Multiple sequence alignment - TraesCS3D01G312500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G312500 chr3D 100.000 4122 0 0 1 4122 426931406 426935527 0.000000e+00 7613.0
1 TraesCS3D01G312500 chr3B 88.709 1975 114 45 515 2441 556645295 556647208 0.000000e+00 2311.0
2 TraesCS3D01G312500 chr3B 92.873 449 25 5 2854 3301 556647654 556648096 0.000000e+00 645.0
3 TraesCS3D01G312500 chr3B 81.766 521 43 25 3617 4118 556650245 556650732 5.000000e-104 388.0
4 TraesCS3D01G312500 chr3B 88.285 239 16 8 2561 2798 556647266 556647493 4.060000e-70 276.0
5 TraesCS3D01G312500 chr3B 92.035 113 9 0 3416 3528 556648092 556648204 4.260000e-35 159.0
6 TraesCS3D01G312500 chr3B 94.845 97 4 1 2789 2885 556647557 556647652 2.570000e-32 150.0
7 TraesCS3D01G312500 chr3A 91.971 1644 88 21 808 2433 561036949 561035332 0.000000e+00 2265.0
8 TraesCS3D01G312500 chr3A 91.820 978 67 8 2564 3538 561035264 561034297 0.000000e+00 1351.0
9 TraesCS3D01G312500 chr3A 93.827 81 5 0 575 655 561037172 561037092 5.600000e-24 122.0
10 TraesCS3D01G312500 chr4D 82.792 308 41 9 3790 4089 302698759 302698456 8.790000e-67 265.0
11 TraesCS3D01G312500 chr4D 80.645 310 42 15 3791 4093 302697706 302697408 1.490000e-54 224.0
12 TraesCS3D01G312500 chr2B 75.873 315 53 11 3789 4097 409929053 409929350 5.560000e-29 139.0
13 TraesCS3D01G312500 chr7D 83.721 129 14 4 3968 4095 399046103 399046225 9.360000e-22 115.0
14 TraesCS3D01G312500 chr6A 88.298 94 9 2 4017 4108 173107986 173107893 1.210000e-20 111.0
15 TraesCS3D01G312500 chr6A 92.537 67 5 0 4042 4108 447171735 447171669 3.390000e-16 97.1
16 TraesCS3D01G312500 chr6B 88.235 85 8 2 4025 4107 232316986 232316902 2.620000e-17 100.0
17 TraesCS3D01G312500 chr1B 83.871 93 7 5 4028 4120 398014378 398014462 9.500000e-12 82.4
18 TraesCS3D01G312500 chr2A 79.646 113 14 6 3987 4095 202880740 202880847 5.720000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G312500 chr3D 426931406 426935527 4121 False 7613.000000 7613 100.000000 1 4122 1 chr3D.!!$F1 4121
1 TraesCS3D01G312500 chr3B 556645295 556650732 5437 False 654.833333 2311 89.752167 515 4118 6 chr3B.!!$F1 3603
2 TraesCS3D01G312500 chr3A 561034297 561037172 2875 True 1246.000000 2265 92.539333 575 3538 3 chr3A.!!$R1 2963
3 TraesCS3D01G312500 chr4D 302697408 302698759 1351 True 244.500000 265 81.718500 3790 4093 2 chr4D.!!$R1 303

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
785 807 0.032615 CTACCTCAGGAGTCAGGCCT 60.033 60.0 0.00 0.0 35.75 5.19 F
1654 1707 0.387878 AGACGAGAAGAAGCTGCACG 60.388 55.0 1.02 0.0 0.00 5.34 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1656 1709 0.042131 TCCGGCCCTTCTCTTCCTTA 59.958 55.0 0.0 0.0 0.00 2.69 R
3539 3722 0.095589 CGAGACGGAAGAGACAGTCG 59.904 60.0 0.0 0.0 39.28 4.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.128259 CTCTGACACGGTGATGGTG 57.872 57.895 16.29 1.58 41.15 4.17
22 23 2.828868 ACACGGTGATGGTGTGCT 59.171 55.556 16.29 0.00 46.22 4.40
23 24 1.148273 ACACGGTGATGGTGTGCTT 59.852 52.632 16.29 0.00 46.22 3.91
24 25 0.884704 ACACGGTGATGGTGTGCTTC 60.885 55.000 16.29 0.00 46.22 3.86
25 26 0.603707 CACGGTGATGGTGTGCTTCT 60.604 55.000 0.74 0.00 0.00 2.85
26 27 0.108585 ACGGTGATGGTGTGCTTCTT 59.891 50.000 0.00 0.00 0.00 2.52
27 28 0.518636 CGGTGATGGTGTGCTTCTTG 59.481 55.000 0.00 0.00 0.00 3.02
28 29 0.242017 GGTGATGGTGTGCTTCTTGC 59.758 55.000 0.00 0.00 43.25 4.01
29 30 1.242076 GTGATGGTGTGCTTCTTGCT 58.758 50.000 0.00 0.00 43.37 3.91
30 31 1.610522 GTGATGGTGTGCTTCTTGCTT 59.389 47.619 0.00 0.00 43.37 3.91
