Multiple sequence alignment - TraesCS3D01G327200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G327200 chr3D 100.000 2825 0 0 1 2825 439631747 439634571 0.000000e+00 5217.0
1 TraesCS3D01G327200 chr3D 76.724 116 23 4 352 465 406407693 406407806 8.450000e-06 62.1
2 TraesCS3D01G327200 chr3B 94.130 1857 82 15 460 2295 576303160 576305010 0.000000e+00 2800.0
3 TraesCS3D01G327200 chr3B 93.425 365 23 1 53 417 576302456 576302819 8.900000e-150 540.0
4 TraesCS3D01G327200 chr3B 88.384 198 21 2 2629 2825 8047809 8047613 1.310000e-58 237.0
5 TraesCS3D01G327200 chr3A 96.623 1599 43 6 738 2331 579134754 579136346 0.000000e+00 2643.0
6 TraesCS3D01G327200 chr3A 93.830 470 26 2 2358 2825 594035286 594034818 0.000000e+00 704.0
7 TraesCS3D01G327200 chr1B 96.375 469 15 1 2359 2825 483374717 483375185 0.000000e+00 771.0
8 TraesCS3D01G327200 chr1B 92.140 229 16 1 2358 2586 32760666 32760440 3.510000e-84 322.0
9 TraesCS3D01G327200 chr2B 95.541 471 17 3 2358 2825 689134696 689134227 0.000000e+00 750.0
10 TraesCS3D01G327200 chr2B 95.197 229 11 0 2358 2586 532470520 532470292 2.070000e-96 363.0
11 TraesCS3D01G327200 chr2B 89.091 55 5 1 423 477 488197788 488197735 1.820000e-07 67.6
12 TraesCS3D01G327200 chr4A 95.633 458 20 0 2368 2825 599733296 599733753 0.000000e+00 736.0
13 TraesCS3D01G327200 chr6D 92.123 457 13 3 2371 2825 74132 73697 8.590000e-175 623.0
14 TraesCS3D01G327200 chr6D 91.858 393 26 3 2388 2778 452116156 452116544 6.880000e-151 544.0
15 TraesCS3D01G327200 chr6D 88.945 199 18 4 2629 2825 421048361 421048557 2.810000e-60 243.0
16 TraesCS3D01G327200 chr7A 89.394 198 19 2 2629 2825 656907684 656907880 6.040000e-62 248.0
17 TraesCS3D01G327200 chr5A 94.340 159 9 0 2487 2645 40109237 40109079 7.820000e-61 244.0
18 TraesCS3D01G327200 chr5A 73.453 727 144 37 1095 1786 645127806 645127094 7.870000e-56 228.0
19 TraesCS3D01G327200 chr5D 94.631 149 8 0 2375 2523 443658501 443658649 6.090000e-57 231.0
20 TraesCS3D01G327200 chr2D 90.909 44 2 2 423 466 416399043 416399002 1.090000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G327200 chr3D 439631747 439634571 2824 False 5217 5217 100.0000 1 2825 1 chr3D.!!$F2 2824
1 TraesCS3D01G327200 chr3B 576302456 576305010 2554 False 1670 2800 93.7775 53 2295 2 chr3B.!!$F1 2242
2 TraesCS3D01G327200 chr3A 579134754 579136346 1592 False 2643 2643 96.6230 738 2331 1 chr3A.!!$F1 1593
3 TraesCS3D01G327200 chr5A 645127094 645127806 712 True 228 228 73.4530 1095 1786 1 chr5A.!!$R2 691

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
458 459 0.321996 AGTTTCTTCCTCGCCTCCAC 59.678 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2347 2730 0.107263 TCACCAAGTGTGCAGAAGCA 60.107 50.0 0.0 0.0 45.03 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 2.976356 GGACGACCCAGTACCCAC 59.024 66.667 0.00 0.00 34.14 4.61
31 32 2.570181 GACGACCCAGTACCCACG 59.430 66.667 0.00 0.00 0.00 4.94
32 33 3.637926 GACGACCCAGTACCCACGC 62.638 68.421 0.00 0.00 0.00 5.34
33 34 4.789075 CGACCCAGTACCCACGCG 62.789 72.222 3.53 3.53 0.00 6.01
34 35 3.376078 GACCCAGTACCCACGCGA 61.376 66.667 15.93 0.00 0.00 5.87
35 36 3.352338 GACCCAGTACCCACGCGAG 62.352 68.421 15.93 4.16 0.00 5.03
36 37 4.143333 CCCAGTACCCACGCGAGG 62.143 72.222 15.93 16.16 0.00 4.63
44 45 4.452733 CCACGCGAGGGAGGGAAC 62.453 72.222 15.93 0.00 35.60 3.62
94 95 4.022242 GCTATAAGCGAGATACAACTCCCA 60.022 45.833 0.00 0.00 33.83 4.37
109 110 5.888161 ACAACTCCCATGATAATTCCAGTTC 59.112 40.000 0.00 0.00 0.00 3.01
133 134 5.333364 CGTTGTATAAAAATGTATGCGAGCG 59.667 40.000 0.00 0.00 0.00 5.03
151 152 6.148976 TGCGAGCGTATATTAGTCAGTTATCT 59.851 38.462 0.00 0.00 0.00 1.98
210 211 4.532126 ACCATCTAATAATCATCCAGCGGA 59.468 41.667 0.00 0.00 35.55 5.54
211 212 4.872691 CCATCTAATAATCATCCAGCGGAC 59.127 45.833 0.00 0.00 32.98 4.79
222 223 3.735237 TCCAGCGGACAGAATTAGATC 57.265 47.619 0.00 0.00 0.00 2.75
223 224 3.031013 TCCAGCGGACAGAATTAGATCA 58.969 45.455 0.00 0.00 0.00 2.92
225 226 2.791560 CAGCGGACAGAATTAGATCACG 59.208 50.000 0.00 0.00 0.00 4.35
233 234 3.000322 CAGAATTAGATCACGCACCGTTC 60.000 47.826 0.00 0.00 38.32 3.95
247 248 0.672711 CCGTTCGTCTTTTCCCTCCC 60.673 60.000 0.00 0.00 0.00 4.30
269 270 2.125147 TTCTTCCTCCATGCGGCG 60.125 61.111 0.51 0.51 0.00 6.46
389 390 2.728817 CTACCGCCTCGACCATCC 59.271 66.667 0.00 0.00 0.00 3.51
451 452 5.123936 CCCCCTAATTAAGTTTCTTCCTCG 58.876 45.833 0.00 0.00 0.00 4.63
452 453 4.575236 CCCCTAATTAAGTTTCTTCCTCGC 59.425 45.833 0.00 0.00 0.00 5.03
453 454 4.575236 CCCTAATTAAGTTTCTTCCTCGCC 59.425 45.833 0.00 0.00 0.00 5.54
454 455 5.429130 CCTAATTAAGTTTCTTCCTCGCCT 58.571 41.667 0.00 0.00 0.00 5.52
455 456 5.524281 CCTAATTAAGTTTCTTCCTCGCCTC 59.476 44.000 0.00 0.00 0.00 4.70
456 457 3.329929 TTAAGTTTCTTCCTCGCCTCC 57.670 47.619 0.00 0.00 0.00 4.30
457 458 1.056660 AAGTTTCTTCCTCGCCTCCA 58.943 50.000 0.00 0.00 0.00 3.86
458 459 0.321996 AGTTTCTTCCTCGCCTCCAC 59.678 55.000 0.00 0.00 0.00 4.02
498 797 4.717629 CGCTCGCAAGGTCGTCCA 62.718 66.667 0.51 0.00 35.89 4.02
587 887 2.035066 GTGGTGCAAAGCAGAAAGTGAT 59.965 45.455 0.00 0.00 40.08 3.06
590 890 3.243501 GGTGCAAAGCAGAAAGTGATTCA 60.244 43.478 0.00 0.00 40.08 2.57
591 891 3.732721 GTGCAAAGCAGAAAGTGATTCAC 59.267 43.478 8.82 8.82 40.08 3.18
593 893 4.734402 TGCAAAGCAGAAAGTGATTCACAC 60.734 41.667 18.57 9.45 40.72 3.82
609 911 6.534436 TGATTCACACAACAACAAAATTCAGG 59.466 34.615 0.00 0.00 0.00 3.86
617 919 6.869913 ACAACAACAAAATTCAGGCATATGAG 59.130 34.615 6.97 0.00 0.00 2.90
624 926 8.954350 ACAAAATTCAGGCATATGAGATATAGC 58.046 33.333 6.97 0.00 0.00 2.97
629 931 9.696572 ATTCAGGCATATGAGATATAGCAAAAT 57.303 29.630 6.97 0.00 0.00 1.82
631 933 8.323567 TCAGGCATATGAGATATAGCAAAATCA 58.676 33.333 6.97 0.00 0.00 2.57
686 988 2.761208 AGTTCATAGCGCAAGTACTCCT 59.239 45.455 11.47 0.00 41.68 3.69
694 996 3.119424 AGCGCAAGTACTCCTAAAGAGAC 60.119 47.826 11.47 0.00 42.64 3.36
705 1007 6.698380 ACTCCTAAAGAGACTCGCAAATTTA 58.302 36.000 0.00 0.00 46.50 1.40
707 1009 7.660208 ACTCCTAAAGAGACTCGCAAATTTAAA 59.340 33.333 0.00 0.00 46.50 1.52
714 1016 8.379457 AGAGACTCGCAAATTTAAAAAGTACT 57.621 30.769 0.00 0.00 0.00 2.73
890 1193 1.241315 CCACCAACCTAAGCCAACGG 61.241 60.000 0.00 0.00 0.00 4.44
1090 1393 3.506096 CCGGCGCGTACTCTGAGA 61.506 66.667 12.44 0.00 0.00 3.27
1839 2204 9.848710 ATTAGGATATGATGATCAAGCTTATGG 57.151 33.333 0.00 0.00 0.00 2.74
1878 2244 7.994425 TTGCATTACTGAGATTTTGGAACTA 57.006 32.000 0.00 0.00 0.00 2.24
1942 2308 8.137437 GCCAGTATGCTTTTGTTTGTATGATAT 58.863 33.333 0.00 0.00 31.97 1.63
1943 2309 9.454585 CCAGTATGCTTTTGTTTGTATGATATG 57.545 33.333 0.00 0.00 31.97 1.78
2013 2389 8.752187 AGAAGCAGCATTATTCAGGAATAAAAA 58.248 29.630 16.01 0.00 43.83 1.94
2037 2413 2.599973 GTGTTTGCGGAATTGATGCATC 59.400 45.455 20.14 20.14 38.60 3.91
2043 2419 2.096713 GCGGAATTGATGCATCTACGAC 60.097 50.000 26.32 13.28 0.00 4.34
2175 2558 1.913403 GATTCGCAAACGCTCAAATGG 59.087 47.619 0.00 0.00 39.84 3.16
2224 2607 2.730672 GATCAAGCGCGCGTCAACT 61.731 57.895 32.35 17.09 0.00 3.16
2231 2614 4.681978 GCGCGTCAACTCCCCAGT 62.682 66.667 8.43 0.00 0.00 4.00
2332 2715 3.175240 CGCGCTTGACGGACTGAG 61.175 66.667 5.56 0.00 43.93 3.35
2333 2716 2.258591 GCGCTTGACGGACTGAGA 59.741 61.111 0.00 0.00 43.93 3.27
2334 2717 1.153745 GCGCTTGACGGACTGAGAT 60.154 57.895 0.00 0.00 43.93 2.75
2335 2718 1.142778 GCGCTTGACGGACTGAGATC 61.143 60.000 0.00 0.00 43.93 2.75
2336 2719 0.453793 CGCTTGACGGACTGAGATCT 59.546 55.000 0.00 0.00 38.44 2.75
2337 2720 1.135257 CGCTTGACGGACTGAGATCTT 60.135 52.381 0.00 0.00 38.44 2.40
2338 2721 2.672478 CGCTTGACGGACTGAGATCTTT 60.672 50.000 0.00 0.00 38.44 2.52
2339 2722 2.926838 GCTTGACGGACTGAGATCTTTC 59.073 50.000 0.00 0.00 0.00 2.62
2340 2723 3.615110 GCTTGACGGACTGAGATCTTTCA 60.615 47.826 0.00 0.00 0.00 2.69
2341 2724 4.560128 CTTGACGGACTGAGATCTTTCAA 58.440 43.478 0.00 0.00 0.00 2.69
2342 2725 3.914312 TGACGGACTGAGATCTTTCAAC 58.086 45.455 0.00 0.00 0.00 3.18
2343 2726 3.574396 TGACGGACTGAGATCTTTCAACT 59.426 43.478 0.00 0.00 0.00 3.16
2344 2727 4.039245 TGACGGACTGAGATCTTTCAACTT 59.961 41.667 0.00 0.00 0.00 2.66
2345 2728 4.561105 ACGGACTGAGATCTTTCAACTTC 58.439 43.478 0.00 0.00 0.00 3.01
2346 2729 4.039245 ACGGACTGAGATCTTTCAACTTCA 59.961 41.667 0.00 0.00 0.00 3.02
2347 2730 5.174395 CGGACTGAGATCTTTCAACTTCAT 58.826 41.667 0.00 0.00 0.00 2.57
