT 62.602 66.667 5.05 0.00 0.00 3.72
239 240 2.665185 GCCGGACCAGTGTGTGTC 60.665 66.667 5.05 0.00 0.00 3.67
240 241 2.030562 CCGGACCAGTGTGTGTCC 59.969 66.667 0.00 6.91 46.15 4.02
241 242 2.030562 CGGACCAGTGTGTGTCCC 59.969 66.667 10.42 0.00 46.78 4.46
242 243 2.802724 CGGACCAGTGTGTGTCCCA 61.803 63.158 10.42 0.00 46.78 4.37
243 244 1.071471 GGACCAGTGTGTGTCCCAG 59.929 63.158 5.91 0.00 44.32 4.45
244 245 1.407656 GGACCAGTGTGTGTCCCAGA 61.408 60.000 5.91 0.00 44.32 3.86
245 246 0.249911 GACCAGTGTGTGTCCCAGAC 60.250 60.000 0.00 0.00 37.60 3.51
246 247 1.071471 CCAGTGTGTGTCCCAGACC 59.929 63.158 0.00 0.00 38.07 3.85
247 248 1.071471 CAGTGTGTGTCCCAGACCC 59.929 63.158 0.00 0.00 38.07 4.46
248 249 2.030562 GTGTGTGTCCCAGACCCG 59.969 66.667 0.00 0.00 31.28 5.28
249 250 3.238497 TGTGTGTCCCAGACCCGG 61.238 66.667 0.00 0.00 0.00 5.73
250 251 4.699522 GTGTGTCCCAGACCCGGC 62.700 72.222 0.00 0.00 0.00 6.13
252 253 3.948719 GTGTCCCAGACCCGGCAA 61.949 66.667 0.00 0.00 0.00 4.52
253 254 3.636231 TGTCCCAGACCCGGCAAG 61.636 66.667 0.00 0.00 0.00 4.01
254 255 3.637273 GTCCCAGACCCGGCAAGT 61.637 66.667 0.00 0.00 0.00 3.16
255 256 3.636231 TCCCAGACCCGGCAAGTG 61.636 66.667 0.00 0.00 0.00 3.16
256 257 4.722700 CCCAGACCCGGCAAGTGG 62.723 72.222 0.00 0.00 0.00 4.00
258 259 4.335647 CAGACCCGGCAAGTGGCT 62.336 66.667 0.00 0.00 44.01 4.75
259 260 2.606519 AGACCCGGCAAGTGGCTA 60.607 61.111 0.00 0.00 44.01 3.93
260 261 2.125106 GACCCGGCAAGTGGCTAG 60.125 66.667 0.00 0.00 44.01 3.42
261 262 3.682292 GACCCGGCAAGTGGCTAGG 62.682 68.421 0.00 6.31 44.01 3.02
262 263 3.717294 CCCGGCAAGTGGCTAGGT 61.717 66.667 0.00 0.00 44.01 3.08
263 264 2.351276 CCGGCAAGTGGCTAGGTT 59.649 61.111 3.18 0.00 44.01 3.50
264 265 2.040544 CCGGCAAGTGGCTAGGTTG 61.041 63.158 3.18 0.00 44.01 3.77
265 266 2.040544 CGGCAAGTGGCTAGGTTGG 61.041 63.158 3.18 0.00 44.01 3.77
266 267 1.678970 GGCAAGTGGCTAGGTTGGG 60.679 63.158 0.00 0.00 44.01 4.12
267 268 1.678970 GCAAGTGGCTAGGTTGGGG 60.679 63.158 0.00 0.00 40.25 4.96
268 269 1.767692 CAAGTGGCTAGGTTGGGGT 59.232 57.895 0.00 0.00 0.00 4.95
269 270 0.322546 CAAGTGGCTAGGTTGGGGTC 60.323 60.000 0.00 0.00 0.00 4.46
270 271 0.475828 AAGTGGCTAGGTTGGGGTCT 60.476 55.000 0.00 0.00 0.00 3.85
271 272 0.910088 AGTGGCTAGGTTGGGGTCTC 60.910 60.000 0.00 0.00 0.00 3.36
272 273 1.987855 TGGCTAGGTTGGGGTCTCG 60.988 63.158 0.00 0.00 0.00 4.04
273 274 2.732619 GGCTAGGTTGGGGTCTCGG 61.733 68.421 0.00 0.00 0.00 4.63
274 275 2.732619 GCTAGGTTGGGGTCTCGGG 61.733 68.421 0.00 0.00 0.00 5.14
275 276 1.305887 CTAGGTTGGGGTCTCGGGT 60.306 63.158 0.00 0.00 0.00 5.28
276 277 1.305549 TAGGTTGGGGTCTCGGGTC 60.306 63.158 0.00 0.00 0.00 4.46
277 278 1.807771 TAGGTTGGGGTCTCGGGTCT 61.808 60.000 0.00 0.00 0.00 3.85
278 279 2.222013 GGTTGGGGTCTCGGGTCTT 61.222 63.158 0.00 0.00 0.00 3.01
279 280 0.906282 GGTTGGGGTCTCGGGTCTTA 60.906 60.000 0.00 0.00 0.00 2.10
280 281 0.535797 GTTGGGGTCTCGGGTCTTAG 59.464 60.000 0.00 0.00 0.00 2.18
281 282 0.410663 TTGGGGTCTCGGGTCTTAGA 59.589 55.000 0.00 0.00 0.00 2.10
282 283 0.635009 TGGGGTCTCGGGTCTTAGAT 59.365 55.000 0.00 0.00 0.00 1.98
283 284 1.041437 GGGGTCTCGGGTCTTAGATG 58.959 60.000 0.00 0.00 0.00 2.90
284 285 1.688627 GGGGTCTCGGGTCTTAGATGT 60.689 57.143 0.00 0.00 0.00 3.06
285 286 2.108970 GGGTCTCGGGTCTTAGATGTT 58.891 52.381 0.00 0.00 0.00 2.71
286 287 3.294214 GGGTCTCGGGTCTTAGATGTTA 58.706 50.000 0.00 0.00 0.00 2.41
287 288 3.318557 GGGTCTCGGGTCTTAGATGTTAG 59.681 52.174 0.00 0.00 0.00 2.34
288 289 3.318557 GGTCTCGGGTCTTAGATGTTAGG 59.681 52.174 0.00 0.00 0.00 2.69
289 290 2.957006 TCTCGGGTCTTAGATGTTAGGC 59.043 50.000 0.00 0.00 0.00 3.93
290 291 2.959707 CTCGGGTCTTAGATGTTAGGCT 59.040 50.000 0.00 0.00 0.00 4.58
291 292 3.371965 TCGGGTCTTAGATGTTAGGCTT 58.628 45.455 0.00 0.00 0.00 4.35
292 293 3.132289 TCGGGTCTTAGATGTTAGGCTTG 59.868 47.826 0.00 0.00 0.00 4.01
293 294 3.741388 CGGGTCTTAGATGTTAGGCTTGG 60.741 52.174 0.00 0.00 0.00 3.61
294 295 3.206964 GGTCTTAGATGTTAGGCTTGGC 58.793 50.000 0.00 0.00 0.00 4.52
295 296 3.118223 GGTCTTAGATGTTAGGCTTGGCT 60.118 47.826 0.00 1.64 0.00 4.75
296 297 3.873952 GTCTTAGATGTTAGGCTTGGCTG 59.126 47.826 6.97 0.00 0.00 4.85
297 298 2.332063 TAGATGTTAGGCTTGGCTGC 57.668 50.000 6.97 0.00 0.00 5.25
298 299 0.745845 AGATGTTAGGCTTGGCTGCG 60.746 55.000 6.97 0.00 0.00 5.18
299 300 0.744414 GATGTTAGGCTTGGCTGCGA 60.744 55.000 6.97 0.00 0.00 5.10
300 301 0.107017 ATGTTAGGCTTGGCTGCGAT 60.107 50.000 6.97 0.00 0.00 4.58
301 302 1.026182 TGTTAGGCTTGGCTGCGATG 61.026 55.000 6.97 0.00 0.00 3.84
302 303 1.026718 GTTAGGCTTGGCTGCGATGT 61.027 55.000 6.97 0.00 0.00 3.06
303 304 0.744414 TTAGGCTTGGCTGCGATGTC 60.744 55.000 6.97 0.00 0.00 3.06
304 305 1.617018 TAGGCTTGGCTGCGATGTCT 61.617 55.000 9.40 9.40 0.00 3.41
305 306 2.467826 GGCTTGGCTGCGATGTCTC 61.468 63.158 0.00 0.00 0.00 3.36
307 308 2.125552 TTGGCTGCGATGTCTCGG 60.126 61.111 0.00 0.00 45.15 4.63
308 309 3.664025 TTGGCTGCGATGTCTCGGG 62.664 63.158 0.00 0.00 45.15 5.14
309 310 4.148825 GGCTGCGATGTCTCGGGT 62.149 66.667 0.00 0.00 45.15 5.28
310 311 2.583593 GCTGCGATGTCTCGGGTC 60.584 66.667 0.00 0.00 45.15 4.46
311 312 3.069980 GCTGCGATGTCTCGGGTCT 62.070 63.158 0.00 0.00 45.15 3.85
312 313 1.513158 CTGCGATGTCTCGGGTCTT 59.487 57.895 0.00 0.00 45.15 3.01
313 314 0.738975 CTGCGATGTCTCGGGTCTTA 59.261 55.000 0.00 0.00 45.15 2.10
314 315 0.738975 TGCGATGTCTCGGGTCTTAG 59.261 55.000 0.00 0.00 45.15 2.18
315 316 1.022735 GCGATGTCTCGGGTCTTAGA 58.977 55.000 0.00 0.00 45.15 2.10
316 317 1.609555 GCGATGTCTCGGGTCTTAGAT 59.390 52.381 0.00 0.00 45.15 1.98
317 318 2.605823 GCGATGTCTCGGGTCTTAGATG 60.606 54.545 0.00 0.00 45.15 2.90
318 319 2.619177 CGATGTCTCGGGTCTTAGATGT 59.381 50.000 0.00 0.00 41.27 3.06
319 320 3.066900 CGATGTCTCGGGTCTTAGATGTT 59.933 47.826 0.00 0.00 41.27 2.71
320 321 4.275196 CGATGTCTCGGGTCTTAGATGTTA 59.725 45.833 0.00 0.00 41.27 2.41
321 322 5.561145 CGATGTCTCGGGTCTTAGATGTTAG 60.561 48.000 0.00 0.00 41.27 2.34
322 323 3.952323 TGTCTCGGGTCTTAGATGTTAGG 59.048 47.826 0.00 0.00 0.00 2.69
323 324 2.957006 TCTCGGGTCTTAGATGTTAGGC 59.043 50.000 0.00 0.00 0.00 3.93
324 325 2.959707 CTCGGGTCTTAGATGTTAGGCT 59.040 50.000 0.00 0.00 0.00 4.58
325 326 3.371965 TCGGGTCTTAGATGTTAGGCTT 58.628 45.455 0.00 0.00 0.00 4.35
326 327 3.132289 TCGGGTCTTAGATGTTAGGCTTG 59.868 47.826 0.00 0.00 0.00 4.01
327 328 3.741388 CGGGTCTTAGATGTTAGGCTTGG 60.741 52.174 0.00 0.00 0.00 3.61
328 329 3.206964 GGTCTTAGATGTTAGGCTTGGC 58.793 50.000 0.00 0.00 0.00 4.52
329 330 3.118223 GGTCTTAGATGTTAGGCTTGGCT 60.118 47.826 0.00 1.64 0.00 4.75
330 331 3.873952 GTCTTAGATGTTAGGCTTGGCTG 59.126 47.826 6.97 0.00 0.00 4.85
331 332 2.332063 TAGATGTTAGGCTTGGCTGC 57.668 50.000 6.97 0.00 0.00 5.25
332 333 0.745845 AGATGTTAGGCTTGGCTGCG 60.746 55.000 6.97 0.00 0.00 5.18
333 334 0.744414 GATGTTAGGCTTGGCTGCGA 60.744 55.000 6.97 0.00 0.00 5.10
334 335 0.107017 ATGTTAGGCTTGGCTGCGAT 60.107 50.000 6.97 0.00 0.00 4.58
335 336 1.026182 TGTTAGGCTTGGCTGCGATG 61.026 55.000 6.97 0.00 0.00 3.84
336 337 1.026718 GTTAGGCTTGGCTGCGATGT 61.027 55.000 6.97 0.00 0.00 3.06
337 338 0.744414 TTAGGCTTGGCTGCGATGTC 60.744 55.000 6.97 0.00 0.00 3.06
338 339 1.617018 TAGGCTTGGCTGCGATGTCT 61.617 55.000 9.40 9.40 0.00 3.41
339 340 2.467826 GGCTTGGCTGCGATGTCTC 61.468 63.158 0.00 0.00 0.00 3.36
341 342 2.125552 TTGGCTGCGATGTCTCGG 60.126 61.111 0.00 0.00 45.15 4.63
342 343 3.664025 TTGGCTGCGATGTCTCGGG 62.664 63.158 0.00 0.00 45.15 5.14
343 344 4.148825 GGCTGCGATGTCTCGGGT 62.149 66.667 0.00 0.00 45.15 5.28
344 345 2.583593 GCTGCGATGTCTCGGGTC 60.584 66.667 0.00 0.00 45.15 4.46
345 346 3.069980 GCTGCGATGTCTCGGGTCT 62.070 63.158 0.00 0.00 45.15 3.85
346 347 1.513158 CTGCGATGTCTCGGGTCTT 59.487 57.895 0.00 0.00 45.15 3.01
347 348 0.738975 CTGCGATGTCTCGGGTCTTA 59.261 55.000 0.00 0.00 45.15 2.10
348 349 0.738975 TGCGATGTCTCGGGTCTTAG 59.261 55.000 0.00 0.00 45.15 2.18
349 350 1.022735 GCGATGTCTCGGGTCTTAGA 58.977 55.000 0.00 0.00 45.15 2.10