31 32 2.035066 GTGATGGTGTGCTTCTTGCTTT 59.965 45.455 0.00 0.00 43.37 3.51
32 33 2.034939 TGATGGTGTGCTTCTTGCTTTG 59.965 45.455 0.00 0.00 43.37 2.77
33 34 0.746063 TGGTGTGCTTCTTGCTTTGG 59.254 50.000 0.00 0.00 43.37 3.28
34 35 0.746659 GGTGTGCTTCTTGCTTTGGT 59.253 50.000 0.00 0.00 43.37 3.67
35 36 1.269257 GGTGTGCTTCTTGCTTTGGTC 60.269 52.381 0.00 0.00 43.37 4.02
36 37 1.678101 GTGTGCTTCTTGCTTTGGTCT 59.322 47.619 0.00 0.00 43.37 3.85
37 38 2.099756 GTGTGCTTCTTGCTTTGGTCTT 59.900 45.455 0.00 0.00 43.37 3.01
38 39 2.760092 TGTGCTTCTTGCTTTGGTCTTT 59.240 40.909 0.00 0.00 43.37 2.52
39 40 3.118542 GTGCTTCTTGCTTTGGTCTTTG 58.881 45.455 0.00 0.00 43.37 2.77
40 41 2.760092 TGCTTCTTGCTTTGGTCTTTGT 59.240 40.909 0.00 0.00 43.37 2.83
41 42 3.118542 GCTTCTTGCTTTGGTCTTTGTG 58.881 45.455 0.00 0.00 38.95 3.33
42 43 3.429410 GCTTCTTGCTTTGGTCTTTGTGT 60.429 43.478 0.00 0.00 38.95 3.72
43 44 4.747810 CTTCTTGCTTTGGTCTTTGTGTT 58.252 39.130 0.00 0.00 0.00 3.32
44 45 4.108699 TCTTGCTTTGGTCTTTGTGTTG 57.891 40.909 0.00 0.00 0.00 3.33
45 46 3.509575 TCTTGCTTTGGTCTTTGTGTTGT 59.490 39.130 0.00 0.00 0.00 3.32
46 47 4.702612 TCTTGCTTTGGTCTTTGTGTTGTA 59.297 37.500 0.00 0.00 0.00 2.41
47 48 5.184096 TCTTGCTTTGGTCTTTGTGTTGTAA 59.816 36.000 0.00 0.00 0.00 2.41
48 49 5.590530 TGCTTTGGTCTTTGTGTTGTAAT 57.409 34.783 0.00 0.00 0.00 1.89
49 50 5.347342 TGCTTTGGTCTTTGTGTTGTAATG 58.653 37.500 0.00 0.00 0.00 1.90
50 51 4.744631 GCTTTGGTCTTTGTGTTGTAATGG 59.255 41.667 0.00 0.00 0.00 3.16
51 52 5.681179 GCTTTGGTCTTTGTGTTGTAATGGT 60.681 40.000 0.00 0.00 0.00 3.55
52 53 5.508200 TTGGTCTTTGTGTTGTAATGGTC 57.492 39.130 0.00 0.00 0.00 4.02
53 54 4.787551 TGGTCTTTGTGTTGTAATGGTCT 58.212 39.130 0.00 0.00 0.00 3.85
54 55 5.197451 TGGTCTTTGTGTTGTAATGGTCTT 58.803 37.500 0.00 0.00 0.00 3.01
55 56 5.298276 TGGTCTTTGTGTTGTAATGGTCTTC 59.702 40.000 0.00 0.00 0.00 2.87
56 57 5.531287 GGTCTTTGTGTTGTAATGGTCTTCT 59.469 40.000 0.00 0.00 0.00 2.85
57 58 6.039382 GGTCTTTGTGTTGTAATGGTCTTCTT 59.961 38.462 0.00 0.00 0.00 2.52
58 59 7.416326 GGTCTTTGTGTTGTAATGGTCTTCTTT 60.416 37.037 0.00 0.00 0.00 2.52
59 60 7.644157 GTCTTTGTGTTGTAATGGTCTTCTTTC 59.356 37.037 0.00 0.00 0.00 2.62
60 61 6.385649 TTGTGTTGTAATGGTCTTCTTTCC 57.614 37.500 0.00 0.00 0.00 3.13
61 62 5.690865 TGTGTTGTAATGGTCTTCTTTCCT 58.309 37.500 0.00 0.00 0.00 3.36
62 63 5.763204 TGTGTTGTAATGGTCTTCTTTCCTC 59.237 40.000 0.00 0.00 0.00 3.71
63 64 5.998363 GTGTTGTAATGGTCTTCTTTCCTCT 59.002 40.000 0.00 0.00 0.00 3.69
64 65 6.147985 GTGTTGTAATGGTCTTCTTTCCTCTC 59.852 42.308 0.00 0.00 0.00 3.20
65 66 6.043243 TGTTGTAATGGTCTTCTTTCCTCTCT 59.957 38.462 0.00 0.00 0.00 3.10
66 67 6.688073 TGTAATGGTCTTCTTTCCTCTCTT 57.312 37.500 0.00 0.00 0.00 2.85
67 68 7.079451 TGTAATGGTCTTCTTTCCTCTCTTT 57.921 36.000 0.00 0.00 0.00 2.52
68 69 6.936900 TGTAATGGTCTTCTTTCCTCTCTTTG 59.063 38.462 0.00 0.00 0.00 2.77
69 70 5.574970 ATGGTCTTCTTTCCTCTCTTTGT 57.425 39.130 0.00 0.00 0.00 2.83
70 71 4.708177 TGGTCTTCTTTCCTCTCTTTGTG 58.292 43.478 0.00 0.00 0.00 3.33
71 72 4.408921 TGGTCTTCTTTCCTCTCTTTGTGA 59.591 41.667 0.00 0.00 0.00 3.58
72 73 5.072329 TGGTCTTCTTTCCTCTCTTTGTGAT 59.928 40.000 0.00 0.00 0.00 3.06
73 74 6.270000 TGGTCTTCTTTCCTCTCTTTGTGATA 59.730 38.462 0.00 0.00 0.00 2.15
74 75 6.816140 GGTCTTCTTTCCTCTCTTTGTGATAG 59.184 42.308 0.00 0.00 0.00 2.08
75 76 7.382898 GTCTTCTTTCCTCTCTTTGTGATAGT 58.617 38.462 0.00 0.00 0.00 2.12
76 77 7.330700 GTCTTCTTTCCTCTCTTTGTGATAGTG 59.669 40.741 0.00 0.00 0.00 2.74
77 78 6.042638 TCTTTCCTCTCTTTGTGATAGTGG 57.957 41.667 0.00 0.00 0.00 4.00