2348 2731 5.063186 CGGACTGAGATCTTTCAACTTCATG 59.937 44.000 0.00 0.00 0.00 3.07
2349 2732 5.163774 GGACTGAGATCTTTCAACTTCATGC 60.164 44.000 0.00 0.00 0.00 4.06
2350 2733 5.558818 ACTGAGATCTTTCAACTTCATGCT 58.441 37.500 0.00 0.00 0.00 3.79
2351 2734 6.002704 ACTGAGATCTTTCAACTTCATGCTT 58.997 36.000 0.00 0.00 0.00 3.91
2352 2735 6.149142 ACTGAGATCTTTCAACTTCATGCTTC 59.851 38.462 0.00 0.00 0.00 3.86
2353 2736 6.236409 TGAGATCTTTCAACTTCATGCTTCT 58.764 36.000 0.00 0.00 0.00 2.85
2354 2737 6.148976 TGAGATCTTTCAACTTCATGCTTCTG 59.851 38.462 0.00 0.00 0.00 3.02
2355 2738 4.494350 TCTTTCAACTTCATGCTTCTGC 57.506 40.909 0.00 0.00 40.20 4.26
2364 2747 4.984194 TGCTTCTGCACACTTGGT 57.016 50.000 0.00 0.00 45.31 3.67
2380 2763 4.901627 GTGAAGTCACGCTGCAAC 57.098 55.556 0.00 0.00 33.76 4.17
2381 2764 2.311294 GTGAAGTCACGCTGCAACT 58.689 52.632 0.00 0.00 33.76 3.16
2382 2765 0.657840 GTGAAGTCACGCTGCAACTT 59.342 50.000 10.63 10.63 33.76 2.66
2383 2766 1.064060 GTGAAGTCACGCTGCAACTTT 59.936 47.619 11.71 0.00 33.76 2.66
2384 2767 2.286833 GTGAAGTCACGCTGCAACTTTA 59.713 45.455 11.71 6.69 33.76 1.85
2385 2768 2.543848 TGAAGTCACGCTGCAACTTTAG 59.456 45.455 11.71 0.00 33.54 1.85
2386 2769 0.868406 AGTCACGCTGCAACTTTAGC 59.132 50.000 0.00 0.00 36.60 3.09
2387 2770 0.110192 GTCACGCTGCAACTTTAGCC 60.110 55.000 0.00 0.00 36.60 3.93
2388 2771 0.533978 TCACGCTGCAACTTTAGCCA 60.534 50.000 0.00 0.00 36.60 4.75
2389 2772 0.523072 CACGCTGCAACTTTAGCCAT 59.477 50.000 0.00 0.00 36.60 4.40
2390 2773 0.804989 ACGCTGCAACTTTAGCCATC 59.195 50.000 0.00 0.00 36.60 3.51
2391 2774 1.089920 CGCTGCAACTTTAGCCATCT 58.910 50.000 0.00 0.00 36.60 2.90
2392 2775 2.279741 CGCTGCAACTTTAGCCATCTA 58.720 47.619 0.00 0.00 36.60 1.98
2393 2776 2.677836 CGCTGCAACTTTAGCCATCTAA 59.322 45.455 0.00 0.00 36.60 2.10
2394 2777 3.313526 CGCTGCAACTTTAGCCATCTAAT 59.686 43.478 0.00 0.00 36.60 1.73
2395 2778 4.553547 CGCTGCAACTTTAGCCATCTAATC 60.554 45.833 0.00 0.00 36.60 1.75
2396 2779 4.578105 GCTGCAACTTTAGCCATCTAATCT 59.422 41.667 0.00 0.00 34.96 2.40
2397 2780 5.277731 GCTGCAACTTTAGCCATCTAATCTC 60.278 44.000 0.00 0.00 34.96 2.75
2398 2781 5.126067 TGCAACTTTAGCCATCTAATCTCC 58.874 41.667 0.00 0.00 34.96 3.71
2399 2782 5.126067 GCAACTTTAGCCATCTAATCTCCA 58.874 41.667 0.00 0.00 34.96 3.86
2400 2783 5.767168 GCAACTTTAGCCATCTAATCTCCAT 59.233 40.000 0.00 0.00 34.96 3.41
2401 2784 6.072783 GCAACTTTAGCCATCTAATCTCCATC 60.073 42.308 0.00 0.00 34.96 3.51
2402 2785 6.120507 ACTTTAGCCATCTAATCTCCATCC 57.879 41.667 0.00 0.00 34.96 3.51
2403 2786 5.608437 ACTTTAGCCATCTAATCTCCATCCA 59.392 40.000 0.00 0.00 34.96 3.41
2404 2787 6.101734 ACTTTAGCCATCTAATCTCCATCCAA 59.898 38.462 0.00 0.00 34.96 3.53
2405 2788 6.514012 TTAGCCATCTAATCTCCATCCAAA 57.486 37.500 0.00 0.00 30.25 3.28
2406 2789 5.393068 AGCCATCTAATCTCCATCCAAAA 57.607 39.130 0.00 0.00 0.00 2.44
2407 2790 5.136105 AGCCATCTAATCTCCATCCAAAAC 58.864 41.667 0.00 0.00 0.00 2.43
2408 2791 4.889409 GCCATCTAATCTCCATCCAAAACA 59.111 41.667 0.00 0.00 0.00 2.83
2409 2792 5.221126 GCCATCTAATCTCCATCCAAAACAC 60.221 44.000 0.00 0.00 0.00 3.32
2410 2793 5.887598 CCATCTAATCTCCATCCAAAACACA 59.112 40.000 0.00 0.00 0.00 3.72
2411 2794 6.548622 CCATCTAATCTCCATCCAAAACACAT 59.451 38.462 0.00 0.00 0.00 3.21
2412 2795 7.255381 CCATCTAATCTCCATCCAAAACACATC 60.255 40.741 0.00 0.00 0.00 3.06
2413 2796 6.122277 TCTAATCTCCATCCAAAACACATCC 58.878 40.000 0.00 0.00 0.00 3.51
2414 2797 3.805066 TCTCCATCCAAAACACATCCA 57.195 42.857 0.00 0.00 0.00 3.41
2415 2798 4.111255 TCTCCATCCAAAACACATCCAA 57.889 40.909 0.00 0.00 0.00 3.53
2416 2799 3.826157 TCTCCATCCAAAACACATCCAAC 59.174 43.478 0.00 0.00 0.00 3.77
2417 2800 2.556189 TCCATCCAAAACACATCCAACG 59.444 45.455 0.00 0.00 0.00 4.10
2418 2801 2.352617 CCATCCAAAACACATCCAACGG 60.353 50.000 0.00 0.00 0.00 4.44
2419 2802 2.060050 TCCAAAACACATCCAACGGT 57.940 45.000 0.00 0.00 0.00 4.83
2420 2803 1.950909 TCCAAAACACATCCAACGGTC 59.049 47.619 0.00 0.00 0.00 4.79
2421 2804 1.953686 CCAAAACACATCCAACGGTCT 59.046 47.619 0.00 0.00 0.00 3.85
2422 2805 3.142951 CCAAAACACATCCAACGGTCTA 58.857 45.455 0.00 0.00 0.00 2.59
2423 2806 3.058501 CCAAAACACATCCAACGGTCTAC 60.059 47.826 0.00 0.00 0.00 2.59
2424 2807 3.478857 AAACACATCCAACGGTCTACA 57.521 42.857 0.00 0.00 0.00 2.74
2425 2808 3.695830 AACACATCCAACGGTCTACAT 57.304 42.857 0.00 0.00 0.00 2.29
2426 2809 2.972625 ACACATCCAACGGTCTACATG 58.027 47.619 0.00 0.00 0.00 3.21
2427 2810 2.565391 ACACATCCAACGGTCTACATGA 59.435 45.455 0.00 0.00 0.00 3.07
2428 2811 3.190079 CACATCCAACGGTCTACATGAG 58.810 50.000 0.00 0.00 0.00 2.90
2429 2812 3.096852 ACATCCAACGGTCTACATGAGA 58.903 45.455 0.00 0.00 0.00 3.27
2440 2823 4.350368 TCTACATGAGACACAGGCAAAA 57.650 40.909 0.00 0.00 33.22 2.44
2441 2824 4.713553 TCTACATGAGACACAGGCAAAAA 58.286 39.130 0.00 0.00 33.22 1.94
2442 2825 3.715628 ACATGAGACACAGGCAAAAAC 57.284 42.857 0.00 0.00 33.22 2.43
2443 2826 3.290710 ACATGAGACACAGGCAAAAACT 58.709 40.909 0.00 0.00 33.22 2.66
2444 2827 4.460263 ACATGAGACACAGGCAAAAACTA 58.540 39.130 0.00 0.00 33.22 2.24
2445 2828 4.275936 ACATGAGACACAGGCAAAAACTAC 59.724 41.667 0.00 0.00 33.22 2.73
2446 2829 3.879998 TGAGACACAGGCAAAAACTACA 58.120 40.909 0.00 0.00 0.00 2.74
2447 2830 3.876914 TGAGACACAGGCAAAAACTACAG 59.123 43.478 0.00 0.00 0.00 2.74
2448 2831 3.214328 AGACACAGGCAAAAACTACAGG 58.786 45.455 0.00 0.00 0.00 4.00
2449 2832 3.118038 AGACACAGGCAAAAACTACAGGA 60.118 43.478 0.00 0.00 0.00 3.86
2450 2833 2.949644 ACACAGGCAAAAACTACAGGAC 59.050 45.455 0.00 0.00 0.00 3.85
2451 2834 3.214328 CACAGGCAAAAACTACAGGACT 58.786 45.455 0.00 0.00 0.00 3.85
2452 2835 3.632145 CACAGGCAAAAACTACAGGACTT 59.368 43.478 0.00 0.00 0.00 3.01
2453 2836 4.819630 CACAGGCAAAAACTACAGGACTTA 59.180 41.667 0.00 0.00 0.00 2.24
2454 2837 5.049405 CACAGGCAAAAACTACAGGACTTAG 60.049 44.000 0.00 0.00 0.00 2.18
2455 2838 4.072839 AGGCAAAAACTACAGGACTTAGC 58.927 43.478 0.00 0.00 0.00 3.09
2456 2839 3.818773 GGCAAAAACTACAGGACTTAGCA 59.181 43.478 0.00 0.00 0.00 3.49
2457 2840 4.083271 GGCAAAAACTACAGGACTTAGCAG 60.083 45.833 0.00 0.00 0.00 4.24
2458 2841 4.515567 GCAAAAACTACAGGACTTAGCAGT 59.484 41.667 0.00 0.00 35.17 4.40
2459 2842 5.008712 GCAAAAACTACAGGACTTAGCAGTT 59.991 40.000 0.00 0.00 31.22 3.16
2460 2843 6.459710 GCAAAAACTACAGGACTTAGCAGTTT 60.460 38.462 0.00 0.00 37.71 2.66
2461 2844 7.480810 CAAAAACTACAGGACTTAGCAGTTTT 58.519 34.615 4.82 4.82 44.03 2.43
2462 2845 6.619801 AAACTACAGGACTTAGCAGTTTTG 57.380 37.500 0.00 0.00 33.63 2.44
2474 2857 0.109412 CAGTTTTGCAGCCTAGCAGC 60.109 55.000 0.00 0.00 46.54 5.25
2479 2862 3.672293 GCAGCCTAGCAGCAAACA 58.328 55.556 0.00 0.00 40.73 2.83
2480 2863 1.959085 GCAGCCTAGCAGCAAACAA 59.041 52.632 0.00 0.00 40.73 2.83
2481 2864 0.387750 GCAGCCTAGCAGCAAACAAC 60.388 55.000 0.00 0.00 40.73 3.32
2482 2865 0.953727 CAGCCTAGCAGCAAACAACA 59.046 50.000 0.00 0.00 34.23 3.33
2483 2866 1.068748 CAGCCTAGCAGCAAACAACAG 60.069 52.381 0.00 0.00 34.23 3.16
2484 2867 0.954452 GCCTAGCAGCAAACAACAGT 59.046 50.000 0.00 0.00 0.00 3.55
2485 2868 2.151202 GCCTAGCAGCAAACAACAGTA 58.849 47.619 0.00 0.00 0.00 2.74
2486 2869 2.095718 GCCTAGCAGCAAACAACAGTAC 60.096 50.000 0.00 0.00 0.00 2.73
2487 2870 3.138304 CCTAGCAGCAAACAACAGTACA 58.862 45.455 0.00 0.00 0.00 2.90
2488 2871 3.187227 CCTAGCAGCAAACAACAGTACAG 59.813 47.826 0.00 0.00 0.00 2.74
2489 2872 2.643551 AGCAGCAAACAACAGTACAGT 58.356 42.857 0.00 0.00 0.00 3.55
2490 2873 2.614057 AGCAGCAAACAACAGTACAGTC 59.386 45.455 0.00 0.00 0.00 3.51
2491 2874 2.614057 GCAGCAAACAACAGTACAGTCT 59.386 45.455 0.00 0.00 0.00 3.24
2492 2875 3.807622 GCAGCAAACAACAGTACAGTCTA 59.192 43.478 0.00 0.00 0.00 2.59
2493 2876 4.084328 GCAGCAAACAACAGTACAGTCTAG 60.084 45.833 0.00 0.00 0.00 2.43
2494 2877 4.058817 AGCAAACAACAGTACAGTCTAGC 58.941 43.478 0.00 0.00 0.00 3.42
2495 2878 3.807622 GCAAACAACAGTACAGTCTAGCA 59.192 43.478 0.00 0.00 0.00 3.49
2496 2879 4.084328 GCAAACAACAGTACAGTCTAGCAG 60.084 45.833 0.00 0.00 0.00 4.24
2497 2880 3.305398 ACAACAGTACAGTCTAGCAGC 57.695 47.619 0.00 0.00 0.00 5.25
2498 2881 2.628178 ACAACAGTACAGTCTAGCAGCA 59.372 45.455 0.00 0.00 0.00 4.41
2499 2882 3.069586 ACAACAGTACAGTCTAGCAGCAA 59.930 43.478 0.00 0.00 0.00 3.91
2500 2883 4.058124 CAACAGTACAGTCTAGCAGCAAA 58.942 43.478 0.00 0.00 0.00 3.68