350 351 1.609555 GCGATGTCTCGGGTCTTAGAT 59.390 52.381 0.00 0.00 45.15 1.98
351 352 2.605823 GCGATGTCTCGGGTCTTAGATG 60.606 54.545 0.00 0.00 45.15 2.90
352 353 2.619177 CGATGTCTCGGGTCTTAGATGT 59.381 50.000 0.00 0.00 41.27 3.06
353 354 3.066900 CGATGTCTCGGGTCTTAGATGTT 59.933 47.826 0.00 0.00 41.27 2.71
354 355 4.275196 CGATGTCTCGGGTCTTAGATGTTA 59.725 45.833 0.00 0.00 41.27 2.41
355 356 5.561145 CGATGTCTCGGGTCTTAGATGTTAG 60.561 48.000 0.00 0.00 41.27 2.34
356 357 3.952323 TGTCTCGGGTCTTAGATGTTAGG 59.048 47.826 0.00 0.00 0.00 2.69
357 358 2.957006 TCTCGGGTCTTAGATGTTAGGC 59.043 50.000 0.00 0.00 0.00 3.93
358 359 2.959707 CTCGGGTCTTAGATGTTAGGCT 59.040 50.000 0.00 0.00 0.00 4.58
359 360 3.371965 TCGGGTCTTAGATGTTAGGCTT 58.628 45.455 0.00 0.00 0.00 4.35
360 361 3.132289 TCGGGTCTTAGATGTTAGGCTTG 59.868 47.826 0.00 0.00 0.00 4.01
361 362 3.741388 CGGGTCTTAGATGTTAGGCTTGG 60.741 52.174 0.00 0.00 0.00 3.61
362 363 3.206964 GGTCTTAGATGTTAGGCTTGGC 58.793 50.000 0.00 0.00 0.00 4.52
363 364 3.118223 GGTCTTAGATGTTAGGCTTGGCT 60.118 47.826 0.00 1.64 0.00 4.75
364 365 3.873952 GTCTTAGATGTTAGGCTTGGCTG 59.126 47.826 6.97 0.00 0.00 4.85
365 366 2.332063 TAGATGTTAGGCTTGGCTGC 57.668 50.000 6.97 0.00 0.00 5.25
366 367 0.745845 AGATGTTAGGCTTGGCTGCG 60.746 55.000 6.97 0.00 0.00 5.18
367 368 0.744414 GATGTTAGGCTTGGCTGCGA 60.744 55.000 6.97 0.00 0.00 5.10
368 369 0.107017 ATGTTAGGCTTGGCTGCGAT 60.107 50.000 6.97 0.00 0.00 4.58
369 370 1.026182 TGTTAGGCTTGGCTGCGATG 61.026 55.000 6.97 0.00 0.00 3.84
370 371 1.026718 GTTAGGCTTGGCTGCGATGT 61.027 55.000 6.97 0.00 0.00 3.06
371 372 0.744414 TTAGGCTTGGCTGCGATGTC 60.744 55.000 6.97 0.00 0.00 3.06
372 373 1.617018 TAGGCTTGGCTGCGATGTCT 61.617 55.000 9.40 9.40 0.00 3.41
373 374 2.467826 GGCTTGGCTGCGATGTCTC 61.468 63.158 0.00 0.00 0.00 3.36
375 376 2.125552 TTGGCTGCGATGTCTCGG 60.126 61.111 0.00 0.00 45.15 4.63
376 377 3.664025 TTGGCTGCGATGTCTCGGG 62.664 63.158 0.00 0.00 45.15 5.14
377 378 4.148825 GGCTGCGATGTCTCGGGT 62.149 66.667 0.00 0.00 45.15 5.28
378 379 2.583593 GCTGCGATGTCTCGGGTC 60.584 66.667 0.00 0.00 45.15 4.46
379 380 3.069980 GCTGCGATGTCTCGGGTCT 62.070 63.158 0.00 0.00 45.15 3.85
380 381 1.513158 CTGCGATGTCTCGGGTCTT 59.487 57.895 0.00 0.00 45.15 3.01
381 382 0.738975 CTGCGATGTCTCGGGTCTTA 59.261 55.000 0.00 0.00 45.15 2.10
382 383 0.738975 TGCGATGTCTCGGGTCTTAG 59.261 55.000 0.00 0.00 45.15 2.18
383 384 1.022735 GCGATGTCTCGGGTCTTAGA 58.977 55.000 0.00 0.00 45.15 2.10
384 385 1.609555 GCGATGTCTCGGGTCTTAGAT 59.390 52.381 0.00 0.00 45.15 1.98
385 386 2.605823 GCGATGTCTCGGGTCTTAGATG 60.606 54.545 0.00 0.00 45.15 2.90
386 387 2.619177 CGATGTCTCGGGTCTTAGATGT 59.381 50.000 0.00 0.00 41.27 3.06
387 388 3.066900 CGATGTCTCGGGTCTTAGATGTT 59.933 47.826 0.00 0.00 41.27 2.71
388 389 4.275196 CGATGTCTCGGGTCTTAGATGTTA 59.725 45.833 0.00 0.00 41.27 2.41
389 390 5.561145 CGATGTCTCGGGTCTTAGATGTTAG 60.561 48.000 0.00 0.00 41.27 2.34
390 391 3.952323 TGTCTCGGGTCTTAGATGTTAGG 59.048 47.826 0.00 0.00 0.00 2.69
391 392 2.957006 TCTCGGGTCTTAGATGTTAGGC 59.043 50.000 0.00 0.00 0.00 3.93
392 393 2.959707 CTCGGGTCTTAGATGTTAGGCT 59.040 50.000 0.00 0.00 0.00 4.58
393 394 3.371965 TCGGGTCTTAGATGTTAGGCTT 58.628 45.455 0.00 0.00 0.00 4.35
394 395 3.132289 TCGGGTCTTAGATGTTAGGCTTG 59.868 47.826 0.00 0.00 0.00 4.01
395 396 3.741388 CGGGTCTTAGATGTTAGGCTTGG 60.741 52.174 0.00 0.00 0.00 3.61
396 397 3.206964 GGTCTTAGATGTTAGGCTTGGC 58.793 50.000 0.00 0.00 0.00 4.52
397 398 3.118223 GGTCTTAGATGTTAGGCTTGGCT 60.118 47.826 0.00 1.64 0.00 4.75
398 399 3.873952 GTCTTAGATGTTAGGCTTGGCTG 59.126 47.826 6.97 0.00 0.00 4.85
399 400 2.332063 TAGATGTTAGGCTTGGCTGC 57.668 50.000 6.97 0.00 0.00 5.25
400 401 0.745845 AGATGTTAGGCTTGGCTGCG 60.746 55.000 6.97 0.00 0.00 5.18
401 402 0.744414 GATGTTAGGCTTGGCTGCGA 60.744 55.000 6.97 0.00 0.00 5.10
402 403 0.107017 ATGTTAGGCTTGGCTGCGAT 60.107 50.000 6.97 0.00 0.00 4.58
403 404 1.026182 TGTTAGGCTTGGCTGCGATG 61.026 55.000 6.97 0.00 0.00 3.84
404 405 1.026718 GTTAGGCTTGGCTGCGATGT 61.027 55.000 6.97 0.00 0.00 3.06
405 406 0.744414 TTAGGCTTGGCTGCGATGTC 60.744 55.000 6.97 0.00 0.00 3.06
406 407 1.617018 TAGGCTTGGCTGCGATGTCT 61.617 55.000 9.40 9.40 0.00 3.41
407 408 2.467826 GGCTTGGCTGCGATGTCTC 61.468 63.158 0.00 0.00 0.00 3.36
408 409 1.449246 GCTTGGCTGCGATGTCTCT 60.449 57.895 0.00 0.00 0.00 3.10
409 410 1.023513 GCTTGGCTGCGATGTCTCTT 61.024 55.000 0.00 0.00 0.00 2.85
410 411 1.446907 CTTGGCTGCGATGTCTCTTT 58.553 50.000 0.00 0.00 0.00 2.52
411 412 1.129998 CTTGGCTGCGATGTCTCTTTG 59.870 52.381 0.00 0.00 0.00 2.77
412 413 0.674581 TGGCTGCGATGTCTCTTTGG 60.675 55.000 0.00 0.00 0.00 3.28
413 414 0.674895 GGCTGCGATGTCTCTTTGGT 60.675 55.000 0.00 0.00 0.00 3.67
414 415 1.405526 GGCTGCGATGTCTCTTTGGTA 60.406 52.381 0.00 0.00 0.00 3.25
415 416 2.555199 GCTGCGATGTCTCTTTGGTAT 58.445 47.619 0.00 0.00 0.00 2.73
416 417 2.939103 GCTGCGATGTCTCTTTGGTATT 59.061 45.455 0.00 0.00 0.00 1.89
417 418 4.119862 GCTGCGATGTCTCTTTGGTATTA 58.880 43.478 0.00 0.00 0.00 0.98
418 419 4.210120 GCTGCGATGTCTCTTTGGTATTAG 59.790 45.833 0.00 0.00 0.00 1.73
419 420 4.693283 TGCGATGTCTCTTTGGTATTAGG 58.307 43.478 0.00 0.00 0.00 2.69
420 421 3.495001 GCGATGTCTCTTTGGTATTAGGC 59.505 47.826 0.00 0.00 0.00 3.93
421 422 4.058817 CGATGTCTCTTTGGTATTAGGCC 58.941 47.826 0.00 0.00 0.00 5.19
422 423 3.926058 TGTCTCTTTGGTATTAGGCCC 57.074 47.619 0.00 0.00 0.00 5.80
423 424 3.186283 TGTCTCTTTGGTATTAGGCCCA 58.814 45.455 0.00 0.00 0.00 5.36
424 425 3.199946 TGTCTCTTTGGTATTAGGCCCAG 59.800 47.826 0.00 0.00 31.04 4.45
425 426 2.777692 TCTCTTTGGTATTAGGCCCAGG 59.222 50.000 0.00 0.00 31.04 4.45
426 427 1.214424 TCTTTGGTATTAGGCCCAGGC 59.786 52.381 0.00 0.00 41.06 4.85
427 428 1.215423 CTTTGGTATTAGGCCCAGGCT 59.785 52.381 8.89 0.35 42.39 4.58
428 429 2.199927 TTGGTATTAGGCCCAGGCTA 57.800 50.000 8.89 0.00 39.70 3.93
429 430 2.433444 TGGTATTAGGCCCAGGCTAT 57.567 50.000 8.89 0.32 40.30 2.97
430 431 2.266279 TGGTATTAGGCCCAGGCTATC 58.734 52.381 8.89 0.00 40.30 2.08
431 432 2.158004 TGGTATTAGGCCCAGGCTATCT 60.158 50.000 8.89 0.00 40.30 1.98
432 433 2.237392 GGTATTAGGCCCAGGCTATCTG 59.763 54.545 8.89 0.00 40.30 2.90
433 434 0.695347 ATTAGGCCCAGGCTATCTGC 59.305 55.000 8.89 0.00 40.30 4.26
434 435 1.758440 TTAGGCCCAGGCTATCTGCG 61.758 60.000 8.89 0.00 40.30 5.18
441 442 2.281139 GGCTATCTGCGCCCCTTC 60.281 66.667 4.18 0.00 44.05 3.46
442 443 2.505982 GCTATCTGCGCCCCTTCA 59.494 61.111 4.18 0.00 0.00 3.02
443 444 1.072159 GCTATCTGCGCCCCTTCAT 59.928 57.895 4.18 0.00 0.00 2.57
444 445 0.952984 GCTATCTGCGCCCCTTCATC 60.953 60.000 4.18 0.00 0.00 2.92
445 446 0.394192 CTATCTGCGCCCCTTCATCA 59.606 55.000 4.18 0.00 0.00 3.07
446 447 0.836606 TATCTGCGCCCCTTCATCAA 59.163 50.000 4.18 0.00 0.00 2.57
447 448 0.749454 ATCTGCGCCCCTTCATCAAC 60.749 55.000 4.18 0.00 0.00 3.18
448 449 1.377725 CTGCGCCCCTTCATCAACT 60.378 57.895 4.18 0.00 0.00 3.16
449 450 1.651240 CTGCGCCCCTTCATCAACTG 61.651 60.000 4.18 0.00 0.00 3.16
450 451 2.409870 GCGCCCCTTCATCAACTGG 61.410 63.158 0.00 0.00 0.00 4.00
451 452 1.299648 CGCCCCTTCATCAACTGGA 59.700 57.895 0.00 0.00 0.00 3.86
452 453 0.107017 CGCCCCTTCATCAACTGGAT 60.107 55.000 0.00 0.00 36.39 3.41
453 454 1.140852 CGCCCCTTCATCAACTGGATA 59.859 52.381 0.00 0.00 33.95 2.59
454 455 2.808202 CGCCCCTTCATCAACTGGATAG 60.808 54.545 0.00 0.00 33.95 2.08
455 456 2.487986 GCCCCTTCATCAACTGGATAGG 60.488 54.545 0.00 0.00 33.95 2.57
456 457 2.780010 CCCCTTCATCAACTGGATAGGT 59.220 50.000 0.00 0.00 32.05 3.08
457 458 3.434167 CCCCTTCATCAACTGGATAGGTG 60.434 52.174 0.00 0.00 43.21 4.00
458 459 3.200825 CCCTTCATCAACTGGATAGGTGT 59.799 47.826 0.00 0.00 42.42 4.16
459 460 4.408921 CCCTTCATCAACTGGATAGGTGTA 59.591 45.833 0.00 0.00 42.42 2.90
460 461 5.453903 CCCTTCATCAACTGGATAGGTGTAG 60.454 48.000 0.00 0.00 42.42 2.74
461 462 4.672587 TCATCAACTGGATAGGTGTAGC 57.327 45.455 0.00 0.00 42.42 3.58
462 463 3.068165 TCATCAACTGGATAGGTGTAGCG 59.932 47.826 0.00 0.00 42.42 4.26