78 79 5.544176 TCTTTCCTCTCTTTGTGATAGTGGT 59.456 40.000 0.00 0.00 0.00 4.16
79 80 4.808414 TCCTCTCTTTGTGATAGTGGTG 57.192 45.455 0.00 0.00 0.00 4.17
80 81 4.160329 TCCTCTCTTTGTGATAGTGGTGT 58.840 43.478 0.00 0.00 0.00 4.16
81 82 4.593206 TCCTCTCTTTGTGATAGTGGTGTT 59.407 41.667 0.00 0.00 0.00 3.32
82 83 4.692625 CCTCTCTTTGTGATAGTGGTGTTG 59.307 45.833 0.00 0.00 0.00 3.33
83 84 4.065088 TCTCTTTGTGATAGTGGTGTTGC 58.935 43.478 0.00 0.00 0.00 4.17
84 85 2.805671 TCTTTGTGATAGTGGTGTTGCG 59.194 45.455 0.00 0.00 0.00 4.85
85 86 2.535012 TTGTGATAGTGGTGTTGCGA 57.465 45.000 0.00 0.00 0.00 5.10
86 87 2.535012 TGTGATAGTGGTGTTGCGAA 57.465 45.000 0.00 0.00 0.00 4.70
87 88 2.139917 TGTGATAGTGGTGTTGCGAAC 58.860 47.619 0.00 0.00 0.00 3.95
88 89 2.139917 GTGATAGTGGTGTTGCGAACA 58.860 47.619 0.00 0.00 39.52 3.18
89 90 2.546368 GTGATAGTGGTGTTGCGAACAA 59.454 45.455 3.74 0.00 44.16 2.83
97 98 3.249999 TTGCGAACAACTAGCGGC 58.750 55.556 0.00 0.00 0.00 6.53
98 99 1.301401 TTGCGAACAACTAGCGGCT 60.301 52.632 7.98 7.98 0.00 5.52
99 100 1.289109 TTGCGAACAACTAGCGGCTC 61.289 55.000 5.39 0.00 0.00 4.70
100 101 2.453638 GCGAACAACTAGCGGCTCC 61.454 63.158 5.39 0.00 0.00 4.70
101 102 1.080093 CGAACAACTAGCGGCTCCA 60.080 57.895 5.39 0.00 0.00 3.86
102 103 0.669318 CGAACAACTAGCGGCTCCAA 60.669 55.000 5.39 0.00 0.00 3.53
103 104 0.796927 GAACAACTAGCGGCTCCAAC 59.203 55.000 5.39 0.00 0.00 3.77
104 105 0.107831 AACAACTAGCGGCTCCAACA 59.892 50.000 5.39 0.00 0.00 3.33
105 106 0.602905 ACAACTAGCGGCTCCAACAC 60.603 55.000 5.39 0.00 0.00 3.32
106 107 1.003718 AACTAGCGGCTCCAACACC 60.004 57.895 5.39 0.00 0.00 4.16
111 112 2.742372 CGGCTCCAACACCGGAAG 60.742 66.667 9.46 1.96 45.74 3.46
135 136 2.531685 CCTTGGGGACTGGGGTGA 60.532 66.667 0.00 0.00 33.58 4.02
136 137 1.930656 CCTTGGGGACTGGGGTGAT 60.931 63.158 0.00 0.00 33.58 3.06
137 138 0.623324 CCTTGGGGACTGGGGTGATA 60.623 60.000 0.00 0.00 33.58 2.15
138 139 1.522900 CTTGGGGACTGGGGTGATAT 58.477 55.000 0.00 0.00 0.00 1.63
139 140 1.421646 CTTGGGGACTGGGGTGATATC 59.578 57.143 0.00 0.00 0.00 1.63
140 141 0.401395 TGGGGACTGGGGTGATATCC 60.401 60.000 0.00 0.00 0.00 2.59
141 142 2.464582 GGGACTGGGGTGATATCCC 58.535 63.158 0.00 1.02 46.31 3.85
159 160 1.912417 CCCCCGTTGTTTATCCAACA 58.088 50.000 5.08 0.00 43.89 3.33
170 171 6.045072 TGTTTATCCAACAACGATAGGACT 57.955 37.500 0.00 0.00 42.76 3.85
171 172 5.872617 TGTTTATCCAACAACGATAGGACTG 59.127 40.000 0.00 0.00 42.76 3.51
172 173 5.670792 TTATCCAACAACGATAGGACTGT 57.329 39.130 0.00 0.00 43.77 3.55
173 174 3.313012 TCCAACAACGATAGGACTGTG 57.687 47.619 0.00 0.00 43.77 3.66
174 175 2.028476 TCCAACAACGATAGGACTGTGG 60.028 50.000 0.00 0.00 43.77 4.17
175 176 2.289444 CCAACAACGATAGGACTGTGGT 60.289 50.000 0.00 0.00 43.77 4.16
176 177 3.056393 CCAACAACGATAGGACTGTGGTA 60.056 47.826 0.00 0.00 43.77 3.25
177 178 4.382685 CCAACAACGATAGGACTGTGGTAT 60.383 45.833 0.00 0.00 43.77 2.73
178 179 4.650754 ACAACGATAGGACTGTGGTATC 57.349 45.455 0.00 0.00 43.77 2.24
179 180 3.383825 ACAACGATAGGACTGTGGTATCC 59.616 47.826 0.00 0.00 43.77 2.59
181 182 3.912248 ACGATAGGACTGTGGTATCCTT 58.088 45.455 0.00 0.00 43.09 3.36
182 183 4.287552 ACGATAGGACTGTGGTATCCTTT 58.712 43.478 0.00 0.00 43.09 3.11
183 184 4.341520 ACGATAGGACTGTGGTATCCTTTC 59.658 45.833 0.00 0.00 43.09 2.62
184 185 4.262079 CGATAGGACTGTGGTATCCTTTCC 60.262 50.000 0.00 0.00 43.09 3.13
185 186 2.197465 AGGACTGTGGTATCCTTTCCC 58.803 52.381 0.00 0.00 43.09 3.97
186 187 1.212195 GGACTGTGGTATCCTTTCCCC 59.788 57.143 0.00 0.00 31.75 4.81
187 188 2.197465 GACTGTGGTATCCTTTCCCCT 58.803 52.381 0.00 0.00 0.00 4.79
