Multiple sequence alignment - TraesCS3D01G321200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G321200 chr3D 100.000 3836 0 0 1 3836 434021882 434025717 0.000000e+00 7084
1 TraesCS3D01G321200 chr3D 92.857 280 19 1 2925 3204 145199364 145199642 4.610000e-109 405
2 TraesCS3D01G321200 chr3D 91.667 216 14 2 243 455 418491088 418490874 2.900000e-76 296
3 TraesCS3D01G321200 chr3D 91.667 216 14 2 243 455 534674273 534674059 2.900000e-76 296
4 TraesCS3D01G321200 chr3B 91.181 1270 77 18 827 2080 567245325 567246575 0.000000e+00 1692
5 TraesCS3D01G321200 chr3B 94.030 804 38 4 2077 2880 567246600 567247393 0.000000e+00 1210
6 TraesCS3D01G321200 chr3B 89.094 651 40 13 3200 3836 567247467 567248100 0.000000e+00 780
7 TraesCS3D01G321200 chr3B 95.775 213 7 2 27 239 567182682 567182892 3.670000e-90 342
8 TraesCS3D01G321200 chr3B 91.781 219 13 3 241 455 8048164 8047947 2.240000e-77 300
9 TraesCS3D01G321200 chr3A 93.508 801 36 4 2077 2869 572592804 572593596 0.000000e+00 1177
10 TraesCS3D01G321200 chr3A 93.891 442 25 2 1252 1692 572591794 572592234 0.000000e+00 665
11 TraesCS3D01G321200 chr3A 94.034 352 18 3 1732 2080 572592427 572592778 7.300000e-147 531
12 TraesCS3D01G321200 chr3A 91.545 343 13 6 860 1195 572591186 572591519 3.490000e-125 459
13 TraesCS3D01G321200 chr3A 96.482 199 7 0 41 239 572587498 572587696 2.860000e-86 329
14 TraesCS3D01G321200 chr3A 86.913 298 30 4 3200 3489 572593763 572594059 3.700000e-85 326
15 TraesCS3D01G321200 chr3A 87.931 174 15 2 544 717 562879718 562879551 2.340000e-47 200
16 TraesCS3D01G321200 chr3A 94.690 113 6 0 3724 3836 572594354 572594466 3.940000e-40 176
17 TraesCS3D01G321200 chr3A 95.506 89 4 0 713 801 572589103 572589191 3.990000e-30 143
18 TraesCS3D01G321200 chr3A 95.890 73 3 0 475 547 572589031 572589103 6.730000e-23 119
19 TraesCS3D01G321200 chr5A 93.571 280 17 1 2925 3204 377004535 377004813 2.130000e-112 416
20 TraesCS3D01G321200 chr5A 93.548 279 17 1 2925 3203 632012711 632012434 7.670000e-112 414
21 TraesCS3D01G321200 chr6B 93.818 275 16 1 2927 3201 277620591 277620318 2.760000e-111 412
22 TraesCS3D01G321200 chr6B 87.791 172 15 2 543 714 217931567 217931402 3.020000e-46 196
23 TraesCS3D01G321200 chr2A 92.958 284 19 1 2924 3207 39930535 39930253 2.760000e-111 412
24 TraesCS3D01G321200 chr2A 91.244 217 16 1 242 455 44843780 44843996 3.750000e-75 292
25 TraesCS3D01G321200 chr2A 89.474 152 11 2 244 391 698154080 698154230 1.820000e-43 187
26 TraesCS3D01G321200 chr1A 93.238 281 18 1 2924 3204 53022267 53021988 2.760000e-111 412
27 TraesCS3D01G321200 chr5B 93.214 280 16 3 2924 3203 320410910 320411186 3.570000e-110 409
28 TraesCS3D01G321200 chr5B 87.079 178 17 3 543 720 531298243 531298072 3.020000e-46 196
29 TraesCS3D01G321200 chr5B 84.000 200 24 5 534 728 119186301 119186497 6.540000e-43 185
30 TraesCS3D01G321200 chr7D 92.832 279 18 2 2925 3203 282878386 282878110 1.660000e-108 403
31 TraesCS3D01G321200 chr7D 88.068 176 14 4 544 718 86087421 86087590 6.500000e-48 202
32 TraesCS3D01G321200 chr2D 92.254 284 18 4 2920 3203 170628153 170627874 2.150000e-107 399
33 TraesCS3D01G321200 chrUn 96.226 212 7 1 244 455 323279675 323279465 2.840000e-91 346
34 TraesCS3D01G321200 chr6A 95.755 212 8 1 244 455 432537546 432537336 1.320000e-89 340
35 TraesCS3D01G321200 chr7A 91.667 216 15 1 243 455 656907332 656907547 2.900000e-76 296
36 TraesCS3D01G321200 chr7A 86.517 178 18 2 537 714 490865558 490865729 1.410000e-44 191
37 TraesCS3D01G321200 chr4A 88.571 175 14 2 544 718 30396539 30396707 1.400000e-49 207
38 TraesCS3D01G321200 chr6D 86.842 190 14 4 270 455 421048041 421048223 6.500000e-48 202
39 TraesCS3D01G321200 chr6D 85.484 186 19 5 538 722 406391352 406391530 1.820000e-43 187
40 TraesCS3D01G321200 chr1D 87.791 172 15 2 544 715 112891439 112891604 3.020000e-46 196


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G321200 chr3D 434021882 434025717 3835 False 7084.000000 7084 100.000000 1 3836 1 chr3D.!!$F2 3835
1 TraesCS3D01G321200 chr3B 567245325 567248100 2775 False 1227.333333 1692 91.435000 827 3836 3 chr3B.!!$F2 3009
2 TraesCS3D01G321200 chr3A 572587498 572594466 6968 False 436.111111 1177 93.606556 41 3836 9 chr3A.!!$F1 3795

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
59 60 0.034337 TAGTTCCCACTCACCGTTGC 59.966 55.0 0.00 0.0 34.06 4.17 F
392 446 0.041839 CAACAGCGACAGAACACTGC 60.042 55.0 0.00 0.0 35.31 4.40 F
1379 4706 0.107703 TGGTGATTGAGGCCATCGTC 60.108 55.0 5.01 0.0 0.00 4.20 F
1558 4885 0.172803 AGTCGCCTTTAGCTACACCG 59.827 55.0 0.00 0.0 39.59 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1729 5222 0.031585 CCTTGAGACGTGTTCGGACA 59.968 55.0 0.00 0.0 41.85 4.02 R
1735 5228 0.249911 GGAGTGCCTTGAGACGTGTT 60.250 55.0 0.00 0.0 0.00 3.32 R
2565 6103 0.323451 CCTCTTTGGTTGCTACCCCC 60.323 60.0 15.00 0.0 44.35 5.40 R
3513 7184 0.035317 TGTTGCCGATCTGCTGAAGT 59.965 50.0 10.62 0.0 0.00 3.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 3.477899 CAGCTTTTGTCTTCCGAATCC 57.522 47.619 0.00 0.00 0.00 3.01
21 22 3.077359 CAGCTTTTGTCTTCCGAATCCT 58.923 45.455 0.00 0.00 0.00 3.24
22 23 3.503748 CAGCTTTTGTCTTCCGAATCCTT 59.496 43.478 0.00 0.00 0.00 3.36
23 24 4.022849 CAGCTTTTGTCTTCCGAATCCTTT 60.023 41.667 0.00 0.00 0.00 3.11
24 25 4.584743 AGCTTTTGTCTTCCGAATCCTTTT 59.415 37.500 0.00 0.00 0.00 2.27
25 26 5.069119 AGCTTTTGTCTTCCGAATCCTTTTT 59.931 36.000 0.00 0.00 0.00 1.94
59 60 0.034337 TAGTTCCCACTCACCGTTGC 59.966 55.000 0.00 0.00 34.06 4.17
76 77 0.110486 TGCCCCCTCTCACTTTTCAC 59.890 55.000 0.00 0.00 0.00 3.18
78 79 1.068121 CCCCCTCTCACTTTTCACCT 58.932 55.000 0.00 0.00 0.00 4.00
231 232 4.440826 TCGGGAAGAAGATCTAGCTACT 57.559 45.455 0.00 0.00 0.00 2.57
239 240 7.984617 GGAAGAAGATCTAGCTACTTTCAATGT 59.015 37.037 0.00 0.00 0.00 2.71
242 243 9.810545 AGAAGATCTAGCTACTTTCAATGTTAC 57.189 33.333 0.00 0.00 0.00 2.50
243 244 8.635877 AAGATCTAGCTACTTTCAATGTTACG 57.364 34.615 0.00 0.00 0.00 3.18
244 245 7.203910 AGATCTAGCTACTTTCAATGTTACGG 58.796 38.462 0.00 0.00 0.00 4.02
246 247 6.327934 TCTAGCTACTTTCAATGTTACGGAC 58.672 40.000 0.00 0.00 0.00 4.79
247 248 5.148651 AGCTACTTTCAATGTTACGGACT 57.851 39.130 0.00 0.00 0.00 3.85
248 249 4.929808 AGCTACTTTCAATGTTACGGACTG 59.070 41.667 0.00 0.00 0.00 3.51
250 251 5.062308 GCTACTTTCAATGTTACGGACTGAG 59.938 44.000 0.00 0.00 0.00 3.35
252 253 5.794894 ACTTTCAATGTTACGGACTGAGAT 58.205 37.500 0.00 0.00 0.00 2.75
253 254 5.869888 ACTTTCAATGTTACGGACTGAGATC 59.130 40.000 0.00 0.00 0.00 2.75
254 255 4.386867 TCAATGTTACGGACTGAGATCC 57.613 45.455 0.00 0.00 35.16 3.36
269 270 5.152623 TGAGATCCAGTAACTTCACTTGG 57.847 43.478 0.00 0.00 0.00 3.61
270 271 4.593206 TGAGATCCAGTAACTTCACTTGGT 59.407 41.667 0.00 0.00 0.00 3.67
271 272 4.899502 AGATCCAGTAACTTCACTTGGTG 58.100 43.478 0.00 0.00 34.45 4.17
272 273 4.593206 AGATCCAGTAACTTCACTTGGTGA 59.407 41.667 0.00 0.00 41.09 4.02
280 281 2.684001 TTCACTTGGTGAAGTCACGT 57.316 45.000 8.75 0.00 45.88 4.49
281 282 2.980568 TTCACTTGGTGAAGTCACGTT 58.019 42.857 8.75 0.00 45.88 3.99
282 283 2.675844 TTCACTTGGTGAAGTCACGTTG 59.324 45.455 8.75 1.06 45.88 4.10
283 284 5.020071 TTCACTTGGTGAAGTCACGTTGC 62.020 47.826 8.75 0.00 45.88 4.17
289 290 3.131240 GTGAAGTCACGTTGCAACTTT 57.869 42.857 26.09 11.12 37.10 2.66
290 291 4.267357 GTGAAGTCACGTTGCAACTTTA 57.733 40.909 26.09 6.94 37.10 1.85
291 292 4.271687 GTGAAGTCACGTTGCAACTTTAG 58.728 43.478 26.09 13.61 37.10 1.85
293 294 1.602377 AGTCACGTTGCAACTTTAGGC 59.398 47.619 26.09 14.41 0.00 3.93
294 295 1.602377 GTCACGTTGCAACTTTAGGCT 59.398 47.619 26.09 0.00 0.00 4.58
295 296 1.871039 TCACGTTGCAACTTTAGGCTC 59.129 47.619 26.09 0.00 0.00 4.70
297 298 2.290641 CACGTTGCAACTTTAGGCTCTT 59.709 45.455 26.09 0.00 0.00 2.85
298 299 2.548480 ACGTTGCAACTTTAGGCTCTTC 59.452 45.455 26.09 0.00 0.00 2.87
300 301 3.189287 CGTTGCAACTTTAGGCTCTTCAT 59.811 43.478 26.09 0.00 0.00 2.57
301 302 4.670221 CGTTGCAACTTTAGGCTCTTCATC 60.670 45.833 26.09 0.00 0.00 2.92
302 303 4.292186 TGCAACTTTAGGCTCTTCATCT 57.708 40.909 0.00 0.00 0.00 2.90
303 304 4.256920 TGCAACTTTAGGCTCTTCATCTC 58.743 43.478 0.00 0.00 0.00 2.75
304 305 3.625313 GCAACTTTAGGCTCTTCATCTCC 59.375 47.826 0.00 0.00 0.00 3.71
306 307 5.435291 CAACTTTAGGCTCTTCATCTCCAT 58.565 41.667 0.00 0.00 0.00 3.41
307 308 5.289083 ACTTTAGGCTCTTCATCTCCATC 57.711 43.478 0.00 0.00 0.00 3.51
308 309 4.102367 ACTTTAGGCTCTTCATCTCCATCC 59.898 45.833 0.00 0.00 0.00 3.51