463 464 2.730382 TCAACTGGATAGGTGTAGCGA 58.270 47.619 0.00 0.00 42.42 4.93
464 465 2.426024 TCAACTGGATAGGTGTAGCGAC 59.574 50.000 0.00 0.00 42.42 5.19
465 466 2.139323 ACTGGATAGGTGTAGCGACA 57.861 50.000 0.00 0.00 0.00 4.35
466 467 2.025155 ACTGGATAGGTGTAGCGACAG 58.975 52.381 0.00 0.00 35.82 3.51
467 468 2.025155 CTGGATAGGTGTAGCGACAGT 58.975 52.381 0.00 0.00 35.82 3.55
468 469 2.427453 CTGGATAGGTGTAGCGACAGTT 59.573 50.000 0.00 0.00 35.82 3.16
469 470 2.829720 TGGATAGGTGTAGCGACAGTTT 59.170 45.455 0.00 0.00 35.82 2.66
470 471 3.187700 GGATAGGTGTAGCGACAGTTTG 58.812 50.000 0.00 0.00 35.82 2.93
471 472 3.368116 GGATAGGTGTAGCGACAGTTTGT 60.368 47.826 0.00 0.00 35.82 2.83
472 473 2.614829 AGGTGTAGCGACAGTTTGTT 57.385 45.000 0.00 0.00 35.82 2.83
473 474 2.210116 AGGTGTAGCGACAGTTTGTTG 58.790 47.619 0.00 0.00 35.82 3.33
481 482 3.155344 CGACAGTTTGTTGCTTAGACG 57.845 47.619 0.00 0.00 0.00 4.18
482 483 2.096909 CGACAGTTTGTTGCTTAGACGG 60.097 50.000 0.00 0.00 0.00 4.79
483 484 1.602377 ACAGTTTGTTGCTTAGACGGC 59.398 47.619 0.00 0.00 0.00 5.68
484 485 0.865769 AGTTTGTTGCTTAGACGGCG 59.134 50.000 4.80 4.80 0.00 6.46
485 486 0.110373 GTTTGTTGCTTAGACGGCGG 60.110 55.000 13.24 0.00 0.00 6.13
486 487 1.847890 TTTGTTGCTTAGACGGCGGC 61.848 55.000 13.24 8.92 0.00 6.53
487 488 2.434359 GTTGCTTAGACGGCGGCT 60.434 61.111 23.30 23.30 0.00 5.52
488 489 2.033194 GTTGCTTAGACGGCGGCTT 61.033 57.895 25.39 5.00 0.00 4.35
489 490 1.302192 TTGCTTAGACGGCGGCTTT 60.302 52.632 25.39 0.00 0.00 3.51
490 491 0.037139 TTGCTTAGACGGCGGCTTTA 60.037 50.000 25.39 9.12 0.00 1.85
491 492 0.459585 TGCTTAGACGGCGGCTTTAG 60.460 55.000 25.39 20.26 0.00 1.85
492 493 0.459759 GCTTAGACGGCGGCTTTAGT 60.460 55.000 25.39 0.00 0.00 2.24
493 494 1.557651 CTTAGACGGCGGCTTTAGTC 58.442 55.000 25.39 0.85 0.00 2.59
494 495 1.134560 CTTAGACGGCGGCTTTAGTCT 59.865 52.381 25.39 18.41 44.90 3.24
495 496 1.180029 TAGACGGCGGCTTTAGTCTT 58.820 50.000 25.39 0.00 42.99 3.01
496 497 1.180029 AGACGGCGGCTTTAGTCTTA 58.820 50.000 10.88 0.00 40.64 2.10
497 498 1.135170 AGACGGCGGCTTTAGTCTTAC 60.135 52.381 10.88 0.00 40.64 2.34
498 499 0.893447 ACGGCGGCTTTAGTCTTACT 59.107 50.000 13.24 0.00 0.00 2.24
499 500 1.278238 CGGCGGCTTTAGTCTTACTG 58.722 55.000 7.61 0.00 0.00 2.74
500 501 1.403780 CGGCGGCTTTAGTCTTACTGT 60.404 52.381 7.61 0.00 0.00 3.55
501 502 2.696506 GGCGGCTTTAGTCTTACTGTT 58.303 47.619 0.00 0.00 0.00 3.16
502 503 2.415512 GGCGGCTTTAGTCTTACTGTTG 59.584 50.000 0.00 0.00 0.00 3.33
503 504 3.064931 GCGGCTTTAGTCTTACTGTTGT 58.935 45.455 0.00 0.00 0.00 3.32
504 505 4.240096 GCGGCTTTAGTCTTACTGTTGTA 58.760 43.478 0.00 0.00 0.00 2.41
505 506 4.868734 GCGGCTTTAGTCTTACTGTTGTAT 59.131 41.667 0.00 0.00 0.00 2.29
506 507 5.220416 GCGGCTTTAGTCTTACTGTTGTATG 60.220 44.000 0.00 0.00 0.00 2.39
507 508 6.097356 CGGCTTTAGTCTTACTGTTGTATGA 58.903 40.000 0.00 0.00 32.61 2.15
508 509 6.034683 CGGCTTTAGTCTTACTGTTGTATGAC 59.965 42.308 11.70 11.70 45.97 3.06
517 518 8.709646 GTCTTACTGTTGTATGACTTTGTAAGG 58.290 37.037 0.00 0.00 44.06 2.69
518 519 8.426489 TCTTACTGTTGTATGACTTTGTAAGGT 58.574 33.333 0.00 0.00 37.36 3.50
519 520 8.597662 TTACTGTTGTATGACTTTGTAAGGTC 57.402 34.615 0.44 0.44 0.00 3.85
520 521 6.827727 ACTGTTGTATGACTTTGTAAGGTCT 58.172 36.000 8.11 0.00 34.01 3.85
521 522 7.280356 ACTGTTGTATGACTTTGTAAGGTCTT 58.720 34.615 8.11 4.91 34.01 3.01
522 523 7.226720 ACTGTTGTATGACTTTGTAAGGTCTTG 59.773 37.037 8.11 0.00 34.01 3.02
523 524 7.051623 TGTTGTATGACTTTGTAAGGTCTTGT 58.948 34.615 8.11 0.00 34.01 3.16
524 525 7.011950 TGTTGTATGACTTTGTAAGGTCTTGTG 59.988 37.037 8.11 0.00 34.01 3.33
525 526 6.822442 TGTATGACTTTGTAAGGTCTTGTGA 58.178 36.000 8.11 0.00 34.01 3.58
526 527 6.929049 TGTATGACTTTGTAAGGTCTTGTGAG 59.071 38.462 8.11 0.00 34.01 3.51
527 528 5.607939 TGACTTTGTAAGGTCTTGTGAGA 57.392 39.130 8.11 0.00 34.01 3.27
528 529 5.984725 TGACTTTGTAAGGTCTTGTGAGAA 58.015 37.500 8.11 0.00 32.66 2.87
529 530 6.591935 TGACTTTGTAAGGTCTTGTGAGAAT 58.408 36.000 8.11 0.00 32.66 2.40
530 531 7.732025 TGACTTTGTAAGGTCTTGTGAGAATA 58.268 34.615 8.11 0.00 32.66 1.75
531 532 8.208224 TGACTTTGTAAGGTCTTGTGAGAATAA 58.792 33.333 8.11 0.00 32.66 1.40
532 533 9.220767 GACTTTGTAAGGTCTTGTGAGAATAAT 57.779 33.333 0.23 0.00 32.66 1.28
533 534 9.574516 ACTTTGTAAGGTCTTGTGAGAATAATT 57.425 29.630 0.00 0.00 32.66 1.40
546 547 9.781834 TTGTGAGAATAATTAATAAAGTTGCCG 57.218 29.630 0.00 0.00 0.00 5.69
547 548 8.952278 TGTGAGAATAATTAATAAAGTTGCCGT 58.048 29.630 0.00 0.00 0.00 5.68
551 552 9.893305 AGAATAATTAATAAAGTTGCCGTATGC 57.107 29.630 0.00 0.00 41.77 3.14
560 561 3.349006 GCCGTATGCATCGCCCAG 61.349 66.667 0.19 0.00 40.77 4.45
561 562 2.421314 CCGTATGCATCGCCCAGA 59.579 61.111 0.19 0.00 0.00 3.86
562 563 1.004560 CCGTATGCATCGCCCAGAT 60.005 57.895 0.19 0.00 41.01 2.90
569 570 2.827423 ATCGCCCAGATGCAGAGG 59.173 61.111 0.00 0.00 38.36 3.69
570 571 3.472943 ATCGCCCAGATGCAGAGGC 62.473 63.158 8.59 8.59 42.18 4.70
573 574 4.559063 CCCAGATGCAGAGGCCGG 62.559 72.222 0.00 0.00 40.13 6.13
574 575 4.559063 CCAGATGCAGAGGCCGGG 62.559 72.222 2.18 0.00 40.13 5.73
575 576 4.559063 CAGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
581 582 3.866582 CAGAGGCCGGGGGTCATC 61.867 72.222 2.18 0.00 0.00 2.92
594 595 4.586306 GGGGTCATCCTCCTTTTCTAAA 57.414 45.455 0.00 0.00 35.33 1.85
595 596 4.930696 GGGGTCATCCTCCTTTTCTAAAA 58.069 43.478 0.00 0.00 35.33 1.52
596 597 5.330233 GGGGTCATCCTCCTTTTCTAAAAA 58.670 41.667 0.00 0.00 35.33 1.94
636 637 3.688694 AAAAGCTGACATACGTACCCA 57.311 42.857 0.00 0.00 0.00 4.51
637 638 2.667473 AAGCTGACATACGTACCCAC 57.333 50.000 0.00 0.00 0.00 4.61
638 639 1.848652 AGCTGACATACGTACCCACT 58.151 50.000 0.00 0.00 0.00 4.00
639 640 2.176889 AGCTGACATACGTACCCACTT 58.823 47.619 0.00 0.00 0.00 3.16
640 641 3.359033 AGCTGACATACGTACCCACTTA 58.641 45.455 0.00 0.00 0.00 2.24
641 642 3.380637 AGCTGACATACGTACCCACTTAG 59.619 47.826 0.00 0.00 0.00 2.18
642 643 3.490419 GCTGACATACGTACCCACTTAGG 60.490 52.174 0.00 0.00 37.03 2.69
651 652 4.247781 CCACTTAGGGGCTGCATG 57.752 61.111 0.50 0.00 0.00 4.06
652 653 2.123428 CCACTTAGGGGCTGCATGC 61.123 63.158 11.82 11.82 41.94 4.06
653 654 1.378911 CACTTAGGGGCTGCATGCA 60.379 57.895 21.29 21.29 45.15 3.96
654 655 0.754217 CACTTAGGGGCTGCATGCAT 60.754 55.000 22.97 8.57 45.15 3.96
655 656 0.466922 ACTTAGGGGCTGCATGCATC 60.467 55.000 22.97 17.75 45.15 3.91
656 657 0.466739 CTTAGGGGCTGCATGCATCA 60.467 55.000 22.97 0.00 45.15 3.07
657 658 0.752743 TTAGGGGCTGCATGCATCAC 60.753 55.000 22.97 18.98 45.15 3.06
658 659 1.638679 TAGGGGCTGCATGCATCACT 61.639 55.000 22.97 23.29 45.15 3.41
659 660 2.487532 GGGGCTGCATGCATCACTC 61.488 63.158 22.97 13.64 45.15 3.51
660 661 1.453379 GGGCTGCATGCATCACTCT 60.453 57.895 22.97 0.00 45.15 3.24
661 662 1.725557 GGGCTGCATGCATCACTCTG 61.726 60.000 22.97 8.76 45.15 3.35
662 663 0.746923 GGCTGCATGCATCACTCTGA 60.747 55.000 22.97 0.00 45.15 3.27
663 664 1.309950 GCTGCATGCATCACTCTGAT 58.690 50.000 22.97 0.00 42.31 2.90
676 677 3.117657 TCTGATGTAGAGGCCGGAG 57.882 57.895 5.05 0.00 0.00 4.63
753 755 9.140286 GCCTGAGTTTTAATTATTTTTCCTGAC 57.860 33.333 0.00 0.00 0.00 3.51
768 770 7.901874 TTTTCCTGACTTTTAATTTCGTTCG 57.098 32.000 0.00 0.00 0.00 3.95
769 771 6.607735 TTCCTGACTTTTAATTTCGTTCGT 57.392 33.333 0.00 0.00 0.00 3.85
952 960 0.872388 GTTAACCGCCACAGAACTGG 59.128 55.000 6.76 0.00 34.19 4.00
993 1001 1.471327 GCTTGTGTGCACACCAAATGT 60.471 47.619 39.34 0.00 45.88 2.71
1028 1036 0.873312 CAGTGGATGCGGATCACTCG 60.873 60.000 19.14 10.42 0.00 4.18
1036 1044 0.459585 GCGGATCACTCGCCACTTAA 60.460 55.000 3.75 0.00 46.55 1.85
1040 1048 2.197577 GATCACTCGCCACTTAAGCTC 58.802 52.381 1.29 0.00 0.00 4.09
1065 1073 1.122019 ACCTGCGGTGAAGGAGAACT 61.122 55.000 0.00 0.00 38.27 3.01
1066 1074 0.390472 CCTGCGGTGAAGGAGAACTC 60.390 60.000 0.00 0.00 36.91 3.01
1067 1075 0.318441 CTGCGGTGAAGGAGAACTCA 59.682 55.000 4.23 0.00 0.00 3.41
1068 1076 0.756294 TGCGGTGAAGGAGAACTCAA 59.244 50.000 4.23 0.00 0.00 3.02
1071 1079 2.616842 GCGGTGAAGGAGAACTCAAAAA 59.383 45.455 4.23 0.00 0.00 1.94