188 189 2.170817 GACTGTGGTATCCTTTCCCCTC 59.829 54.545 0.00 0.00 0.00 4.30
189 190 2.225908 ACTGTGGTATCCTTTCCCCTCT 60.226 50.000 0.00 0.00 0.00 3.69
190 191 2.846827 CTGTGGTATCCTTTCCCCTCTT 59.153 50.000 0.00 0.00 0.00 2.85
191 192 2.576191 TGTGGTATCCTTTCCCCTCTTG 59.424 50.000 0.00 0.00 0.00 3.02
192 193 2.092375 GTGGTATCCTTTCCCCTCTTGG 60.092 54.545 0.00 0.00 0.00 3.61
202 203 3.793060 CCTCTTGGGTGTCTCCGT 58.207 61.111 0.00 0.00 37.00 4.69
203 204 1.293498 CCTCTTGGGTGTCTCCGTG 59.707 63.158 0.00 0.00 37.00 4.94
204 205 1.185618 CCTCTTGGGTGTCTCCGTGA 61.186 60.000 0.00 0.00 37.00 4.35
205 206 0.898320 CTCTTGGGTGTCTCCGTGAT 59.102 55.000 0.00 0.00 37.00 3.06
206 207 0.608130 TCTTGGGTGTCTCCGTGATG 59.392 55.000 0.00 0.00 37.00 3.07
207 208 0.321671 CTTGGGTGTCTCCGTGATGT 59.678 55.000 0.00 0.00 37.00 3.06
208 209 0.034756 TTGGGTGTCTCCGTGATGTG 59.965 55.000 0.00 0.00 37.00 3.21
209 210 0.830023 TGGGTGTCTCCGTGATGTGA 60.830 55.000 0.00 0.00 37.00 3.58
210 211 0.389948 GGGTGTCTCCGTGATGTGAC 60.390 60.000 0.00 0.00 37.00 3.67
211 212 0.389948 GGTGTCTCCGTGATGTGACC 60.390 60.000 0.00 0.00 0.00 4.02
212 213 0.317160 GTGTCTCCGTGATGTGACCA 59.683 55.000 0.00 0.00 0.00 4.02
213 214 0.317160 TGTCTCCGTGATGTGACCAC 59.683 55.000 0.00 0.00 0.00 4.16
214 215 0.603569 GTCTCCGTGATGTGACCACT 59.396 55.000 1.62 0.00 32.64 4.00
215 216 1.816835 GTCTCCGTGATGTGACCACTA 59.183 52.381 1.62 0.00 32.64 2.74
216 217 2.427453 GTCTCCGTGATGTGACCACTAT 59.573 50.000 1.62 0.00 32.64 2.12
217 218 2.688446 TCTCCGTGATGTGACCACTATC 59.312 50.000 1.62 4.28 32.64 2.08
218 219 2.427095 CTCCGTGATGTGACCACTATCA 59.573 50.000 1.62 6.48 32.64 2.15
219 220 3.031013 TCCGTGATGTGACCACTATCAT 58.969 45.455 13.90 0.00 34.20 2.45
220 221 3.126073 CCGTGATGTGACCACTATCATG 58.874 50.000 17.77 17.77 36.61 3.07
221 222 3.126073 CGTGATGTGACCACTATCATGG 58.874 50.000 17.36 0.00 46.10 3.66
222 223 2.874701 GTGATGTGACCACTATCATGGC 59.125 50.000 13.90 0.00 44.33 4.40
223 224 2.158769 TGATGTGACCACTATCATGGCC 60.159 50.000 0.00 0.00 44.33 5.36
224 225 1.284313 TGTGACCACTATCATGGCCA 58.716 50.000 8.56 8.56 44.33 5.36
225 226 1.632920 TGTGACCACTATCATGGCCAA 59.367 47.619 10.96 0.00 44.33 4.52
226 227 2.292267 GTGACCACTATCATGGCCAAG 58.708 52.381 10.96 5.19 44.33 3.61
227 228 1.915489 TGACCACTATCATGGCCAAGT 59.085 47.619 10.96 5.56 44.33 3.16
228 229 2.308570 TGACCACTATCATGGCCAAGTT 59.691 45.455 10.96 2.38 44.33 2.66
229 230 2.684881 GACCACTATCATGGCCAAGTTG 59.315 50.000 10.96 7.22 44.33 3.16
230 231 2.026641 CCACTATCATGGCCAAGTTGG 58.973 52.381 18.17 18.17 41.55 3.77
249 250 4.647424 TGGCACAAGTTTTGTTTAGGAG 57.353 40.909 0.00 0.00 43.23 3.69
250 251 4.274147 TGGCACAAGTTTTGTTTAGGAGA 58.726 39.130 0.00 0.00 43.23 3.71
251 252 4.892934 TGGCACAAGTTTTGTTTAGGAGAT 59.107 37.500 0.00 0.00 43.23 2.75
252 253 5.221224 TGGCACAAGTTTTGTTTAGGAGATG 60.221 40.000 0.00 0.00 43.23 2.90
253 254 5.222631 GCACAAGTTTTGTTTAGGAGATGG 58.777 41.667 0.00 0.00 43.23 3.51
254 255 5.221244 GCACAAGTTTTGTTTAGGAGATGGT 60.221 40.000 0.00 0.00 43.23 3.55
255 256 6.682861 GCACAAGTTTTGTTTAGGAGATGGTT 60.683 38.462 0.00 0.00 43.23 3.67
256 257 6.918022 CACAAGTTTTGTTTAGGAGATGGTTC 59.082 38.462 0.00 0.00 43.23 3.62
257 258 6.605594 ACAAGTTTTGTTTAGGAGATGGTTCA 59.394 34.615 0.00 0.00 42.22 3.18
258 259 6.884280 AGTTTTGTTTAGGAGATGGTTCAG 57.116 37.500 0.00 0.00 0.00 3.02
259 260 5.241728 AGTTTTGTTTAGGAGATGGTTCAGC 59.758 40.000 0.00 0.00 0.00 4.26
260 261 4.640771 TTGTTTAGGAGATGGTTCAGCT 57.359 40.909 0.00 0.00 30.65 4.24