310 311 2.485659 AGGCTCTTCATCTCCATCCAA 58.514 47.619 0.00 0.00 0.00 3.53
311 312 2.848694 AGGCTCTTCATCTCCATCCAAA 59.151 45.455 0.00 0.00 0.00 3.28
313 314 4.079327 AGGCTCTTCATCTCCATCCAAAAT 60.079 41.667 0.00 0.00 0.00 1.82
316 317 6.294473 GCTCTTCATCTCCATCCAAAATAGA 58.706 40.000 0.00 0.00 0.00 1.98
317 318 6.941436 GCTCTTCATCTCCATCCAAAATAGAT 59.059 38.462 0.00 0.00 0.00 1.98
318 319 7.119553 GCTCTTCATCTCCATCCAAAATAGATC 59.880 40.741 0.00 0.00 0.00 2.75
319 320 7.456725 TCTTCATCTCCATCCAAAATAGATCC 58.543 38.462 0.00 0.00 0.00 3.36
322 376 7.000472 TCATCTCCATCCAAAATAGATCCAAC 59.000 38.462 0.00 0.00 0.00 3.77
324 378 4.460263 TCCATCCAAAATAGATCCAACGG 58.540 43.478 0.00 0.00 0.00 4.44
328 382 3.264706 TCCAAAATAGATCCAACGGTCCA 59.735 43.478 0.00 0.00 0.00 4.02
332 386 6.149474 CCAAAATAGATCCAACGGTCCATATC 59.851 42.308 0.00 0.00 0.00 1.63
333 387 6.433847 AAATAGATCCAACGGTCCATATCA 57.566 37.500 0.00 0.00 0.00 2.15
335 389 4.277515 AGATCCAACGGTCCATATCATG 57.722 45.455 0.00 0.00 0.00 3.07
336 390 2.254546 TCCAACGGTCCATATCATGC 57.745 50.000 0.00 0.00 0.00 4.06
339 393 2.687425 CCAACGGTCCATATCATGCAAA 59.313 45.455 0.00 0.00 0.00 3.68
363 417 1.780503 AAAAAGCTCACTTGGCCAGT 58.219 45.000 5.11 3.46 35.85 4.00
364 418 1.780503 AAAAGCTCACTTGGCCAGTT 58.219 45.000 5.11 0.00 35.85 3.16
365 419 1.780503 AAAGCTCACTTGGCCAGTTT 58.219 45.000 5.11 0.00 35.85 2.66
366 420 1.780503 AAGCTCACTTGGCCAGTTTT 58.219 45.000 5.11 0.00 33.84 2.43
367 421 1.035139 AGCTCACTTGGCCAGTTTTG 58.965 50.000 5.11 1.82 30.92 2.44
368 422 0.598419 GCTCACTTGGCCAGTTTTGC 60.598 55.000 5.11 5.93 30.92 3.68
369 423 0.746063 CTCACTTGGCCAGTTTTGCA 59.254 50.000 5.11 0.00 30.92 4.08
370 424 0.746063 TCACTTGGCCAGTTTTGCAG 59.254 50.000 5.11 0.16 30.92 4.41
371 425 0.877213 CACTTGGCCAGTTTTGCAGC 60.877 55.000 5.11 0.00 30.92 5.25
372 426 1.301165 CTTGGCCAGTTTTGCAGCC 60.301 57.895 5.11 5.48 45.96 4.85
374 428 3.233231 GGCCAGTTTTGCAGCCCA 61.233 61.111 0.00 0.00 39.60 5.36
375 429 2.806009 GGCCAGTTTTGCAGCCCAA 61.806 57.895 0.00 0.00 39.60 4.12
377 431 1.821936 CCAGTTTTGCAGCCCAACA 59.178 52.632 6.58 0.00 31.97 3.33
378 432 0.249573 CCAGTTTTGCAGCCCAACAG 60.250 55.000 6.58 0.00 31.97 3.16
379 433 0.877213 CAGTTTTGCAGCCCAACAGC 60.877 55.000 6.58 0.00 31.97 4.40
381 435 2.124060 TTTTGCAGCCCAACAGCGA 61.124 52.632 0.00 0.00 38.01 4.93
383 437 4.560743 TGCAGCCCAACAGCGACA 62.561 61.111 0.00 0.00 38.01 4.35
384 438 3.730761 GCAGCCCAACAGCGACAG 61.731 66.667 0.00 0.00 38.01 3.51
385 439 2.031012 CAGCCCAACAGCGACAGA 59.969 61.111 0.00 0.00 38.01 3.41
386 440 1.597854 CAGCCCAACAGCGACAGAA 60.598 57.895 0.00 0.00 38.01 3.02
388 442 1.891919 GCCCAACAGCGACAGAACA 60.892 57.895 0.00 0.00 0.00 3.18
389 443 1.941812 CCCAACAGCGACAGAACAC 59.058 57.895 0.00 0.00 0.00 3.32
391 445 0.583438 CCAACAGCGACAGAACACTG 59.417 55.000 0.00 0.00 37.63 3.66
392 446 0.041839 CAACAGCGACAGAACACTGC 60.042 55.000 0.00 0.00 35.31 4.40
393 447 0.179073 AACAGCGACAGAACACTGCT 60.179 50.000 0.00 0.00 35.31 4.24
395 449 1.372251 AGCGACAGAACACTGCTCG 60.372 57.895 0.00 0.00 37.76 5.03
396 450 1.661821 GCGACAGAACACTGCTCGT 60.662 57.895 16.41 0.00 37.43 4.18
398 452 1.607713 CGACAGAACACTGCTCGTAG 58.392 55.000 0.00 0.00 35.31 3.51
401 455 2.164624 GACAGAACACTGCTCGTAGGAT 59.835 50.000 0.00 0.00 35.31 3.24
402 456 2.563179 ACAGAACACTGCTCGTAGGATT 59.437 45.455 0.00 0.00 35.31 3.01
405 459 2.949451 ACACTGCTCGTAGGATTCAG 57.051 50.000 11.14 11.14 0.00 3.02
406 460 2.171840 ACACTGCTCGTAGGATTCAGT 58.828 47.619 12.09 12.09 36.76 3.41
407 461 2.563179 ACACTGCTCGTAGGATTCAGTT 59.437 45.455 14.15 7.03 35.21 3.16
408 462 3.762288 ACACTGCTCGTAGGATTCAGTTA 59.238 43.478 14.15 0.00 35.21 2.24
409 463 4.219944 ACACTGCTCGTAGGATTCAGTTAA 59.780 41.667 14.15 0.00 35.21 2.01
411 465 5.637810 CACTGCTCGTAGGATTCAGTTAAAA 59.362 40.000 14.15 0.00 35.21 1.52
413 467 5.543714 TGCTCGTAGGATTCAGTTAAAACA 58.456 37.500 0.00 0.00 0.00 2.83
414 468 5.637810 TGCTCGTAGGATTCAGTTAAAACAG 59.362 40.000 0.00 0.00 0.00 3.16
415 469 5.867716 GCTCGTAGGATTCAGTTAAAACAGA 59.132 40.000 0.00 0.00 0.00 3.41
416 470 6.535508 GCTCGTAGGATTCAGTTAAAACAGAT 59.464 38.462 0.00 0.00 0.00 2.90
417 471 7.064728 GCTCGTAGGATTCAGTTAAAACAGATT 59.935 37.037 0.00 0.00 0.00 2.40
418 472 9.582431 CTCGTAGGATTCAGTTAAAACAGATTA 57.418 33.333 0.00 0.00 0.00 1.75
419 473 9.362539 TCGTAGGATTCAGTTAAAACAGATTAC 57.637 33.333 0.00 0.00 0.00 1.89
420 474 9.146984 CGTAGGATTCAGTTAAAACAGATTACA 57.853 33.333 0.00 0.00 0.00 2.41
423 477 8.462016 AGGATTCAGTTAAAACAGATTACATGC 58.538 33.333 0.00 0.00 0.00 4.06
424 478 7.702348 GGATTCAGTTAAAACAGATTACATGCC 59.298 37.037 0.00 0.00 0.00 4.40
425 479 7.517614 TTCAGTTAAAACAGATTACATGCCA 57.482 32.000 0.00 0.00 0.00 4.92
427 481 7.367285 TCAGTTAAAACAGATTACATGCCAAC 58.633 34.615 0.00 0.00 0.00 3.77
428 482 7.230510 TCAGTTAAAACAGATTACATGCCAACT 59.769 33.333 0.00 0.00 0.00 3.16
430 484 9.243105 AGTTAAAACAGATTACATGCCAACTAT 57.757 29.630 0.00 0.00 0.00 2.12
431 485 9.503427 GTTAAAACAGATTACATGCCAACTATC 57.497 33.333 0.00 0.00 0.00 2.08
432 486 7.944729 AAAACAGATTACATGCCAACTATCT 57.055 32.000 0.00 0.00 0.00 1.98
435 489 9.632638 AAACAGATTACATGCCAACTATCTAAT 57.367 29.630 0.00 0.00 0.00 1.73
436 490 8.839310 ACAGATTACATGCCAACTATCTAATC 57.161 34.615 0.00 0.00 0.00 1.75
437 491 8.654997 ACAGATTACATGCCAACTATCTAATCT 58.345 33.333 0.00 0.00 32.27 2.40
438 492 9.499479 CAGATTACATGCCAACTATCTAATCTT 57.501 33.333 6.67 0.00 30.53 2.40
439 493 9.717942 AGATTACATGCCAACTATCTAATCTTC 57.282 33.333 0.00 0.00 29.22 2.87
442 496 9.851686 TTACATGCCAACTATCTAATCTTCATT 57.148 29.630 0.00 0.00 0.00 2.57
444 498 8.844244 ACATGCCAACTATCTAATCTTCATTTC 58.156 33.333 0.00 0.00 0.00 2.17
446 500 8.442632 TGCCAACTATCTAATCTTCATTTCTG 57.557 34.615 0.00 0.00 0.00 3.02
447 501 8.267183 TGCCAACTATCTAATCTTCATTTCTGA 58.733 33.333 0.00 0.00 0.00 3.27
448 502 9.113838 GCCAACTATCTAATCTTCATTTCTGAA 57.886 33.333 0.00 0.00 39.07 3.02
519 1619 0.322975 ACATCTTCTTGGAGCAGCGT 59.677 50.000 0.00 0.00 0.00 5.07
525 1625 1.448540 CTTGGAGCAGCGTTCCGAT 60.449 57.895 6.87 0.00 37.54 4.18
536 1636 0.744414 CGTTCCGATGCCTTGGATGT 60.744 55.000 0.00 0.00 34.73 3.06
547 1647 6.128007 CGATGCCTTGGATGTAAAAGTTACTT 60.128 38.462 0.00 0.00 0.00 2.24
548 1648 6.569179 TGCCTTGGATGTAAAAGTTACTTC 57.431 37.500 0.00 5.79 0.00 3.01
549 1649 5.475564 TGCCTTGGATGTAAAAGTTACTTCC 59.524 40.000 19.05 19.05 40.29 3.46
550 1650 5.710567 GCCTTGGATGTAAAAGTTACTTCCT 59.289 40.000 23.13 0.00 40.43 3.36
551 1651 6.127980 GCCTTGGATGTAAAAGTTACTTCCTC 60.128 42.308 23.13 12.49 40.43 3.71
552 1652 7.168905 CCTTGGATGTAAAAGTTACTTCCTCT 58.831 38.462 23.13 0.00 40.43 3.69
553 1653 7.119846 CCTTGGATGTAAAAGTTACTTCCTCTG 59.880 40.741 23.13 16.15 40.43 3.35
554 1654 7.074653 TGGATGTAAAAGTTACTTCCTCTGT 57.925 36.000 23.13 0.00 40.43 3.41
555 1655 7.514721 TGGATGTAAAAGTTACTTCCTCTGTT 58.485 34.615 23.13 0.00 40.43 3.16
556 1656 7.996644 TGGATGTAAAAGTTACTTCCTCTGTTT 59.003 33.333 23.13 0.00 40.43 2.83
557 1657 8.504815 GGATGTAAAAGTTACTTCCTCTGTTTC 58.495 37.037 18.78 0.00 38.20 2.78
558 1658 9.274206 GATGTAAAAGTTACTTCCTCTGTTTCT 57.726 33.333 0.00 0.00 0.00 2.52
570 1670 9.495382 ACTTCCTCTGTTTCTAAATATAGGTCT 57.505 33.333 4.36 0.00 29.41 3.85
591 1691 9.495572 AGGTCTTTCTAGAGATTTTAACAAGTG 57.504 33.333 0.00 0.00 0.00 3.16
592 1692 9.490379 GGTCTTTCTAGAGATTTTAACAAGTGA 57.510 33.333 0.00 0.00 0.00 3.41
614 1714 9.672673 AGTGACTATATACAAAGCAAAATGAGT 57.327 29.630 0.00 0.00 0.00 3.41
615 1715 9.708222 GTGACTATATACAAAGCAAAATGAGTG 57.292 33.333 0.00 0.00 0.00 3.51
616 1716 9.665719 TGACTATATACAAAGCAAAATGAGTGA 57.334 29.630 0.00 0.00 0.00 3.41
619 1719 9.722056 CTATATACAAAGCAAAATGAGTGAACC 57.278 33.333 0.00 0.00 0.00 3.62
620 1720 6.655078 ATACAAAGCAAAATGAGTGAACCT 57.345 33.333 0.00 0.00 0.00 3.50
621 1721 7.759489 ATACAAAGCAAAATGAGTGAACCTA 57.241 32.000 0.00 0.00 0.00 3.08
622 1722 6.655078 ACAAAGCAAAATGAGTGAACCTAT 57.345 33.333 0.00 0.00 0.00 2.57
623 1723 7.759489 ACAAAGCAAAATGAGTGAACCTATA 57.241 32.000 0.00 0.00 0.00 1.31
624 1724 7.593825 ACAAAGCAAAATGAGTGAACCTATAC 58.406 34.615 0.00 0.00 0.00 1.47
625 1725 7.448469 ACAAAGCAAAATGAGTGAACCTATACT 59.552 33.333 0.00 0.00 0.00 2.12
626 1726 7.617041 AAGCAAAATGAGTGAACCTATACTC 57.383 36.000 0.00 0.00 42.77 2.59
627 1727 6.951971 AGCAAAATGAGTGAACCTATACTCT 58.048 36.000 0.00 0.00 42.86 3.24
628 1728 8.079211 AGCAAAATGAGTGAACCTATACTCTA 57.921 34.615 0.00 0.00 42.86 2.43