1151 1160 0.038744 CATTTGGGCTCCACCAGAGT 59.961 55.000 0.00 0.00 45.21 3.24
1176 1185 0.892358 CTCCTTCAAGCCAAGCAGCA 60.892 55.000 0.00 0.00 34.23 4.41
1310 1322 1.757340 GGTCCGGTCGGAGAAGGAT 60.757 63.158 12.80 0.00 44.93 3.24
1752 1766 3.057736 CCTTCCTCTGAGCAAACAACATG 60.058 47.826 0.00 0.00 0.00 3.21
1813 1827 5.587043 TGTTTCTGAAAATACAGTTGACGGT 59.413 36.000 4.09 0.00 38.79 4.83
2104 2124 6.990798 TGTGAAATGGTTTTTGATGAGCATA 58.009 32.000 0.00 0.00 33.94 3.14
2193 2213 6.566079 TGGAGAAATAGATGAACCACTGAT 57.434 37.500 0.00 0.00 0.00 2.90
2259 2279 8.911018 ACATTATGGGGTATTATCTACTAGCA 57.089 34.615 0.00 0.00 0.00 3.49
2326 2346 1.270678 ACTTTGGCCGACAGACTTACC 60.271 52.381 0.00 0.00 0.00 2.85
2330 2350 1.754803 TGGCCGACAGACTTACCATAG 59.245 52.381 0.00 0.00 0.00 2.23
2332 2352 2.628657 GGCCGACAGACTTACCATAGAT 59.371 50.000 0.00 0.00 0.00 1.98
2336 2356 5.241064 GCCGACAGACTTACCATAGATCTAA 59.759 44.000 6.52 0.00 0.00 2.10
2488 2511 5.782047 ACACTGAACTTCTCTTCTCTGATG 58.218 41.667 0.00 0.00 0.00 3.07
2530 2553 1.961793 TGTGTTCCTTCCGAAACTGG 58.038 50.000 0.00 0.00 30.39 4.00
2533 2556 1.145803 GTTCCTTCCGAAACTGGACG 58.854 55.000 0.00 0.00 37.89 4.79
2561 2584 7.864379 CACTCTTGACATAAAACATTTCAGCTT 59.136 33.333 0.00 0.00 0.00 3.74
2576 2599 4.581309 TCAGCTTTGGGATTCAGAGAAT 57.419 40.909 0.00 0.00 29.82 2.40
2602 2625 1.079197 TGCGAGTAGTGCCCATGTG 60.079 57.895 0.00 0.00 0.00 3.21
2653 2676 1.561769 ATGGCGTCCTTGGATGACCA 61.562 55.000 19.54 19.54 45.34 4.02
2662 2685 1.899437 TTGGATGACCACCGCTCTCC 61.899 60.000 0.00 0.00 46.80 3.71
2782 2805 2.743553 TCTGGATCAGTCATGAGAGCA 58.256 47.619 0.00 0.00 39.29 4.26
2788 2811 4.880120 GGATCAGTCATGAGAGCATCAAAA 59.120 41.667 0.00 0.00 42.53 2.44
2899 2922 3.369147 CCTCAACAGCATACTTCTTGTCG 59.631 47.826 0.00 0.00 0.00 4.35
2920 2943 2.421952 GGCCCTTCTCTCATATGCAACA 60.422 50.000 0.00 0.00 0.00 3.33
2934 2957 1.805943 TGCAACATGACTGTCGATTGG 59.194 47.619 15.71 3.46 33.36 3.16
2935 2958 1.131126 GCAACATGACTGTCGATTGGG 59.869 52.381 15.71 7.31 33.36 4.12
2936 2959 1.739466 CAACATGACTGTCGATTGGGG 59.261 52.381 0.00 0.00 33.36 4.96
2937 2960 0.984230 ACATGACTGTCGATTGGGGT 59.016 50.000 0.00 0.00 0.00 4.95
2941 2964 1.270625 TGACTGTCGATTGGGGTTGTC 60.271 52.381 2.98 0.00 0.00 3.18
2959 2982 1.067582 CGATAGGCCGAGGTTCCAC 59.932 63.158 0.00 0.00 0.00 4.02
2989 3012 6.002062 ACTTTCGTCCAATCAAAGATGAAC 57.998 37.500 0.00 0.00 39.49 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.349026 CAGCTTGAAGTCCTTGGAGGA 59.651 52.381 0.00 0.00 43.43 3.71
1 2 1.072965 ACAGCTTGAAGTCCTTGGAGG 59.927 52.381 0.00 0.00 36.46 4.30
2 3 2.149578 CACAGCTTGAAGTCCTTGGAG 58.850 52.381 0.00 0.00 0.00 3.86
3 4 1.490490 ACACAGCTTGAAGTCCTTGGA 59.510 47.619 0.00 0.00 0.00 3.53
4 5 1.876156 GACACAGCTTGAAGTCCTTGG 59.124 52.381 0.00 0.00 0.00 3.61
5 6 1.528586 CGACACAGCTTGAAGTCCTTG 59.471 52.381 0.00 0.00 0.00 3.61
6 7 1.541233 CCGACACAGCTTGAAGTCCTT 60.541 52.381 0.00 0.00 0.00 3.36
7 8 0.034059 CCGACACAGCTTGAAGTCCT 59.966 55.000 0.00 0.00 0.00 3.85
8 9 1.569479 GCCGACACAGCTTGAAGTCC 61.569 60.000 0.00 0.00 0.00 3.85
9 10 0.601311 AGCCGACACAGCTTGAAGTC 60.601 55.000 0.00 0.00 37.24 3.01
10 11 0.882042 CAGCCGACACAGCTTGAAGT 60.882 55.000 0.00 0.00 38.95 3.01
11 12 1.572085 CCAGCCGACACAGCTTGAAG 61.572 60.000 3.37 0.00 38.95 3.02
12 13 1.597854 CCAGCCGACACAGCTTGAA 60.598 57.895 3.37 0.00 38.95 2.69
13 14 2.031012 CCAGCCGACACAGCTTGA 59.969 61.111 3.37 0.00 38.95 3.02
14 15 2.281070 ACCAGCCGACACAGCTTG 60.281 61.111 0.00 0.00 38.95 4.01
15 16 2.281070 CACCAGCCGACACAGCTT 60.281 61.111 0.00 0.00 38.95 3.74
16 17 4.320456 CCACCAGCCGACACAGCT 62.320 66.667 0.00 0.00 42.70 4.24
17 18 3.234630 TACCACCAGCCGACACAGC 62.235 63.158 0.00 0.00 0.00 4.40
18 19 1.374252 GTACCACCAGCCGACACAG 60.374 63.158 0.00 0.00 0.00 3.66
19 20 1.404479 AAGTACCACCAGCCGACACA 61.404 55.000 0.00 0.00 0.00 3.72
20 21 0.949105 CAAGTACCACCAGCCGACAC 60.949 60.000 0.00 0.00 0.00 3.67
21 22 1.369692 CAAGTACCACCAGCCGACA 59.630 57.895 0.00 0.00 0.00 4.35
22 23 1.375523 CCAAGTACCACCAGCCGAC 60.376 63.158 0.00 0.00 0.00 4.79
23 24 3.065306 CCAAGTACCACCAGCCGA 58.935 61.111 0.00 0.00 0.00 5.54
24 25 2.746277 GCCAAGTACCACCAGCCG 60.746 66.667 0.00 0.00 0.00 5.52
25 26 1.675641 CTGCCAAGTACCACCAGCC 60.676 63.158 0.00 0.00 0.00 4.85
26 27 2.335712 GCTGCCAAGTACCACCAGC 61.336 63.158 8.88 8.88 41.57 4.85
27 28 0.322816 ATGCTGCCAAGTACCACCAG 60.323 55.000 0.00 0.00 0.00 4.00
28 29 0.608856 CATGCTGCCAAGTACCACCA 60.609 55.000 0.00 0.00 0.00 4.17
29 30 1.315257 CCATGCTGCCAAGTACCACC 61.315 60.000 0.00 0.00 0.00 4.61
30 31 1.937546 GCCATGCTGCCAAGTACCAC 61.938 60.000 0.00 0.00 0.00 4.16
31 32 1.678635 GCCATGCTGCCAAGTACCA 60.679 57.895 0.00 0.00 0.00 3.25
32 33 2.764314 CGCCATGCTGCCAAGTACC 61.764 63.158 0.00 0.00 0.00 3.34
33 34 2.793946 CGCCATGCTGCCAAGTAC 59.206 61.111 0.00 0.00 0.00 2.73
34 35 3.133464 GCGCCATGCTGCCAAGTA 61.133 61.111 0.00 0.00 41.73 2.24
43 44 1.502163 GATACACCTCAGCGCCATGC 61.502 60.000 2.29 0.00 46.98 4.06
44 45 0.179076 TGATACACCTCAGCGCCATG 60.179 55.000 2.29 0.00 0.00 3.66
45 46 0.105593 CTGATACACCTCAGCGCCAT 59.894 55.000 2.29 0.00 36.53 4.40
46 47 1.257750 ACTGATACACCTCAGCGCCA 61.258 55.000 2.29 0.00 45.37 5.69
47 48 0.807667 CACTGATACACCTCAGCGCC 60.808 60.000 2.29 0.00 45.37 6.53
48 49 0.807667 CCACTGATACACCTCAGCGC 60.808 60.000 0.00 0.00 45.37 5.92
49 50 0.807667 GCCACTGATACACCTCAGCG 60.808 60.000 1.14 0.00 45.37 5.18
50 51 0.807667 CGCCACTGATACACCTCAGC 60.808 60.000 1.14 0.00 45.37 4.26
51 52 0.817654 TCGCCACTGATACACCTCAG 59.182 55.000 0.00 0.00 46.59 3.35
52 53 0.530744 GTCGCCACTGATACACCTCA 59.469 55.000 0.00 0.00 0.00 3.86
53 54 0.179108 GGTCGCCACTGATACACCTC 60.179 60.000 0.00 0.00 0.00 3.85
54 55 1.898154 GGTCGCCACTGATACACCT 59.102 57.895 0.00 0.00 0.00 4.00
55 56 1.518572 CGGTCGCCACTGATACACC 60.519 63.158 0.00 0.00 0.00 4.16
56 57 2.165301 GCGGTCGCCACTGATACAC 61.165 63.158 3.73 0.00 34.56 2.90
57 58 2.183300 GCGGTCGCCACTGATACA 59.817 61.111 3.73 0.00 34.56 2.29
58 59 2.954868 CGCGGTCGCCACTGATAC 60.955 66.667 9.85 0.00 37.98 2.24
59 60 3.135457 TCGCGGTCGCCACTGATA 61.135 61.111 6.13 0.00 37.98 2.15
60 61 4.796231 GTCGCGGTCGCCACTGAT 62.796 66.667 6.13 0.00 37.98 2.90
68 69 3.458579 CTGAACACGTCGCGGTCG 61.459 66.667 19.12 19.12 0.00 4.79
69 70 3.764049 GCTGAACACGTCGCGGTC 61.764 66.667 6.13 0.00 0.00 4.79
70 71 4.280494 AGCTGAACACGTCGCGGT 62.280 61.111 6.13 0.00 32.99 5.68
71 72 3.767230 CAGCTGAACACGTCGCGG 61.767 66.667 8.42 0.00 32.99 6.46
72 73 2.089433 AAACAGCTGAACACGTCGCG 62.089 55.000 23.35 0.00 32.99 5.87
73 74 0.654472 CAAACAGCTGAACACGTCGC 60.654 55.000 23.35 0.00 0.00 5.19
74 75 0.654472 GCAAACAGCTGAACACGTCG 60.654 55.000 23.35 0.64 41.15 5.12
75 76 0.654472 CGCAAACAGCTGAACACGTC 60.654 55.000 23.35 1.56 42.61 4.34
76 77 1.351707 CGCAAACAGCTGAACACGT 59.648 52.632 23.35 0.00 42.61 4.49
77 78 2.005537 GCGCAAACAGCTGAACACG 61.006 57.895 23.35 18.65 42.61 4.49
78 79 2.005537 CGCGCAAACAGCTGAACAC 61.006 57.895 23.35 6.11 42.61 3.32
79 80 2.327592 CGCGCAAACAGCTGAACA 59.672 55.556 23.35 0.00 42.61 3.18
80 81 3.093449 GCGCGCAAACAGCTGAAC 61.093 61.111 29.10 5.34 42.61 3.18
81 82 3.525844 CTGCGCGCAAACAGCTGAA 62.526 57.895 35.50 7.85 42.61 3.02
82 83 4.016629 CTGCGCGCAAACAGCTGA 62.017 61.111 35.50 8.69 42.61 4.26
86 87 4.093952 CTCCCTGCGCGCAAACAG 62.094 66.667 35.50 24.39 0.00 3.16
97 98 3.322466 AACGGCACCTCCTCCCTG 61.322 66.667 0.00 0.00 0.00 4.45
98 99 3.322466 CAACGGCACCTCCTCCCT 61.322 66.667 0.00 0.00 0.00 4.20
99 100 4.410400 CCAACGGCACCTCCTCCC 62.410 72.222 0.00 0.00 0.00 4.30
100 101 4.410400 CCCAACGGCACCTCCTCC 62.410 72.222 0.00 0.00 0.00 4.30
120 121 2.344521 TATCGTCGACGCCACCATGG 62.345 60.000 32.19 11.19 41.55 3.66
121 122 0.934901 CTATCGTCGACGCCACCATG 60.935 60.000 32.19 13.48 39.60 3.66
122 123 1.359117 CTATCGTCGACGCCACCAT 59.641 57.895 32.19 21.59 39.60 3.55
123 124 2.795973 CTATCGTCGACGCCACCA 59.204 61.111 32.19 15.92 39.60 4.17