261 262 4.207891 TGTTTAGGAGATGGTTCAGCTC 57.792 45.455 4.77 4.77 44.92 4.09
262 263 3.840666 TGTTTAGGAGATGGTTCAGCTCT 59.159 43.478 12.03 2.86 44.99 4.09
263 264 5.023452 TGTTTAGGAGATGGTTCAGCTCTA 58.977 41.667 12.03 2.07 44.99 2.43
264 265 5.483937 TGTTTAGGAGATGGTTCAGCTCTAA 59.516 40.000 12.03 6.93 44.99 2.10
265 266 5.860941 TTAGGAGATGGTTCAGCTCTAAG 57.139 43.478 12.03 0.00 44.99 2.18
266 267 3.987745 AGGAGATGGTTCAGCTCTAAGA 58.012 45.455 12.03 0.00 44.99 2.10
267 268 4.555689 AGGAGATGGTTCAGCTCTAAGAT 58.444 43.478 12.03 0.00 44.99 2.40
268 269 4.344679 AGGAGATGGTTCAGCTCTAAGATG 59.655 45.833 12.03 0.00 44.99 2.90
269 270 4.100808 GGAGATGGTTCAGCTCTAAGATGT 59.899 45.833 12.03 0.00 44.99 3.06
270 271 5.396213 GGAGATGGTTCAGCTCTAAGATGTT 60.396 44.000 12.03 0.00 44.99 2.71
271 272 6.059787 AGATGGTTCAGCTCTAAGATGTTT 57.940 37.500 0.00 0.00 32.57 2.83
272 273 5.879223 AGATGGTTCAGCTCTAAGATGTTTG 59.121 40.000 0.00 0.00 32.57 2.93
273 274 5.227569 TGGTTCAGCTCTAAGATGTTTGA 57.772 39.130 0.00 0.00 32.57 2.69
274 275 5.809001 TGGTTCAGCTCTAAGATGTTTGAT 58.191 37.500 0.00 0.00 32.57 2.57
275 276 5.877012 TGGTTCAGCTCTAAGATGTTTGATC 59.123 40.000 0.00 0.00 32.57 2.92
276 277 6.112058 GGTTCAGCTCTAAGATGTTTGATCT 58.888 40.000 0.00 0.00 32.57 2.75
277 278 7.093333 TGGTTCAGCTCTAAGATGTTTGATCTA 60.093 37.037 0.00 0.00 32.57 1.98
278 279 7.223777 GGTTCAGCTCTAAGATGTTTGATCTAC 59.776 40.741 0.00 0.00 32.57 2.59
279 280 7.410120 TCAGCTCTAAGATGTTTGATCTACA 57.590 36.000 4.14 4.14 32.57 2.74
280 281 8.016301 TCAGCTCTAAGATGTTTGATCTACAT 57.984 34.615 12.07 12.07 38.86 2.29
281 282 9.136323 TCAGCTCTAAGATGTTTGATCTACATA 57.864 33.333 12.17 0.38 36.41 2.29
282 283 9.755804 CAGCTCTAAGATGTTTGATCTACATAA 57.244 33.333 12.17 3.67 36.41 1.90
283 284 9.979578 AGCTCTAAGATGTTTGATCTACATAAG 57.020 33.333 12.17 10.54 36.41 1.73
284 285 9.202273 GCTCTAAGATGTTTGATCTACATAAGG 57.798 37.037 12.17 5.88 36.41 2.69
285 286 9.202273 CTCTAAGATGTTTGATCTACATAAGGC 57.798 37.037 12.17 3.27 36.41 4.35
286 287 8.928448 TCTAAGATGTTTGATCTACATAAGGCT 58.072 33.333 12.17 5.01 36.41 4.58
287 288 9.553064 CTAAGATGTTTGATCTACATAAGGCTT 57.447 33.333 4.58 4.58 36.41 4.35
288 289 8.443953 AAGATGTTTGATCTACATAAGGCTTC 57.556 34.615 1.30 0.00 36.41 3.86
289 290 7.800092 AGATGTTTGATCTACATAAGGCTTCT 58.200 34.615 1.30 0.00 36.41 2.85
290 291 8.928448 AGATGTTTGATCTACATAAGGCTTCTA 58.072 33.333 1.30 0.00 36.41 2.10
291 292 9.717942 GATGTTTGATCTACATAAGGCTTCTAT 57.282 33.333 1.30 0.00 36.41 1.98
301 302 9.703892 CTACATAAGGCTTCTATATATGATGGC 57.296 37.037 1.30 6.12 35.43 4.40
302 303 8.094284 ACATAAGGCTTCTATATATGATGGCA 57.906 34.615 1.30 0.00 36.88 4.92
303 304 8.551440 ACATAAGGCTTCTATATATGATGGCAA 58.449 33.333 1.30 10.96 36.88 4.52
304 305 8.834465 CATAAGGCTTCTATATATGATGGCAAC 58.166 37.037 1.30 0.00 36.88 4.17
305 306 6.633325 AGGCTTCTATATATGATGGCAACT 57.367 37.500 17.77 0.00 36.88 3.16
306 307 7.025520 AGGCTTCTATATATGATGGCAACTT 57.974 36.000 17.77 0.00 36.88 2.66
307 308 7.108847 AGGCTTCTATATATGATGGCAACTTC 58.891 38.462 17.77 0.00 41.00 3.01
308 309 7.037730 AGGCTTCTATATATGATGGCAACTTCT 60.038 37.037 17.77 0.00 41.19 2.85
309 310 7.609532 GGCTTCTATATATGATGGCAACTTCTT 59.390 37.037 0.00 0.00 41.19 2.52
310 311 8.663911 GCTTCTATATATGATGGCAACTTCTTC 58.336 37.037 0.00 0.00 41.19 2.87
311 312 9.941325 CTTCTATATATGATGGCAACTTCTTCT 57.059 33.333 0.00 0.00 41.19 2.85
312 313 9.935241 TTCTATATATGATGGCAACTTCTTCTC 57.065 33.333 0.00 0.00 41.19 2.87
313 314 9.319060 TCTATATATGATGGCAACTTCTTCTCT 57.681 33.333 0.00 0.00 41.19 3.10