629 1729 8.540388 AGCAAAATGAGTGAACCTATACTCTAA 58.460 33.333 0.00 0.00 42.86 2.10
630 1730 9.162764 GCAAAATGAGTGAACCTATACTCTAAA 57.837 33.333 0.00 0.00 42.86 1.85
666 1766 8.797438 CATACATCTACATCTGTATGTGGTAGT 58.203 37.037 12.36 4.82 45.99 2.73
667 1767 7.278461 ACATCTACATCTGTATGTGGTAGTC 57.722 40.000 1.34 0.00 45.99 2.59
668 1768 6.265649 ACATCTACATCTGTATGTGGTAGTCC 59.734 42.308 1.34 0.00 45.99 3.85
669 1769 5.762279 TCTACATCTGTATGTGGTAGTCCA 58.238 41.667 1.34 0.00 45.99 4.02
670 1770 6.373759 TCTACATCTGTATGTGGTAGTCCAT 58.626 40.000 1.34 0.00 45.99 3.41
671 1771 5.957771 ACATCTGTATGTGGTAGTCCATT 57.042 39.130 0.00 0.00 44.79 3.16
672 1772 6.313519 ACATCTGTATGTGGTAGTCCATTT 57.686 37.500 0.00 0.00 44.79 2.32
673 1773 6.115446 ACATCTGTATGTGGTAGTCCATTTG 58.885 40.000 0.00 0.00 44.79 2.32
674 1774 6.070251 ACATCTGTATGTGGTAGTCCATTTGA 60.070 38.462 0.00 0.00 44.79 2.69
675 1775 6.367374 TCTGTATGTGGTAGTCCATTTGAA 57.633 37.500 0.00 0.00 46.20 2.69
676 1776 6.774673 TCTGTATGTGGTAGTCCATTTGAAA 58.225 36.000 0.00 0.00 46.20 2.69
677 1777 7.402054 TCTGTATGTGGTAGTCCATTTGAAAT 58.598 34.615 0.00 0.00 46.20 2.17
678 1778 7.552687 TCTGTATGTGGTAGTCCATTTGAAATC 59.447 37.037 0.00 0.00 46.20 2.17
679 1779 7.402054 TGTATGTGGTAGTCCATTTGAAATCT 58.598 34.615 0.00 0.00 46.20 2.40
680 1780 7.552687 TGTATGTGGTAGTCCATTTGAAATCTC 59.447 37.037 0.00 0.00 46.20 2.75
681 1781 6.126863 TGTGGTAGTCCATTTGAAATCTCT 57.873 37.500 0.00 0.00 46.20 3.10
682 1782 7.252612 TGTGGTAGTCCATTTGAAATCTCTA 57.747 36.000 0.00 0.00 46.20 2.43
683 1783 7.685481 TGTGGTAGTCCATTTGAAATCTCTAA 58.315 34.615 0.00 0.00 46.20 2.10
684 1784 8.160765 TGTGGTAGTCCATTTGAAATCTCTAAA 58.839 33.333 0.00 0.00 46.20 1.85
685 1785 9.010029 GTGGTAGTCCATTTGAAATCTCTAAAA 57.990 33.333 0.00 0.00 46.20 1.52
686 1786 9.581289 TGGTAGTCCATTTGAAATCTCTAAAAA 57.419 29.630 0.00 0.00 39.03 1.94
690 1790 9.579932 AGTCCATTTGAAATCTCTAAAAAGACT 57.420 29.630 0.00 0.00 0.00 3.24
711 1811 9.907229 AAGACTTATATTTAAGAACAGGGGAAG 57.093 33.333 9.58 0.00 38.56 3.46
712 1812 9.059023 AGACTTATATTTAAGAACAGGGGAAGT 57.941 33.333 9.58 0.00 38.56 3.01
755 1855 9.661954 ACAGATATCCTCTAAGAATTTGACCTA 57.338 33.333 0.00 0.00 31.13 3.08
796 1896 9.747898 TTTTTCCTTATATGGAAGTTGCTCTAA 57.252 29.630 17.04 6.52 45.58 2.10
797 1897 8.732746 TTTCCTTATATGGAAGTTGCTCTAAC 57.267 34.615 17.04 0.00 45.58 2.34
798 1898 6.513180 TCCTTATATGGAAGTTGCTCTAACG 58.487 40.000 4.89 0.00 44.15 3.18
799 1899 6.097839 TCCTTATATGGAAGTTGCTCTAACGT 59.902 38.462 4.89 0.00 44.15 3.99
800 1900 6.421202 CCTTATATGGAAGTTGCTCTAACGTC 59.579 42.308 0.00 0.00 44.03 4.34
803 1903 1.723220 GAAGTTGCTCTAACGTCCCC 58.277 55.000 0.00 0.00 44.15 4.81
804 1904 0.323957 AAGTTGCTCTAACGTCCCCC 59.676 55.000 0.00 0.00 44.15 5.40
805 1905 1.447314 GTTGCTCTAACGTCCCCCG 60.447 63.158 0.00 0.00 44.03 5.73
806 1906 3.305177 TTGCTCTAACGTCCCCCGC 62.305 63.158 0.00 0.00 41.42 6.13
807 1907 3.766691 GCTCTAACGTCCCCCGCA 61.767 66.667 0.00 0.00 41.42 5.69
808 1908 2.975536 CTCTAACGTCCCCCGCAA 59.024 61.111 0.00 0.00 41.42 4.85
809 1909 1.294138 CTCTAACGTCCCCCGCAAA 59.706 57.895 0.00 0.00 41.42 3.68
810 1910 0.320946 CTCTAACGTCCCCCGCAAAA 60.321 55.000 0.00 0.00 41.42 2.44
811 1911 0.108207 TCTAACGTCCCCCGCAAAAA 59.892 50.000 0.00 0.00 41.42 1.94
888 3966 3.043999 AAGCAGTATCGGCCCCACC 62.044 63.158 0.00 0.00 0.00 4.61
893 3971 3.087253 TATCGGCCCCACCACCAG 61.087 66.667 0.00 0.00 39.03 4.00
915 4008 1.889573 GCCAGAGAATACGCCCAGC 60.890 63.158 0.00 0.00 0.00 4.85
945 4038 2.320587 GCAGGTGCAGAGAACACGG 61.321 63.158 0.00 0.00 41.59 4.94
966 4059 0.460311 ACGGAAGGCAGAGATAACCG 59.540 55.000 0.00 0.00 43.61 4.44
969 4062 1.291132 GAAGGCAGAGATAACCGCAC 58.709 55.000 0.00 0.00 0.00 5.34
975 4068 2.422597 CAGAGATAACCGCACCAAACA 58.577 47.619 0.00 0.00 0.00 2.83
976 4069 2.811431 CAGAGATAACCGCACCAAACAA 59.189 45.455 0.00 0.00 0.00 2.83
977 4070 3.252215 CAGAGATAACCGCACCAAACAAA 59.748 43.478 0.00 0.00 0.00 2.83
978 4071 3.252458 AGAGATAACCGCACCAAACAAAC 59.748 43.478 0.00 0.00 0.00 2.93
979 4072 3.219281 AGATAACCGCACCAAACAAACT 58.781 40.909 0.00 0.00 0.00 2.66
980 4073 2.853731 TAACCGCACCAAACAAACTG 57.146 45.000 0.00 0.00 0.00 3.16
981 4074 1.178276 AACCGCACCAAACAAACTGA 58.822 45.000 0.00 0.00 0.00 3.41
982 4075 1.178276 ACCGCACCAAACAAACTGAA 58.822 45.000 0.00 0.00 0.00 3.02
983 4076 1.135228 ACCGCACCAAACAAACTGAAC 60.135 47.619 0.00 0.00 0.00 3.18
1005 4098 1.438651 CGAAGAAACGAAGCATGGGA 58.561 50.000 0.00 0.00 35.09 4.37
1179 4272 1.532794 CATCTCCTCCTCCCTCGGG 60.533 68.421 0.00 0.00 0.00 5.14
1222 4315 3.391382 CCCAGGTGAGGACCCGAC 61.391 72.222 0.00 0.00 44.40 4.79
1282 4609 3.784701 TGACATTTCTAGTCTCGCCTC 57.215 47.619 0.00 0.00 36.94 4.70
1379 4706 0.107703 TGGTGATTGAGGCCATCGTC 60.108 55.000 5.01 0.00 0.00 4.20
1392 4719 4.366603 TCGTCGAGTCCGAAGACA 57.633 55.556 0.00 0.00 45.54 3.41
1442 4769 1.707427 AGGATCACCAAACCTTCTGCT 59.293 47.619 0.00 0.00 38.94 4.24
1490 4817 0.759346 CTATAACCCGGCTTGCCTCT 59.241 55.000 10.12 0.00 0.00 3.69
1497 4824 2.512515 GGCTTGCCTCTGCTACCG 60.513 66.667 4.11 0.00 38.71 4.02
1530 4857 2.859992 GTGACCACCAATCTGGCTC 58.140 57.895 0.00 0.00 42.67 4.70
1545 4872 1.882167 GCTCATCTCAGCAGTCGCC 60.882 63.158 0.00 0.00 39.43 5.54
1558 4885 0.172803 AGTCGCCTTTAGCTACACCG 59.827 55.000 0.00 0.00 39.59 4.94
1563 4890 1.338389 GCCTTTAGCTACACCGGTTGA 60.338 52.381 2.97 0.00 38.99 3.18
1693 5186 1.805345 GCCTCTGTCATGCATGCTATC 59.195 52.381 22.25 11.92 0.00 2.08
1718 5211 6.425114 CACATAGGATTGCATACTCTACAACC 59.575 42.308 0.00 0.00 0.00 3.77
1728 5221 5.521735 GCATACTCTACAACCTCAGAACATG 59.478 44.000 0.00 0.00 0.00 3.21
1729 5222 6.634805 CATACTCTACAACCTCAGAACATGT 58.365 40.000 0.00 0.00 0.00 3.21
1730 5223 4.887748 ACTCTACAACCTCAGAACATGTG 58.112 43.478 0.00 0.00 0.00 3.21
1731 5224 4.345257 ACTCTACAACCTCAGAACATGTGT 59.655 41.667 0.00 0.00 0.00 3.72
1732 5225 4.883083 TCTACAACCTCAGAACATGTGTC 58.117 43.478 0.00 0.00 0.00 3.67
1733 5226 2.851195 ACAACCTCAGAACATGTGTCC 58.149 47.619 0.00 0.00 0.00 4.02
1734 5227 1.800586 CAACCTCAGAACATGTGTCCG 59.199 52.381 0.00 0.00 0.00 4.79
1735 5228 1.338107 ACCTCAGAACATGTGTCCGA 58.662 50.000 0.00 0.00 0.00 4.55
1736 5229 1.691976 ACCTCAGAACATGTGTCCGAA 59.308 47.619 0.00 0.00 0.00 4.30
1737 5230 2.069273 CCTCAGAACATGTGTCCGAAC 58.931 52.381 0.00 0.00 0.00 3.95
1738 5231 2.547855 CCTCAGAACATGTGTCCGAACA 60.548 50.000 0.00 0.00 0.00 3.18
1816 5323 6.262273 TCTTTATTGTTTTTGGAGCGTCTCTT 59.738 34.615 6.78 0.00 0.00 2.85
1819 5326 2.612212 TGTTTTTGGAGCGTCTCTTCAC 59.388 45.455 6.78 0.22 27.50 3.18
2006 5513 0.617535 TGCCCTGCCTAAGCTCACTA 60.618 55.000 0.00 0.00 40.80 2.74
2007 5514 0.541863 GCCCTGCCTAAGCTCACTAA 59.458 55.000 0.00 0.00 40.80 2.24
2008 5515 1.474143 GCCCTGCCTAAGCTCACTAAG 60.474 57.143 0.00 0.00 40.80 2.18
2107 5644 3.685836 AGCGTTCTGTAAACACAAACC 57.314 42.857 0.00 0.00 0.00 3.27
2154 5691 6.483385 TTCGTTGAGAACACAACAAACTTA 57.517 33.333 13.40 0.00 46.96 2.24
2205 5742 6.768641 AGGTCCCAAGTTAGTTTTTACCTA 57.231 37.500 0.00 0.00 33.17 3.08
2216 5753 9.319060 AGTTAGTTTTTACCTAGTAACCTAGCT 57.681 33.333 0.00 0.00 39.56 3.32
2266 5803 3.321682 CCTTTGAAAGACCTCATTTGGCA 59.678 43.478 6.49 0.00 0.00 4.92
2303 5840 5.046950 GGTGTGAACAATATTTTTAGCCCCA 60.047 40.000 0.00 0.00 0.00 4.96
2304 5841 6.459923 GTGTGAACAATATTTTTAGCCCCAA 58.540 36.000 0.00 0.00 0.00 4.12
2305 5842 6.589907 GTGTGAACAATATTTTTAGCCCCAAG 59.410 38.462 0.00 0.00 0.00 3.61
2348 5885 8.357402 CCTACTAAACCACTTAAAATTTGTGCT 58.643 33.333 0.00 0.00 0.00 4.40
2565 6103 2.058057 GCATTTTGGGCACTTTACACG 58.942 47.619 0.00 0.00 0.00 4.49
2592 6130 2.026822 AGCAACCAAAGAGGACATCGAT 60.027 45.455 0.00 0.00 41.22 3.59
2613 6151 2.268920 GGGATGAAGCTCGGCACA 59.731 61.111 0.00 0.00 0.00 4.57
2784 6322 0.544595 AGAAGCGGGGACTAGGTGTT 60.545 55.000 0.00 0.00 0.00 3.32
2811 6349 1.859302 ACGGGAGAAGCTCTTCATCT 58.141 50.000 11.69 0.00 41.84 2.90
2869 6414 3.114693 GCTGTTGAGCGAAGAAATGAG 57.885 47.619 0.00 0.00 34.87 2.90
2904 6560 0.763035 AGGTGGTACTTGTGGTCACC 59.237 55.000 7.01 7.01 45.86 4.02
2923 6580 1.334869 CCAAGCATCGGAATAACAGGC 59.665 52.381 0.00 0.00 0.00 4.85
2924 6581 2.292267 CAAGCATCGGAATAACAGGCT 58.708 47.619 0.00 0.00 0.00 4.58
2925 6582 2.684881 CAAGCATCGGAATAACAGGCTT 59.315 45.455 0.00 0.00 40.41 4.35
2926 6583 3.838244 AGCATCGGAATAACAGGCTTA 57.162 42.857 0.00 0.00 0.00 3.09
2927 6584 3.733337 AGCATCGGAATAACAGGCTTAG 58.267 45.455 0.00 0.00 0.00 2.18