124 125 2.654404 GCTATCGTCGACGCCACC 60.654 66.667 32.19 16.46 39.60 4.61
125 126 1.939785 CAGCTATCGTCGACGCCAC 60.940 63.158 32.19 20.14 39.60 5.01
126 127 2.407616 CAGCTATCGTCGACGCCA 59.592 61.111 32.19 20.24 39.60 5.69
127 128 2.353607 CCAGCTATCGTCGACGCC 60.354 66.667 32.19 18.98 39.60 5.68
128 129 1.654743 GTCCAGCTATCGTCGACGC 60.655 63.158 32.19 18.42 39.60 5.19
129 130 1.009900 GGTCCAGCTATCGTCGACG 60.010 63.158 31.30 31.30 41.45 5.12
130 131 1.009900 CGGTCCAGCTATCGTCGAC 60.010 63.158 5.18 5.18 0.00 4.20
131 132 1.153309 TCGGTCCAGCTATCGTCGA 60.153 57.895 0.00 0.00 0.00 4.20
132 133 1.280142 CTCGGTCCAGCTATCGTCG 59.720 63.158 0.00 0.00 0.00 5.12
133 134 1.008309 GCTCGGTCCAGCTATCGTC 60.008 63.158 6.17 0.00 36.38 4.20
134 135 1.320344 TTGCTCGGTCCAGCTATCGT 61.320 55.000 12.62 0.00 40.39 3.73
135 136 0.596083 CTTGCTCGGTCCAGCTATCG 60.596 60.000 12.62 0.00 40.39 2.92
136 137 0.249657 CCTTGCTCGGTCCAGCTATC 60.250 60.000 12.62 0.00 40.39 2.08
137 138 0.978146 ACCTTGCTCGGTCCAGCTAT 60.978 55.000 12.62 0.00 40.39 2.97
138 139 1.192146 AACCTTGCTCGGTCCAGCTA 61.192 55.000 12.62 6.21 40.39 3.32
139 140 2.520536 AACCTTGCTCGGTCCAGCT 61.521 57.895 12.62 0.00 40.39 4.24
140 141 2.032681 AACCTTGCTCGGTCCAGC 59.967 61.111 6.41 6.41 35.89 4.85
141 142 0.036010 ATCAACCTTGCTCGGTCCAG 60.036 55.000 0.00 0.00 35.89 3.86
142 143 0.321564 CATCAACCTTGCTCGGTCCA 60.322 55.000 0.00 0.00 35.89 4.02
143 144 1.648467 GCATCAACCTTGCTCGGTCC 61.648 60.000 0.00 0.00 35.89 4.46
144 145 0.955428 TGCATCAACCTTGCTCGGTC 60.955 55.000 0.00 0.00 40.77 4.79
145 146 0.322816 ATGCATCAACCTTGCTCGGT 60.323 50.000 0.00 0.00 40.77 4.69
146 147 0.379669 GATGCATCAACCTTGCTCGG 59.620 55.000 21.92 0.00 40.77 4.63
147 148 1.063616 CTGATGCATCAACCTTGCTCG 59.936 52.381 28.39 11.12 40.77 5.03
148 149 2.089980 ACTGATGCATCAACCTTGCTC 58.910 47.619 28.39 0.00 40.77 4.26
149 150 2.211250 ACTGATGCATCAACCTTGCT 57.789 45.000 28.39 6.52 40.77 3.91
150 151 2.749076 TGTACTGATGCATCAACCTTGC 59.251 45.455 28.39 16.65 40.55 4.01
151 152 4.005650 ACTGTACTGATGCATCAACCTTG 58.994 43.478 28.39 18.95 36.18 3.61
152 153 4.292186 ACTGTACTGATGCATCAACCTT 57.708 40.909 28.39 15.80 36.18 3.50
153 154 3.988976 ACTGTACTGATGCATCAACCT 57.011 42.857 28.39 16.49 36.18 3.50
154 155 4.093998 CAGAACTGTACTGATGCATCAACC 59.906 45.833 28.39 18.82 37.54 3.77
155 156 4.931601 TCAGAACTGTACTGATGCATCAAC 59.068 41.667 28.39 23.87 39.10 3.18
156 157 5.151297 TCAGAACTGTACTGATGCATCAA 57.849 39.130 28.39 13.65 39.10 2.57
157 158 4.806640 TCAGAACTGTACTGATGCATCA 57.193 40.909 27.10 27.10 39.10 3.07
158 159 5.414360 TCTTCAGAACTGTACTGATGCATC 58.586 41.667 20.14 20.14 42.68 3.91
159 160 5.411831 TCTTCAGAACTGTACTGATGCAT 57.588 39.130 0.00 0.00 42.68 3.96
160 161 4.871933 TCTTCAGAACTGTACTGATGCA 57.128 40.909 6.77 0.00 42.68 3.96
161 162 4.569966 CCATCTTCAGAACTGTACTGATGC 59.430 45.833 6.77 0.00 42.68 3.91
162 163 5.970592 TCCATCTTCAGAACTGTACTGATG 58.029 41.667 6.77 0.00 42.68 3.07
163 164 5.395103 GCTCCATCTTCAGAACTGTACTGAT 60.395 44.000 6.77 0.00 42.68 2.90
164 165 4.081972 GCTCCATCTTCAGAACTGTACTGA 60.082 45.833 6.77 0.00 41.70 3.41
165 166 4.180057 GCTCCATCTTCAGAACTGTACTG 58.820 47.826 0.00 0.00 36.80 2.74
166 167 3.119316 CGCTCCATCTTCAGAACTGTACT 60.119 47.826 1.73 0.00 0.00 2.73
167 168 3.182967 CGCTCCATCTTCAGAACTGTAC 58.817 50.000 1.73 0.00 0.00 2.90
168 169 2.166459 CCGCTCCATCTTCAGAACTGTA 59.834 50.000 1.73 0.00 0.00 2.74
169 170 1.066573 CCGCTCCATCTTCAGAACTGT 60.067 52.381 1.73 0.00 0.00 3.55
170 171 1.066573 ACCGCTCCATCTTCAGAACTG 60.067 52.381 0.00 0.00 0.00 3.16
171 172 1.066573 CACCGCTCCATCTTCAGAACT 60.067 52.381 0.00 0.00 0.00 3.01
172 173 1.363744 CACCGCTCCATCTTCAGAAC 58.636 55.000 0.00 0.00 0.00 3.01
173 174 0.250234 CCACCGCTCCATCTTCAGAA 59.750 55.000 0.00 0.00 0.00 3.02
174 175 1.900351 CCACCGCTCCATCTTCAGA 59.100 57.895 0.00 0.00 0.00 3.27
175 176 1.817099 GCCACCGCTCCATCTTCAG 60.817 63.158 0.00 0.00 0.00 3.02
176 177 2.268920 GCCACCGCTCCATCTTCA 59.731 61.111 0.00 0.00 0.00 3.02
177 178 1.817099 CTGCCACCGCTCCATCTTC 60.817 63.158 0.00 0.00 35.36 2.87
178 179 2.129555 AACTGCCACCGCTCCATCTT 62.130 55.000 0.00 0.00 35.36 2.40
179 180 2.596851 AACTGCCACCGCTCCATCT 61.597 57.895 0.00 0.00 35.36 2.90
180 181 2.045926 AACTGCCACCGCTCCATC 60.046 61.111 0.00 0.00 35.36 3.51
181 182 2.360350 CAACTGCCACCGCTCCAT 60.360 61.111 0.00 0.00 35.36 3.41
182 183 4.641645 CCAACTGCCACCGCTCCA 62.642 66.667 0.00 0.00 35.36 3.86
204 205 4.828925 GTGCTCTCAGAGGCCGCC 62.829 72.222 3.18 0.00 0.00 6.13
207 208 4.828925 GGCGTGCTCTCAGAGGCC 62.829 72.222 3.18 4.12 0.00 5.19
209 210 4.504916 CCGGCGTGCTCTCAGAGG 62.505 72.222 6.01 0.00 0.00 3.69
210 211 3.443925 TCCGGCGTGCTCTCAGAG 61.444 66.667 6.01 0.00 0.00 3.35
211 212 3.749064 GTCCGGCGTGCTCTCAGA 61.749 66.667 6.01 0.00 0.00 3.27
212 213 4.803426 GGTCCGGCGTGCTCTCAG 62.803 72.222 6.01 0.00 0.00 3.35
214 215 4.803426 CTGGTCCGGCGTGCTCTC 62.803 72.222 6.01 0.00 0.00 3.20
219 220 4.602259 ACACACTGGTCCGGCGTG 62.602 66.667 15.97 15.97 34.92 5.34
220 221 4.602259 CACACACTGGTCCGGCGT 62.602 66.667 6.01 0.00 0.00 5.68
221 222 4.602259 ACACACACTGGTCCGGCG 62.602 66.667 0.00 0.00 0.00 6.46
222 223 2.665185 GACACACACTGGTCCGGC 60.665 66.667 0.00 0.00 0.00 6.13
223 224 2.030562 GGACACACACTGGTCCGG 59.969 66.667 0.00 0.00 43.67 5.14
226 227 0.249911 GTCTGGGACACACACTGGTC 60.250 60.000 0.00 0.00 32.09 4.02
227 228 1.696097 GGTCTGGGACACACACTGGT 61.696 60.000 0.14 0.00 33.68 4.00
228 229 1.071471 GGTCTGGGACACACACTGG 59.929 63.158 0.14 0.00 33.68 4.00
229 230 1.071471 GGGTCTGGGACACACACTG 59.929 63.158 0.14 0.00 35.79 3.66
230 231 2.507854 CGGGTCTGGGACACACACT 61.508 63.158 0.89 0.00 35.39 3.55
231 232 2.030562 CGGGTCTGGGACACACAC 59.969 66.667 0.89 0.00 35.39 3.82
232 233 3.238497 CCGGGTCTGGGACACACA 61.238 66.667 0.00 0.00 35.39 3.72
233 234 4.699522 GCCGGGTCTGGGACACAC 62.700 72.222 2.18 0.00 35.39 3.82
235 236 3.901797 CTTGCCGGGTCTGGGACAC 62.902 68.421 2.18 0.00 33.68 3.67
236 237 3.636231 CTTGCCGGGTCTGGGACA 61.636 66.667 2.18 0.00 33.68 4.02
237 238 3.637273 ACTTGCCGGGTCTGGGAC 61.637 66.667 2.18 0.00 0.00 4.46
238 239 3.636231 CACTTGCCGGGTCTGGGA 61.636 66.667 2.18 0.00 0.00 4.37
239 240 4.722700 CCACTTGCCGGGTCTGGG 62.723 72.222 2.18 0.00 0.00 4.45
241 242 2.859273 CTAGCCACTTGCCGGGTCTG 62.859 65.000 2.18 0.00 42.71 3.51
242 243 2.606519 TAGCCACTTGCCGGGTCT 60.607 61.111 2.18 0.00 42.71 3.85
243 244 2.125106 CTAGCCACTTGCCGGGTC 60.125 66.667 2.18 0.00 42.71 4.46
244 245 3.717294 CCTAGCCACTTGCCGGGT 61.717 66.667 2.18 0.00 42.71 5.28
245 246 3.268103 AACCTAGCCACTTGCCGGG 62.268 63.158 2.18 0.00 42.71 5.73
246 247 2.040544 CAACCTAGCCACTTGCCGG 61.041 63.158 0.00 0.00 42.71 6.13
247 248 2.040544 CCAACCTAGCCACTTGCCG 61.041 63.158 0.00 0.00 42.71 5.69
248 249 1.678970 CCCAACCTAGCCACTTGCC 60.679 63.158 0.00 0.00 42.71 4.52
249 250 1.678970 CCCCAACCTAGCCACTTGC 60.679 63.158 0.00 0.00 41.71 4.01
250 251 0.322546 GACCCCAACCTAGCCACTTG 60.323 60.000 0.00 0.00 0.00 3.16
251 252 0.475828 AGACCCCAACCTAGCCACTT 60.476 55.000 0.00 0.00 0.00 3.16
252 253 0.910088 GAGACCCCAACCTAGCCACT 60.910 60.000 0.00 0.00 0.00 4.00
253 254 1.602771 GAGACCCCAACCTAGCCAC 59.397 63.158 0.00 0.00 0.00 5.01
254 255 1.987855 CGAGACCCCAACCTAGCCA 60.988 63.158 0.00 0.00 0.00 4.75
255 256 2.732619 CCGAGACCCCAACCTAGCC 61.733 68.421 0.00 0.00 0.00 3.93
256 257 2.732619 CCCGAGACCCCAACCTAGC 61.733 68.421 0.00 0.00 0.00 3.42
257 258 1.305887 ACCCGAGACCCCAACCTAG 60.306 63.158 0.00 0.00 0.00 3.02
258 259 1.305549 GACCCGAGACCCCAACCTA 60.306 63.158 0.00 0.00 0.00 3.08
259 260 2.606826 GACCCGAGACCCCAACCT 60.607 66.667 0.00 0.00 0.00 3.50
260 261 0.906282 TAAGACCCGAGACCCCAACC 60.906 60.000 0.00 0.00 0.00 3.77
261 262 0.535797 CTAAGACCCGAGACCCCAAC 59.464 60.000 0.00 0.00 0.00 3.77
262 263 0.410663 TCTAAGACCCGAGACCCCAA 59.589 55.000 0.00 0.00 0.00 4.12
263 264 0.635009 ATCTAAGACCCGAGACCCCA 59.365 55.000 0.00 0.00 0.00 4.96