317 318 6.998968 ATGATGGCAACTTCTTCTCTAAAG 57.001 37.500 0.00 0.00 41.19 1.85
318 319 4.697352 TGATGGCAACTTCTTCTCTAAAGC 59.303 41.667 0.00 0.00 41.19 3.51
319 320 3.067106 TGGCAACTTCTTCTCTAAAGCG 58.933 45.455 0.00 0.00 37.61 4.68
320 321 3.067833 GGCAACTTCTTCTCTAAAGCGT 58.932 45.455 0.00 0.00 0.00 5.07
321 322 3.123790 GGCAACTTCTTCTCTAAAGCGTC 59.876 47.826 0.00 0.00 0.00 5.19
322 323 3.181539 GCAACTTCTTCTCTAAAGCGTCG 60.182 47.826 0.00 0.00 0.00 5.12
323 324 3.219052 ACTTCTTCTCTAAAGCGTCGG 57.781 47.619 0.00 0.00 0.00 4.79
324 325 2.557490 ACTTCTTCTCTAAAGCGTCGGT 59.443 45.455 0.00 0.00 0.00 4.69
325 326 2.915738 TCTTCTCTAAAGCGTCGGTC 57.084 50.000 0.00 0.00 0.00 4.79
326 327 1.471684 TCTTCTCTAAAGCGTCGGTCC 59.528 52.381 0.00 0.00 0.00 4.46
327 328 1.201647 CTTCTCTAAAGCGTCGGTCCA 59.798 52.381 0.00 0.00 0.00 4.02
328 329 0.809385 TCTCTAAAGCGTCGGTCCAG 59.191 55.000 0.00 0.00 0.00 3.86
329 330 0.802607 CTCTAAAGCGTCGGTCCAGC 60.803 60.000 0.00 0.00 0.00 4.85
330 331 1.215647 CTAAAGCGTCGGTCCAGCT 59.784 57.895 0.00 0.00 43.90 4.24
331 332 1.078759 CTAAAGCGTCGGTCCAGCTG 61.079 60.000 6.78 6.78 41.53 4.24
332 333 2.501223 TAAAGCGTCGGTCCAGCTGG 62.501 60.000 27.87 27.87 41.53 4.85
341 342 2.449777 TCCAGCTGGACCCTAGCA 59.550 61.111 32.00 6.91 43.53 3.49
342 343 1.990060 TCCAGCTGGACCCTAGCAC 60.990 63.158 32.00 0.00 43.53 4.40
343 344 2.185350 CAGCTGGACCCTAGCACG 59.815 66.667 5.57 0.00 43.53 5.34
344 345 2.037367 AGCTGGACCCTAGCACGA 59.963 61.111 6.59 0.00 43.53 4.35
345 346 2.184579 GCTGGACCCTAGCACGAC 59.815 66.667 0.00 0.00 40.81 4.34
346 347 2.490217 CTGGACCCTAGCACGACG 59.510 66.667 0.00 0.00 0.00 5.12
347 348 2.034532 TGGACCCTAGCACGACGA 59.965 61.111 0.00 0.00 0.00 4.20
348 349 2.267681 CTGGACCCTAGCACGACGAC 62.268 65.000 0.00 0.00 0.00 4.34
349 350 2.045131 GGACCCTAGCACGACGACT 61.045 63.158 0.00 0.59 0.00 4.18
350 351 1.593296 GGACCCTAGCACGACGACTT 61.593 60.000 0.00 0.00 0.00 3.01
351 352 0.179169 GACCCTAGCACGACGACTTC 60.179 60.000 0.00 0.00 0.00 3.01
352 353 1.139095 CCCTAGCACGACGACTTCC 59.861 63.158 0.00 0.00 0.00 3.46
353 354 1.139095 CCTAGCACGACGACTTCCC 59.861 63.158 0.00 0.00 0.00 3.97
354 355 1.226323 CTAGCACGACGACTTCCCG 60.226 63.158 0.00 0.00 0.00 5.14
355 356 1.642037 CTAGCACGACGACTTCCCGA 61.642 60.000 0.00 0.00 0.00 5.14
356 357 1.915614 TAGCACGACGACTTCCCGAC 61.916 60.000 0.00 0.00 0.00 4.79
357 358 2.126580 CACGACGACTTCCCGACC 60.127 66.667 0.00 0.00 0.00 4.79
358 359 3.730761 ACGACGACTTCCCGACCG 61.731 66.667 0.00 0.00 36.17 4.79
360 361 4.047059 GACGACTTCCCGACCGCA 62.047 66.667 0.00 0.00 0.00 5.69
361 362 3.352338 GACGACTTCCCGACCGCAT 62.352 63.158 0.00 0.00 0.00 4.73
362 363 2.885644 CGACTTCCCGACCGCATG 60.886 66.667 0.00 0.00 0.00 4.06
363 364 2.511600 GACTTCCCGACCGCATGG 60.512 66.667 0.00 0.00 42.84 3.66
373 374 3.276109 CCGCATGGTGCAATGTCA 58.724 55.556 2.63 0.00 45.36 3.58
374 375 1.138036 CCGCATGGTGCAATGTCAG 59.862 57.895 2.63 0.00 45.36 3.51
375 376 1.515519 CGCATGGTGCAATGTCAGC 60.516 57.895 2.63 1.12 45.36 4.26
376 377 1.153706 GCATGGTGCAATGTCAGCC 60.154 57.895 0.00 0.00 44.26 4.85
377 378 1.601419 GCATGGTGCAATGTCAGCCT 61.601 55.000 0.00 0.00 44.26 4.58
378 379 0.172578 CATGGTGCAATGTCAGCCTG 59.827 55.000 0.00 0.00 33.82 4.85
379 380 0.968901 ATGGTGCAATGTCAGCCTGG 60.969 55.000 0.00 0.00 33.82 4.45
380 381 2.570181 GTGCAATGTCAGCCTGGC 59.430 61.111 11.65 11.65 0.00 4.85
381 382 1.975407 GTGCAATGTCAGCCTGGCT 60.975 57.895 17.22 17.22 40.77 4.75
382 383 1.228644 TGCAATGTCAGCCTGGCTT 60.229 52.632 20.79 0.52 36.40 4.35