2928 6585 2.808543 GCATCGGAATAACAGGCTTAGG 59.191 50.000 0.00 0.00 0.00 2.69
2929 6586 3.403038 CATCGGAATAACAGGCTTAGGG 58.597 50.000 0.00 0.00 0.00 3.53
2930 6587 1.140252 TCGGAATAACAGGCTTAGGGC 59.860 52.381 0.00 0.00 40.90 5.19
2931 6588 1.134220 CGGAATAACAGGCTTAGGGCA 60.134 52.381 0.10 0.00 44.01 5.36
2932 6589 2.487265 CGGAATAACAGGCTTAGGGCAT 60.487 50.000 0.10 0.00 44.01 4.40
2938 6595 2.418368 CAGGCTTAGGGCATGTACAA 57.582 50.000 0.00 0.00 46.19 2.41
2939 6596 2.936202 CAGGCTTAGGGCATGTACAAT 58.064 47.619 0.00 0.00 46.19 2.71
2940 6597 2.620115 CAGGCTTAGGGCATGTACAATG 59.380 50.000 0.00 0.12 46.19 2.82
2941 6598 1.956477 GGCTTAGGGCATGTACAATGG 59.044 52.381 0.00 0.00 44.01 3.16
2942 6599 2.654863 GCTTAGGGCATGTACAATGGT 58.345 47.619 0.00 0.00 41.35 3.55
2943 6600 3.023832 GCTTAGGGCATGTACAATGGTT 58.976 45.455 0.00 0.00 41.35 3.67
2944 6601 3.181487 GCTTAGGGCATGTACAATGGTTG 60.181 47.826 0.00 0.00 41.35 3.77
2945 6602 2.897271 AGGGCATGTACAATGGTTGA 57.103 45.000 0.00 0.00 0.00 3.18
2946 6603 3.386932 AGGGCATGTACAATGGTTGAT 57.613 42.857 0.00 0.00 0.00 2.57
2947 6604 4.518278 AGGGCATGTACAATGGTTGATA 57.482 40.909 0.00 0.00 0.00 2.15
2948 6605 4.865905 AGGGCATGTACAATGGTTGATAA 58.134 39.130 0.00 0.00 0.00 1.75
2949 6606 4.889409 AGGGCATGTACAATGGTTGATAAG 59.111 41.667 0.00 0.00 0.00 1.73
2950 6607 4.887071 GGGCATGTACAATGGTTGATAAGA 59.113 41.667 0.00 0.00 0.00 2.10
2951 6608 5.536161 GGGCATGTACAATGGTTGATAAGAT 59.464 40.000 0.00 0.00 0.00 2.40
2952 6609 6.714810 GGGCATGTACAATGGTTGATAAGATA 59.285 38.462 0.00 0.00 0.00 1.98
2953 6610 7.230510 GGGCATGTACAATGGTTGATAAGATAA 59.769 37.037 0.00 0.00 0.00 1.75
2954 6611 8.292448 GGCATGTACAATGGTTGATAAGATAAG 58.708 37.037 0.00 0.00 0.00 1.73
2955 6612 8.840321 GCATGTACAATGGTTGATAAGATAAGT 58.160 33.333 0.00 0.00 0.00 2.24
2991 6648 8.791327 TTCTTGCATGTAATTTAGAGATGACA 57.209 30.769 0.00 0.00 0.00 3.58
2992 6649 8.791327 TCTTGCATGTAATTTAGAGATGACAA 57.209 30.769 0.00 0.00 0.00 3.18
2993 6650 9.230122 TCTTGCATGTAATTTAGAGATGACAAA 57.770 29.630 0.00 0.00 0.00 2.83
2994 6651 9.844790 CTTGCATGTAATTTAGAGATGACAAAA 57.155 29.630 0.00 0.00 0.00 2.44
3019 6676 8.682936 AAAATATGTCTACAATGGGTCATCTC 57.317 34.615 0.00 0.00 0.00 2.75
3020 6677 7.623999 AATATGTCTACAATGGGTCATCTCT 57.376 36.000 0.00 0.00 0.00 3.10
3021 6678 5.965033 ATGTCTACAATGGGTCATCTCTT 57.035 39.130 0.00 0.00 0.00 2.85
3022 6679 8.727100 ATATGTCTACAATGGGTCATCTCTTA 57.273 34.615 0.00 0.00 0.00 2.10
3023 6680 6.471233 TGTCTACAATGGGTCATCTCTTAG 57.529 41.667 0.00 0.00 0.00 2.18
3024 6681 5.958380 TGTCTACAATGGGTCATCTCTTAGT 59.042 40.000 0.00 0.00 0.00 2.24
3025 6682 6.096987 TGTCTACAATGGGTCATCTCTTAGTC 59.903 42.308 0.00 0.00 0.00 2.59
3026 6683 6.322712 GTCTACAATGGGTCATCTCTTAGTCT 59.677 42.308 0.00 0.00 0.00 3.24
3027 6684 6.897966 TCTACAATGGGTCATCTCTTAGTCTT 59.102 38.462 0.00 0.00 0.00 3.01
3028 6685 8.059461 TCTACAATGGGTCATCTCTTAGTCTTA 58.941 37.037 0.00 0.00 0.00 2.10
3029 6686 7.682787 ACAATGGGTCATCTCTTAGTCTTAT 57.317 36.000 0.00 0.00 0.00 1.73
3030 6687 7.731054 ACAATGGGTCATCTCTTAGTCTTATC 58.269 38.462 0.00 0.00 0.00 1.75
3031 6688 7.566879 ACAATGGGTCATCTCTTAGTCTTATCT 59.433 37.037 0.00 0.00 0.00 1.98
3032 6689 8.428063 CAATGGGTCATCTCTTAGTCTTATCTT 58.572 37.037 0.00 0.00 0.00 2.40
3033 6690 7.979786 TGGGTCATCTCTTAGTCTTATCTTT 57.020 36.000 0.00 0.00 0.00 2.52
3034 6691 9.661954 ATGGGTCATCTCTTAGTCTTATCTTTA 57.338 33.333 0.00 0.00 0.00 1.85
3035 6692 9.488762 TGGGTCATCTCTTAGTCTTATCTTTAA 57.511 33.333 0.00 0.00 0.00 1.52
3084 6741 9.920133 TGACAAGATATATTGTGCTAAGAGATC 57.080 33.333 19.91 2.88 43.32 2.75
3085 6742 9.920133 GACAAGATATATTGTGCTAAGAGATCA 57.080 33.333 19.91 0.00 43.32 2.92
3131 6788 8.980481 AAGAGAAGACAAACCTTTTCTTATGA 57.020 30.769 7.40 0.00 42.29 2.15
3132 6789 9.579932 AAGAGAAGACAAACCTTTTCTTATGAT 57.420 29.630 7.40 0.00 42.29 2.45
3133 6790 9.579932 AGAGAAGACAAACCTTTTCTTATGATT 57.420 29.630 0.00 0.00 35.01 2.57
3138 6795 9.579932 AGACAAACCTTTTCTTATGATTTCTCT 57.420 29.630 0.00 0.00 0.00 3.10
3139 6796 9.833182 GACAAACCTTTTCTTATGATTTCTCTC 57.167 33.333 0.00 0.00 0.00 3.20
3140 6797 9.579932 ACAAACCTTTTCTTATGATTTCTCTCT 57.420 29.630 0.00 0.00 0.00 3.10
3142 6799 8.800370 AACCTTTTCTTATGATTTCTCTCTCC 57.200 34.615 0.00 0.00 0.00 3.71
3143 6800 8.156822 ACCTTTTCTTATGATTTCTCTCTCCT 57.843 34.615 0.00 0.00 0.00 3.69
3144 6801 8.610369 ACCTTTTCTTATGATTTCTCTCTCCTT 58.390 33.333 0.00 0.00 0.00 3.36
3145 6802 9.108284 CCTTTTCTTATGATTTCTCTCTCCTTC 57.892 37.037 0.00 0.00 0.00 3.46
3146 6803 9.664332 CTTTTCTTATGATTTCTCTCTCCTTCA 57.336 33.333 0.00 0.00 0.00 3.02
3147 6804 9.442047 TTTTCTTATGATTTCTCTCTCCTTCAC 57.558 33.333 0.00 0.00 0.00 3.18
3148 6805 7.118496 TCTTATGATTTCTCTCTCCTTCACC 57.882 40.000 0.00 0.00 0.00 4.02
3149 6806 6.900186 TCTTATGATTTCTCTCTCCTTCACCT 59.100 38.462 0.00 0.00 0.00 4.00
3150 6807 5.612725 ATGATTTCTCTCTCCTTCACCTC 57.387 43.478 0.00 0.00 0.00 3.85
3151 6808 4.420206 TGATTTCTCTCTCCTTCACCTCA 58.580 43.478 0.00 0.00 0.00 3.86
3152 6809 5.028802 TGATTTCTCTCTCCTTCACCTCAT 58.971 41.667 0.00 0.00 0.00 2.90
3153 6810 5.128499 TGATTTCTCTCTCCTTCACCTCATC 59.872 44.000 0.00 0.00 0.00 2.92
3154 6811 3.746792 TCTCTCTCCTTCACCTCATCA 57.253 47.619 0.00 0.00 0.00 3.07
3155 6812 4.262891 TCTCTCTCCTTCACCTCATCAT 57.737 45.455 0.00 0.00 0.00 2.45
3156 6813 4.618635 TCTCTCTCCTTCACCTCATCATT 58.381 43.478 0.00 0.00 0.00 2.57
3157 6814 5.028802 TCTCTCTCCTTCACCTCATCATTT 58.971 41.667 0.00 0.00 0.00 2.32
3158 6815 6.197903 TCTCTCTCCTTCACCTCATCATTTA 58.802 40.000 0.00 0.00 0.00 1.40
3159 6816 6.843333 TCTCTCTCCTTCACCTCATCATTTAT 59.157 38.462 0.00 0.00 0.00 1.40
3160 6817 7.015098 TCTCTCTCCTTCACCTCATCATTTATC 59.985 40.741 0.00 0.00 0.00 1.75
3161 6818 6.042552 TCTCTCCTTCACCTCATCATTTATCC 59.957 42.308 0.00 0.00 0.00 2.59
3162 6819 5.907662 TCTCCTTCACCTCATCATTTATCCT 59.092 40.000 0.00 0.00 0.00 3.24
3163 6820 7.075797 TCTCCTTCACCTCATCATTTATCCTA 58.924 38.462 0.00 0.00 0.00 2.94
3164 6821 7.015682 TCTCCTTCACCTCATCATTTATCCTAC 59.984 40.741 0.00 0.00 0.00 3.18
3165 6822 5.928839 CCTTCACCTCATCATTTATCCTACG 59.071 44.000 0.00 0.00 0.00 3.51
3166 6823 6.463049 CCTTCACCTCATCATTTATCCTACGT 60.463 42.308 0.00 0.00 0.00 3.57
3167 6824 5.842907 TCACCTCATCATTTATCCTACGTG 58.157 41.667 0.00 0.00 0.00 4.49
3168 6825 5.362717 TCACCTCATCATTTATCCTACGTGT 59.637 40.000 0.00 0.00 0.00 4.49
3169 6826 5.692204 CACCTCATCATTTATCCTACGTGTC 59.308 44.000 0.00 0.00 0.00 3.67
3170 6827 5.362717 ACCTCATCATTTATCCTACGTGTCA 59.637 40.000 0.00 0.00 0.00 3.58
3171 6828 5.692204 CCTCATCATTTATCCTACGTGTCAC 59.308 44.000 0.00 0.00 0.00 3.67
3172 6829 6.461648 CCTCATCATTTATCCTACGTGTCACT 60.462 42.308 0.00 0.00 0.00 3.41
3173 6830 6.504398 TCATCATTTATCCTACGTGTCACTC 58.496 40.000 0.00 0.00 0.00 3.51
3174 6831 5.258456 TCATTTATCCTACGTGTCACTCC 57.742 43.478 0.00 0.00 0.00 3.85
3175 6832 4.954202 TCATTTATCCTACGTGTCACTCCT 59.046 41.667 0.00 0.00 0.00 3.69
3176 6833 6.124340 TCATTTATCCTACGTGTCACTCCTA 58.876 40.000 0.00 0.00 0.00 2.94
3177 6834 6.604396 TCATTTATCCTACGTGTCACTCCTAA 59.396 38.462 0.00 0.00 0.00 2.69
3178 6835 6.446781 TTTATCCTACGTGTCACTCCTAAG 57.553 41.667 0.00 0.00 0.00 2.18
3179 6836 3.708403 TCCTACGTGTCACTCCTAAGA 57.292 47.619 0.00 0.00 0.00 2.10
3180 6837 4.232188 TCCTACGTGTCACTCCTAAGAT 57.768 45.455 0.00 0.00 0.00 2.40
3181 6838 5.363562 TCCTACGTGTCACTCCTAAGATA 57.636 43.478 0.00 0.00 0.00 1.98
3182 6839 5.366460 TCCTACGTGTCACTCCTAAGATAG 58.634 45.833 0.00 0.00 0.00 2.08
3183 6840 4.023878 CCTACGTGTCACTCCTAAGATAGC 60.024 50.000 0.00 0.00 0.00 2.97
3184 6841 3.353557 ACGTGTCACTCCTAAGATAGCA 58.646 45.455 0.65 0.00 0.00 3.49
3185 6842 3.128938 ACGTGTCACTCCTAAGATAGCAC 59.871 47.826 0.65 0.00 0.00 4.40
3186 6843 3.489398 CGTGTCACTCCTAAGATAGCACC 60.489 52.174 0.65 0.00 0.00 5.01
3187 6844 3.447586 GTGTCACTCCTAAGATAGCACCA 59.552 47.826 0.00 0.00 0.00 4.17
3188 6845 4.100189 GTGTCACTCCTAAGATAGCACCAT 59.900 45.833 0.00 0.00 0.00 3.55
3189 6846 4.716784 TGTCACTCCTAAGATAGCACCATT 59.283 41.667 0.00 0.00 0.00 3.16
3190 6847 5.897250 TGTCACTCCTAAGATAGCACCATTA 59.103 40.000 0.00 0.00 0.00 1.90
3191 6848 6.554982 TGTCACTCCTAAGATAGCACCATTAT 59.445 38.462 0.00 0.00 0.00 1.28
3192 6849 7.728532 TGTCACTCCTAAGATAGCACCATTATA 59.271 37.037 0.00 0.00 0.00 0.98
3193 6850 8.030106 GTCACTCCTAAGATAGCACCATTATAC 58.970 40.741 0.00 0.00 0.00 1.47