264 265 1.041437 CATCTAAGACCCGAGACCCC 58.959 60.000 0.00 0.00 0.00 4.95
265 266 1.777941 ACATCTAAGACCCGAGACCC 58.222 55.000 0.00 0.00 0.00 4.46
266 267 3.318557 CCTAACATCTAAGACCCGAGACC 59.681 52.174 0.00 0.00 0.00 3.85
267 268 3.243468 GCCTAACATCTAAGACCCGAGAC 60.243 52.174 0.00 0.00 0.00 3.36
268 269 2.957006 GCCTAACATCTAAGACCCGAGA 59.043 50.000 0.00 0.00 0.00 4.04
269 270 2.959707 AGCCTAACATCTAAGACCCGAG 59.040 50.000 0.00 0.00 0.00 4.63
270 271 3.028094 AGCCTAACATCTAAGACCCGA 57.972 47.619 0.00 0.00 0.00 5.14
271 272 3.458189 CAAGCCTAACATCTAAGACCCG 58.542 50.000 0.00 0.00 0.00 5.28
272 273 3.809905 CCAAGCCTAACATCTAAGACCC 58.190 50.000 0.00 0.00 0.00 4.46
273 274 3.118223 AGCCAAGCCTAACATCTAAGACC 60.118 47.826 0.00 0.00 0.00 3.85
274 275 3.873952 CAGCCAAGCCTAACATCTAAGAC 59.126 47.826 0.00 0.00 0.00 3.01
275 276 3.682718 GCAGCCAAGCCTAACATCTAAGA 60.683 47.826 0.00 0.00 0.00 2.10
276 277 2.615912 GCAGCCAAGCCTAACATCTAAG 59.384 50.000 0.00 0.00 0.00 2.18
277 278 2.643551 GCAGCCAAGCCTAACATCTAA 58.356 47.619 0.00 0.00 0.00 2.10
278 279 1.473257 CGCAGCCAAGCCTAACATCTA 60.473 52.381 0.00 0.00 0.00 1.98
279 280 0.745845 CGCAGCCAAGCCTAACATCT 60.746 55.000 0.00 0.00 0.00 2.90
280 281 0.744414 TCGCAGCCAAGCCTAACATC 60.744 55.000 0.00 0.00 0.00 3.06
281 282 0.107017 ATCGCAGCCAAGCCTAACAT 60.107 50.000 0.00 0.00 0.00 2.71
282 283 1.026182 CATCGCAGCCAAGCCTAACA 61.026 55.000 0.00 0.00 0.00 2.41
283 284 1.026718 ACATCGCAGCCAAGCCTAAC 61.027 55.000 0.00 0.00 0.00 2.34
284 285 0.744414 GACATCGCAGCCAAGCCTAA 60.744 55.000 0.00 0.00 0.00 2.69
285 286 1.153369 GACATCGCAGCCAAGCCTA 60.153 57.895 0.00 0.00 0.00 3.93
286 287 2.437359 GACATCGCAGCCAAGCCT 60.437 61.111 0.00 0.00 0.00 4.58
287 288 2.437359 AGACATCGCAGCCAAGCC 60.437 61.111 0.00 0.00 0.00 4.35
288 289 2.806856 CGAGACATCGCAGCCAAGC 61.807 63.158 0.00 0.00 42.97 4.01
289 290 3.392431 CGAGACATCGCAGCCAAG 58.608 61.111 0.00 0.00 42.97 3.61
298 299 4.657436 AACATCTAAGACCCGAGACATC 57.343 45.455 0.00 0.00 0.00 3.06
299 300 4.585162 CCTAACATCTAAGACCCGAGACAT 59.415 45.833 0.00 0.00 0.00 3.06
300 301 3.952323 CCTAACATCTAAGACCCGAGACA 59.048 47.826 0.00 0.00 0.00 3.41
301 302 3.243468 GCCTAACATCTAAGACCCGAGAC 60.243 52.174 0.00 0.00 0.00 3.36
302 303 2.957006 GCCTAACATCTAAGACCCGAGA 59.043 50.000 0.00 0.00 0.00 4.04
303 304 2.959707 AGCCTAACATCTAAGACCCGAG 59.040 50.000 0.00 0.00 0.00 4.63
304 305 3.028094 AGCCTAACATCTAAGACCCGA 57.972 47.619 0.00 0.00 0.00 5.14
305 306 3.458189 CAAGCCTAACATCTAAGACCCG 58.542 50.000 0.00 0.00 0.00 5.28
306 307 3.809905 CCAAGCCTAACATCTAAGACCC 58.190 50.000 0.00 0.00 0.00 4.46
307 308 3.118223 AGCCAAGCCTAACATCTAAGACC 60.118 47.826 0.00 0.00 0.00 3.85
308 309 3.873952 CAGCCAAGCCTAACATCTAAGAC 59.126 47.826 0.00 0.00 0.00 3.01
309 310 3.682718 GCAGCCAAGCCTAACATCTAAGA 60.683 47.826 0.00 0.00 0.00 2.10
310 311 2.615912 GCAGCCAAGCCTAACATCTAAG 59.384 50.000 0.00 0.00 0.00 2.18
311 312 2.643551 GCAGCCAAGCCTAACATCTAA 58.356 47.619 0.00 0.00 0.00 2.10
312 313 1.473257 CGCAGCCAAGCCTAACATCTA 60.473 52.381 0.00 0.00 0.00 1.98
313 314 0.745845 CGCAGCCAAGCCTAACATCT 60.746 55.000 0.00 0.00 0.00 2.90
314 315 0.744414 TCGCAGCCAAGCCTAACATC 60.744 55.000 0.00 0.00 0.00 3.06
315 316 0.107017 ATCGCAGCCAAGCCTAACAT 60.107 50.000 0.00 0.00 0.00 2.71
316 317 1.026182 CATCGCAGCCAAGCCTAACA 61.026 55.000 0.00 0.00 0.00 2.41
317 318 1.026718 ACATCGCAGCCAAGCCTAAC 61.027 55.000 0.00 0.00 0.00 2.34
318 319 0.744414 GACATCGCAGCCAAGCCTAA 60.744 55.000 0.00 0.00 0.00 2.69
319 320 1.153369 GACATCGCAGCCAAGCCTA 60.153 57.895 0.00 0.00 0.00 3.93
320 321 2.437359 GACATCGCAGCCAAGCCT 60.437 61.111 0.00 0.00 0.00 4.58
321 322 2.437359 AGACATCGCAGCCAAGCC 60.437 61.111 0.00 0.00 0.00 4.35
322 323 2.806856 CGAGACATCGCAGCCAAGC 61.807 63.158 0.00 0.00 42.97 4.01
323 324 3.392431 CGAGACATCGCAGCCAAG 58.608 61.111 0.00 0.00 42.97 3.61
332 333 4.657436 AACATCTAAGACCCGAGACATC 57.343 45.455 0.00 0.00 0.00 3.06
333 334 4.585162 CCTAACATCTAAGACCCGAGACAT 59.415 45.833 0.00 0.00 0.00 3.06
334 335 3.952323 CCTAACATCTAAGACCCGAGACA 59.048 47.826 0.00 0.00 0.00 3.41
335 336 3.243468 GCCTAACATCTAAGACCCGAGAC 60.243 52.174 0.00 0.00 0.00 3.36
336 337 2.957006 GCCTAACATCTAAGACCCGAGA 59.043 50.000 0.00 0.00 0.00 4.04
337 338 2.959707 AGCCTAACATCTAAGACCCGAG 59.040 50.000 0.00 0.00 0.00 4.63
338 339 3.028094 AGCCTAACATCTAAGACCCGA 57.972 47.619 0.00 0.00 0.00 5.14
339 340 3.458189 CAAGCCTAACATCTAAGACCCG 58.542 50.000 0.00 0.00 0.00 5.28
340 341 3.809905 CCAAGCCTAACATCTAAGACCC 58.190 50.000 0.00 0.00 0.00 4.46
341 342 3.118223 AGCCAAGCCTAACATCTAAGACC 60.118 47.826 0.00 0.00 0.00 3.85
342 343 3.873952 CAGCCAAGCCTAACATCTAAGAC 59.126 47.826 0.00 0.00 0.00 3.01
343 344 3.682718 GCAGCCAAGCCTAACATCTAAGA 60.683 47.826 0.00 0.00 0.00 2.10
344 345 2.615912 GCAGCCAAGCCTAACATCTAAG 59.384 50.000 0.00 0.00 0.00 2.18
345 346 2.643551 GCAGCCAAGCCTAACATCTAA 58.356 47.619 0.00 0.00 0.00 2.10
346 347 1.473257 CGCAGCCAAGCCTAACATCTA 60.473 52.381 0.00 0.00 0.00 1.98
347 348 0.745845 CGCAGCCAAGCCTAACATCT 60.746 55.000 0.00 0.00 0.00 2.90
348 349 0.744414 TCGCAGCCAAGCCTAACATC 60.744 55.000 0.00 0.00 0.00 3.06
349 350 0.107017 ATCGCAGCCAAGCCTAACAT 60.107 50.000 0.00 0.00 0.00 2.71
350 351 1.026182 CATCGCAGCCAAGCCTAACA 61.026 55.000 0.00 0.00 0.00 2.41
351 352 1.026718 ACATCGCAGCCAAGCCTAAC 61.027 55.000 0.00 0.00 0.00 2.34
352 353 0.744414 GACATCGCAGCCAAGCCTAA 60.744 55.000 0.00 0.00 0.00 2.69
353 354 1.153369 GACATCGCAGCCAAGCCTA 60.153 57.895 0.00 0.00 0.00 3.93
354 355 2.437359 GACATCGCAGCCAAGCCT 60.437 61.111 0.00 0.00 0.00 4.58
355 356 2.437359 AGACATCGCAGCCAAGCC 60.437 61.111 0.00 0.00 0.00 4.35
356 357 2.806856 CGAGACATCGCAGCCAAGC 61.807 63.158 0.00 0.00 42.97 4.01
357 358 3.392431 CGAGACATCGCAGCCAAG 58.608 61.111 0.00 0.00 42.97 3.61
366 367 4.657436 AACATCTAAGACCCGAGACATC 57.343 45.455 0.00 0.00 0.00 3.06
367 368 4.585162 CCTAACATCTAAGACCCGAGACAT 59.415 45.833 0.00 0.00 0.00 3.06
368 369 3.952323 CCTAACATCTAAGACCCGAGACA 59.048 47.826 0.00 0.00 0.00 3.41
369 370 3.243468 GCCTAACATCTAAGACCCGAGAC 60.243 52.174 0.00 0.00 0.00 3.36
370 371 2.957006 GCCTAACATCTAAGACCCGAGA 59.043 50.000 0.00 0.00 0.00 4.04
371 372 2.959707 AGCCTAACATCTAAGACCCGAG 59.040 50.000 0.00 0.00 0.00 4.63
372 373 3.028094 AGCCTAACATCTAAGACCCGA 57.972 47.619 0.00 0.00 0.00 5.14
373 374 3.458189 CAAGCCTAACATCTAAGACCCG 58.542 50.000 0.00 0.00 0.00 5.28
374 375 3.809905 CCAAGCCTAACATCTAAGACCC 58.190 50.000 0.00 0.00 0.00 4.46
375 376 3.118223 AGCCAAGCCTAACATCTAAGACC 60.118 47.826 0.00 0.00 0.00 3.85
376 377 3.873952 CAGCCAAGCCTAACATCTAAGAC 59.126 47.826 0.00 0.00 0.00 3.01
377 378 3.682718 GCAGCCAAGCCTAACATCTAAGA 60.683 47.826 0.00 0.00 0.00 2.10
378 379 2.615912 GCAGCCAAGCCTAACATCTAAG 59.384 50.000 0.00 0.00 0.00 2.18
379 380 2.643551 GCAGCCAAGCCTAACATCTAA 58.356 47.619 0.00 0.00 0.00 2.10
380 381 1.473257 CGCAGCCAAGCCTAACATCTA 60.473 52.381 0.00 0.00 0.00 1.98
381 382 0.745845 CGCAGCCAAGCCTAACATCT 60.746 55.000 0.00 0.00 0.00 2.90
382 383 0.744414 TCGCAGCCAAGCCTAACATC 60.744 55.000 0.00 0.00 0.00 3.06
383 384 0.107017 ATCGCAGCCAAGCCTAACAT 60.107 50.000 0.00 0.00 0.00 2.71
384 385 1.026182 CATCGCAGCCAAGCCTAACA 61.026 55.000 0.00 0.00 0.00 2.41
385 386 1.026718 ACATCGCAGCCAAGCCTAAC 61.027 55.000 0.00 0.00 0.00 2.34
386 387 0.744414 GACATCGCAGCCAAGCCTAA 60.744 55.000 0.00 0.00 0.00 2.69
387 388 1.153369 GACATCGCAGCCAAGCCTA 60.153 57.895 0.00 0.00 0.00 3.93
388 389 2.437359 GACATCGCAGCCAAGCCT 60.437 61.111 0.00 0.00 0.00 4.58
389 390 2.437359 AGACATCGCAGCCAAGCC 60.437 61.111 0.00 0.00 0.00 4.35
390 391 1.023513 AAGAGACATCGCAGCCAAGC 61.024 55.000 0.00 0.00 0.00 4.01
391 392 1.129998 CAAAGAGACATCGCAGCCAAG 59.870 52.381 0.00 0.00 0.00 3.61
392 393 1.159285 CAAAGAGACATCGCAGCCAA 58.841 50.000 0.00 0.00 0.00 4.52
393 394 0.674581 CCAAAGAGACATCGCAGCCA 60.675 55.000 0.00 0.00 0.00 4.75
394 395 0.674895 ACCAAAGAGACATCGCAGCC 60.675 55.000 0.00 0.00 0.00 4.85