383 384 1.246056 TGCAATGTCAGCCTGGCTTC 61.246 55.000 20.79 15.51 36.40 3.86
384 385 1.798735 CAATGTCAGCCTGGCTTCG 59.201 57.895 20.79 9.29 36.40 3.79
385 386 0.957395 CAATGTCAGCCTGGCTTCGT 60.957 55.000 20.79 13.55 36.40 3.85
386 387 0.957395 AATGTCAGCCTGGCTTCGTG 60.957 55.000 20.79 9.06 36.40 4.35
387 388 1.830587 ATGTCAGCCTGGCTTCGTGA 61.831 55.000 20.79 11.59 36.40 4.35
388 389 1.301716 GTCAGCCTGGCTTCGTGAA 60.302 57.895 20.79 0.00 36.40 3.18
389 390 1.004560 TCAGCCTGGCTTCGTGAAG 60.005 57.895 20.79 5.98 36.40 3.02
400 401 3.951979 CTTCGTGAAGCTTGAGTTTGT 57.048 42.857 2.10 0.00 0.00 2.83
401 402 4.278678 CTTCGTGAAGCTTGAGTTTGTT 57.721 40.909 2.10 0.00 0.00 2.83
402 403 4.662145 CTTCGTGAAGCTTGAGTTTGTTT 58.338 39.130 2.10 0.00 0.00 2.83
403 404 4.014847 TCGTGAAGCTTGAGTTTGTTTG 57.985 40.909 2.10 0.00 0.00 2.93
404 405 2.531508 CGTGAAGCTTGAGTTTGTTTGC 59.468 45.455 2.10 0.00 0.00 3.68
405 406 3.731867 CGTGAAGCTTGAGTTTGTTTGCT 60.732 43.478 2.10 0.00 0.00 3.91
406 407 4.176271 GTGAAGCTTGAGTTTGTTTGCTT 58.824 39.130 2.10 0.00 42.42 3.91
408 409 3.443099 AGCTTGAGTTTGTTTGCTTCC 57.557 42.857 0.00 0.00 0.00 3.46
409 410 2.119457 GCTTGAGTTTGTTTGCTTCCG 58.881 47.619 0.00 0.00 0.00 4.30
410 411 2.479560 GCTTGAGTTTGTTTGCTTCCGT 60.480 45.455 0.00 0.00 0.00 4.69
411 412 2.842208 TGAGTTTGTTTGCTTCCGTG 57.158 45.000 0.00 0.00 0.00 4.94
412 413 2.360844 TGAGTTTGTTTGCTTCCGTGA 58.639 42.857 0.00 0.00 0.00 4.35
413 414 2.948979 TGAGTTTGTTTGCTTCCGTGAT 59.051 40.909 0.00 0.00 0.00 3.06
414 415 4.130857 TGAGTTTGTTTGCTTCCGTGATA 58.869 39.130 0.00 0.00 0.00 2.15
415 416 4.576873 TGAGTTTGTTTGCTTCCGTGATAA 59.423 37.500 0.00 0.00 0.00 1.75
416 417 4.855531 AGTTTGTTTGCTTCCGTGATAAC 58.144 39.130 0.00 0.00 0.00 1.89
417 418 3.907894 TTGTTTGCTTCCGTGATAACC 57.092 42.857 0.00 0.00 0.00 2.85
418 419 3.134574 TGTTTGCTTCCGTGATAACCT 57.865 42.857 0.00 0.00 0.00 3.50
419 420 4.274602 TGTTTGCTTCCGTGATAACCTA 57.725 40.909 0.00 0.00 0.00 3.08
420 421 4.643463 TGTTTGCTTCCGTGATAACCTAA 58.357 39.130 0.00 0.00 0.00 2.69
421 422 5.250200 TGTTTGCTTCCGTGATAACCTAAT 58.750 37.500 0.00 0.00 0.00 1.73
422 423 5.708230 TGTTTGCTTCCGTGATAACCTAATT 59.292 36.000 0.00 0.00 0.00 1.40
423 424 5.811399 TTGCTTCCGTGATAACCTAATTG 57.189 39.130 0.00 0.00 0.00 2.32
424 425 4.839121 TGCTTCCGTGATAACCTAATTGT 58.161 39.130 0.00 0.00 0.00 2.71
425 426 5.979993 TGCTTCCGTGATAACCTAATTGTA 58.020 37.500 0.00 0.00 0.00 2.41
426 427 6.408035 TGCTTCCGTGATAACCTAATTGTAA 58.592 36.000 0.00 0.00 0.00 2.41
427 428 7.051623 TGCTTCCGTGATAACCTAATTGTAAT 58.948 34.615 0.00 0.00 0.00 1.89
428 429 7.554835 TGCTTCCGTGATAACCTAATTGTAATT 59.445 33.333 0.00 0.00 0.00 1.40
429 430 8.403236 GCTTCCGTGATAACCTAATTGTAATTT 58.597 33.333 0.00 0.00 0.00 1.82
430 431 9.716507 CTTCCGTGATAACCTAATTGTAATTTG 57.283 33.333 0.00 0.00 0.00 2.32
431 432 7.699566 TCCGTGATAACCTAATTGTAATTTGC 58.300 34.615 0.00 0.00 0.00 3.68
432 433 7.554835 TCCGTGATAACCTAATTGTAATTTGCT 59.445 33.333 0.00 0.00 0.00 3.91
433 434 8.188139 CCGTGATAACCTAATTGTAATTTGCTT 58.812 33.333 0.00 0.00 0.00 3.91
434 435 9.009327 CGTGATAACCTAATTGTAATTTGCTTG 57.991 33.333 0.00 0.00 0.00 4.01
435 436 9.855021 GTGATAACCTAATTGTAATTTGCTTGT 57.145 29.630 0.00 0.00 0.00 3.16
440 441 9.830975 AACCTAATTGTAATTTGCTTGTTTTCT 57.169 25.926 0.00 0.00 0.00 2.52
441 442 9.830975 ACCTAATTGTAATTTGCTTGTTTTCTT 57.169 25.926 0.00 0.00 0.00 2.52
527 528 2.229784 CCCAGAAATGCAAGGACAAGAC 59.770 50.000 0.00 0.00 0.00 3.01
530 531 2.151202 GAAATGCAAGGACAAGACGGA 58.849 47.619 0.00 0.00 0.00 4.69