2501 2884 3.654414 ACAGTACAGTCTAGCAGCAAAC 58.346 45.455 0.00 0.00 0.00 2.93
2502 2885 3.069586 ACAGTACAGTCTAGCAGCAAACA 59.930 43.478 0.00 0.00 0.00 2.83
2503 2886 4.058124 CAGTACAGTCTAGCAGCAAACAA 58.942 43.478 0.00 0.00 0.00 2.83
2504 2887 4.058817 AGTACAGTCTAGCAGCAAACAAC 58.941 43.478 0.00 0.00 0.00 3.32
2505 2888 1.867233 ACAGTCTAGCAGCAAACAACG 59.133 47.619 0.00 0.00 0.00 4.10
2506 2889 2.135139 CAGTCTAGCAGCAAACAACGA 58.865 47.619 0.00 0.00 0.00 3.85
2507 2890 2.738846 CAGTCTAGCAGCAAACAACGAT 59.261 45.455 0.00 0.00 0.00 3.73
2508 2891 3.926527 CAGTCTAGCAGCAAACAACGATA 59.073 43.478 0.00 0.00 0.00 2.92
2509 2892 3.927142 AGTCTAGCAGCAAACAACGATAC 59.073 43.478 0.00 0.00 0.00 2.24
2510 2893 3.678072 GTCTAGCAGCAAACAACGATACA 59.322 43.478 0.00 0.00 0.00 2.29
2511 2894 3.926527 TCTAGCAGCAAACAACGATACAG 59.073 43.478 0.00 0.00 0.00 2.74
2512 2895 2.494059 AGCAGCAAACAACGATACAGT 58.506 42.857 0.00 0.00 0.00 3.55
2513 2896 2.224079 AGCAGCAAACAACGATACAGTG 59.776 45.455 0.00 0.00 0.00 3.66
2514 2897 2.032030 GCAGCAAACAACGATACAGTGT 60.032 45.455 0.00 0.00 0.00 3.55
2515 2898 3.544651 CAGCAAACAACGATACAGTGTG 58.455 45.455 5.88 0.00 0.00 3.82
2516 2899 2.032030 AGCAAACAACGATACAGTGTGC 60.032 45.455 5.88 0.00 0.00 4.57
2517 2900 2.032030 GCAAACAACGATACAGTGTGCT 60.032 45.455 5.88 0.00 0.00 4.40
2518 2901 3.548014 GCAAACAACGATACAGTGTGCTT 60.548 43.478 5.88 0.00 0.00 3.91
2519 2902 4.211389 CAAACAACGATACAGTGTGCTTC 58.789 43.478 5.88 0.00 0.00 3.86
2520 2903 2.058798 ACAACGATACAGTGTGCTTCG 58.941 47.619 17.95 17.95 35.99 3.79
2521 2904 2.287970 ACAACGATACAGTGTGCTTCGA 60.288 45.455 23.31 0.00 34.15 3.71
2522 2905 2.923655 CAACGATACAGTGTGCTTCGAT 59.076 45.455 23.31 13.85 34.15 3.59
2523 2906 3.232213 ACGATACAGTGTGCTTCGATT 57.768 42.857 23.31 7.05 34.15 3.34
2524 2907 3.179830 ACGATACAGTGTGCTTCGATTC 58.820 45.455 23.31 3.09 34.15 2.52
2525 2908 3.179048 CGATACAGTGTGCTTCGATTCA 58.821 45.455 15.76 0.00 31.74 2.57
2526 2909 3.241553 CGATACAGTGTGCTTCGATTCAG 59.758 47.826 15.76 0.00 31.74 3.02
2527 2910 2.533266 ACAGTGTGCTTCGATTCAGT 57.467 45.000 0.00 0.00 0.00 3.41
2528 2911 2.838736 ACAGTGTGCTTCGATTCAGTT 58.161 42.857 0.00 0.00 0.00 3.16
2529 2912 3.206150 ACAGTGTGCTTCGATTCAGTTT 58.794 40.909 0.00 0.00 0.00 2.66
2530 2913 3.002656 ACAGTGTGCTTCGATTCAGTTTG 59.997 43.478 0.00 0.00 0.00 2.93
2531 2914 3.248363 CAGTGTGCTTCGATTCAGTTTGA 59.752 43.478 0.00 0.00 0.00 2.69
2532 2915 4.067896 AGTGTGCTTCGATTCAGTTTGAT 58.932 39.130 0.00 0.00 0.00 2.57
2533 2916 4.516698 AGTGTGCTTCGATTCAGTTTGATT 59.483 37.500 0.00 0.00 0.00 2.57
2534 2917 5.009010 AGTGTGCTTCGATTCAGTTTGATTT 59.991 36.000 0.00 0.00 0.00 2.17
2535 2918 5.116074 GTGTGCTTCGATTCAGTTTGATTTG 59.884 40.000 0.00 0.00 0.00 2.32
2536 2919 5.008514 TGTGCTTCGATTCAGTTTGATTTGA 59.991 36.000 0.00 0.00 0.00 2.69
2537 2920 5.914635 GTGCTTCGATTCAGTTTGATTTGAA 59.085 36.000 0.00 4.49 37.68 2.69
2538 2921 5.914635 TGCTTCGATTCAGTTTGATTTGAAC 59.085 36.000 0.00 0.00 36.26 3.18
2539 2922 5.914635 GCTTCGATTCAGTTTGATTTGAACA 59.085 36.000 0.00 0.00 36.26 3.18
2540 2923 6.087291 GCTTCGATTCAGTTTGATTTGAACAG 59.913 38.462 0.00 0.00 36.26 3.16
2541 2924 6.859420 TCGATTCAGTTTGATTTGAACAGA 57.141 33.333 0.00 0.00 36.26 3.41
2542 2925 7.439157 TCGATTCAGTTTGATTTGAACAGAT 57.561 32.000 0.00 0.00 36.26 2.90
2543 2926 7.874940 TCGATTCAGTTTGATTTGAACAGATT 58.125 30.769 0.00 0.00 36.26 2.40
2544 2927 7.804600 TCGATTCAGTTTGATTTGAACAGATTG 59.195 33.333 0.00 0.00 36.26 2.67
2545 2928 7.592533 CGATTCAGTTTGATTTGAACAGATTGT 59.407 33.333 0.00 0.00 36.26 2.71
2546 2929 9.897744 GATTCAGTTTGATTTGAACAGATTGTA 57.102 29.630 0.00 0.00 36.26 2.41
2548 2931 9.515020 TTCAGTTTGATTTGAACAGATTGTAAC 57.485 29.630 0.00 0.00 0.00 2.50
2549 2932 8.134895 TCAGTTTGATTTGAACAGATTGTAACC 58.865 33.333 0.00 0.00 0.00 2.85
2550 2933 7.382218 CAGTTTGATTTGAACAGATTGTAACCC 59.618 37.037 0.00 0.00 0.00 4.11
2551 2934 6.968263 TTGATTTGAACAGATTGTAACCCA 57.032 33.333 0.00 0.00 0.00 4.51
2552 2935 6.968263 TGATTTGAACAGATTGTAACCCAA 57.032 33.333 0.00 0.00 37.49 4.12
2553 2936 7.353414 TGATTTGAACAGATTGTAACCCAAA 57.647 32.000 0.00 0.00 36.44 3.28
2554 2937 7.786030 TGATTTGAACAGATTGTAACCCAAAA 58.214 30.769 0.00 0.00 36.44 2.44
2555 2938 8.260818 TGATTTGAACAGATTGTAACCCAAAAA 58.739 29.630 0.00 0.00 36.44 1.94
2595 2978 8.752005 ACAGTACCATATTATGCAATCAAAGT 57.248 30.769 0.00 0.00 0.00 2.66
2596 2979 9.189156 ACAGTACCATATTATGCAATCAAAGTT 57.811 29.630 0.00 0.00 0.00 2.66
2597 2980 9.454585 CAGTACCATATTATGCAATCAAAGTTG 57.545 33.333 0.00 0.00 0.00 3.16
2598 2981 9.407380 AGTACCATATTATGCAATCAAAGTTGA 57.593 29.630 0.00 0.00 42.14 3.18
2600 2983 8.931385 ACCATATTATGCAATCAAAGTTGAAC 57.069 30.769 0.00 0.00 41.13 3.18
2601 2984 8.530311 ACCATATTATGCAATCAAAGTTGAACA 58.470 29.630 0.00 0.00 41.13 3.18
2602 2985 9.368674 CCATATTATGCAATCAAAGTTGAACAA 57.631 29.630 0.00 0.00 41.13 2.83
2606 2989 8.883954 TTATGCAATCAAAGTTGAACAATTCA 57.116 26.923 0.00 0.00 41.13 2.57
2607 2990 7.789273 ATGCAATCAAAGTTGAACAATTCAA 57.211 28.000 0.00 0.00 46.68 2.69
2620 3003 7.712264 TGAACAATTCAATTCCATTTGACAC 57.288 32.000 0.00 0.00 36.59 3.67
2621 3004 6.705381 TGAACAATTCAATTCCATTTGACACC 59.295 34.615 0.00 0.00 36.59 4.16
2622 3005 5.229423 ACAATTCAATTCCATTTGACACCG 58.771 37.500 0.00 0.00 35.42 4.94
2623 3006 5.010516 ACAATTCAATTCCATTTGACACCGA 59.989 36.000 0.00 0.00 35.42 4.69
2624 3007 5.720371 ATTCAATTCCATTTGACACCGAA 57.280 34.783 0.00 0.00 35.42 4.30
2625 3008 5.720371 TTCAATTCCATTTGACACCGAAT 57.280 34.783 0.00 0.00 35.42 3.34
2626 3009 5.309323 TCAATTCCATTTGACACCGAATC 57.691 39.130 0.00 0.00 30.82 2.52
2627 3010 4.157656 TCAATTCCATTTGACACCGAATCC 59.842 41.667 0.00 0.00 30.82 3.01
2628 3011 2.869101 TCCATTTGACACCGAATCCA 57.131 45.000 0.00 0.00 0.00 3.41
2629 3012 2.710377 TCCATTTGACACCGAATCCAG 58.290 47.619 0.00 0.00 0.00 3.86
2630 3013 2.039746 TCCATTTGACACCGAATCCAGT 59.960 45.455 0.00 0.00 0.00 4.00
2631 3014 3.262151 TCCATTTGACACCGAATCCAGTA 59.738 43.478 0.00 0.00 0.00 2.74
2632 3015 3.623060 CCATTTGACACCGAATCCAGTAG 59.377 47.826 0.00 0.00 0.00 2.57
2633 3016 2.380084 TTGACACCGAATCCAGTAGC 57.620 50.000 0.00 0.00 0.00 3.58
2634 3017 1.262417 TGACACCGAATCCAGTAGCA 58.738 50.000 0.00 0.00 0.00 3.49
2635 3018 1.831106 TGACACCGAATCCAGTAGCAT 59.169 47.619 0.00 0.00 0.00 3.79
2636 3019 2.236146 TGACACCGAATCCAGTAGCATT 59.764 45.455 0.00 0.00 0.00 3.56
2637 3020 3.270877 GACACCGAATCCAGTAGCATTT 58.729 45.455 0.00 0.00 0.00 2.32
2638 3021 3.009723 ACACCGAATCCAGTAGCATTTG 58.990 45.455 0.00 0.00 0.00 2.32
2639 3022 3.270027 CACCGAATCCAGTAGCATTTGA 58.730 45.455 0.00 0.00 0.00 2.69
2640 3023 3.063997 CACCGAATCCAGTAGCATTTGAC 59.936 47.826 0.00 0.00 0.00 3.18
2641 3024 3.270027 CCGAATCCAGTAGCATTTGACA 58.730 45.455 0.00 0.00 0.00 3.58
2642 3025 3.879295 CCGAATCCAGTAGCATTTGACAT 59.121 43.478 0.00 0.00 0.00 3.06
2643 3026 4.336433 CCGAATCCAGTAGCATTTGACATT 59.664 41.667 0.00 0.00 0.00 2.71
2644 3027 5.527214 CCGAATCCAGTAGCATTTGACATTA 59.473 40.000 0.00 0.00 0.00 1.90
2645 3028 6.038161 CCGAATCCAGTAGCATTTGACATTAA 59.962 38.462 0.00 0.00 0.00 1.40
2646 3029 7.415095 CCGAATCCAGTAGCATTTGACATTAAA 60.415 37.037 0.00 0.00 0.00 1.52
2647 3030 7.967854 CGAATCCAGTAGCATTTGACATTAAAA 59.032 33.333 0.00 0.00 0.00 1.52
2648 3031 9.294030 GAATCCAGTAGCATTTGACATTAAAAG 57.706 33.333 0.00 0.00 0.00 2.27
2649 3032 7.156876 TCCAGTAGCATTTGACATTAAAAGG 57.843 36.000 0.00 0.00 0.00 3.11
2650 3033 5.807011 CCAGTAGCATTTGACATTAAAAGGC 59.193 40.000 0.00 0.00 42.88 4.35
2655 3038 6.875926 GCATTTGACATTAAAAGGCTGTAG 57.124 37.500 0.00 0.00 40.25 2.74
2656 3039 5.289434 GCATTTGACATTAAAAGGCTGTAGC 59.711 40.000 0.00 0.00 40.25 3.58
2657 3040 6.389091 CATTTGACATTAAAAGGCTGTAGCA 58.611 36.000 6.18 0.00 44.36 3.49
2658 3041 5.371115 TTGACATTAAAAGGCTGTAGCAC 57.629 39.130 6.18 0.00 44.36 4.40
2659 3042 4.393834 TGACATTAAAAGGCTGTAGCACA 58.606 39.130 6.18 0.00 44.36 4.57
2660 3043 5.009631 TGACATTAAAAGGCTGTAGCACAT 58.990 37.500 6.18 0.00 44.36 3.21
2661 3044 6.176896 TGACATTAAAAGGCTGTAGCACATA 58.823 36.000 6.18 0.00 44.36 2.29
2662 3045 6.657117 TGACATTAAAAGGCTGTAGCACATAA 59.343 34.615 6.18 0.65 44.36 1.90
2663 3046 6.852664 ACATTAAAAGGCTGTAGCACATAAC 58.147 36.000 6.18 0.00 44.36 1.89