395 396 2.010145 TACCAAAGAGACATCGCAGC 57.990 50.000 0.00 0.00 0.00 5.25
396 397 4.747108 CCTAATACCAAAGAGACATCGCAG 59.253 45.833 0.00 0.00 0.00 5.18
397 398 4.693283 CCTAATACCAAAGAGACATCGCA 58.307 43.478 0.00 0.00 0.00 5.10
398 399 3.495001 GCCTAATACCAAAGAGACATCGC 59.505 47.826 0.00 0.00 0.00 4.58
399 400 4.058817 GGCCTAATACCAAAGAGACATCG 58.941 47.826 0.00 0.00 0.00 3.84
400 401 4.141482 TGGGCCTAATACCAAAGAGACATC 60.141 45.833 4.53 0.00 32.89 3.06
401 402 3.785887 TGGGCCTAATACCAAAGAGACAT 59.214 43.478 4.53 0.00 32.89 3.06
402 403 3.186283 TGGGCCTAATACCAAAGAGACA 58.814 45.455 4.53 0.00 32.89 3.41
403 404 3.433740 CCTGGGCCTAATACCAAAGAGAC 60.434 52.174 4.53 0.00 36.09 3.36
404 405 2.777692 CCTGGGCCTAATACCAAAGAGA 59.222 50.000 4.53 0.00 36.09 3.10
405 406 2.749800 GCCTGGGCCTAATACCAAAGAG 60.750 54.545 4.53 0.00 36.09 2.85
406 407 1.214424 GCCTGGGCCTAATACCAAAGA 59.786 52.381 4.53 0.00 36.09 2.52
407 408 1.215423 AGCCTGGGCCTAATACCAAAG 59.785 52.381 4.53 0.00 43.17 2.77
408 409 1.304891 AGCCTGGGCCTAATACCAAA 58.695 50.000 4.53 0.00 43.17 3.28
409 410 2.199927 TAGCCTGGGCCTAATACCAA 57.800 50.000 4.53 0.00 43.17 3.67
410 411 2.158004 AGATAGCCTGGGCCTAATACCA 60.158 50.000 4.53 0.00 43.17 3.25
411 412 2.237392 CAGATAGCCTGGGCCTAATACC 59.763 54.545 4.53 0.00 43.17 2.73
412 413 2.355209 GCAGATAGCCTGGGCCTAATAC 60.355 54.545 4.53 0.00 43.13 1.89
413 414 1.909302 GCAGATAGCCTGGGCCTAATA 59.091 52.381 4.53 0.00 43.13 0.98
414 415 0.695347 GCAGATAGCCTGGGCCTAAT 59.305 55.000 4.53 0.00 43.13 1.73
415 416 1.758440 CGCAGATAGCCTGGGCCTAA 61.758 60.000 4.53 0.00 46.58 2.69
416 417 2.210013 CGCAGATAGCCTGGGCCTA 61.210 63.158 4.53 0.00 46.58 3.93
417 418 3.554342 CGCAGATAGCCTGGGCCT 61.554 66.667 4.53 0.00 46.58 5.19
425 426 0.952984 GATGAAGGGGCGCAGATAGC 60.953 60.000 10.83 0.00 40.87 2.97
426 427 0.394192 TGATGAAGGGGCGCAGATAG 59.606 55.000 10.83 0.00 0.00 2.08
427 428 0.836606 TTGATGAAGGGGCGCAGATA 59.163 50.000 10.83 0.00 0.00 1.98
428 429 0.749454 GTTGATGAAGGGGCGCAGAT 60.749 55.000 10.83 0.00 0.00 2.90
429 430 1.377202 GTTGATGAAGGGGCGCAGA 60.377 57.895 10.83 0.00 0.00 4.26
430 431 1.377725 AGTTGATGAAGGGGCGCAG 60.378 57.895 10.83 0.00 0.00 5.18
431 432 1.675310 CAGTTGATGAAGGGGCGCA 60.675 57.895 10.83 0.00 0.00 6.09
432 433 2.409870 CCAGTTGATGAAGGGGCGC 61.410 63.158 0.00 0.00 0.00 6.53
433 434 0.107017 ATCCAGTTGATGAAGGGGCG 60.107 55.000 0.00 0.00 30.54 6.13
434 435 2.487986 CCTATCCAGTTGATGAAGGGGC 60.488 54.545 0.00 0.00 34.76 5.80
435 436 2.780010 ACCTATCCAGTTGATGAAGGGG 59.220 50.000 0.00 0.00 34.76 4.79
436 437 3.200825 ACACCTATCCAGTTGATGAAGGG 59.799 47.826 0.00 0.00 34.76 3.95
437 438 4.494091 ACACCTATCCAGTTGATGAAGG 57.506 45.455 0.00 0.00 34.76 3.46
438 439 5.053145 GCTACACCTATCCAGTTGATGAAG 58.947 45.833 0.00 0.00 34.76 3.02
439 440 4.441495 CGCTACACCTATCCAGTTGATGAA 60.441 45.833 0.00 0.00 34.76 2.57
440 441 3.068165 CGCTACACCTATCCAGTTGATGA 59.932 47.826 0.00 0.00 34.76 2.92
441 442 3.068165 TCGCTACACCTATCCAGTTGATG 59.932 47.826 0.00 0.00 34.76 3.07
442 443 3.068307 GTCGCTACACCTATCCAGTTGAT 59.932 47.826 0.00 0.00 37.49 2.57
443 444 2.426024 GTCGCTACACCTATCCAGTTGA 59.574 50.000 0.00 0.00 0.00 3.18
444 445 2.165641 TGTCGCTACACCTATCCAGTTG 59.834 50.000 0.00 0.00 0.00 3.16
445 446 2.427453 CTGTCGCTACACCTATCCAGTT 59.573 50.000 0.00 0.00 0.00 3.16
446 447 2.025155 CTGTCGCTACACCTATCCAGT 58.975 52.381 0.00 0.00 0.00 4.00
447 448 2.025155 ACTGTCGCTACACCTATCCAG 58.975 52.381 0.00 0.00 0.00 3.86
448 449 2.139323 ACTGTCGCTACACCTATCCA 57.861 50.000 0.00 0.00 0.00 3.41
449 450 3.187700 CAAACTGTCGCTACACCTATCC 58.812 50.000 0.00 0.00 0.00 2.59
450 451 3.846360 ACAAACTGTCGCTACACCTATC 58.154 45.455 0.00 0.00 0.00 2.08
451 452 3.955650 ACAAACTGTCGCTACACCTAT 57.044 42.857 0.00 0.00 0.00 2.57
452 453 3.386486 CAACAAACTGTCGCTACACCTA 58.614 45.455 0.00 0.00 0.00 3.08
453 454 2.210116 CAACAAACTGTCGCTACACCT 58.790 47.619 0.00 0.00 0.00 4.00
454 455 1.333791 GCAACAAACTGTCGCTACACC 60.334 52.381 0.00 0.00 25.48 4.16
455 456 1.597663 AGCAACAAACTGTCGCTACAC 59.402 47.619 0.00 0.00 39.13 2.90
456 457 1.948104 AGCAACAAACTGTCGCTACA 58.052 45.000 0.00 0.00 39.13 2.74
457 458 3.739300 TCTAAGCAACAAACTGTCGCTAC 59.261 43.478 0.00 0.00 40.17 3.58
458 459 3.739300 GTCTAAGCAACAAACTGTCGCTA 59.261 43.478 0.00 0.00 40.17 4.26
459 460 2.544267 GTCTAAGCAACAAACTGTCGCT 59.456 45.455 0.00 0.00 43.41 4.93
460 461 2.659291 CGTCTAAGCAACAAACTGTCGC 60.659 50.000 0.00 0.00 28.57 5.19
461 462 2.096909 CCGTCTAAGCAACAAACTGTCG 60.097 50.000 0.00 0.00 0.00 4.35
462 463 2.349532 GCCGTCTAAGCAACAAACTGTC 60.350 50.000 0.00 0.00 0.00 3.51
463 464 1.602377 GCCGTCTAAGCAACAAACTGT 59.398 47.619 0.00 0.00 0.00 3.55
464 465 1.398451 CGCCGTCTAAGCAACAAACTG 60.398 52.381 0.00 0.00 0.00 3.16
465 466 0.865769 CGCCGTCTAAGCAACAAACT 59.134 50.000 0.00 0.00 0.00 2.66
466 467 0.110373 CCGCCGTCTAAGCAACAAAC 60.110 55.000 0.00 0.00 0.00 2.93
467 468 1.847890 GCCGCCGTCTAAGCAACAAA 61.848 55.000 0.00 0.00 0.00 2.83
468 469 2.322081 GCCGCCGTCTAAGCAACAA 61.322 57.895 0.00 0.00 0.00 2.83
469 470 2.725203 AAGCCGCCGTCTAAGCAACA 62.725 55.000 0.00 0.00 0.00 3.33
470 471 1.574702 AAAGCCGCCGTCTAAGCAAC 61.575 55.000 0.00 0.00 0.00 4.17
471 472 0.037139 TAAAGCCGCCGTCTAAGCAA 60.037 50.000 0.00 0.00 0.00 3.91
472 473 0.459585 CTAAAGCCGCCGTCTAAGCA 60.460 55.000 0.00 0.00 0.00 3.91
473 474 0.459759 ACTAAAGCCGCCGTCTAAGC 60.460 55.000 0.00 0.00 0.00 3.09
474 475 1.134560 AGACTAAAGCCGCCGTCTAAG 59.865 52.381 0.00 0.00 35.15 2.18
475 476 1.180029 AGACTAAAGCCGCCGTCTAA 58.820 50.000 0.00 0.00 35.15 2.10
476 477 1.180029 AAGACTAAAGCCGCCGTCTA 58.820 50.000 0.00 0.00 35.82 2.59
477 478 1.135170 GTAAGACTAAAGCCGCCGTCT 60.135 52.381 0.00 0.00 38.29 4.18
478 479 1.135170 AGTAAGACTAAAGCCGCCGTC 60.135 52.381 0.00 0.00 0.00 4.79
479 480 0.893447 AGTAAGACTAAAGCCGCCGT 59.107 50.000 0.00 0.00 0.00 5.68
480 481 1.278238 CAGTAAGACTAAAGCCGCCG 58.722 55.000 0.00 0.00 0.00 6.46
481 482 2.381725 ACAGTAAGACTAAAGCCGCC 57.618 50.000 0.00 0.00 0.00 6.13
482 483 3.064931 ACAACAGTAAGACTAAAGCCGC 58.935 45.455 0.00 0.00 0.00 6.53
483 484 6.034683 GTCATACAACAGTAAGACTAAAGCCG 59.965 42.308 4.35 0.00 34.99 5.52
484 485 7.097834 AGTCATACAACAGTAAGACTAAAGCC 58.902 38.462 10.67 0.00 42.02 4.35
485 486 8.535690 AAGTCATACAACAGTAAGACTAAAGC 57.464 34.615 12.21 0.00 42.62 3.51
487 488 9.826574 ACAAAGTCATACAACAGTAAGACTAAA 57.173 29.630 12.21 0.00 42.62 1.85
490 491 9.477484 CTTACAAAGTCATACAACAGTAAGACT 57.523 33.333 7.48 7.48 44.26 3.24
491 492 8.709646 CCTTACAAAGTCATACAACAGTAAGAC 58.290 37.037 0.00 3.57 39.45 3.01
492 493 8.426489 ACCTTACAAAGTCATACAACAGTAAGA 58.574 33.333 0.00 0.00 39.45 2.10
493 494 8.603242 ACCTTACAAAGTCATACAACAGTAAG 57.397 34.615 0.00 0.00 37.80 2.34
494 495 8.426489 AGACCTTACAAAGTCATACAACAGTAA 58.574 33.333 0.00 0.00 0.00 2.24
495 496 7.959175 AGACCTTACAAAGTCATACAACAGTA 58.041 34.615 0.00 0.00 0.00 2.74
496 497 6.827727 AGACCTTACAAAGTCATACAACAGT 58.172 36.000 0.00 0.00 0.00 3.55
497 498 7.226720 ACAAGACCTTACAAAGTCATACAACAG 59.773 37.037 0.00 0.00 0.00 3.16
498 499 7.011950 CACAAGACCTTACAAAGTCATACAACA 59.988 37.037 0.00 0.00 0.00 3.33
499 500 7.225931 TCACAAGACCTTACAAAGTCATACAAC 59.774 37.037 0.00 0.00 0.00 3.32
500 501 7.276658 TCACAAGACCTTACAAAGTCATACAA 58.723 34.615 0.00 0.00 0.00 2.41
501 502 6.822442 TCACAAGACCTTACAAAGTCATACA 58.178 36.000 0.00 0.00 0.00 2.29
502 503 7.152645 TCTCACAAGACCTTACAAAGTCATAC 58.847 38.462 0.00 0.00 0.00 2.39
503 504 7.297936 TCTCACAAGACCTTACAAAGTCATA 57.702 36.000 0.00 0.00 0.00 2.15
504 505 6.174720 TCTCACAAGACCTTACAAAGTCAT 57.825 37.500 0.00 0.00 0.00 3.06
505 506 5.607939 TCTCACAAGACCTTACAAAGTCA 57.392 39.130 0.00 0.00 0.00 3.41
506 507 8.603242 TTATTCTCACAAGACCTTACAAAGTC 57.397 34.615 0.00 0.00 0.00 3.01
507 508 9.574516 AATTATTCTCACAAGACCTTACAAAGT 57.425 29.630 0.00 0.00 0.00 2.66
520 521 9.781834 CGGCAACTTTATTAATTATTCTCACAA 57.218 29.630 0.00 0.00 0.00 3.33