3194 6851 7.728532 TCACTCCTAAGATAGCACCATTATACA 59.271 37.037 0.00 0.00 0.00 2.29
3195 6852 8.535335 CACTCCTAAGATAGCACCATTATACAT 58.465 37.037 0.00 0.00 0.00 2.29
3196 6853 8.535335 ACTCCTAAGATAGCACCATTATACATG 58.465 37.037 0.00 0.00 0.00 3.21
3197 6854 7.331026 TCCTAAGATAGCACCATTATACATGC 58.669 38.462 0.00 0.00 38.39 4.06
3198 6855 6.540189 CCTAAGATAGCACCATTATACATGCC 59.460 42.308 0.00 0.00 38.92 4.40
3242 6899 8.276252 TGTAGAATTGTCAAATAAGCTTACCC 57.724 34.615 8.70 0.00 0.00 3.69
3345 7005 0.749049 GAAAATCCATGCCTGGGCTC 59.251 55.000 13.05 0.00 43.34 4.70
3350 7010 2.679092 CATGCCTGGGCTCTTCCA 59.321 61.111 13.05 0.00 42.51 3.53
3359 7019 3.973472 TGGGCTCTTCCAGACTCTATA 57.027 47.619 0.00 0.00 36.21 1.31
3369 7029 5.437191 TCCAGACTCTATACTGACTGTGA 57.563 43.478 0.00 0.00 36.38 3.58
3372 7032 5.163703 CCAGACTCTATACTGACTGTGACAC 60.164 48.000 0.00 0.00 36.38 3.67
3412 7076 6.199719 AGCGTTACAGTCTTACAAGTTACAAC 59.800 38.462 0.00 0.00 0.00 3.32
3496 7167 1.672363 CTGTTCAAGCACAACAGCAGA 59.328 47.619 8.88 0.00 43.18 4.26
3497 7168 2.292569 CTGTTCAAGCACAACAGCAGAT 59.707 45.455 8.88 0.00 43.18 2.90
3498 7169 2.291465 TGTTCAAGCACAACAGCAGATC 59.709 45.455 0.00 0.00 36.85 2.75
3499 7170 1.150827 TCAAGCACAACAGCAGATCG 58.849 50.000 0.00 0.00 36.85 3.69
3500 7171 0.167470 CAAGCACAACAGCAGATCGG 59.833 55.000 0.00 0.00 36.85 4.18
3501 7172 1.580845 AAGCACAACAGCAGATCGGC 61.581 55.000 10.10 10.10 36.85 5.54
3502 7173 2.327343 GCACAACAGCAGATCGGCA 61.327 57.895 20.15 0.00 35.83 5.69
3503 7174 1.855213 GCACAACAGCAGATCGGCAA 61.855 55.000 20.15 0.00 35.83 4.52
3504 7175 0.592637 CACAACAGCAGATCGGCAAA 59.407 50.000 20.15 0.00 35.83 3.68
3505 7176 1.001487 CACAACAGCAGATCGGCAAAA 60.001 47.619 20.15 0.00 35.83 2.44
3506 7177 1.888512 ACAACAGCAGATCGGCAAAAT 59.111 42.857 20.15 0.37 35.83 1.82
3507 7178 3.081061 ACAACAGCAGATCGGCAAAATA 58.919 40.909 20.15 0.00 35.83 1.40
3508 7179 3.505680 ACAACAGCAGATCGGCAAAATAA 59.494 39.130 20.15 0.00 35.83 1.40
3509 7180 4.022416 ACAACAGCAGATCGGCAAAATAAA 60.022 37.500 20.15 0.00 35.83 1.40
3510 7181 4.989279 ACAGCAGATCGGCAAAATAAAT 57.011 36.364 20.15 0.00 35.83 1.40
3511 7182 4.675510 ACAGCAGATCGGCAAAATAAATG 58.324 39.130 20.15 8.97 35.83 2.32
3512 7183 3.488310 CAGCAGATCGGCAAAATAAATGC 59.512 43.478 20.15 3.91 43.08 3.56
3513 7184 3.130869 AGCAGATCGGCAAAATAAATGCA 59.869 39.130 20.15 0.00 45.60 3.96
3514 7185 3.243643 GCAGATCGGCAAAATAAATGCAC 59.756 43.478 13.30 0.00 45.60 4.57
3515 7186 4.675510 CAGATCGGCAAAATAAATGCACT 58.324 39.130 0.00 0.00 45.60 4.40
3516 7187 5.104374 CAGATCGGCAAAATAAATGCACTT 58.896 37.500 0.00 0.00 45.60 3.16
3517 7188 5.230726 CAGATCGGCAAAATAAATGCACTTC 59.769 40.000 0.00 0.00 45.60 3.01
3518 7189 4.511617 TCGGCAAAATAAATGCACTTCA 57.488 36.364 0.00 0.00 45.60 3.02
3519 7190 4.484236 TCGGCAAAATAAATGCACTTCAG 58.516 39.130 0.00 0.00 45.60 3.02
3520 7191 3.061161 CGGCAAAATAAATGCACTTCAGC 59.939 43.478 0.00 0.00 45.60 4.26
3531 7202 0.445436 CACTTCAGCAGATCGGCAAC 59.555 55.000 20.15 0.00 35.83 4.17
3587 7274 1.270550 CCAAAAGAAGCCGCTGAACAT 59.729 47.619 0.00 0.00 0.00 2.71
3694 7387 5.768980 AGAATCCAATGAGTTCTCCAGAA 57.231 39.130 0.00 0.00 0.00 3.02
3696 7389 3.340814 TCCAATGAGTTCTCCAGAAGC 57.659 47.619 0.00 0.00 34.27 3.86
3699 7392 3.368427 CCAATGAGTTCTCCAGAAGCGTA 60.368 47.826 0.00 0.00 34.27 4.42
3756 7549 1.379977 TCTAGGTGAGACTGGGCCG 60.380 63.158 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.077359 AGGATTCGGAAGACAAAAGCTG 58.923 45.455 0.00 0.00 41.84 4.24
1 2 3.425162 AGGATTCGGAAGACAAAAGCT 57.575 42.857 0.00 0.00 41.84 3.74
2 3 4.505313 AAAGGATTCGGAAGACAAAAGC 57.495 40.909 0.00 0.00 41.84 3.51
22 23 4.329462 ACTATTTTTGCGGGCTGAAAAA 57.671 36.364 8.17 8.17 35.95 1.94
23 24 4.303282 GAACTATTTTTGCGGGCTGAAAA 58.697 39.130 0.00 0.00 0.00 2.29
24 25 3.305744 GGAACTATTTTTGCGGGCTGAAA 60.306 43.478 0.00 0.00 0.00 2.69
25 26 2.230266 GGAACTATTTTTGCGGGCTGAA 59.770 45.455 0.00 0.00 0.00 3.02
26 27 1.816224 GGAACTATTTTTGCGGGCTGA 59.184 47.619 0.00 0.00 0.00 4.26
27 28 1.135112 GGGAACTATTTTTGCGGGCTG 60.135 52.381 0.00 0.00 0.00 4.85
28 29 1.182667 GGGAACTATTTTTGCGGGCT 58.817 50.000 0.00 0.00 0.00 5.19
29 30 0.892063 TGGGAACTATTTTTGCGGGC 59.108 50.000 0.00 0.00 0.00 6.13
30 31 2.163613 GAGTGGGAACTATTTTTGCGGG 59.836 50.000 0.00 0.00 0.00 6.13
31 32 2.817258 TGAGTGGGAACTATTTTTGCGG 59.183 45.455 0.00 0.00 0.00 5.69
32 33 3.365969 GGTGAGTGGGAACTATTTTTGCG 60.366 47.826 0.00 0.00 0.00 4.85
33 34 3.365969 CGGTGAGTGGGAACTATTTTTGC 60.366 47.826 0.00 0.00 0.00 3.68
34 35 3.818773 ACGGTGAGTGGGAACTATTTTTG 59.181 43.478 0.00 0.00 0.00 2.44
35 36 4.094830 ACGGTGAGTGGGAACTATTTTT 57.905 40.909 0.00 0.00 0.00 1.94
36 37 3.782656 ACGGTGAGTGGGAACTATTTT 57.217 42.857 0.00 0.00 0.00 1.82
37 38 3.408634 CAACGGTGAGTGGGAACTATTT 58.591 45.455 0.00 0.00 0.00 1.40
38 39 2.874457 GCAACGGTGAGTGGGAACTATT 60.874 50.000 3.55 0.00 0.00 1.73
39 40 1.338769 GCAACGGTGAGTGGGAACTAT 60.339 52.381 3.55 0.00 0.00 2.12
59 60 1.068121 AGGTGAAAAGTGAGAGGGGG 58.932 55.000 0.00 0.00 0.00 5.40
76 77 0.396811 AAGACAGGGACGAACCAAGG 59.603 55.000 0.00 0.00 41.20 3.61
78 79 3.307199 GGATAAAGACAGGGACGAACCAA 60.307 47.826 0.00 0.00 41.20 3.67
183 184 8.081633 TGGCTTAGTATATTATTGTGCAATTGC 58.918 33.333 23.69 23.69 42.50 3.56
231 232 5.175859 GGATCTCAGTCCGTAACATTGAAA 58.824 41.667 0.00 0.00 0.00 2.69
246 247 7.288210 CACCAAGTGAAGTTACTGGATCTCAG 61.288 46.154 9.01 9.01 41.59 3.35
247 248 4.593206 ACCAAGTGAAGTTACTGGATCTCA 59.407 41.667 0.00 0.00 0.00 3.27
248 249 4.932200 CACCAAGTGAAGTTACTGGATCTC 59.068 45.833 0.00 0.00 35.23 2.75
250 251 4.894784 TCACCAAGTGAAGTTACTGGATC 58.105 43.478 0.00 0.00 39.78 3.36
252 253 4.764050 TTCACCAAGTGAAGTTACTGGA 57.236 40.909 6.08 0.00 45.88 3.86
263 264 1.268032 GCAACGTGACTTCACCAAGTG 60.268 52.381 3.77 0.00 43.37 3.16
264 265 1.014352 GCAACGTGACTTCACCAAGT 58.986 50.000 3.77 0.00 46.21 3.16
265 266 1.013596 TGCAACGTGACTTCACCAAG 58.986 50.000 3.77 0.00 43.66 3.61
266 267 1.131504 GTTGCAACGTGACTTCACCAA 59.868 47.619 14.90 0.06 43.66 3.67
268 269 1.014352 AGTTGCAACGTGACTTCACC 58.986 50.000 23.21 0.00 43.66 4.02
269 270 2.825086 AAGTTGCAACGTGACTTCAC 57.175 45.000 23.21 0.00 43.15 3.18
270 271 3.311322 CCTAAAGTTGCAACGTGACTTCA 59.689 43.478 23.21 0.00 32.79 3.02
271 272 3.848554 GCCTAAAGTTGCAACGTGACTTC 60.849 47.826 23.21 8.18 32.79 3.01
272 273 2.032924 GCCTAAAGTTGCAACGTGACTT 59.967 45.455 23.21 9.39 35.27 3.01
273 274 1.602377 GCCTAAAGTTGCAACGTGACT 59.398 47.619 23.21 8.55 0.00 3.41
274 275 1.602377 AGCCTAAAGTTGCAACGTGAC 59.398 47.619 23.21 12.14 0.00 3.67
275 276 1.871039 GAGCCTAAAGTTGCAACGTGA 59.129 47.619 23.21 13.04 0.00 4.35
276 277 1.873591 AGAGCCTAAAGTTGCAACGTG 59.126 47.619 23.21 13.95 0.00 4.49
278 279 2.548057 TGAAGAGCCTAAAGTTGCAACG 59.452 45.455 23.21 10.26 0.00 4.10
280 281 4.655963 AGATGAAGAGCCTAAAGTTGCAA 58.344 39.130 0.00 0.00 0.00 4.08
281 282 4.256920 GAGATGAAGAGCCTAAAGTTGCA 58.743 43.478 0.00 0.00 0.00 4.08
282 283 3.625313 GGAGATGAAGAGCCTAAAGTTGC 59.375 47.826 0.00 0.00 0.00 4.17
283 284 4.836825 TGGAGATGAAGAGCCTAAAGTTG 58.163 43.478 0.00 0.00 0.00 3.16
284 285 5.397334 GGATGGAGATGAAGAGCCTAAAGTT 60.397 44.000 0.00 0.00 0.00 2.66
285 286 4.102367 GGATGGAGATGAAGAGCCTAAAGT 59.898 45.833 0.00 0.00 0.00 2.66
287 288 4.040047 TGGATGGAGATGAAGAGCCTAAA 58.960 43.478 0.00 0.00 0.00 1.85
289 290 3.334910 TGGATGGAGATGAAGAGCCTA 57.665 47.619 0.00 0.00 0.00 3.93
290 291 2.187239 TGGATGGAGATGAAGAGCCT 57.813 50.000 0.00 0.00 0.00 4.58
291 292 3.287867 TTTGGATGGAGATGAAGAGCC 57.712 47.619 0.00 0.00 0.00 4.70
293 294 7.607223 GGATCTATTTTGGATGGAGATGAAGAG 59.393 40.741 0.00 0.00 0.00 2.85
294 295 7.072834 TGGATCTATTTTGGATGGAGATGAAGA 59.927 37.037 0.00 0.00 0.00 2.87
295 296 7.229308 TGGATCTATTTTGGATGGAGATGAAG 58.771 38.462 0.00 0.00 0.00 3.02
297 298 6.768641 TGGATCTATTTTGGATGGAGATGA 57.231 37.500 0.00 0.00 0.00 2.92
298 299 6.072838 CGTTGGATCTATTTTGGATGGAGATG 60.073 42.308 0.00 0.00 0.00 2.90
300 301 5.368145 CGTTGGATCTATTTTGGATGGAGA 58.632 41.667 0.00 0.00 0.00 3.71
301 302 4.516698 CCGTTGGATCTATTTTGGATGGAG 59.483 45.833 0.00 0.00 0.00 3.86
302 303 4.080015 ACCGTTGGATCTATTTTGGATGGA 60.080 41.667 0.00 0.00 0.00 3.41
303 304 4.207165 ACCGTTGGATCTATTTTGGATGG 58.793 43.478 0.00 0.00 0.00 3.51
304 305 4.275936 GGACCGTTGGATCTATTTTGGATG 59.724 45.833 0.00 0.00 0.00 3.51
306 307 3.264706 TGGACCGTTGGATCTATTTTGGA 59.735 43.478 0.00 0.00 0.00 3.53