2664 3047 6.432783 ACATTAAAAGGCTGTAGCACATAACA 59.567 34.615 6.18 0.00 44.36 2.41
2665 3048 6.885952 TTAAAAGGCTGTAGCACATAACAA 57.114 33.333 6.18 0.00 44.36 2.83
2666 3049 5.982890 AAAAGGCTGTAGCACATAACAAT 57.017 34.783 6.18 0.00 44.36 2.71
2667 3050 5.982890 AAAGGCTGTAGCACATAACAATT 57.017 34.783 6.18 0.00 44.36 2.32
2668 3051 4.970662 AGGCTGTAGCACATAACAATTG 57.029 40.909 3.24 3.24 44.36 2.32
2669 3052 4.588899 AGGCTGTAGCACATAACAATTGA 58.411 39.130 13.59 0.00 44.36 2.57
2670 3053 5.009631 AGGCTGTAGCACATAACAATTGAA 58.990 37.500 13.59 0.00 44.36 2.69
2671 3054 5.653769 AGGCTGTAGCACATAACAATTGAAT 59.346 36.000 13.59 2.25 44.36 2.57
2672 3055 5.745294 GGCTGTAGCACATAACAATTGAATG 59.255 40.000 13.59 16.45 44.36 2.67
2673 3056 5.230726 GCTGTAGCACATAACAATTGAATGC 59.769 40.000 13.59 13.06 41.59 3.56
2674 3057 6.513806 TGTAGCACATAACAATTGAATGCT 57.486 33.333 13.59 18.68 43.87 3.79
2675 3058 7.622893 TGTAGCACATAACAATTGAATGCTA 57.377 32.000 13.59 17.79 41.84 3.49
2677 3060 6.513806 AGCACATAACAATTGAATGCTACA 57.486 33.333 13.59 0.00 40.03 2.74
2678 3061 6.558009 AGCACATAACAATTGAATGCTACAG 58.442 36.000 13.59 5.63 40.03 2.74
2679 3062 5.230726 GCACATAACAATTGAATGCTACAGC 59.769 40.000 13.59 10.62 42.50 4.40
2705 3088 9.976511 CAAGAAATGCCAATATTGAGTAATCAT 57.023 29.630 17.23 7.10 0.00 2.45
2707 3090 8.800332 AGAAATGCCAATATTGAGTAATCATCC 58.200 33.333 17.23 6.21 0.00 3.51
2708 3091 8.481492 AAATGCCAATATTGAGTAATCATCCA 57.519 30.769 17.23 0.00 0.00 3.41
2709 3092 8.660295 AATGCCAATATTGAGTAATCATCCAT 57.340 30.769 17.23 1.63 0.00 3.41
2710 3093 7.457024 TGCCAATATTGAGTAATCATCCATG 57.543 36.000 17.23 0.00 0.00 3.66
2711 3094 7.005902 TGCCAATATTGAGTAATCATCCATGT 58.994 34.615 17.23 0.00 0.00 3.21
2712 3095 8.162746 TGCCAATATTGAGTAATCATCCATGTA 58.837 33.333 17.23 0.00 0.00 2.29
2713 3096 8.454106 GCCAATATTGAGTAATCATCCATGTAC 58.546 37.037 17.23 0.00 0.00 2.90
2714 3097 9.506018 CCAATATTGAGTAATCATCCATGTACA 57.494 33.333 17.23 0.00 0.00 2.90
2718 3101 8.806429 ATTGAGTAATCATCCATGTACACAAA 57.194 30.769 0.00 0.00 0.00 2.83
2719 3102 8.628630 TTGAGTAATCATCCATGTACACAAAA 57.371 30.769 0.00 0.00 0.00 2.44
2720 3103 8.267620 TGAGTAATCATCCATGTACACAAAAG 57.732 34.615 0.00 0.00 0.00 2.27
2721 3104 7.088589 AGTAATCATCCATGTACACAAAAGC 57.911 36.000 0.00 0.00 0.00 3.51
2722 3105 5.981088 AATCATCCATGTACACAAAAGCA 57.019 34.783 0.00 0.00 0.00 3.91
2723 3106 5.571784 ATCATCCATGTACACAAAAGCAG 57.428 39.130 0.00 0.00 0.00 4.24
2724 3107 3.758023 TCATCCATGTACACAAAAGCAGG 59.242 43.478 0.00 0.00 0.00 4.85
2725 3108 1.885887 TCCATGTACACAAAAGCAGGC 59.114 47.619 0.00 0.00 0.00 4.85
2726 3109 1.067635 CCATGTACACAAAAGCAGGCC 60.068 52.381 0.00 0.00 0.00 5.19
2727 3110 1.612950 CATGTACACAAAAGCAGGCCA 59.387 47.619 5.01 0.00 0.00 5.36
2728 3111 1.993956 TGTACACAAAAGCAGGCCAT 58.006 45.000 5.01 0.00 0.00 4.40
2729 3112 2.315176 TGTACACAAAAGCAGGCCATT 58.685 42.857 5.01 0.00 0.00 3.16
2730 3113 2.697751 TGTACACAAAAGCAGGCCATTT 59.302 40.909 5.01 0.00 0.00 2.32
2731 3114 2.531522 ACACAAAAGCAGGCCATTTC 57.468 45.000 5.01 0.00 0.00 2.17
2732 3115 1.761784 ACACAAAAGCAGGCCATTTCA 59.238 42.857 5.01 0.00 0.00 2.69
2733 3116 2.137523 CACAAAAGCAGGCCATTTCAC 58.862 47.619 5.01 0.00 0.00 3.18
2734 3117 2.041701 ACAAAAGCAGGCCATTTCACT 58.958 42.857 5.01 0.00 0.00 3.41
2735 3118 2.435437 ACAAAAGCAGGCCATTTCACTT 59.565 40.909 5.01 0.00 0.00 3.16
2736 3119 2.803956 CAAAAGCAGGCCATTTCACTTG 59.196 45.455 5.01 0.00 0.00 3.16
2737 3120 1.708341 AAGCAGGCCATTTCACTTGT 58.292 45.000 5.01 0.00 0.00 3.16
2738 3121 2.584835 AGCAGGCCATTTCACTTGTA 57.415 45.000 5.01 0.00 0.00 2.41
2739 3122 2.162681 AGCAGGCCATTTCACTTGTAC 58.837 47.619 5.01 0.00 0.00 2.90
2740 3123 1.885887 GCAGGCCATTTCACTTGTACA 59.114 47.619 5.01 0.00 0.00 2.90
2741 3124 2.351738 GCAGGCCATTTCACTTGTACAC 60.352 50.000 5.01 0.00 0.00 2.90
2742 3125 3.149196 CAGGCCATTTCACTTGTACACT 58.851 45.455 5.01 0.00 0.00 3.55
2743 3126 3.569701 CAGGCCATTTCACTTGTACACTT 59.430 43.478 5.01 0.00 0.00 3.16
2744 3127 3.821033 AGGCCATTTCACTTGTACACTTC 59.179 43.478 5.01 0.00 0.00 3.01
2745 3128 3.364964 GGCCATTTCACTTGTACACTTCG 60.365 47.826 0.00 0.00 0.00 3.79
2746 3129 3.364964 GCCATTTCACTTGTACACTTCGG 60.365 47.826 0.00 0.00 0.00 4.30
2747 3130 3.364964 CCATTTCACTTGTACACTTCGGC 60.365 47.826 0.00 0.00 0.00 5.54
2748 3131 1.873698 TTCACTTGTACACTTCGGCC 58.126 50.000 0.00 0.00 0.00 6.13
2749 3132 0.753867 TCACTTGTACACTTCGGCCA 59.246 50.000 2.24 0.00 0.00 5.36
2750 3133 1.139256 TCACTTGTACACTTCGGCCAA 59.861 47.619 2.24 0.00 0.00 4.52
2751 3134 1.944024 CACTTGTACACTTCGGCCAAA 59.056 47.619 2.24 0.00 0.00 3.28
2752 3135 2.356382 CACTTGTACACTTCGGCCAAAA 59.644 45.455 2.24 0.00 0.00 2.44
2753 3136 3.018149 ACTTGTACACTTCGGCCAAAAA 58.982 40.909 2.24 0.00 0.00 1.94
2774 3157 7.669089 AAAAAGACTGATTAACTCCCCAAAA 57.331 32.000 0.00 0.00 0.00 2.44
2775 3158 7.855784 AAAAGACTGATTAACTCCCCAAAAT 57.144 32.000 0.00 0.00 0.00 1.82
2776 3159 8.950007 AAAAGACTGATTAACTCCCCAAAATA 57.050 30.769 0.00 0.00 0.00 1.40
2777 3160 7.939784 AAGACTGATTAACTCCCCAAAATAC 57.060 36.000 0.00 0.00 0.00 1.89
2778 3161 7.027874 AGACTGATTAACTCCCCAAAATACA 57.972 36.000 0.00 0.00 0.00 2.29
2779 3162 7.112779 AGACTGATTAACTCCCCAAAATACAG 58.887 38.462 0.00 0.00 0.00 2.74
2780 3163 6.790319 ACTGATTAACTCCCCAAAATACAGT 58.210 36.000 0.00 0.00 0.00 3.55
2781 3164 7.924541 ACTGATTAACTCCCCAAAATACAGTA 58.075 34.615 0.00 0.00 33.10 2.74
2782 3165 8.047310 ACTGATTAACTCCCCAAAATACAGTAG 58.953 37.037 0.00 0.00 33.10 2.57
2783 3166 7.924541 TGATTAACTCCCCAAAATACAGTAGT 58.075 34.615 0.00 0.00 0.00 2.73
2784 3167 8.387813 TGATTAACTCCCCAAAATACAGTAGTT 58.612 33.333 0.00 0.00 0.00 2.24
2785 3168 9.895138 GATTAACTCCCCAAAATACAGTAGTTA 57.105 33.333 0.00 0.00 0.00 2.24
2787 3170 7.991084 AACTCCCCAAAATACAGTAGTTAAC 57.009 36.000 0.00 0.00 0.00 2.01
2788 3171 6.479006 ACTCCCCAAAATACAGTAGTTAACC 58.521 40.000 0.88 0.00 0.00 2.85
2789 3172 6.273965 ACTCCCCAAAATACAGTAGTTAACCT 59.726 38.462 0.88 0.00 0.00 3.50
2790 3173 6.478129 TCCCCAAAATACAGTAGTTAACCTG 58.522 40.000 0.88 6.17 0.00 4.00
2791 3174 6.044637 TCCCCAAAATACAGTAGTTAACCTGT 59.955 38.462 17.87 17.87 0.00 4.00
2792 3175 6.373495 CCCCAAAATACAGTAGTTAACCTGTC 59.627 42.308 17.46 0.99 0.00 3.51
2793 3176 6.373495 CCCAAAATACAGTAGTTAACCTGTCC 59.627 42.308 17.46 0.00 0.00 4.02
2794 3177 6.938030 CCAAAATACAGTAGTTAACCTGTCCA 59.062 38.462 17.46 5.65 0.00 4.02
2795 3178 7.446013 CCAAAATACAGTAGTTAACCTGTCCAA 59.554 37.037 17.46 5.07 0.00 3.53
2796 3179 8.842280 CAAAATACAGTAGTTAACCTGTCCAAA 58.158 33.333 17.46 4.78 0.00 3.28
2797 3180 8.983702 AAATACAGTAGTTAACCTGTCCAAAA 57.016 30.769 17.46 4.48 0.00 2.44
2798 3181 9.582648 AAATACAGTAGTTAACCTGTCCAAAAT 57.417 29.630 17.46 6.23 0.00 1.82
2800 3183 7.974482 ACAGTAGTTAACCTGTCCAAAATAC 57.026 36.000 10.63 0.37 0.00 1.89
2801 3184 7.742767 ACAGTAGTTAACCTGTCCAAAATACT 58.257 34.615 10.63 2.40 34.20 2.12
2802 3185 8.873144 ACAGTAGTTAACCTGTCCAAAATACTA 58.127 33.333 10.63 0.00 32.70 1.82
2803 3186 9.148104 CAGTAGTTAACCTGTCCAAAATACTAC 57.852 37.037 0.88 0.00 32.70 2.73
2804 3187 8.316946 AGTAGTTAACCTGTCCAAAATACTACC 58.683 37.037 0.88 0.00 37.31 3.18
2805 3188 7.325725 AGTTAACCTGTCCAAAATACTACCT 57.674 36.000 0.88 0.00 0.00 3.08
2806 3189 8.439964 AGTTAACCTGTCCAAAATACTACCTA 57.560 34.615 0.88 0.00 0.00 3.08
2807 3190 8.883302 AGTTAACCTGTCCAAAATACTACCTAA 58.117 33.333 0.88 0.00 0.00 2.69
2808 3191 8.939929 GTTAACCTGTCCAAAATACTACCTAAC 58.060 37.037 0.00 0.00 0.00 2.34
2809 3192 6.691255 ACCTGTCCAAAATACTACCTAACA 57.309 37.500 0.00 0.00 0.00 2.41
2810 3193 7.081857 ACCTGTCCAAAATACTACCTAACAA 57.918 36.000 0.00 0.00 0.00 2.83
2811 3194 6.938596 ACCTGTCCAAAATACTACCTAACAAC 59.061 38.462 0.00 0.00 0.00 3.32
2812 3195 7.166167 CCTGTCCAAAATACTACCTAACAACT 58.834 38.462 0.00 0.00 0.00 3.16
2813 3196 7.664318 CCTGTCCAAAATACTACCTAACAACTT 59.336 37.037 0.00 0.00 0.00 2.66
2814 3197 8.983702 TGTCCAAAATACTACCTAACAACTTT 57.016 30.769 0.00 0.00 0.00 2.66
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 2.976356 GTGGGTACTGGGTCGTCC 59.024 66.667 0.00 0.00 0.00 4.79
14 15 2.570181 CGTGGGTACTGGGTCGTC 59.430 66.667 0.00 0.00 0.00 4.20
15 16 3.688159 GCGTGGGTACTGGGTCGT 61.688 66.667 0.00 0.00 0.00 4.34
16 17 4.789075 CGCGTGGGTACTGGGTCG 62.789 72.222 0.00 0.00 0.00 4.79