521 522 8.952278 ACGGCAACTTTATTAATTATTCTCACA 58.048 29.630 0.00 0.00 0.00 3.58
525 526 9.893305 GCATACGGCAACTTTATTAATTATTCT 57.107 29.630 0.00 0.00 43.97 2.40
544 545 1.004560 ATCTGGGCGATGCATACGG 60.005 57.895 16.56 6.65 0.00 4.02
545 546 2.156542 CATCTGGGCGATGCATACG 58.843 57.895 0.00 6.68 42.75 3.06
552 553 2.827423 CCTCTGCATCTGGGCGAT 59.173 61.111 0.00 0.00 36.28 4.58
553 554 4.166888 GCCTCTGCATCTGGGCGA 62.167 66.667 0.00 0.00 37.47 5.54
556 557 4.559063 CCGGCCTCTGCATCTGGG 62.559 72.222 0.00 0.00 40.13 4.45
557 558 4.559063 CCCGGCCTCTGCATCTGG 62.559 72.222 0.00 0.00 40.13 3.86
558 559 4.559063 CCCCGGCCTCTGCATCTG 62.559 72.222 0.00 0.00 40.13 2.90
564 565 3.866582 GATGACCCCCGGCCTCTG 61.867 72.222 0.00 0.00 0.00 3.35
570 571 1.571773 AAAAGGAGGATGACCCCCGG 61.572 60.000 0.00 0.00 36.73 5.73
571 572 0.107165 GAAAAGGAGGATGACCCCCG 60.107 60.000 0.00 0.00 36.73 5.73
572 573 1.299939 AGAAAAGGAGGATGACCCCC 58.700 55.000 0.00 0.00 36.73 5.40
573 574 4.586306 TTTAGAAAAGGAGGATGACCCC 57.414 45.455 0.00 0.00 36.73 4.95
615 616 3.749609 GTGGGTACGTATGTCAGCTTTTT 59.250 43.478 0.00 0.00 0.00 1.94
616 617 3.007614 AGTGGGTACGTATGTCAGCTTTT 59.992 43.478 0.00 0.00 0.00 2.27
617 618 2.565834 AGTGGGTACGTATGTCAGCTTT 59.434 45.455 0.00 0.00 0.00 3.51
618 619 2.176889 AGTGGGTACGTATGTCAGCTT 58.823 47.619 0.00 0.00 0.00 3.74
619 620 1.848652 AGTGGGTACGTATGTCAGCT 58.151 50.000 0.00 0.00 0.00 4.24
620 621 2.667473 AAGTGGGTACGTATGTCAGC 57.333 50.000 0.00 0.00 0.00 4.26
621 622 4.303086 CCTAAGTGGGTACGTATGTCAG 57.697 50.000 0.00 0.00 0.00 3.51
634 635 2.123428 GCATGCAGCCCCTAAGTGG 61.123 63.158 14.21 0.00 37.23 4.00
635 636 0.754217 ATGCATGCAGCCCCTAAGTG 60.754 55.000 26.69 0.00 44.83 3.16
636 637 0.466922 GATGCATGCAGCCCCTAAGT 60.467 55.000 25.21 4.28 44.83 2.24
637 638 0.466739 TGATGCATGCAGCCCCTAAG 60.467 55.000 31.30 0.00 44.83 2.18
638 639 0.752743 GTGATGCATGCAGCCCCTAA 60.753 55.000 31.30 11.21 44.83 2.69
639 640 1.152902 GTGATGCATGCAGCCCCTA 60.153 57.895 31.30 11.61 44.83 3.53
640 641 2.441532 GTGATGCATGCAGCCCCT 60.442 61.111 31.30 12.25 44.83 4.79
641 642 2.441532 AGTGATGCATGCAGCCCC 60.442 61.111 31.30 21.66 44.83 5.80
642 643 1.453379 AGAGTGATGCATGCAGCCC 60.453 57.895 31.30 21.81 44.83 5.19
643 644 0.746923 TCAGAGTGATGCATGCAGCC 60.747 55.000 31.30 22.08 44.83 4.85
644 645 1.002359 CATCAGAGTGATGCATGCAGC 60.002 52.381 28.44 28.44 46.37 5.25
658 659 0.468214 CCTCCGGCCTCTACATCAGA 60.468 60.000 0.00 0.00 0.00 3.27
659 660 0.757188 ACCTCCGGCCTCTACATCAG 60.757 60.000 0.00 0.00 0.00 2.90
660 661 0.554305 TACCTCCGGCCTCTACATCA 59.446 55.000 0.00 0.00 0.00 3.07
661 662 1.249407 CTACCTCCGGCCTCTACATC 58.751 60.000 0.00 0.00 0.00 3.06
662 663 0.556747 ACTACCTCCGGCCTCTACAT 59.443 55.000 0.00 0.00 0.00 2.29
663 664 0.106819 GACTACCTCCGGCCTCTACA 60.107 60.000 0.00 0.00 0.00 2.74
664 665 0.822944 GGACTACCTCCGGCCTCTAC 60.823 65.000 0.00 0.00 0.00 2.59
665 666 0.992431 AGGACTACCTCCGGCCTCTA 60.992 60.000 0.00 0.00 44.13 2.43
666 667 2.279408 GGACTACCTCCGGCCTCT 59.721 66.667 0.00 0.00 0.00 3.69
667 668 2.279408 AGGACTACCTCCGGCCTC 59.721 66.667 0.00 0.00 44.13 4.70
702 703 8.137437 GCCATTGTAAGTGAGTGCATATATTTT 58.863 33.333 0.00 0.00 0.00 1.82
703 704 7.255590 GGCCATTGTAAGTGAGTGCATATATTT 60.256 37.037 0.00 0.00 0.00 1.40
704 705 6.207417 GGCCATTGTAAGTGAGTGCATATATT 59.793 38.462 0.00 0.00 0.00 1.28
705 706 5.707298 GGCCATTGTAAGTGAGTGCATATAT 59.293 40.000 0.00 0.00 0.00 0.86
706 707 5.063204 GGCCATTGTAAGTGAGTGCATATA 58.937 41.667 0.00 0.00 0.00 0.86
712 713 3.005554 CTCAGGCCATTGTAAGTGAGTG 58.994 50.000 5.01 0.00 0.00 3.51
713 714 2.639839 ACTCAGGCCATTGTAAGTGAGT 59.360 45.455 12.81 12.81 39.79 3.41
724 726 8.825774 AGGAAAAATAATTAAAACTCAGGCCAT 58.174 29.630 5.01 0.00 0.00 4.40
753 755 7.901874 TTTTCTCCACGAACGAAATTAAAAG 57.098 32.000 0.14 0.00 0.00 2.27
759 761 3.439129 GGGATTTTCTCCACGAACGAAAT 59.561 43.478 0.14 0.00 46.98 2.17
1028 1036 2.502130 AGGTAGAAGGAGCTTAAGTGGC 59.498 50.000 4.02 0.00 0.00 5.01
1032 1040 2.815478 CGCAGGTAGAAGGAGCTTAAG 58.185 52.381 0.00 0.00 0.00 1.85
1033 1041 2.961526 CGCAGGTAGAAGGAGCTTAA 57.038 50.000 0.00 0.00 0.00 1.85
1068 1076 0.603065 GCTTGATCGGCTGGGTTTTT 59.397 50.000 0.00 0.00 0.00 1.94
1071 1079 2.044946 GGCTTGATCGGCTGGGTT 60.045 61.111 9.73 0.00 0.00 4.11
1073 1081 2.191513 CATGGCTTGATCGGCTGGG 61.192 63.158 9.73 0.00 0.00 4.45
1079 1087 0.820482 TCATGGCCATGGCTTGATCG 60.820 55.000 38.81 15.79 37.36 3.69
1103 1112 4.430765 GACGGGGAAAGCGCGAGA 62.431 66.667 12.10 0.00 0.00 4.04
1112 1121 2.683933 GAGCTCTGGGACGGGGAA 60.684 66.667 6.43 0.00 37.40 3.97
1151 1160 0.998928 TTGGCTTGAAGGAGGGCATA 59.001 50.000 0.00 0.00 35.56 3.14
1176 1185 2.291865 TGACTGATCTAGCAGGACTGGT 60.292 50.000 9.16 9.16 44.31 4.00
1214 1223 1.786937 TCTTCTCCTCCTGCTCATCC 58.213 55.000 0.00 0.00 0.00 3.51
1310 1322 1.142531 CTCATACAGCAGCTCCGCA 59.857 57.895 0.00 0.00 0.00 5.69
1429 1441 9.859427 CATAAGGAAAACTTGCAGATTTCAATA 57.141 29.630 17.31 11.85 38.33 1.90
1431 1443 6.646240 GCATAAGGAAAACTTGCAGATTTCAA 59.354 34.615 17.31 7.37 38.33 2.69
1432 1444 6.015180 AGCATAAGGAAAACTTGCAGATTTCA 60.015 34.615 17.31 3.86 38.33 2.69
1554 1568 0.983378 ACTGAGGGTATGGACAGGGC 60.983 60.000 0.00 0.00 35.08 5.19
1644 1658 6.058183 CCTAACAGTTTATTCTGCCTAGCAT 58.942 40.000 0.00 0.00 38.13 3.79
1717 1731 4.849810 TCAGAGGAAGGATGGGTAGAAAAA 59.150 41.667 0.00 0.00 0.00 1.94
1718 1732 4.435137 TCAGAGGAAGGATGGGTAGAAAA 58.565 43.478 0.00 0.00 0.00 2.29
1728 1742 3.181440 TGTTGTTTGCTCAGAGGAAGGAT 60.181 43.478 4.36 0.00 0.00 3.24
1752 1766 7.916977 TCAGCATTCAGTAACATGATTTATTGC 59.083 33.333 0.00 0.00 0.00 3.56
1813 1827 2.027561 CCAACCTTCCTCCACGTATTCA 60.028 50.000 0.00 0.00 0.00 2.57
2042 2056 5.126067 CACATTACTGTCCTAATCCCTTGG 58.874 45.833 0.00 0.00 31.62 3.61
2222 2242 9.623000 AATACCCCATAATGTTAACTTGTAGTC 57.377 33.333 7.22 0.00 0.00 2.59
2258 2278 2.093764 CCTAGGAGTTGAGGAGCACTTG 60.094 54.545 1.05 0.00 34.46 3.16
2259 2279 2.183679 CCTAGGAGTTGAGGAGCACTT 58.816 52.381 1.05 0.00 34.46 3.16
2326 2346 9.941325 AGGTAAGCAGAATCAATTAGATCTATG 57.059 33.333 2.58 0.00 35.39 2.23
2332 2352 7.445402 GCCATTAGGTAAGCAGAATCAATTAGA 59.555 37.037 0.00 0.00 37.19 2.10
2336 2356 5.533903 CAGCCATTAGGTAAGCAGAATCAAT 59.466 40.000 0.00 0.00 37.19 2.57
2400 2420 3.565764 TCAGATGCAGGGTTTATCTGG 57.434 47.619 10.48 0.00 44.88 3.86
2403 2423 4.454678 TGTCATCAGATGCAGGGTTTATC 58.545 43.478 5.41 0.00 0.00 1.75
2488 2511 3.055094 TGGAAAGTACTCCAGCCAAGATC 60.055 47.826 0.00 0.00 40.71 2.75
2530 2553 3.496884 TGTTTTATGTCAAGAGTGGCGTC 59.503 43.478 0.00 0.00 29.33 5.19
2533 2556 6.446318 TGAAATGTTTTATGTCAAGAGTGGC 58.554 36.000 0.00 0.00 0.00 5.01
2561 2584 4.012374 GTTGCTCATTCTCTGAATCCCAA 58.988 43.478 0.00 0.00 32.14 4.12
2576 2599 0.667487 GCACTACTCGCAGTTGCTCA 60.667 55.000 2.29 0.00 39.32 4.26
2602 2625 5.841957 AATTTGTGAGGATGGCAAGATAC 57.158 39.130 0.00 0.00 0.00 2.24
2653 2676 0.674895 GAGCATTTGTGGAGAGCGGT 60.675 55.000 0.00 0.00 0.00 5.68
2662 2685 3.504906 ACTTGGATCACAGAGCATTTGTG 59.495 43.478 8.45 8.45 45.61 3.33
2749 2772 4.956700 ACTGATCCAGATTCTAGTTTCGGA 59.043 41.667 0.45 1.16 35.18 4.55
2782 2805 6.662234 TCATGAGCTTCAAAGATCCTTTTGAT 59.338 34.615 10.06 0.00 44.12 2.57
2788 2811 6.126825 ACTGTATCATGAGCTTCAAAGATCCT 60.127 38.462 0.09 0.00 40.59 3.24
2899 2922 2.225467 GTTGCATATGAGAGAAGGGCC 58.775 52.381 6.97 0.00 0.00 5.80
2920 2943 1.351017 ACAACCCCAATCGACAGTCAT 59.649 47.619 0.41 0.00 0.00 3.06
2934 2957 1.067582 CTCGGCCTATCGACAACCC 59.932 63.158 0.00 0.00 35.18 4.11
2935 2958 1.067582 CCTCGGCCTATCGACAACC 59.932 63.158 0.00 0.00 35.18 3.77
2936 2959 0.175073 AACCTCGGCCTATCGACAAC 59.825 55.000 0.00 0.00 35.18 3.32
2937 2960 0.458669 GAACCTCGGCCTATCGACAA 59.541 55.000 0.00 0.00 35.18 3.18
2941 2964 1.067582 GTGGAACCTCGGCCTATCG 59.932 63.158 0.00 0.00 0.00 2.92
2989 3012 4.250464 AGTGCATCCATGATTTTGCAAAG 58.750 39.130 12.41 0.00 45.74 2.77


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.