307 308 3.616219 TGGACCGTTGGATCTATTTTGG 58.384 45.455 0.00 0.00 0.00 3.28
308 309 6.710295 TGATATGGACCGTTGGATCTATTTTG 59.290 38.462 0.00 0.00 0.00 2.44
310 311 6.433847 TGATATGGACCGTTGGATCTATTT 57.566 37.500 0.00 0.00 0.00 1.40
311 312 6.409704 CATGATATGGACCGTTGGATCTATT 58.590 40.000 0.00 0.00 0.00 1.73
313 314 4.322725 GCATGATATGGACCGTTGGATCTA 60.323 45.833 0.00 0.00 0.00 1.98
316 317 2.106338 TGCATGATATGGACCGTTGGAT 59.894 45.455 0.00 0.00 0.00 3.41
317 318 1.488393 TGCATGATATGGACCGTTGGA 59.512 47.619 0.00 0.00 0.00 3.53
318 319 1.965935 TGCATGATATGGACCGTTGG 58.034 50.000 0.00 0.00 0.00 3.77
319 320 3.243168 CCTTTGCATGATATGGACCGTTG 60.243 47.826 0.00 0.00 0.00 4.10
322 376 1.267806 GCCTTTGCATGATATGGACCG 59.732 52.381 0.00 0.00 37.47 4.79
344 398 1.780503 ACTGGCCAAGTGAGCTTTTT 58.219 45.000 7.01 0.00 37.88 1.94
350 404 0.746063 TGCAAAACTGGCCAAGTGAG 59.254 50.000 7.01 0.00 39.81 3.51
351 405 0.746063 CTGCAAAACTGGCCAAGTGA 59.254 50.000 7.01 0.00 39.81 3.41
352 406 0.877213 GCTGCAAAACTGGCCAAGTG 60.877 55.000 7.01 3.42 39.81 3.16
354 408 1.301165 GGCTGCAAAACTGGCCAAG 60.301 57.895 7.01 3.48 43.59 3.61
358 412 1.595109 GTTGGGCTGCAAAACTGGC 60.595 57.895 0.50 0.00 41.43 4.85
360 414 0.877213 GCTGTTGGGCTGCAAAACTG 60.877 55.000 14.95 14.86 41.05 3.16
362 416 1.950630 CGCTGTTGGGCTGCAAAAC 60.951 57.895 0.50 5.86 41.39 2.43
363 417 2.124060 TCGCTGTTGGGCTGCAAAA 61.124 52.632 0.50 0.00 41.39 2.44
364 418 2.518112 TCGCTGTTGGGCTGCAAA 60.518 55.556 0.50 0.00 41.39 3.68
365 419 3.286751 GTCGCTGTTGGGCTGCAA 61.287 61.111 0.50 0.00 41.39 4.08
366 420 4.560743 TGTCGCTGTTGGGCTGCA 62.561 61.111 0.50 0.00 41.39 4.41
367 421 3.730761 CTGTCGCTGTTGGGCTGC 61.731 66.667 0.00 0.00 38.48 5.25
368 422 1.597854 TTCTGTCGCTGTTGGGCTG 60.598 57.895 0.00 0.00 0.00 4.85
369 423 1.598130 GTTCTGTCGCTGTTGGGCT 60.598 57.895 0.00 0.00 0.00 5.19
370 424 1.891919 TGTTCTGTCGCTGTTGGGC 60.892 57.895 0.00 0.00 0.00 5.36
371 425 0.532862 AGTGTTCTGTCGCTGTTGGG 60.533 55.000 0.00 0.00 0.00 4.12
372 426 0.583438 CAGTGTTCTGTCGCTGTTGG 59.417 55.000 0.00 0.00 39.97 3.77
374 428 0.179073 AGCAGTGTTCTGTCGCTGTT 60.179 50.000 13.77 8.11 44.65 3.16
375 429 0.598680 GAGCAGTGTTCTGTCGCTGT 60.599 55.000 0.00 5.30 44.65 4.40
377 431 1.372251 CGAGCAGTGTTCTGTCGCT 60.372 57.895 5.39 0.00 43.05 4.93
378 432 0.386858 TACGAGCAGTGTTCTGTCGC 60.387 55.000 5.39 0.00 42.67 5.19
379 433 1.607713 CTACGAGCAGTGTTCTGTCG 58.392 55.000 5.39 13.76 43.51 4.35
381 435 1.617322 TCCTACGAGCAGTGTTCTGT 58.383 50.000 5.39 7.40 43.05 3.41
383 437 2.826128 TGAATCCTACGAGCAGTGTTCT 59.174 45.455 5.39 0.00 0.00 3.01
384 438 3.182967 CTGAATCCTACGAGCAGTGTTC 58.817 50.000 0.00 0.00 0.00 3.18
385 439 2.563179 ACTGAATCCTACGAGCAGTGTT 59.437 45.455 0.00 0.00 36.66 3.32
386 440 2.171840 ACTGAATCCTACGAGCAGTGT 58.828 47.619 0.00 0.00 36.66 3.55
388 442 5.401531 TTTAACTGAATCCTACGAGCAGT 57.598 39.130 0.00 0.00 38.51 4.40
389 443 5.637810 TGTTTTAACTGAATCCTACGAGCAG 59.362 40.000 0.00 0.00 33.05 4.24
391 445 5.867716 TCTGTTTTAACTGAATCCTACGAGC 59.132 40.000 0.00 0.00 34.54 5.03
392 446 8.480643 AATCTGTTTTAACTGAATCCTACGAG 57.519 34.615 6.34 0.00 39.72 4.18
393 447 9.362539 GTAATCTGTTTTAACTGAATCCTACGA 57.637 33.333 6.34 0.00 39.72 3.43
398 452 7.702348 GGCATGTAATCTGTTTTAACTGAATCC 59.298 37.037 6.34 0.00 39.72 3.01
401 455 7.517614 TGGCATGTAATCTGTTTTAACTGAA 57.482 32.000 6.34 0.00 39.72 3.02
402 456 7.230510 AGTTGGCATGTAATCTGTTTTAACTGA 59.769 33.333 4.94 4.94 40.41 3.41
405 459 9.503427 GATAGTTGGCATGTAATCTGTTTTAAC 57.497 33.333 0.00 0.00 0.00 2.01
406 460 9.461312 AGATAGTTGGCATGTAATCTGTTTTAA 57.539 29.630 0.00 0.00 0.00 1.52
408 462 7.944729 AGATAGTTGGCATGTAATCTGTTTT 57.055 32.000 0.00 0.00 0.00 2.43
409 463 9.632638 ATTAGATAGTTGGCATGTAATCTGTTT 57.367 29.630 10.59 0.00 0.00 2.83
411 465 8.654997 AGATTAGATAGTTGGCATGTAATCTGT 58.345 33.333 14.07 4.37 42.67 3.41
413 467 9.717942 GAAGATTAGATAGTTGGCATGTAATCT 57.282 33.333 10.69 10.69 44.53 2.40
414 468 9.494271 TGAAGATTAGATAGTTGGCATGTAATC 57.506 33.333 7.33 7.33 38.21 1.75
416 470 9.851686 AATGAAGATTAGATAGTTGGCATGTAA 57.148 29.630 0.00 0.00 0.00 2.41
417 471 9.851686 AAATGAAGATTAGATAGTTGGCATGTA 57.148 29.630 0.00 0.00 0.00 2.29
418 472 8.757982 AAATGAAGATTAGATAGTTGGCATGT 57.242 30.769 0.00 0.00 0.00 3.21
419 473 9.064706 AGAAATGAAGATTAGATAGTTGGCATG 57.935 33.333 0.00 0.00 0.00 4.06
420 474 9.064706 CAGAAATGAAGATTAGATAGTTGGCAT 57.935 33.333 0.00 0.00 0.00 4.40
421 475 8.267183 TCAGAAATGAAGATTAGATAGTTGGCA 58.733 33.333 0.00 0.00 0.00 4.92
422 476 8.668510 TCAGAAATGAAGATTAGATAGTTGGC 57.331 34.615 0.00 0.00 0.00 4.52
450 504 9.376075 CGAACAATGCTCCAAGAAGATATATAT 57.624 33.333 0.00 0.00 0.00 0.86
451 505 7.819415 CCGAACAATGCTCCAAGAAGATATATA 59.181 37.037 0.00 0.00 0.00 0.86
454 508 4.818546 CCGAACAATGCTCCAAGAAGATAT 59.181 41.667 0.00 0.00 0.00 1.63
456 510 3.012518 CCGAACAATGCTCCAAGAAGAT 58.987 45.455 0.00 0.00 0.00 2.40
457 511 2.224523 ACCGAACAATGCTCCAAGAAGA 60.225 45.455 0.00 0.00 0.00 2.87
458 512 2.095567 CACCGAACAATGCTCCAAGAAG 60.096 50.000 0.00 0.00 0.00 2.85
459 513 1.879380 CACCGAACAATGCTCCAAGAA 59.121 47.619 0.00 0.00 0.00 2.52
460 514 1.522668 CACCGAACAATGCTCCAAGA 58.477 50.000 0.00 0.00 0.00 3.02
461 515 0.109597 GCACCGAACAATGCTCCAAG 60.110 55.000 0.00 0.00 38.84 3.61
462 516 0.821301 TGCACCGAACAATGCTCCAA 60.821 50.000 0.00 0.00 42.55 3.53
464 518 1.503542 CTGCACCGAACAATGCTCC 59.496 57.895 0.00 0.00 42.55 4.70
465 519 1.237285 ACCTGCACCGAACAATGCTC 61.237 55.000 0.00 0.00 42.55 4.26
466 520 1.228245 ACCTGCACCGAACAATGCT 60.228 52.632 0.00 0.00 42.55 3.79
467 521 1.081242 CACCTGCACCGAACAATGC 60.081 57.895 0.00 0.00 42.40 3.56
468 522 1.135603 CATCACCTGCACCGAACAATG 60.136 52.381 0.00 0.00 0.00 2.82
469 523 1.167851 CATCACCTGCACCGAACAAT 58.832 50.000 0.00 0.00 0.00 2.71
470 524 0.179032 ACATCACCTGCACCGAACAA 60.179 50.000 0.00 0.00 0.00 2.83
471 525 0.682292 TACATCACCTGCACCGAACA 59.318 50.000 0.00 0.00 0.00 3.18
472 526 1.803334 TTACATCACCTGCACCGAAC 58.197 50.000 0.00 0.00 0.00 3.95
519 1619 3.358111 TTTACATCCAAGGCATCGGAA 57.642 42.857 0.00 0.00 34.22 4.30
525 1625 5.475564 GGAAGTAACTTTTACATCCAAGGCA 59.524 40.000 13.10 0.00 35.89 4.75
565 1665 9.495572 CACTTGTTAAAATCTCTAGAAAGACCT 57.504 33.333 0.00 0.00 0.00 3.85
566 1666 9.490379 TCACTTGTTAAAATCTCTAGAAAGACC 57.510 33.333 0.00 0.00 0.00 3.85
588 1688 9.672673 ACTCATTTTGCTTTGTATATAGTCACT 57.327 29.630 0.00 0.00 0.00 3.41
589 1689 9.708222 CACTCATTTTGCTTTGTATATAGTCAC 57.292 33.333 0.00 0.00 0.00 3.67
590 1690 9.665719 TCACTCATTTTGCTTTGTATATAGTCA 57.334 29.630 0.00 0.00 0.00 3.41
593 1693 9.722056 GGTTCACTCATTTTGCTTTGTATATAG 57.278 33.333 0.00 0.00 0.00 1.31
594 1694 9.461312 AGGTTCACTCATTTTGCTTTGTATATA 57.539 29.630 0.00 0.00 0.00 0.86
595 1695 8.353423 AGGTTCACTCATTTTGCTTTGTATAT 57.647 30.769 0.00 0.00 0.00 0.86
596 1696 7.759489 AGGTTCACTCATTTTGCTTTGTATA 57.241 32.000 0.00 0.00 0.00 1.47
597 1697 6.655078 AGGTTCACTCATTTTGCTTTGTAT 57.345 33.333 0.00 0.00 0.00 2.29
598 1698 7.759489 ATAGGTTCACTCATTTTGCTTTGTA 57.241 32.000 0.00 0.00 0.00 2.41
599 1699 6.655078 ATAGGTTCACTCATTTTGCTTTGT 57.345 33.333 0.00 0.00 0.00 2.83
600 1700 7.820648 AGTATAGGTTCACTCATTTTGCTTTG 58.179 34.615 0.00 0.00 0.00 2.77
601 1701 7.885399 AGAGTATAGGTTCACTCATTTTGCTTT 59.115 33.333 4.70 0.00 42.99 3.51
602 1702 7.398024 AGAGTATAGGTTCACTCATTTTGCTT 58.602 34.615 4.70 0.00 42.99 3.91
603 1703 6.951971 AGAGTATAGGTTCACTCATTTTGCT 58.048 36.000 4.70 0.00 42.99 3.91
604 1704 8.718102 TTAGAGTATAGGTTCACTCATTTTGC 57.282 34.615 4.70 0.00 42.99 3.68
641 1741 8.941995 ACTACCACATACAGATGTAGATGTAT 57.058 34.615 0.00 0.00 44.82 2.29
642 1742 7.447545 GGACTACCACATACAGATGTAGATGTA 59.552 40.741 0.00 0.00 44.82 2.29
643 1743 6.265649 GGACTACCACATACAGATGTAGATGT 59.734 42.308 0.00 0.00 44.82 3.06
644 1744 6.265422 TGGACTACCACATACAGATGTAGATG 59.735 42.308 0.00 0.00 44.82 2.90
645 1745 6.373759 TGGACTACCACATACAGATGTAGAT 58.626 40.000 0.00 0.00 44.82 1.98
646 1746 5.762279 TGGACTACCACATACAGATGTAGA 58.238 41.667 0.00 0.00 44.82 2.59
664 1764 9.579932 AGTCTTTTTAGAGATTTCAAATGGACT 57.420 29.630 0.00 0.00 0.00 3.85
685 1785 9.907229 CTTCCCCTGTTCTTAAATATAAGTCTT 57.093 33.333 0.00 0.00 39.65 3.01
686 1786 9.059023 ACTTCCCCTGTTCTTAAATATAAGTCT 57.941 33.333 0.00 0.00 39.65 3.24
699 1799 9.275572 TGTATAAATAACTACTTCCCCTGTTCT 57.724 33.333 0.00 0.00 0.00 3.01
702 1802 9.448587 AGATGTATAAATAACTACTTCCCCTGT 57.551 33.333 0.00 0.00 0.00 4.00