17 18 3.352338 CTCGCGTGGGTACTGGGTC 62.352 68.421 5.77 0.00 0.00 4.46
18 19 3.379445 CTCGCGTGGGTACTGGGT 61.379 66.667 5.77 0.00 0.00 4.51
19 20 4.143333 CCTCGCGTGGGTACTGGG 62.143 72.222 19.32 0.00 0.00 4.45
20 21 4.143333 CCCTCGCGTGGGTACTGG 62.143 72.222 33.06 10.87 42.25 4.00
27 28 4.452733 GTTCCCTCCCTCGCGTGG 62.453 72.222 20.08 20.08 0.00 4.94
28 29 4.452733 GGTTCCCTCCCTCGCGTG 62.453 72.222 5.77 2.75 0.00 5.34
29 30 4.698625 AGGTTCCCTCCCTCGCGT 62.699 66.667 5.77 0.00 0.00 6.01
30 31 3.372554 GAAGGTTCCCTCCCTCGCG 62.373 68.421 0.00 0.00 30.89 5.87
31 32 2.245438 CTGAAGGTTCCCTCCCTCGC 62.245 65.000 0.00 0.00 30.89 5.03
32 33 1.617947 CCTGAAGGTTCCCTCCCTCG 61.618 65.000 0.00 0.00 30.89 4.63
33 34 1.916206 GCCTGAAGGTTCCCTCCCTC 61.916 65.000 0.00 0.00 37.57 4.30
34 35 1.925972 GCCTGAAGGTTCCCTCCCT 60.926 63.158 0.00 0.00 37.57 4.20
35 36 2.677848 GCCTGAAGGTTCCCTCCC 59.322 66.667 0.00 0.00 37.57 4.30
36 37 2.245438 CTCGCCTGAAGGTTCCCTCC 62.245 65.000 0.00 0.00 37.57 4.30
37 38 1.219393 CTCGCCTGAAGGTTCCCTC 59.781 63.158 0.00 0.00 37.57 4.30
38 39 2.294078 CCTCGCCTGAAGGTTCCCT 61.294 63.158 0.00 0.00 37.57 4.20
39 40 2.269241 CCTCGCCTGAAGGTTCCC 59.731 66.667 0.00 0.00 37.57 3.97
40 41 2.269241 CCCTCGCCTGAAGGTTCC 59.731 66.667 0.00 0.00 37.57 3.62
41 42 2.245438 CTCCCCTCGCCTGAAGGTTC 62.245 65.000 0.00 0.00 37.57 3.62
42 43 2.203938 TCCCCTCGCCTGAAGGTT 60.204 61.111 0.00 0.00 37.57 3.50
43 44 2.685380 CTCCCCTCGCCTGAAGGT 60.685 66.667 0.00 0.00 37.57 3.50
44 45 4.168291 GCTCCCCTCGCCTGAAGG 62.168 72.222 0.00 0.00 38.53 3.46
45 46 2.739996 ATGCTCCCCTCGCCTGAAG 61.740 63.158 0.00 0.00 0.00 3.02
46 47 2.688666 ATGCTCCCCTCGCCTGAA 60.689 61.111 0.00 0.00 0.00 3.02
47 48 3.473647 CATGCTCCCCTCGCCTGA 61.474 66.667 0.00 0.00 0.00 3.86
50 51 4.575973 ATGCATGCTCCCCTCGCC 62.576 66.667 20.33 0.00 0.00 5.54
51 52 2.955022 AAGATGCATGCTCCCCTCGC 62.955 60.000 20.33 0.00 0.00 5.03
86 87 5.008019 CGAACTGGAATTATCATGGGAGTTG 59.992 44.000 0.00 0.00 0.00 3.16
88 89 4.164221 ACGAACTGGAATTATCATGGGAGT 59.836 41.667 0.00 0.00 0.00 3.85
109 110 5.333364 CGCTCGCATACATTTTTATACAACG 59.667 40.000 0.00 0.00 0.00 4.10
155 156 8.776376 AAAAAGTGACTGATGTGAAATGTTTT 57.224 26.923 0.00 0.00 0.00 2.43
168 169 7.453393 AGATGGTCTTGATAAAAAGTGACTGA 58.547 34.615 0.00 0.00 0.00 3.41
210 211 2.094182 ACGGTGCGTGATCTAATTCTGT 60.094 45.455 0.00 0.00 39.18 3.41
211 212 2.540515 ACGGTGCGTGATCTAATTCTG 58.459 47.619 0.00 0.00 39.18 3.02
222 223 0.382636 GAAAAGACGAACGGTGCGTG 60.383 55.000 20.66 0.00 42.77 5.34
223 224 1.493134 GGAAAAGACGAACGGTGCGT 61.493 55.000 15.22 15.22 45.79 5.24
225 226 0.883370 AGGGAAAAGACGAACGGTGC 60.883 55.000 0.00 0.00 0.00 5.01
233 234 2.861147 AGAAAGGGAGGGAAAAGACG 57.139 50.000 0.00 0.00 0.00 4.18
247 248 2.012673 CCGCATGGAGGAAGAAGAAAG 58.987 52.381 0.00 0.00 37.49 2.62
295 296 3.353836 CGTCCGTGGTGCCAAAGG 61.354 66.667 7.43 7.43 0.00 3.11
344 345 1.196104 TACGTTGGGGGAGGTTGAGG 61.196 60.000 0.00 0.00 0.00 3.86
380 381 1.007963 AGGGTTTAGAGGGATGGTCGA 59.992 52.381 0.00 0.00 0.00 4.20
389 390 1.067071 GGTGTCGTGAGGGTTTAGAGG 60.067 57.143 0.00 0.00 0.00 3.69
428 429 5.123936 CGAGGAAGAAACTTAATTAGGGGG 58.876 45.833 0.00 0.00 0.00 5.40
429 430 4.575236 GCGAGGAAGAAACTTAATTAGGGG 59.425 45.833 0.00 0.00 0.00 4.79
430 431 4.575236 GGCGAGGAAGAAACTTAATTAGGG 59.425 45.833 0.00 0.00 0.00 3.53
431 432 5.429130 AGGCGAGGAAGAAACTTAATTAGG 58.571 41.667 0.00 0.00 0.00 2.69
432 433 5.524281 GGAGGCGAGGAAGAAACTTAATTAG 59.476 44.000 0.00 0.00 0.00 1.73
433 434 5.046159 TGGAGGCGAGGAAGAAACTTAATTA 60.046 40.000 0.00 0.00 0.00 1.40
434 435 4.262617 GGAGGCGAGGAAGAAACTTAATT 58.737 43.478 0.00 0.00 0.00 1.40
435 436 3.263425 TGGAGGCGAGGAAGAAACTTAAT 59.737 43.478 0.00 0.00 0.00 1.40
436 437 2.635915 TGGAGGCGAGGAAGAAACTTAA 59.364 45.455 0.00 0.00 0.00 1.85
437 438 2.028385 GTGGAGGCGAGGAAGAAACTTA 60.028 50.000 0.00 0.00 0.00 2.24
438 439 1.056660 TGGAGGCGAGGAAGAAACTT 58.943 50.000 0.00 0.00 0.00 2.66
439 440 0.321996 GTGGAGGCGAGGAAGAAACT 59.678 55.000 0.00 0.00 0.00 2.66
440 441 0.673956 GGTGGAGGCGAGGAAGAAAC 60.674 60.000 0.00 0.00 0.00 2.78
441 442 0.836400 AGGTGGAGGCGAGGAAGAAA 60.836 55.000 0.00 0.00 0.00 2.52
442 443 1.229209 AGGTGGAGGCGAGGAAGAA 60.229 57.895 0.00 0.00 0.00 2.52
443 444 1.984570 CAGGTGGAGGCGAGGAAGA 60.985 63.158 0.00 0.00 0.00 2.87
444 445 2.581354 CAGGTGGAGGCGAGGAAG 59.419 66.667 0.00 0.00 0.00 3.46
445 446 3.003173 CCAGGTGGAGGCGAGGAA 61.003 66.667 0.00 0.00 37.39 3.36
454 455 1.000019 CTACGGTCTCCCAGGTGGA 60.000 63.158 0.00 0.00 42.41 4.02
455 456 2.722201 GCTACGGTCTCCCAGGTGG 61.722 68.421 0.00 0.00 0.00 4.61
456 457 1.668101 GAGCTACGGTCTCCCAGGTG 61.668 65.000 0.00 0.00 0.00 4.00
457 458 1.380112 GAGCTACGGTCTCCCAGGT 60.380 63.158 0.00 0.00 0.00 4.00
458 459 2.482333 CGAGCTACGGTCTCCCAGG 61.482 68.421 0.00 0.00 38.46 4.45
489 788 4.052229 CCGAAGCGTGGACGACCT 62.052 66.667 5.33 0.00 43.02 3.85
501 800 4.821589 GCCAGGACCTCGCCGAAG 62.822 72.222 0.00 0.00 0.00 3.79
537 837 0.180406 GGGGACTGTGTGACAAGTGT 59.820 55.000 5.40 0.00 0.00 3.55
542 842 3.936203 GGCGGGGACTGTGTGACA 61.936 66.667 0.00 0.00 36.83 3.58
568 868 3.243501 TGAATCACTTTCTGCTTTGCACC 60.244 43.478 0.00 0.00 35.23 5.01
577 877 5.639757 TGTTGTTGTGTGAATCACTTTCTG 58.360 37.500 14.97 0.00 46.27 3.02
587 887 4.629200 GCCTGAATTTTGTTGTTGTGTGAA 59.371 37.500 0.00 0.00 0.00 3.18
590 890 4.199432 TGCCTGAATTTTGTTGTTGTGT 57.801 36.364 0.00 0.00 0.00 3.72
591 891 6.645827 TCATATGCCTGAATTTTGTTGTTGTG 59.354 34.615 0.00 0.00 0.00 3.33
593 893 7.092079 TCTCATATGCCTGAATTTTGTTGTTG 58.908 34.615 0.00 0.00 0.00 3.33
599 899 8.953313 TGCTATATCTCATATGCCTGAATTTTG 58.047 33.333 0.00 0.00 0.00 2.44
604 906 9.170734 GATTTTGCTATATCTCATATGCCTGAA 57.829 33.333 0.00 0.00 0.00 3.02
642 944 9.520515 AACTTCCTCTGTTTTATGAATATGTGT 57.479 29.630 0.00 0.00 0.00 3.72
643 945 9.994432 GAACTTCCTCTGTTTTATGAATATGTG 57.006 33.333 0.00 0.00 0.00 3.21
644 946 9.739276 TGAACTTCCTCTGTTTTATGAATATGT 57.261 29.630 0.00 0.00 0.00 2.29
648 950 8.897752 GCTATGAACTTCCTCTGTTTTATGAAT 58.102 33.333 0.00 0.00 0.00 2.57
660 962 2.622436 ACTTGCGCTATGAACTTCCTC 58.378 47.619 9.73 0.00 0.00 3.71
673 975 3.119424 AGTCTCTTTAGGAGTACTTGCGC 60.119 47.826 0.00 0.00 42.40 6.09
694 996 6.674066 TGGGAGTACTTTTTAAATTTGCGAG 58.326 36.000 0.00 0.00 0.00 5.03
705 1007 3.889538 GTGCCTCTTTGGGAGTACTTTTT 59.110 43.478 0.00 0.00 40.30 1.94
707 1009 2.224793 GGTGCCTCTTTGGGAGTACTTT 60.225 50.000 0.00 0.00 40.30 2.66
714 1016 3.646715 CCCGGTGCCTCTTTGGGA 61.647 66.667 0.00 0.00 42.77 4.37
772 1074 6.391227 TTTTTCAGGTTCTTCTCCATTCAC 57.609 37.500 0.00 0.00 0.00 3.18
890 1193 1.893137 GGGGTTTTTGAGATGGTGTCC 59.107 52.381 0.00 0.00 0.00 4.02
1134 1468 1.301677 GCTGCTTCTTCTTGGACGGG 61.302 60.000 0.00 0.00 0.00 5.28
1878 2244 3.508793 CCAGACAACAAAATCAGCCTCAT 59.491 43.478 0.00 0.00 0.00 2.90
2013 2389 2.995258 GCATCAATTCCGCAAACACAAT 59.005 40.909 0.00 0.00 0.00 2.71
2023 2399 3.183172 CAGTCGTAGATGCATCAATTCCG 59.817 47.826 27.81 19.59 40.67 4.30
2037 2413 5.637810 TCCAAATTTGCTAGTTCAGTCGTAG 59.362 40.000 12.92 0.00 0.00 3.51
2043 2419 6.980397 AGTTGTTTCCAAATTTGCTAGTTCAG 59.020 34.615 12.92 0.00 30.94 3.02
2097 2473 1.002468 TGCAAACAGCTTTCGAGCTTC 60.002 47.619 0.00 0.00 43.52 3.86
2175 2558 6.256912 AGCACTACTCTTACTCTGTTGTAC 57.743 41.667 0.00 0.00 0.00 2.90
2190 2573 1.307097 GATCGGACGGTAGCACTACT 58.693 55.000 7.69 0.00 36.36 2.57
2327 2710 5.558818 AGCATGAAGTTGAAAGATCTCAGT 58.441 37.500 0.00 0.00 0.00 3.41
2328 2711 6.372103 AGAAGCATGAAGTTGAAAGATCTCAG 59.628 38.462 0.00 0.00 0.00 3.35
2329 2712 6.148976 CAGAAGCATGAAGTTGAAAGATCTCA 59.851 38.462 0.00 0.00 0.00 3.27
2330 2713 6.544622 CAGAAGCATGAAGTTGAAAGATCTC 58.455 40.000 0.00 0.00 0.00 2.75
2331 2714 5.106237 GCAGAAGCATGAAGTTGAAAGATCT 60.106 40.000 0.00 0.00 41.58 2.75
2332 2715 5.094134 GCAGAAGCATGAAGTTGAAAGATC 58.906 41.667 0.00 0.00 41.58 2.75
2333 2716 5.056894 GCAGAAGCATGAAGTTGAAAGAT 57.943 39.130 0.00 0.00 41.58 2.40
2334 2717 4.494350 GCAGAAGCATGAAGTTGAAAGA 57.506 40.909 0.00 0.00 41.58 2.52
2347 2730 0.107263 TCACCAAGTGTGCAGAAGCA 60.107 50.000 0.00 0.00 45.03 3.91
2348 2731 1.002033 CTTCACCAAGTGTGCAGAAGC 60.002 52.381 0.00 0.00 45.03 3.86
2349 2732 2.289002 GACTTCACCAAGTGTGCAGAAG 59.711 50.000 6.54 6.54 43.37 2.85
2350 2733 2.288666 GACTTCACCAAGTGTGCAGAA 58.711 47.619 0.00 0.00 43.37 3.02
2351 2734 1.209261 TGACTTCACCAAGTGTGCAGA 59.791 47.619 0.00 0.00 43.37 4.26
2352 2735 1.331756 GTGACTTCACCAAGTGTGCAG 59.668 52.381 0.00 0.00 43.37 4.41
2353 2736 1.378531 GTGACTTCACCAAGTGTGCA 58.621 50.000 0.00 0.00 43.37 4.57
2354 2737 0.304705 CGTGACTTCACCAAGTGTGC 59.695 55.000 3.77 0.00 43.37 4.57
2355 2738 0.304705 GCGTGACTTCACCAAGTGTG 59.695 55.000 3.77 0.00 43.37 3.82
2356 2739 0.178068 AGCGTGACTTCACCAAGTGT 59.822 50.000 3.77 0.00 43.37 3.55
2357 2740 0.583438 CAGCGTGACTTCACCAAGTG 59.417 55.000 3.77 0.00 43.37 3.16
2358 2741 1.160329 GCAGCGTGACTTCACCAAGT 61.160 55.000 3.77 0.00 46.21 3.16
2359 2742 1.159713 TGCAGCGTGACTTCACCAAG 61.160 55.000 3.77 0.00 43.66 3.61
2360 2743 0.746204 TTGCAGCGTGACTTCACCAA 60.746 50.000 3.77 0.06 43.66 3.67
2361 2744 1.153269 TTGCAGCGTGACTTCACCA 60.153 52.632 3.77 0.00 43.66 4.17
2362 2745 1.160329 AGTTGCAGCGTGACTTCACC 61.160 55.000 3.77 0.00 43.66 4.02
2363 2746 0.657840 AAGTTGCAGCGTGACTTCAC 59.342 50.000 0.00 0.00 43.15 3.18
2364 2747 1.378531 AAAGTTGCAGCGTGACTTCA 58.621 45.000 8.55 0.00 32.79 3.02
2365 2748 2.663063 GCTAAAGTTGCAGCGTGACTTC 60.663 50.000 8.55 0.00 32.79 3.01
2366 2749 1.264288 GCTAAAGTTGCAGCGTGACTT 59.736 47.619 0.00 0.00 35.27 3.01
2367 2750 0.868406 GCTAAAGTTGCAGCGTGACT 59.132 50.000 0.00 0.00 0.00 3.41
2368 2751 0.110192 GGCTAAAGTTGCAGCGTGAC 60.110 55.000 0.00 0.00 38.73 3.67
2369 2752 0.533978 TGGCTAAAGTTGCAGCGTGA 60.534 50.000 0.00 0.00 38.73 4.35
2370 2753 0.523072 ATGGCTAAAGTTGCAGCGTG 59.477 50.000 0.00 0.00 38.73 5.34
2371 2754 0.804989 GATGGCTAAAGTTGCAGCGT 59.195 50.000 0.00 0.00 38.73 5.07
2372 2755 1.089920 AGATGGCTAAAGTTGCAGCG 58.910 50.000 0.00 0.00 38.73 5.18
2373 2756 4.578105 AGATTAGATGGCTAAAGTTGCAGC 59.422 41.667 0.00 0.00 39.85 5.25
2374 2757 5.238214 GGAGATTAGATGGCTAAAGTTGCAG 59.762 44.000 0.00 0.00 39.85 4.41
2375 2758 5.126067 GGAGATTAGATGGCTAAAGTTGCA 58.874 41.667 0.00 0.00 39.85 4.08
2376 2759 5.126067 TGGAGATTAGATGGCTAAAGTTGC 58.874 41.667 0.00 0.00 39.85 4.17
2377 2760 6.429385 GGATGGAGATTAGATGGCTAAAGTTG 59.571 42.308 0.00 0.00 39.85 3.16
2378 2761 6.101734 TGGATGGAGATTAGATGGCTAAAGTT 59.898 38.462 0.00 0.00 39.85 2.66
2379 2762 5.608437 TGGATGGAGATTAGATGGCTAAAGT 59.392 40.000 0.00 0.00 39.85 2.66
2380 2763 6.119240 TGGATGGAGATTAGATGGCTAAAG 57.881 41.667 0.00 0.00 39.85 1.85
2381 2764 6.514012 TTGGATGGAGATTAGATGGCTAAA 57.486 37.500 0.00 0.00 39.85 1.85
2382 2765 6.514012 TTTGGATGGAGATTAGATGGCTAA 57.486 37.500 0.00 0.00 40.65 3.09
2383 2766 6.126507 TGTTTTGGATGGAGATTAGATGGCTA 60.127 38.462 0.00 0.00 0.00 3.93
2384 2767 5.136105 GTTTTGGATGGAGATTAGATGGCT 58.864 41.667 0.00 0.00 0.00 4.75
2385 2768 4.889409 TGTTTTGGATGGAGATTAGATGGC 59.111 41.667 0.00 0.00 0.00 4.40
2386 2769 5.887598 TGTGTTTTGGATGGAGATTAGATGG 59.112 40.000 0.00 0.00 0.00 3.51
2387 2770 7.255381 GGATGTGTTTTGGATGGAGATTAGATG 60.255 40.741 0.00 0.00 0.00 2.90
2388 2771 6.774656 GGATGTGTTTTGGATGGAGATTAGAT 59.225 38.462 0.00 0.00 0.00 1.98
2389 2772 6.122277 GGATGTGTTTTGGATGGAGATTAGA 58.878 40.000 0.00 0.00 0.00 2.10
2390 2773 5.887598 TGGATGTGTTTTGGATGGAGATTAG 59.112 40.000 0.00 0.00 0.00 1.73
2391 2774 5.825532 TGGATGTGTTTTGGATGGAGATTA 58.174 37.500 0.00 0.00 0.00 1.75
2392 2775 4.676109 TGGATGTGTTTTGGATGGAGATT 58.324 39.130 0.00 0.00 0.00 2.40
2393 2776 4.320546 TGGATGTGTTTTGGATGGAGAT 57.679 40.909 0.00 0.00 0.00 2.75
2394 2777 3.805066 TGGATGTGTTTTGGATGGAGA 57.195 42.857 0.00 0.00 0.00 3.71
2395 2778 3.366273 CGTTGGATGTGTTTTGGATGGAG 60.366 47.826 0.00 0.00 0.00 3.86
2396 2779 2.556189 CGTTGGATGTGTTTTGGATGGA 59.444 45.455 0.00 0.00 0.00 3.41
2397 2780 2.352617 CCGTTGGATGTGTTTTGGATGG 60.353 50.000 0.00 0.00 0.00 3.51
2398 2781 2.295909 ACCGTTGGATGTGTTTTGGATG 59.704 45.455 0.00 0.00 0.00 3.51
2399 2782 2.556622 GACCGTTGGATGTGTTTTGGAT 59.443 45.455 0.00 0.00 0.00 3.41
2400 2783 1.950909 GACCGTTGGATGTGTTTTGGA 59.049 47.619 0.00 0.00 0.00 3.53
2401 2784 1.953686 AGACCGTTGGATGTGTTTTGG 59.046 47.619 0.00 0.00 0.00 3.28
2402 2785 3.562141 TGTAGACCGTTGGATGTGTTTTG 59.438 43.478 0.00 0.00 0.00 2.44
2403 2786 3.811083 TGTAGACCGTTGGATGTGTTTT 58.189 40.909 0.00 0.00 0.00 2.43
2404 2787 3.478857 TGTAGACCGTTGGATGTGTTT 57.521 42.857 0.00 0.00 0.00 2.83
2405 2788 3.007506 TCATGTAGACCGTTGGATGTGTT 59.992 43.478 0.00 0.00 0.00 3.32
2406 2789 2.565391 TCATGTAGACCGTTGGATGTGT 59.435 45.455 0.00 0.00 0.00 3.72
2407 2790 3.119137 TCTCATGTAGACCGTTGGATGTG 60.119 47.826 0.00 0.00 0.00 3.21
2408 2791 3.096852 TCTCATGTAGACCGTTGGATGT 58.903 45.455 0.00 0.00 0.00 3.06
2409 2792 3.801114 TCTCATGTAGACCGTTGGATG 57.199 47.619 0.00 0.00 0.00 3.51
2419 2802 4.350368 TTTTGCCTGTGTCTCATGTAGA 57.650 40.909 0.00 0.00 0.00 2.59
2420 2803 4.516698 AGTTTTTGCCTGTGTCTCATGTAG 59.483 41.667 0.00 0.00 0.00 2.74
2421 2804 4.460263 AGTTTTTGCCTGTGTCTCATGTA 58.540 39.130 0.00 0.00 0.00 2.29
2422 2805 3.290710 AGTTTTTGCCTGTGTCTCATGT 58.709 40.909 0.00 0.00 0.00 3.21
2423 2806 3.996150 AGTTTTTGCCTGTGTCTCATG 57.004 42.857 0.00 0.00 0.00 3.07
2424 2807 4.460263 TGTAGTTTTTGCCTGTGTCTCAT 58.540 39.130 0.00 0.00 0.00 2.90
2425 2808 3.876914 CTGTAGTTTTTGCCTGTGTCTCA 59.123 43.478 0.00 0.00 0.00 3.27
2426 2809 3.251004 CCTGTAGTTTTTGCCTGTGTCTC 59.749 47.826 0.00 0.00 0.00 3.36
2427 2810 3.118038 TCCTGTAGTTTTTGCCTGTGTCT 60.118 43.478 0.00 0.00 0.00 3.41
2428 2811 3.003378 GTCCTGTAGTTTTTGCCTGTGTC 59.997 47.826 0.00 0.00 0.00 3.67
2429 2812 2.949644 GTCCTGTAGTTTTTGCCTGTGT 59.050 45.455 0.00 0.00 0.00 3.72
2430 2813 3.214328 AGTCCTGTAGTTTTTGCCTGTG 58.786 45.455 0.00 0.00 0.00 3.66
2431 2814 3.577805 AGTCCTGTAGTTTTTGCCTGT 57.422 42.857 0.00 0.00 0.00 4.00
2432 2815 4.083271 GCTAAGTCCTGTAGTTTTTGCCTG 60.083 45.833 0.00 0.00 0.00 4.85
2433 2816 4.072839 GCTAAGTCCTGTAGTTTTTGCCT 58.927 43.478 0.00 0.00 0.00 4.75
2434 2817 3.818773 TGCTAAGTCCTGTAGTTTTTGCC 59.181 43.478 0.00 0.00 0.00 4.52
2435 2818 4.515567 ACTGCTAAGTCCTGTAGTTTTTGC 59.484 41.667 0.00 0.00 26.77 3.68
2436 2819 6.619801 AACTGCTAAGTCCTGTAGTTTTTG 57.380 37.500 0.00 0.00 36.08 2.44
2439 2822 5.008712 GCAAAACTGCTAAGTCCTGTAGTTT 59.991 40.000 0.00 0.00 45.84 2.66
2440 2823 4.515567 GCAAAACTGCTAAGTCCTGTAGTT 59.484 41.667 0.00 0.00 39.97 2.24
2441 2824 4.065789 GCAAAACTGCTAAGTCCTGTAGT 58.934 43.478 0.00 0.00 34.77 2.73
2442 2825 4.065088 TGCAAAACTGCTAAGTCCTGTAG 58.935 43.478 0.00 0.00 34.77 2.74
2443 2826 4.065088 CTGCAAAACTGCTAAGTCCTGTA 58.935 43.478 0.00 0.00 34.77 2.74
2444 2827 2.880890 CTGCAAAACTGCTAAGTCCTGT 59.119 45.455 0.00 0.00 34.77 4.00
2445 2828 2.351157 GCTGCAAAACTGCTAAGTCCTG 60.351 50.000 0.00 0.00 39.94 3.86
2446 2829 1.882623 GCTGCAAAACTGCTAAGTCCT 59.117 47.619 0.00 0.00 39.94 3.85
2447 2830 1.068264 GGCTGCAAAACTGCTAAGTCC 60.068 52.381 0.50 0.00 42.51 3.85
2448 2831 1.882623 AGGCTGCAAAACTGCTAAGTC 59.117 47.619 0.50 0.00 42.51 3.01
2449 2832 1.986882 AGGCTGCAAAACTGCTAAGT 58.013 45.000 0.50 0.00 42.51 2.24
2450 2833 2.159462 GCTAGGCTGCAAAACTGCTAAG 60.159 50.000 0.50 0.00 42.51 2.18
2451 2834 1.812571 GCTAGGCTGCAAAACTGCTAA 59.187 47.619 0.50 0.00 42.51 3.09
2452 2835 1.271325 TGCTAGGCTGCAAAACTGCTA 60.271 47.619 8.79 0.00 42.51 3.49
2453 2836 0.538057 TGCTAGGCTGCAAAACTGCT 60.538 50.000 8.79 0.00 42.51 4.24
2454 2837 0.109412 CTGCTAGGCTGCAAAACTGC 60.109 55.000 11.68 0.00 42.83 4.40
2463 2846 0.953727 TGTTGTTTGCTGCTAGGCTG 59.046 50.000 0.00 0.00 0.00 4.85
2464 2847 1.242076 CTGTTGTTTGCTGCTAGGCT 58.758 50.000 0.00 0.00 0.00 4.58
2465 2848 0.954452 ACTGTTGTTTGCTGCTAGGC 59.046 50.000 0.00 0.00 0.00 3.93
2466 2849 3.138304 TGTACTGTTGTTTGCTGCTAGG 58.862 45.455 0.00 0.00 0.00 3.02
2467 2850 3.809832 ACTGTACTGTTGTTTGCTGCTAG 59.190 43.478 0.00 0.00 0.00 3.42
2468 2851 3.804036 ACTGTACTGTTGTTTGCTGCTA 58.196 40.909 0.00 0.00 0.00 3.49
2469 2852 2.614057 GACTGTACTGTTGTTTGCTGCT 59.386 45.455 6.86 0.00 0.00 4.24
2470 2853 2.614057 AGACTGTACTGTTGTTTGCTGC 59.386 45.455 6.86 0.00 0.00 5.25
2471 2854 4.084328 GCTAGACTGTACTGTTGTTTGCTG 60.084 45.833 6.86 0.00 0.00 4.41
2472 2855 4.058817 GCTAGACTGTACTGTTGTTTGCT 58.941 43.478 6.86 1.41 0.00 3.91
2473 2856 3.807622 TGCTAGACTGTACTGTTGTTTGC 59.192 43.478 6.86 8.91 0.00 3.68
2474 2857 4.084328 GCTGCTAGACTGTACTGTTGTTTG 60.084 45.833 6.86 0.00 0.00 2.93