821 1921 5.504173 GCTGACGTTAGAGCAACTTCTTTTT 60.504 40.000 12.13 0.00 36.59 1.94
822 1922 4.024809 GCTGACGTTAGAGCAACTTCTTTT 60.025 41.667 12.13 0.00 36.59 2.27
823 1923 3.495001 GCTGACGTTAGAGCAACTTCTTT 59.505 43.478 12.13 0.00 36.59 2.52
824 1924 3.060602 GCTGACGTTAGAGCAACTTCTT 58.939 45.455 12.13 0.00 36.59 2.52
825 1925 2.297597 AGCTGACGTTAGAGCAACTTCT 59.702 45.455 12.13 0.00 36.59 2.85
888 3966 0.108186 TATTCTCTGGCGTGCTGGTG 60.108 55.000 0.00 0.00 0.00 4.17
893 3971 2.526120 GGCGTATTCTCTGGCGTGC 61.526 63.158 0.00 0.00 0.00 5.34
945 4038 1.291132 GTTATCTCTGCCTTCCGTGC 58.709 55.000 0.00 0.00 0.00 5.34
966 4059 2.794631 CGGAGTTCAGTTTGTTTGGTGC 60.795 50.000 0.00 0.00 0.00 5.01
969 4062 3.625764 TCTTCGGAGTTCAGTTTGTTTGG 59.374 43.478 0.00 0.00 0.00 3.28
975 4068 3.788937 TCGTTTCTTCGGAGTTCAGTTT 58.211 40.909 0.00 0.00 0.00 2.66
976 4069 3.447918 TCGTTTCTTCGGAGTTCAGTT 57.552 42.857 0.00 0.00 0.00 3.16
977 4070 3.381949 CTTCGTTTCTTCGGAGTTCAGT 58.618 45.455 0.00 0.00 32.42 3.41
978 4071 2.155924 GCTTCGTTTCTTCGGAGTTCAG 59.844 50.000 0.00 0.00 38.54 3.02
979 4072 2.132762 GCTTCGTTTCTTCGGAGTTCA 58.867 47.619 0.00 0.00 38.54 3.18
980 4073 2.132762 TGCTTCGTTTCTTCGGAGTTC 58.867 47.619 0.00 0.00 38.54 3.01
981 4074 2.234300 TGCTTCGTTTCTTCGGAGTT 57.766 45.000 0.00 0.00 38.54 3.01
982 4075 2.069273 CATGCTTCGTTTCTTCGGAGT 58.931 47.619 0.00 0.00 38.54 3.85
983 4076 1.394917 CCATGCTTCGTTTCTTCGGAG 59.605 52.381 0.00 0.00 39.21 4.63
1062 4155 3.839353 GATGCCCGAGCCCATCTGG 62.839 68.421 0.00 0.00 38.69 3.86
1238 4331 1.956170 CAGCGTCACTTTGCGAGGT 60.956 57.895 0.00 0.00 35.87 3.85
1379 4706 2.921634 TCTTGATGTCTTCGGACTCG 57.078 50.000 0.00 0.00 44.70 4.18
1392 4719 3.070018 CCACGAACAGCTTCTTCTTGAT 58.930 45.455 8.33 0.00 0.00 2.57
1442 4769 2.879756 GCTGGTGTTGGAGGCAAGAATA 60.880 50.000 0.00 0.00 0.00 1.75
1525 4852 1.514553 CGACTGCTGAGATGAGCCA 59.485 57.895 0.00 0.00 38.28 4.75
1530 4857 2.200067 CTAAAGGCGACTGCTGAGATG 58.800 52.381 0.00 0.00 42.68 2.90
1545 4872 3.181510 GCAATCAACCGGTGTAGCTAAAG 60.182 47.826 8.52 0.00 0.00 1.85
1558 4885 4.525912 AATTCTGGACAAGCAATCAACC 57.474 40.909 0.00 0.00 0.00 3.77
1563 4890 7.067494 GTCCTATGTAAATTCTGGACAAGCAAT 59.933 37.037 0.00 0.00 42.32 3.56
1693 5186 6.425114 GGTTGTAGAGTATGCAATCCTATGTG 59.575 42.308 0.00 0.00 35.84 3.21
1718 5211 2.754472 TGTTCGGACACATGTTCTGAG 58.246 47.619 14.87 0.42 0.00 3.35
1729 5222 0.031585 CCTTGAGACGTGTTCGGACA 59.968 55.000 0.00 0.00 41.85 4.02
1730 5223 1.282930 GCCTTGAGACGTGTTCGGAC 61.283 60.000 0.00 0.00 41.85 4.79
1731 5224 1.006571 GCCTTGAGACGTGTTCGGA 60.007 57.895 0.00 0.00 41.85 4.55
1732 5225 1.300620 TGCCTTGAGACGTGTTCGG 60.301 57.895 0.00 0.00 41.85 4.30
1733 5226 0.597637 AGTGCCTTGAGACGTGTTCG 60.598 55.000 0.00 0.00 43.34 3.95
1734 5227 1.140816 GAGTGCCTTGAGACGTGTTC 58.859 55.000 0.00 0.00 0.00 3.18
1735 5228 0.249911 GGAGTGCCTTGAGACGTGTT 60.250 55.000 0.00 0.00 0.00 3.32
1736 5229 1.115930 AGGAGTGCCTTGAGACGTGT 61.116 55.000 0.00 0.00 43.90 4.49
1737 5230 0.668706 CAGGAGTGCCTTGAGACGTG 60.669 60.000 0.00 0.00 43.90 4.49
1738 5231 1.115930 ACAGGAGTGCCTTGAGACGT 61.116 55.000 0.00 0.00 43.90 4.34
1739 5232 0.888619 TACAGGAGTGCCTTGAGACG 59.111 55.000 0.00 0.00 43.90 4.18
1973 5480 1.959282 CAGGGCAATAGGATGCTTTCC 59.041 52.381 0.00 0.00 45.68 3.13
1983 5490 1.141657 TGAGCTTAGGCAGGGCAATAG 59.858 52.381 0.00 0.00 41.70 1.73
2006 5513 6.604795 ACAAGATCACATTTAAGGCTATGCTT 59.395 34.615 0.00 0.00 0.00 3.91
2007 5514 6.125029 ACAAGATCACATTTAAGGCTATGCT 58.875 36.000 0.00 0.00 0.00 3.79
2008 5515 6.382869 ACAAGATCACATTTAAGGCTATGC 57.617 37.500 0.00 0.00 0.00 3.14
2107 5644 8.980481 AATCCATTAACAATAGGAAGTGGTAG 57.020 34.615 0.00 0.00 33.17 3.18
2154 5691 7.183460 AGTTTACCTGAACTCCAGAGTATAGT 58.817 38.462 0.00 0.14 45.78 2.12
2205 5742 9.569122 TCTTTACAATGAAAAAGCTAGGTTACT 57.431 29.630 7.76 0.00 33.61 2.24
2303 5840 3.725634 AGGTAGCATGGTAGTTCTCCTT 58.274 45.455 4.51 0.00 0.00 3.36
2304 5841 3.406512 AGGTAGCATGGTAGTTCTCCT 57.593 47.619 4.51 5.07 0.00 3.69
2305 5842 4.216708 AGTAGGTAGCATGGTAGTTCTCC 58.783 47.826 4.51 2.63 0.00 3.71
2565 6103 0.323451 CCTCTTTGGTTGCTACCCCC 60.323 60.000 15.00 0.00 44.35 5.40
2592 6130 0.975556 TGCCGAGCTTCATCCCTGTA 60.976 55.000 0.00 0.00 0.00 2.74
2613 6151 1.577242 AGAGGGCCCATTGGATGATTT 59.423 47.619 27.56 0.00 0.00 2.17
2784 6322 3.965694 AGAGCTTCTCCCGTAAGAGTAA 58.034 45.455 0.00 0.00 43.02 2.24
2811 6349 5.063204 CACAGAGATGACTTGGGTTTAACA 58.937 41.667 0.00 0.00 0.00 2.41
2847 6392 1.536766 CATTTCTTCGCTCAACAGCCA 59.463 47.619 0.00 0.00 43.56 4.75
2859 6404 5.637810 TCGTCATACACAACCTCATTTCTTC 59.362 40.000 0.00 0.00 0.00 2.87
2869 6414 2.482721 CCACCTTTCGTCATACACAACC 59.517 50.000 0.00 0.00 0.00 3.77
2904 6560 2.292267 AGCCTGTTATTCCGATGCTTG 58.708 47.619 0.00 0.00 0.00 4.01
2923 6580 4.269183 TCAACCATTGTACATGCCCTAAG 58.731 43.478 0.00 0.00 0.00 2.18
2924 6581 4.308526 TCAACCATTGTACATGCCCTAA 57.691 40.909 0.00 0.00 0.00 2.69
2925 6582 4.518278 ATCAACCATTGTACATGCCCTA 57.482 40.909 0.00 0.00 0.00 3.53
2926 6583 2.897271 TCAACCATTGTACATGCCCT 57.103 45.000 0.00 0.00 0.00 5.19
2927 6584 4.887071 TCTTATCAACCATTGTACATGCCC 59.113 41.667 0.00 0.00 0.00 5.36
2928 6585 6.639632 ATCTTATCAACCATTGTACATGCC 57.360 37.500 0.00 0.00 0.00 4.40
2929 6586 8.840321 ACTTATCTTATCAACCATTGTACATGC 58.160 33.333 0.00 0.00 0.00 4.06
2965 6622 9.399797 TGTCATCTCTAAATTACATGCAAGAAT 57.600 29.630 0.00 0.00 0.00 2.40
2966 6623 8.791327 TGTCATCTCTAAATTACATGCAAGAA 57.209 30.769 0.00 0.00 0.00 2.52
2967 6624 8.791327 TTGTCATCTCTAAATTACATGCAAGA 57.209 30.769 0.00 0.00 0.00 3.02
2968 6625 9.844790 TTTTGTCATCTCTAAATTACATGCAAG 57.155 29.630 0.00 0.00 0.00 4.01
2993 6650 9.125026 GAGATGACCCATTGTAGACATATTTTT 57.875 33.333 0.00 0.00 0.00 1.94
2994 6651 8.497745 AGAGATGACCCATTGTAGACATATTTT 58.502 33.333 0.00 0.00 0.00 1.82
2995 6652 8.038862 AGAGATGACCCATTGTAGACATATTT 57.961 34.615 0.00 0.00 0.00 1.40
2996 6653 7.623999 AGAGATGACCCATTGTAGACATATT 57.376 36.000 0.00 0.00 0.00 1.28
2997 6654 7.623999 AAGAGATGACCCATTGTAGACATAT 57.376 36.000 0.00 0.00 0.00 1.78
2998 6655 7.785028 ACTAAGAGATGACCCATTGTAGACATA 59.215 37.037 0.00 0.00 0.00 2.29
2999 6656 5.965033 AAGAGATGACCCATTGTAGACAT 57.035 39.130 0.00 0.00 0.00 3.06
3000 6657 5.958380 ACTAAGAGATGACCCATTGTAGACA 59.042 40.000 0.00 0.00 0.00 3.41
3001 6658 6.322712 AGACTAAGAGATGACCCATTGTAGAC 59.677 42.308 0.00 0.00 0.00 2.59
3002 6659 6.436027 AGACTAAGAGATGACCCATTGTAGA 58.564 40.000 0.00 0.00 0.00 2.59
3003 6660 6.723298 AGACTAAGAGATGACCCATTGTAG 57.277 41.667 0.00 0.00 0.00 2.74
3004 6661 8.783660 ATAAGACTAAGAGATGACCCATTGTA 57.216 34.615 0.00 0.00 0.00 2.41
3005 6662 7.566879 AGATAAGACTAAGAGATGACCCATTGT 59.433 37.037 0.00 0.00 0.00 2.71
3006 6663 7.961351 AGATAAGACTAAGAGATGACCCATTG 58.039 38.462 0.00 0.00 0.00 2.82
3007 6664 8.560124 AAGATAAGACTAAGAGATGACCCATT 57.440 34.615 0.00 0.00 0.00 3.16
3008 6665 8.560124 AAAGATAAGACTAAGAGATGACCCAT 57.440 34.615 0.00 0.00 0.00 4.00
3009 6666 7.979786 AAAGATAAGACTAAGAGATGACCCA 57.020 36.000 0.00 0.00 0.00 4.51
3058 6715 9.920133 GATCTCTTAGCACAATATATCTTGTCA 57.080 33.333 3.63 0.00 37.25 3.58
3059 6716 9.920133 TGATCTCTTAGCACAATATATCTTGTC 57.080 33.333 3.63 0.89 37.25 3.18
3106 6763 8.980481 TCATAAGAAAAGGTTTGTCTTCTCTT 57.020 30.769 0.00 0.00 37.66 2.85
3107 6764 9.579932 AATCATAAGAAAAGGTTTGTCTTCTCT 57.420 29.630 0.00 0.00 33.70 3.10
3112 6769 9.579932 AGAGAAATCATAAGAAAAGGTTTGTCT 57.420 29.630 0.00 0.00 0.00 3.41
3113 6770 9.833182 GAGAGAAATCATAAGAAAAGGTTTGTC 57.167 33.333 0.00 0.00 0.00 3.18
3114 6771 9.579932 AGAGAGAAATCATAAGAAAAGGTTTGT 57.420 29.630 0.00 0.00 0.00 2.83
3116 6773 9.237187 GGAGAGAGAAATCATAAGAAAAGGTTT 57.763 33.333 0.00 0.00 0.00 3.27
3117 6774 8.610369 AGGAGAGAGAAATCATAAGAAAAGGTT 58.390 33.333 0.00 0.00 0.00 3.50
3118 6775 8.156822 AGGAGAGAGAAATCATAAGAAAAGGT 57.843 34.615 0.00 0.00 0.00 3.50
3119 6776 9.108284 GAAGGAGAGAGAAATCATAAGAAAAGG 57.892 37.037 0.00 0.00 0.00 3.11
3120 6777 9.664332 TGAAGGAGAGAGAAATCATAAGAAAAG 57.336 33.333 0.00 0.00 0.00 2.27
3121 6778 9.442047 GTGAAGGAGAGAGAAATCATAAGAAAA 57.558 33.333 0.00 0.00 0.00 2.29
3122 6779 8.043710 GGTGAAGGAGAGAGAAATCATAAGAAA 58.956 37.037 0.00 0.00 0.00 2.52
3123 6780 7.401493 AGGTGAAGGAGAGAGAAATCATAAGAA 59.599 37.037 0.00 0.00 0.00 2.52
3124 6781 6.900186 AGGTGAAGGAGAGAGAAATCATAAGA 59.100 38.462 0.00 0.00 0.00 2.10