2475 2858 4.058817 GCTGCTAGACTGTACTGTTGTTT 58.941 43.478 6.86 0.00 0.00 2.83
2476 2859 3.069586 TGCTGCTAGACTGTACTGTTGTT 59.930 43.478 6.86 0.00 0.00 2.83
2477 2860 2.628178 TGCTGCTAGACTGTACTGTTGT 59.372 45.455 6.86 0.98 0.00 3.32
2478 2861 3.303881 TGCTGCTAGACTGTACTGTTG 57.696 47.619 6.86 2.69 0.00 3.33
2479 2862 4.058817 GTTTGCTGCTAGACTGTACTGTT 58.941 43.478 6.86 0.73 0.00 3.16
2480 2863 3.069586 TGTTTGCTGCTAGACTGTACTGT 59.930 43.478 4.92 4.92 0.00 3.55
2481 2864 3.653344 TGTTTGCTGCTAGACTGTACTG 58.347 45.455 0.00 0.00 0.00 2.74
2482 2865 4.058817 GTTGTTTGCTGCTAGACTGTACT 58.941 43.478 0.00 0.00 0.00 2.73
2483 2866 3.120991 CGTTGTTTGCTGCTAGACTGTAC 60.121 47.826 0.00 0.00 0.00 2.90
2484 2867 3.057019 CGTTGTTTGCTGCTAGACTGTA 58.943 45.455 0.00 0.00 0.00 2.74
2485 2868 1.867233 CGTTGTTTGCTGCTAGACTGT 59.133 47.619 0.00 0.00 0.00 3.55
2486 2869 2.135139 TCGTTGTTTGCTGCTAGACTG 58.865 47.619 0.00 0.00 0.00 3.51
2487 2870 2.526304 TCGTTGTTTGCTGCTAGACT 57.474 45.000 0.00 0.00 0.00 3.24
2488 2871 3.678072 TGTATCGTTGTTTGCTGCTAGAC 59.322 43.478 0.00 0.00 0.00 2.59
2489 2872 3.920446 TGTATCGTTGTTTGCTGCTAGA 58.080 40.909 0.00 0.00 0.00 2.43
2490 2873 3.679980 ACTGTATCGTTGTTTGCTGCTAG 59.320 43.478 0.00 0.00 0.00 3.42
2491 2874 3.431912 CACTGTATCGTTGTTTGCTGCTA 59.568 43.478 0.00 0.00 0.00 3.49
2492 2875 2.224079 CACTGTATCGTTGTTTGCTGCT 59.776 45.455 0.00 0.00 0.00 4.24
2493 2876 2.032030 ACACTGTATCGTTGTTTGCTGC 60.032 45.455 0.00 0.00 0.00 5.25
2494 2877 3.544651 CACACTGTATCGTTGTTTGCTG 58.455 45.455 0.00 0.00 0.00 4.41
2495 2878 2.032030 GCACACTGTATCGTTGTTTGCT 60.032 45.455 0.00 0.00 35.36 3.91
2496 2879 2.032030 AGCACACTGTATCGTTGTTTGC 60.032 45.455 0.00 0.00 37.57 3.68
2497 2880 3.878086 AGCACACTGTATCGTTGTTTG 57.122 42.857 0.00 0.00 0.00 2.93
2498 2881 3.059868 CGAAGCACACTGTATCGTTGTTT 60.060 43.478 0.00 0.00 0.00 2.83
2499 2882 2.475111 CGAAGCACACTGTATCGTTGTT 59.525 45.455 0.00 0.00 0.00 2.83
2500 2883 2.058798 CGAAGCACACTGTATCGTTGT 58.941 47.619 0.00 0.00 0.00 3.32
2501 2884 2.324860 TCGAAGCACACTGTATCGTTG 58.675 47.619 9.63 0.00 35.20 4.10
2502 2885 2.717580 TCGAAGCACACTGTATCGTT 57.282 45.000 9.63 0.00 35.20 3.85
2503 2886 2.941453 ATCGAAGCACACTGTATCGT 57.059 45.000 0.00 0.00 35.20 3.73
2504 2887 3.179048 TGAATCGAAGCACACTGTATCG 58.821 45.455 0.00 5.33 34.98 2.92
2505 2888 4.177026 ACTGAATCGAAGCACACTGTATC 58.823 43.478 0.00 0.00 0.00 2.24
2506 2889 4.193826 ACTGAATCGAAGCACACTGTAT 57.806 40.909 0.00 0.00 0.00 2.29
2507 2890 3.660501 ACTGAATCGAAGCACACTGTA 57.339 42.857 0.00 0.00 0.00 2.74
2508 2891 2.533266 ACTGAATCGAAGCACACTGT 57.467 45.000 0.00 0.00 0.00 3.55
2509 2892 3.248363 TCAAACTGAATCGAAGCACACTG 59.752 43.478 0.00 0.00 0.00 3.66
2510 2893 3.466836 TCAAACTGAATCGAAGCACACT 58.533 40.909 0.00 0.00 0.00 3.55
2511 2894 3.878086 TCAAACTGAATCGAAGCACAC 57.122 42.857 0.00 0.00 0.00 3.82
2512 2895 5.008514 TCAAATCAAACTGAATCGAAGCACA 59.991 36.000 0.00 0.00 0.00 4.57
2513 2896 5.451908 TCAAATCAAACTGAATCGAAGCAC 58.548 37.500 0.00 0.00 0.00 4.40
2514 2897 5.687770 TCAAATCAAACTGAATCGAAGCA 57.312 34.783 0.00 0.00 0.00 3.91
2515 2898 5.914635 TGTTCAAATCAAACTGAATCGAAGC 59.085 36.000 0.00 0.00 34.26 3.86
2516 2899 7.355017 TCTGTTCAAATCAAACTGAATCGAAG 58.645 34.615 0.00 0.00 34.26 3.79
2517 2900 7.258022 TCTGTTCAAATCAAACTGAATCGAA 57.742 32.000 0.00 0.00 34.26 3.71
2518 2901 6.859420 TCTGTTCAAATCAAACTGAATCGA 57.141 33.333 0.00 0.00 34.26 3.59
2519 2902 7.592533 ACAATCTGTTCAAATCAAACTGAATCG 59.407 33.333 0.00 0.00 37.86 3.34
2520 2903 8.807667 ACAATCTGTTCAAATCAAACTGAATC 57.192 30.769 0.00 0.00 37.86 2.52
2522 2905 9.515020 GTTACAATCTGTTCAAATCAAACTGAA 57.485 29.630 0.00 0.00 37.86 3.02
2523 2906 8.134895 GGTTACAATCTGTTCAAATCAAACTGA 58.865 33.333 0.00 0.00 38.43 3.41
2524 2907 7.382218 GGGTTACAATCTGTTCAAATCAAACTG 59.618 37.037 0.00 0.00 0.00 3.16
2525 2908 7.069331 TGGGTTACAATCTGTTCAAATCAAACT 59.931 33.333 0.00 0.00 0.00 2.66
2526 2909 7.206687 TGGGTTACAATCTGTTCAAATCAAAC 58.793 34.615 0.00 0.00 0.00 2.93
2527 2910 7.353414 TGGGTTACAATCTGTTCAAATCAAA 57.647 32.000 0.00 0.00 0.00 2.69
2528 2911 6.968263 TGGGTTACAATCTGTTCAAATCAA 57.032 33.333 0.00 0.00 0.00 2.57
2529 2912 6.968263 TTGGGTTACAATCTGTTCAAATCA 57.032 33.333 0.00 0.00 33.18 2.57
2530 2913 8.655651 TTTTTGGGTTACAATCTGTTCAAATC 57.344 30.769 0.00 0.00 39.21 2.17
2569 2952 9.845740 ACTTTGATTGCATAATATGGTACTGTA 57.154 29.630 2.13 0.00 0.00 2.74
2570 2953 8.752005 ACTTTGATTGCATAATATGGTACTGT 57.248 30.769 2.13 0.00 0.00 3.55
2571 2954 9.454585 CAACTTTGATTGCATAATATGGTACTG 57.545 33.333 2.13 0.00 0.00 2.74
2572 2955 9.407380 TCAACTTTGATTGCATAATATGGTACT 57.593 29.630 2.13 0.00 31.01 2.73
2575 2958 8.530311 TGTTCAACTTTGATTGCATAATATGGT 58.470 29.630 2.13 0.00 37.00 3.55
2576 2959 8.929827 TGTTCAACTTTGATTGCATAATATGG 57.070 30.769 2.13 0.00 37.00 2.74
2580 2963 9.491675 TGAATTGTTCAACTTTGATTGCATAAT 57.508 25.926 0.00 0.00 36.59 1.28
2581 2964 8.883954 TGAATTGTTCAACTTTGATTGCATAA 57.116 26.923 0.00 0.00 36.59 1.90
2582 2965 8.883954 TTGAATTGTTCAACTTTGATTGCATA 57.116 26.923 1.24 0.00 44.21 3.14
2583 2966 7.789273 TTGAATTGTTCAACTTTGATTGCAT 57.211 28.000 1.24 0.00 44.21 3.96
2596 2979 6.705381 GGTGTCAAATGGAATTGAATTGTTCA 59.295 34.615 0.00 0.00 40.76 3.18
2597 2980 6.128849 CGGTGTCAAATGGAATTGAATTGTTC 60.129 38.462 0.00 0.00 40.76 3.18
2598 2981 5.695816 CGGTGTCAAATGGAATTGAATTGTT 59.304 36.000 0.00 0.00 40.76 2.83
2599 2982 5.010516 TCGGTGTCAAATGGAATTGAATTGT 59.989 36.000 0.00 0.00 40.76 2.71
2600 2983 5.468592 TCGGTGTCAAATGGAATTGAATTG 58.531 37.500 0.00 0.00 40.76 2.32
2601 2984 5.720371 TCGGTGTCAAATGGAATTGAATT 57.280 34.783 0.00 0.00 40.76 2.17
2602 2985 5.720371 TTCGGTGTCAAATGGAATTGAAT 57.280 34.783 0.00 0.00 40.76 2.57
2603 2986 5.336372 GGATTCGGTGTCAAATGGAATTGAA 60.336 40.000 0.00 0.00 40.76 2.69
2604 2987 4.157656 GGATTCGGTGTCAAATGGAATTGA 59.842 41.667 0.00 0.00 36.10 2.57
2605 2988 4.082300 TGGATTCGGTGTCAAATGGAATTG 60.082 41.667 0.00 0.00 36.10 2.32
2606 2989 4.085733 TGGATTCGGTGTCAAATGGAATT 58.914 39.130 0.00 0.00 38.98 2.17
2607 2990 3.696045 TGGATTCGGTGTCAAATGGAAT 58.304 40.909 0.00 0.00 0.00 3.01
2608 2991 3.081061 CTGGATTCGGTGTCAAATGGAA 58.919 45.455 0.00 0.00 0.00 3.53
2609 2992 2.039746 ACTGGATTCGGTGTCAAATGGA 59.960 45.455 0.00 0.00 0.00 3.41
2610 2993 2.436417 ACTGGATTCGGTGTCAAATGG 58.564 47.619 0.00 0.00 0.00 3.16
2611 2994 3.063997 GCTACTGGATTCGGTGTCAAATG 59.936 47.826 0.00 0.00 33.86 2.32
2612 2995 3.270877 GCTACTGGATTCGGTGTCAAAT 58.729 45.455 0.00 0.00 33.86 2.32
2613 2996 2.037902 TGCTACTGGATTCGGTGTCAAA 59.962 45.455 0.00 0.00 33.86 2.69
2614 2997 1.621317 TGCTACTGGATTCGGTGTCAA 59.379 47.619 0.00 0.00 33.86 3.18
2615 2998 1.262417 TGCTACTGGATTCGGTGTCA 58.738 50.000 0.00 0.00 33.86 3.58
2616 2999 2.604046 ATGCTACTGGATTCGGTGTC 57.396 50.000 0.00 0.00 33.86 3.67
2617 3000 3.009723 CAAATGCTACTGGATTCGGTGT 58.990 45.455 0.00 0.00 33.01 4.16
2618 3001 3.063997 GTCAAATGCTACTGGATTCGGTG 59.936 47.826 0.00 0.00 33.01 4.94
2619 3002 3.270877 GTCAAATGCTACTGGATTCGGT 58.729 45.455 0.00 0.00 33.01 4.69
2620 3003 3.270027 TGTCAAATGCTACTGGATTCGG 58.730 45.455 0.00 0.00 33.01 4.30
2621 3004 5.490139 AATGTCAAATGCTACTGGATTCG 57.510 39.130 0.00 0.00 33.01 3.34
2622 3005 9.294030 CTTTTAATGTCAAATGCTACTGGATTC 57.706 33.333 0.00 0.00 33.01 2.52
2623 3006 8.253113 CCTTTTAATGTCAAATGCTACTGGATT 58.747 33.333 0.00 0.00 35.72 3.01
2624 3007 7.631377 GCCTTTTAATGTCAAATGCTACTGGAT 60.631 37.037 0.00 0.00 0.00 3.41
2625 3008 6.350110 GCCTTTTAATGTCAAATGCTACTGGA 60.350 38.462 0.00 0.00 0.00 3.86
2626 3009 5.807011 GCCTTTTAATGTCAAATGCTACTGG 59.193 40.000 0.00 0.00 0.00 4.00
2627 3010 6.529125 CAGCCTTTTAATGTCAAATGCTACTG 59.471 38.462 0.00 0.00 29.71 2.74
2628 3011 6.209391 ACAGCCTTTTAATGTCAAATGCTACT 59.791 34.615 0.00 0.00 29.71 2.57
2629 3012 6.389906 ACAGCCTTTTAATGTCAAATGCTAC 58.610 36.000 0.00 0.00 29.71 3.58
2630 3013 6.588719 ACAGCCTTTTAATGTCAAATGCTA 57.411 33.333 0.00 0.00 29.71 3.49
2631 3014 5.473066 ACAGCCTTTTAATGTCAAATGCT 57.527 34.783 0.00 0.00 0.00 3.79
2632 3015 5.289434 GCTACAGCCTTTTAATGTCAAATGC 59.711 40.000 0.00 0.00 34.31 3.56
2633 3016 6.308766 GTGCTACAGCCTTTTAATGTCAAATG 59.691 38.462 0.00 0.00 41.18 2.32
2634 3017 6.015519 TGTGCTACAGCCTTTTAATGTCAAAT 60.016 34.615 0.00 0.00 41.18 2.32
2635 3018 5.300539 TGTGCTACAGCCTTTTAATGTCAAA 59.699 36.000 0.00 0.00 41.18 2.69
2636 3019 4.824537 TGTGCTACAGCCTTTTAATGTCAA 59.175 37.500 0.00 0.00 41.18 3.18
2637 3020 4.393834 TGTGCTACAGCCTTTTAATGTCA 58.606 39.130 0.00 0.00 41.18 3.58
2638 3021 5.567138 ATGTGCTACAGCCTTTTAATGTC 57.433 39.130 0.00 0.00 41.18 3.06
2639 3022 6.432783 TGTTATGTGCTACAGCCTTTTAATGT 59.567 34.615 0.00 0.00 41.18 2.71
2640 3023 6.851609 TGTTATGTGCTACAGCCTTTTAATG 58.148 36.000 0.00 0.00 41.18 1.90
2641 3024 7.461182 TTGTTATGTGCTACAGCCTTTTAAT 57.539 32.000 0.00 0.00 41.18 1.40
2642 3025 6.885952 TTGTTATGTGCTACAGCCTTTTAA 57.114 33.333 0.00 0.00 41.18 1.52
2643 3026 7.175816 TCAATTGTTATGTGCTACAGCCTTTTA 59.824 33.333 5.13 0.00 41.18 1.52
2644 3027 5.982890 ATTGTTATGTGCTACAGCCTTTT 57.017 34.783 0.00 0.00 41.18 2.27
2645 3028 5.476599 TCAATTGTTATGTGCTACAGCCTTT 59.523 36.000 5.13 0.00 41.18 3.11
2646 3029 5.009631 TCAATTGTTATGTGCTACAGCCTT 58.990 37.500 5.13 0.00 41.18 4.35
2647 3030 4.588899 TCAATTGTTATGTGCTACAGCCT 58.411 39.130 5.13 0.00 41.18 4.58
2648 3031 4.963276 TCAATTGTTATGTGCTACAGCC 57.037 40.909 5.13 0.00 41.18 4.85
2649 3032 5.230726 GCATTCAATTGTTATGTGCTACAGC 59.769 40.000 18.06 0.00 42.50 4.40
2650 3033 6.558009 AGCATTCAATTGTTATGTGCTACAG 58.442 36.000 17.37 0.00 39.43 2.74
2651 3034 6.513806 AGCATTCAATTGTTATGTGCTACA 57.486 33.333 17.37 0.00 39.43 2.74
2653 3036 7.622893 TGTAGCATTCAATTGTTATGTGCTA 57.377 32.000 19.03 19.03 41.25 3.49
2654 3037 6.513806 TGTAGCATTCAATTGTTATGTGCT 57.486 33.333 20.34 20.34 43.18 4.40
2655 3038 5.230726 GCTGTAGCATTCAATTGTTATGTGC 59.769 40.000 18.06 15.11 41.59 4.57
2656 3039 6.801367 GCTGTAGCATTCAATTGTTATGTG 57.199 37.500 18.06 8.56 41.59 3.21
2679 3062 9.976511 ATGATTACTCAATATTGGCATTTCTTG 57.023 29.630 15.36 0.00 34.37 3.02
2681 3064 8.800332 GGATGATTACTCAATATTGGCATTTCT 58.200 33.333 15.36 0.00 34.37 2.52
2682 3065 8.579006 TGGATGATTACTCAATATTGGCATTTC 58.421 33.333 15.36 8.23 34.37 2.17
2683 3066 8.481492 TGGATGATTACTCAATATTGGCATTT 57.519 30.769 15.36 0.00 34.37 2.32
2684 3067 8.528643 CATGGATGATTACTCAATATTGGCATT 58.471 33.333 15.36 0.73 34.37 3.56
2685 3068 7.672660 ACATGGATGATTACTCAATATTGGCAT 59.327 33.333 15.36 9.27 34.37 4.40
2686 3069 7.005902 ACATGGATGATTACTCAATATTGGCA 58.994 34.615 15.36 5.35 34.37 4.92
2687 3070 7.458409 ACATGGATGATTACTCAATATTGGC 57.542 36.000 15.36 0.24 34.37 4.52
2688 3071 9.506018 TGTACATGGATGATTACTCAATATTGG 57.494 33.333 15.36 8.69 34.37 3.16
2692 3075 9.898152 TTTGTGTACATGGATGATTACTCAATA 57.102 29.630 0.00 0.00 34.37 1.90
2693 3076 8.806429 TTTGTGTACATGGATGATTACTCAAT 57.194 30.769 0.00 0.00 34.37 2.57
2694 3077 8.628630 TTTTGTGTACATGGATGATTACTCAA 57.371 30.769 0.00 0.41 34.37 3.02
2695 3078 7.148255 GCTTTTGTGTACATGGATGATTACTCA 60.148 37.037 0.00 0.00 35.41 3.41
2696 3079 7.148255 TGCTTTTGTGTACATGGATGATTACTC 60.148 37.037 0.00 0.00 0.00 2.59
2697 3080 6.658816 TGCTTTTGTGTACATGGATGATTACT 59.341 34.615 0.00 0.00 0.00 2.24
2698 3081 6.851609 TGCTTTTGTGTACATGGATGATTAC 58.148 36.000 0.00 0.00 0.00 1.89
2699 3082 6.095300 CCTGCTTTTGTGTACATGGATGATTA 59.905 38.462 0.00 0.00 0.00 1.75
2700 3083 5.105635 CCTGCTTTTGTGTACATGGATGATT 60.106 40.000 0.00 0.00 0.00 2.57
2701 3084 4.400251 CCTGCTTTTGTGTACATGGATGAT 59.600 41.667 0.00 0.00 0.00 2.45
2702 3085 3.758023 CCTGCTTTTGTGTACATGGATGA 59.242 43.478 0.00 0.00 0.00 2.92
2703 3086 3.674138 GCCTGCTTTTGTGTACATGGATG 60.674 47.826 0.00 0.00 0.00 3.51
2704 3087 2.493278 GCCTGCTTTTGTGTACATGGAT 59.507 45.455 0.00 0.00 0.00 3.41
2705 3088 1.885887 GCCTGCTTTTGTGTACATGGA 59.114 47.619 0.00 0.00 0.00 3.41
2706 3089 1.067635 GGCCTGCTTTTGTGTACATGG 60.068 52.381 0.00 0.00 0.00 3.66
2707 3090 1.612950 TGGCCTGCTTTTGTGTACATG 59.387 47.619 3.32 0.00 0.00 3.21
2708 3091 1.993956 TGGCCTGCTTTTGTGTACAT 58.006 45.000 3.32 0.00 0.00 2.29
2709 3092 1.993956 ATGGCCTGCTTTTGTGTACA 58.006 45.000 3.32 0.00 0.00 2.90
2710 3093 3.243704 TGAAATGGCCTGCTTTTGTGTAC 60.244 43.478 3.32 0.00 0.00 2.90
2711 3094 2.961741 TGAAATGGCCTGCTTTTGTGTA 59.038 40.909 3.32 0.00 0.00 2.90
2712 3095 1.761784 TGAAATGGCCTGCTTTTGTGT 59.238 42.857 3.32 0.00 0.00 3.72
2713 3096 2.137523 GTGAAATGGCCTGCTTTTGTG 58.862 47.619 3.32 0.00 0.00 3.33
2714 3097 2.041701 AGTGAAATGGCCTGCTTTTGT 58.958 42.857 3.32 0.00 0.00 2.83
2715 3098 2.803956 CAAGTGAAATGGCCTGCTTTTG 59.196 45.455 3.32 0.00 0.00 2.44
2716 3099 2.435437 ACAAGTGAAATGGCCTGCTTTT 59.565 40.909 3.32 0.00 0.00 2.27
2717 3100 2.041701 ACAAGTGAAATGGCCTGCTTT 58.958 42.857 3.32 0.73 0.00 3.51
2718 3101 1.708341 ACAAGTGAAATGGCCTGCTT 58.292 45.000 3.32 0.00 0.00 3.91
2719 3102 2.162681 GTACAAGTGAAATGGCCTGCT 58.837 47.619 3.32 0.00 0.00 4.24
2720 3103 1.885887 TGTACAAGTGAAATGGCCTGC 59.114 47.619 3.32 0.00 0.00 4.85
2721 3104 3.149196 AGTGTACAAGTGAAATGGCCTG 58.851 45.455 3.32 0.00 0.00 4.85
2722 3105 3.508845 AGTGTACAAGTGAAATGGCCT 57.491 42.857 3.32 0.00 0.00 5.19
2723 3106 3.364964 CGAAGTGTACAAGTGAAATGGCC 60.365 47.826 0.00 0.00 0.00 5.36
2724 3107 3.364964 CCGAAGTGTACAAGTGAAATGGC 60.365 47.826 0.00 0.00 0.00 4.40
2725 3108 3.364964 GCCGAAGTGTACAAGTGAAATGG 60.365 47.826 0.00 0.00 0.00 3.16
2726 3109 3.364964 GGCCGAAGTGTACAAGTGAAATG 60.365 47.826 0.00 0.00 0.00 2.32
2727 3110 2.812011 GGCCGAAGTGTACAAGTGAAAT 59.188 45.455 0.00 0.00 0.00 2.17
2728 3111 2.215196 GGCCGAAGTGTACAAGTGAAA 58.785 47.619 0.00 0.00 0.00 2.69
2729 3112 1.139256 TGGCCGAAGTGTACAAGTGAA 59.861 47.619 0.00 0.00 0.00 3.18
2730 3113 0.753867 TGGCCGAAGTGTACAAGTGA 59.246 50.000 0.00 0.00 0.00 3.41
2731 3114 1.588674 TTGGCCGAAGTGTACAAGTG 58.411 50.000 0.00 0.00 0.00 3.16
2732 3115 2.335316 TTTGGCCGAAGTGTACAAGT 57.665 45.000 0.00 0.00 0.00 3.16
2733 3116 3.701532 TTTTTGGCCGAAGTGTACAAG 57.298 42.857 5.34 0.00 0.00 3.16
2750 3133 7.669089 TTTTGGGGAGTTAATCAGTCTTTTT 57.331 32.000 0.00 0.00 0.00 1.94
2751 3134 7.855784 ATTTTGGGGAGTTAATCAGTCTTTT 57.144 32.000 0.00 0.00 0.00 2.27
2752 3135 7.947890 TGTATTTTGGGGAGTTAATCAGTCTTT 59.052 33.333 0.00 0.00 0.00 2.52
2753 3136 7.466804 TGTATTTTGGGGAGTTAATCAGTCTT 58.533 34.615 0.00 0.00 0.00 3.01
2754 3137 7.027874 TGTATTTTGGGGAGTTAATCAGTCT 57.972 36.000 0.00 0.00 0.00 3.24
2755 3138 6.884836 ACTGTATTTTGGGGAGTTAATCAGTC 59.115 38.462 0.00 0.00 0.00 3.51
2756 3139 6.790319 ACTGTATTTTGGGGAGTTAATCAGT 58.210 36.000 0.00 0.00 0.00 3.41
2757 3140 8.047310 ACTACTGTATTTTGGGGAGTTAATCAG 58.953 37.037 0.00 0.00 0.00 2.90
2758 3141 7.924541 ACTACTGTATTTTGGGGAGTTAATCA 58.075 34.615 0.00 0.00 0.00 2.57
2759 3142 8.803397 AACTACTGTATTTTGGGGAGTTAATC 57.197 34.615 0.00 0.00 0.00 1.75
2761 3144 9.506018 GTTAACTACTGTATTTTGGGGAGTTAA 57.494 33.333 0.00 0.00 36.37 2.01
2762 3145 8.102676 GGTTAACTACTGTATTTTGGGGAGTTA 58.897 37.037 5.42 0.00 0.00 2.24
2763 3146 6.944290 GGTTAACTACTGTATTTTGGGGAGTT 59.056 38.462 5.42 0.00 0.00 3.01
2764 3147 6.273965 AGGTTAACTACTGTATTTTGGGGAGT 59.726 38.462 5.42 0.00 0.00 3.85
2765 3148 6.598064 CAGGTTAACTACTGTATTTTGGGGAG 59.402 42.308 5.42 0.00 0.00 4.30
2766 3149 6.044637 ACAGGTTAACTACTGTATTTTGGGGA 59.955 38.462 13.79 0.00 45.45 4.81
2767 3150 6.243148 ACAGGTTAACTACTGTATTTTGGGG 58.757 40.000 13.79 0.00 45.45 4.96
2777 3160 9.148104 GTAGTATTTTGGACAGGTTAACTACTG 57.852 37.037 5.42 7.85 40.48 2.74
2778 3161 8.316946 GGTAGTATTTTGGACAGGTTAACTACT 58.683 37.037 5.42 4.16 37.80 2.57
2779 3162 8.316946 AGGTAGTATTTTGGACAGGTTAACTAC 58.683 37.037 5.42 0.00 37.25 2.73
2780 3163 8.439964 AGGTAGTATTTTGGACAGGTTAACTA 57.560 34.615 5.42 0.00 0.00 2.24
2781 3164 7.325725 AGGTAGTATTTTGGACAGGTTAACT 57.674 36.000 5.42 0.00 0.00 2.24
2782 3165 8.939929 GTTAGGTAGTATTTTGGACAGGTTAAC 58.060 37.037 0.00 0.00 0.00 2.01
2783 3166 8.658619 TGTTAGGTAGTATTTTGGACAGGTTAA 58.341 33.333 0.00 0.00 0.00 2.01
2784 3167 8.204903 TGTTAGGTAGTATTTTGGACAGGTTA 57.795 34.615 0.00 0.00 0.00 2.85
2785 3168 7.081857 TGTTAGGTAGTATTTTGGACAGGTT 57.918 36.000 0.00 0.00 0.00 3.50
2786 3169 6.691255 TGTTAGGTAGTATTTTGGACAGGT 57.309 37.500 0.00 0.00 0.00 4.00
2787 3170 7.166167 AGTTGTTAGGTAGTATTTTGGACAGG 58.834 38.462 0.00 0.00 0.00 4.00
2788 3171 8.617290 AAGTTGTTAGGTAGTATTTTGGACAG 57.383 34.615 0.00 0.00 0.00 3.51
2789 3172 8.983702 AAAGTTGTTAGGTAGTATTTTGGACA 57.016 30.769 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.