3125 6782 7.123355 AGGTGAAGGAGAGAGAAATCATAAG 57.877 40.000 0.00 0.00 0.00 1.73
3126 6783 6.669591 TGAGGTGAAGGAGAGAGAAATCATAA 59.330 38.462 0.00 0.00 0.00 1.90
3127 6784 6.197903 TGAGGTGAAGGAGAGAGAAATCATA 58.802 40.000 0.00 0.00 0.00 2.15
3128 6785 5.028802 TGAGGTGAAGGAGAGAGAAATCAT 58.971 41.667 0.00 0.00 0.00 2.45
3129 6786 4.420206 TGAGGTGAAGGAGAGAGAAATCA 58.580 43.478 0.00 0.00 0.00 2.57
3130 6787 5.128499 TGATGAGGTGAAGGAGAGAGAAATC 59.872 44.000 0.00 0.00 0.00 2.17
3131 6788 5.028802 TGATGAGGTGAAGGAGAGAGAAAT 58.971 41.667 0.00 0.00 0.00 2.17
3132 6789 4.420206 TGATGAGGTGAAGGAGAGAGAAA 58.580 43.478 0.00 0.00 0.00 2.52
3133 6790 4.053009 TGATGAGGTGAAGGAGAGAGAA 57.947 45.455 0.00 0.00 0.00 2.87
3134 6791 3.746792 TGATGAGGTGAAGGAGAGAGA 57.253 47.619 0.00 0.00 0.00 3.10
3135 6792 5.356291 AAATGATGAGGTGAAGGAGAGAG 57.644 43.478 0.00 0.00 0.00 3.20
3136 6793 6.042552 GGATAAATGATGAGGTGAAGGAGAGA 59.957 42.308 0.00 0.00 0.00 3.10
3137 6794 6.043012 AGGATAAATGATGAGGTGAAGGAGAG 59.957 42.308 0.00 0.00 0.00 3.20
3138 6795 5.907662 AGGATAAATGATGAGGTGAAGGAGA 59.092 40.000 0.00 0.00 0.00 3.71
3139 6796 6.185114 AGGATAAATGATGAGGTGAAGGAG 57.815 41.667 0.00 0.00 0.00 3.69
3140 6797 6.239317 CGTAGGATAAATGATGAGGTGAAGGA 60.239 42.308 0.00 0.00 0.00 3.36
3141 6798 5.928839 CGTAGGATAAATGATGAGGTGAAGG 59.071 44.000 0.00 0.00 0.00 3.46
3142 6799 6.422100 CACGTAGGATAAATGATGAGGTGAAG 59.578 42.308 0.00 0.00 0.00 3.02
3143 6800 6.127168 ACACGTAGGATAAATGATGAGGTGAA 60.127 38.462 0.00 0.00 0.00 3.18
3144 6801 5.362717 ACACGTAGGATAAATGATGAGGTGA 59.637 40.000 0.00 0.00 0.00 4.02
3145 6802 5.601662 ACACGTAGGATAAATGATGAGGTG 58.398 41.667 0.00 0.00 0.00 4.00
3146 6803 5.362717 TGACACGTAGGATAAATGATGAGGT 59.637 40.000 0.00 0.00 0.00 3.85
3147 6804 5.692204 GTGACACGTAGGATAAATGATGAGG 59.308 44.000 0.00 0.00 0.00 3.86
3148 6805 6.507900 AGTGACACGTAGGATAAATGATGAG 58.492 40.000 0.00 0.00 0.00 2.90
3149 6806 6.461092 GGAGTGACACGTAGGATAAATGATGA 60.461 42.308 0.00 0.00 0.00 2.92
3150 6807 5.692204 GGAGTGACACGTAGGATAAATGATG 59.308 44.000 0.00 0.00 0.00 3.07
3151 6808 5.598830 AGGAGTGACACGTAGGATAAATGAT 59.401 40.000 0.00 0.00 0.00 2.45
3152 6809 4.954202 AGGAGTGACACGTAGGATAAATGA 59.046 41.667 0.00 0.00 0.00 2.57
3153 6810 5.263968 AGGAGTGACACGTAGGATAAATG 57.736 43.478 0.00 0.00 0.00 2.32
3154 6811 6.832384 TCTTAGGAGTGACACGTAGGATAAAT 59.168 38.462 0.00 0.00 0.00 1.40
3155 6812 6.182627 TCTTAGGAGTGACACGTAGGATAAA 58.817 40.000 0.00 0.00 0.00 1.40
3156 6813 5.748402 TCTTAGGAGTGACACGTAGGATAA 58.252 41.667 0.00 0.00 0.00 1.75
3157 6814 5.363562 TCTTAGGAGTGACACGTAGGATA 57.636 43.478 0.00 0.00 0.00 2.59
3158 6815 4.232188 TCTTAGGAGTGACACGTAGGAT 57.768 45.455 0.00 0.00 0.00 3.24
3159 6816 3.708403 TCTTAGGAGTGACACGTAGGA 57.292 47.619 0.00 0.00 0.00 2.94
3160 6817 4.023878 GCTATCTTAGGAGTGACACGTAGG 60.024 50.000 0.00 0.00 0.00 3.18
3161 6818 4.575236 TGCTATCTTAGGAGTGACACGTAG 59.425 45.833 0.00 0.00 0.00 3.51
3162 6819 4.334759 GTGCTATCTTAGGAGTGACACGTA 59.665 45.833 0.00 0.00 0.00 3.57
3163 6820 3.128938 GTGCTATCTTAGGAGTGACACGT 59.871 47.826 0.00 0.00 0.00 4.49
3164 6821 3.489398 GGTGCTATCTTAGGAGTGACACG 60.489 52.174 0.00 0.00 0.00 4.49
3165 6822 3.447586 TGGTGCTATCTTAGGAGTGACAC 59.552 47.826 0.00 0.00 0.00 3.67
3166 6823 3.708451 TGGTGCTATCTTAGGAGTGACA 58.292 45.455 0.00 0.00 0.00 3.58
3167 6824 4.946478 ATGGTGCTATCTTAGGAGTGAC 57.054 45.455 0.00 0.00 0.00 3.67
3168 6825 7.728532 TGTATAATGGTGCTATCTTAGGAGTGA 59.271 37.037 0.00 0.00 0.00 3.41
3169 6826 7.896811 TGTATAATGGTGCTATCTTAGGAGTG 58.103 38.462 0.00 0.00 0.00 3.51
3170 6827 8.535335 CATGTATAATGGTGCTATCTTAGGAGT 58.465 37.037 0.00 0.00 0.00 3.85
3171 6828 7.493971 GCATGTATAATGGTGCTATCTTAGGAG 59.506 40.741 0.00 0.00 34.85 3.69
3172 6829 7.331026 GCATGTATAATGGTGCTATCTTAGGA 58.669 38.462 0.00 0.00 34.85 2.94
3173 6830 6.540189 GGCATGTATAATGGTGCTATCTTAGG 59.460 42.308 0.00 0.00 37.70 2.69
3174 6831 6.540189 GGGCATGTATAATGGTGCTATCTTAG 59.460 42.308 0.00 0.00 37.70 2.18
3175 6832 6.215431 AGGGCATGTATAATGGTGCTATCTTA 59.785 38.462 0.00 0.00 37.70 2.10
3176 6833 5.014544 AGGGCATGTATAATGGTGCTATCTT 59.985 40.000 0.00 0.00 37.70 2.40
3177 6834 4.537688 AGGGCATGTATAATGGTGCTATCT 59.462 41.667 0.00 0.00 37.70 1.98
3178 6835 4.848357 AGGGCATGTATAATGGTGCTATC 58.152 43.478 0.00 0.00 37.70 2.08
3179 6836 4.934797 AGGGCATGTATAATGGTGCTAT 57.065 40.909 0.00 0.00 37.70 2.97
3180 6837 4.722526 AAGGGCATGTATAATGGTGCTA 57.277 40.909 0.00 0.00 37.70 3.49
3181 6838 3.600448 AAGGGCATGTATAATGGTGCT 57.400 42.857 0.00 0.00 37.70 4.40
3182 6839 3.188460 CGTAAGGGCATGTATAATGGTGC 59.812 47.826 0.00 0.00 36.88 5.01
3183 6840 3.188460 GCGTAAGGGCATGTATAATGGTG 59.812 47.826 0.00 0.00 38.28 4.17
3184 6841 3.408634 GCGTAAGGGCATGTATAATGGT 58.591 45.455 0.00 0.00 38.28 3.55
3185 6842 2.415168 CGCGTAAGGGCATGTATAATGG 59.585 50.000 0.00 0.00 45.71 3.16
3186 6843 3.722555 CGCGTAAGGGCATGTATAATG 57.277 47.619 0.00 0.00 45.71 1.90
3198 6855 1.520600 AAAACCAAGCCCGCGTAAGG 61.521 55.000 4.92 0.00 38.28 2.69
3260 6917 1.228862 ACATGGCACCTTGAACCCC 60.229 57.895 9.37 0.00 0.00 4.95
3261 6918 0.539438 TCACATGGCACCTTGAACCC 60.539 55.000 9.37 0.00 0.00 4.11
3345 7005 5.883115 TCACAGTCAGTATAGAGTCTGGAAG 59.117 44.000 1.86 0.00 33.13 3.46
3350 7010 5.561679 TGTGTCACAGTCAGTATAGAGTCT 58.438 41.667 0.18 0.00 0.00 3.24
3369 7029 2.224079 CGCTTGAAACTGCATACTGTGT 59.776 45.455 0.00 0.00 0.00 3.72
3372 7032 3.542712 AACGCTTGAAACTGCATACTG 57.457 42.857 0.00 0.00 0.00 2.74
3496 7167 5.070770 TGAAGTGCATTTATTTTGCCGAT 57.929 34.783 0.00 0.00 39.39 4.18
3497 7168 4.484236 CTGAAGTGCATTTATTTTGCCGA 58.516 39.130 0.00 0.00 39.39 5.54
3498 7169 3.061161 GCTGAAGTGCATTTATTTTGCCG 59.939 43.478 0.00 0.00 39.39 5.69
3499 7170 3.995705 TGCTGAAGTGCATTTATTTTGCC 59.004 39.130 0.00 0.00 39.39 4.52
3500 7171 4.925054 TCTGCTGAAGTGCATTTATTTTGC 59.075 37.500 0.00 0.00 42.48 3.68
3501 7172 6.020916 CGATCTGCTGAAGTGCATTTATTTTG 60.021 38.462 0.00 0.00 42.48 2.44
3502 7173 6.032094 CGATCTGCTGAAGTGCATTTATTTT 58.968 36.000 0.00 0.00 42.48 1.82
3503 7174 5.449588 CCGATCTGCTGAAGTGCATTTATTT 60.450 40.000 0.00 0.00 42.48 1.40
3504 7175 4.036027 CCGATCTGCTGAAGTGCATTTATT 59.964 41.667 0.00 0.00 42.48 1.40
3505 7176 3.562973 CCGATCTGCTGAAGTGCATTTAT 59.437 43.478 0.00 0.00 42.48 1.40
3506 7177 2.938451 CCGATCTGCTGAAGTGCATTTA 59.062 45.455 0.00 0.00 42.48 1.40
3507 7178 1.741706 CCGATCTGCTGAAGTGCATTT 59.258 47.619 0.00 0.00 42.48 2.32
3508 7179 1.376543 CCGATCTGCTGAAGTGCATT 58.623 50.000 0.00 0.00 42.48 3.56
3509 7180 1.094073 GCCGATCTGCTGAAGTGCAT 61.094 55.000 1.31 0.00 42.48 3.96
3510 7181 1.742880 GCCGATCTGCTGAAGTGCA 60.743 57.895 1.31 0.00 41.05 4.57
3511 7182 1.300971 TTGCCGATCTGCTGAAGTGC 61.301 55.000 10.62 1.29 0.00 4.40
3512 7183 0.445436 GTTGCCGATCTGCTGAAGTG 59.555 55.000 10.62 0.00 0.00 3.16
3513 7184 0.035317 TGTTGCCGATCTGCTGAAGT 59.965 50.000 10.62 0.00 0.00 3.01
3514 7185 1.376543 ATGTTGCCGATCTGCTGAAG 58.623 50.000 10.62 0.00 0.00 3.02
3515 7186 2.689553 TATGTTGCCGATCTGCTGAA 57.310 45.000 10.62 0.00 0.00 3.02
3516 7187 2.689553 TTATGTTGCCGATCTGCTGA 57.310 45.000 10.62 0.00 0.00 4.26
3517 7188 3.624900 CATTTATGTTGCCGATCTGCTG 58.375 45.455 10.62 0.00 0.00 4.41
3518 7189 2.033801 GCATTTATGTTGCCGATCTGCT 59.966 45.455 10.62 0.00 33.95 4.24
3519 7190 2.223548 TGCATTTATGTTGCCGATCTGC 60.224 45.455 1.59 1.59 39.39 4.26
3520 7191 3.065786 AGTGCATTTATGTTGCCGATCTG 59.934 43.478 0.00 0.00 39.39 2.90
3521 7192 3.282021 AGTGCATTTATGTTGCCGATCT 58.718 40.909 0.00 0.00 39.39 2.75
3522 7193 3.698029 AGTGCATTTATGTTGCCGATC 57.302 42.857 0.00 0.00 39.39 3.69
3523 7194 3.696051 AGAAGTGCATTTATGTTGCCGAT 59.304 39.130 0.00 0.00 39.39 4.18
3526 7197 4.178545 ACAGAAGTGCATTTATGTTGCC 57.821 40.909 15.52 0.00 39.39 4.52
3531 7202 5.872635 ACGATCAACAGAAGTGCATTTATG 58.127 37.500 14.22 14.22 0.00 1.90
3670 7363 6.874278 TCTGGAGAACTCATTGGATTCTTA 57.126 37.500 4.23 0.00 32.83 2.10
3713 7406 7.845037 AGCATAGCACAGTGATATGTATATGT 58.155 34.615 30.35 12.65 45.57 2.29
3714 7407 8.196103 AGAGCATAGCACAGTGATATGTATATG 58.804 37.037 30.35 14.46 45.57 1.78
3715 7408 8.303780 AGAGCATAGCACAGTGATATGTATAT 57.696 34.615 30.35 18.70 45.57 0.86
3716 7409 7.709149 AGAGCATAGCACAGTGATATGTATA 57.291 36.000 30.35 0.14 45.57 1.47
3756 7549 2.869801 TGTGAAGTTTGATCCGTGTGAC 59.130 45.455 0.00 0.00 0.00 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.