596 597 3.071479 GGAATGTAGCACGGTCTTGAAA 58.929 45.455 0.00 0.00 0.00 2.69
644 645 1.524621 GAGGTGGGCCATCACATCG 60.525 63.158 21.02 0.00 38.40 3.84
671 672 0.101579 GACGAAGGTCTAGAGCCAGC 59.898 60.000 18.14 7.19 40.15 4.85
672 673 1.324005 ACGAAGGTCTAGAGCCAGCC 61.324 60.000 18.14 3.20 0.00 4.85
673 674 1.040339 CGAAGGTCTAGAGCCAGCCT 61.040 60.000 18.14 5.67 0.00 4.58
692 705 6.351711 CCAGCCTCTCCTCCATATAAATACTG 60.352 46.154 0.00 0.00 0.00 2.74
697 710 9.101325 CCTCTCCTCCATATAAATACTGGTTTA 57.899 37.037 0.00 0.00 0.00 2.01
704 717 8.387813 TCCATATAAATACTGGTTTACCCCATC 58.612 37.037 0.00 0.00 33.00 3.51
705 718 7.614192 CCATATAAATACTGGTTTACCCCATCC 59.386 40.741 0.00 0.00 33.00 3.51
706 719 3.570912 AATACTGGTTTACCCCATCCG 57.429 47.619 0.00 0.00 33.00 4.18
709 722 1.003928 ACTGGTTTACCCCATCCGAAC 59.996 52.381 0.00 0.00 33.00 3.95
710 723 0.328926 TGGTTTACCCCATCCGAACC 59.671 55.000 0.00 0.00 40.06 3.62
711 724 0.328926 GGTTTACCCCATCCGAACCA 59.671 55.000 0.00 0.00 39.56 3.67
712 725 1.064240 GGTTTACCCCATCCGAACCAT 60.064 52.381 0.00 0.00 39.56 3.55
713 726 2.294979 GTTTACCCCATCCGAACCATC 58.705 52.381 0.00 0.00 0.00 3.51
723 736 3.267900 CGAACCATCGCCGTATTCT 57.732 52.632 0.00 0.00 42.96 2.40
724 737 2.410785 CGAACCATCGCCGTATTCTA 57.589 50.000 0.00 0.00 42.96 2.10
725 738 2.734670 CGAACCATCGCCGTATTCTAA 58.265 47.619 0.00 0.00 42.96 2.10
726 739 3.314553 CGAACCATCGCCGTATTCTAAT 58.685 45.455 0.00 0.00 42.96 1.73
727 740 3.364023 CGAACCATCGCCGTATTCTAATC 59.636 47.826 0.00 0.00 42.96 1.75
728 741 3.314541 ACCATCGCCGTATTCTAATCC 57.685 47.619 0.00 0.00 0.00 3.01
729 742 2.631062 ACCATCGCCGTATTCTAATCCA 59.369 45.455 0.00 0.00 0.00 3.41
730 743 3.260884 ACCATCGCCGTATTCTAATCCAT 59.739 43.478 0.00 0.00 0.00 3.41
738 751 4.021368 CCGTATTCTAATCCATTCCTCGGT 60.021 45.833 0.00 0.00 0.00 4.69
742 755 1.068588 CTAATCCATTCCTCGGTCGCA 59.931 52.381 0.00 0.00 0.00 5.10
744 757 0.462047 ATCCATTCCTCGGTCGCAAC 60.462 55.000 0.00 0.00 0.00 4.17
767 780 5.661759 ACAGATTCCCGAACCTAAACTATCT 59.338 40.000 0.00 0.00 0.00 1.98
782 804 4.447138 ACTATCTACCTCAGGAGTCAGG 57.553 50.000 0.00 0.00 35.69 3.86
785 807 0.032615 CTACCTCAGGAGTCAGGCCT 60.033 60.000 0.00 0.00 35.75 5.19
794 816 3.749064 GTCAGGCCTGCGACTCGA 61.749 66.667 28.91 5.83 0.00 4.04
806 828 3.622514 ACTCGATCAGTCAGGGGC 58.377 61.111 0.00 0.00 0.00 5.80
812 852 0.842635 GATCAGTCAGGGGCCATCTT 59.157 55.000 4.39 0.00 0.00 2.40
822 862 4.402851 GCCATCTTGAGCCACACA 57.597 55.556 0.00 0.00 0.00 3.72
829 869 1.141657 TCTTGAGCCACACAAGCTTCT 59.858 47.619 0.00 0.00 41.75 2.85
844 884 3.855858 AGCTTCTCTTGATTCTCGAACC 58.144 45.455 0.00 0.00 0.00 3.62
847 887 4.677584 CTTCTCTTGATTCTCGAACCGAT 58.322 43.478 0.00 0.00 34.61 4.18
919 963 1.421268 ACTGTCAGCCAAAGATCCACA 59.579 47.619 0.00 0.00 0.00 4.17
1071 1120 2.168521 CAGGAGGATCAACGTGGTGTAT 59.831 50.000 0.00 0.00 36.25 2.29
1188 1237 2.168313 GCCTCCTCCTCTTCTTCTTCTG 59.832 54.545 0.00 0.00 0.00 3.02
1189 1238 2.765699 CCTCCTCCTCTTCTTCTTCTGG 59.234 54.545 0.00 0.00 0.00 3.86
1194 1243 3.497332 TCCTCTTCTTCTTCTGGTTCGA 58.503 45.455 0.00 0.00 0.00 3.71
1210 1259 1.032014 TCGACAGATGCATCGATCCA 58.968 50.000 20.67 8.55 42.18 3.41
1215 1264 4.610007 CGACAGATGCATCGATCCATTTTC 60.610 45.833 20.67 3.80 40.86 2.29
1269 1321 7.595130 CCGTCGATTATAATTCAGATGTGAAGA 59.405 37.037 11.32 2.22 45.96 2.87
1335 1387 4.291249 TCTCCTGGGCTTACAAAAGGTAAT 59.709 41.667 0.00 0.00 41.00 1.89
1342 1394 6.071051 TGGGCTTACAAAAGGTAATCAATTCC 60.071 38.462 0.00 0.00 41.00 3.01
1350 1402 9.634163 ACAAAAGGTAATCAATTCCGTTAATTC 57.366 29.630 0.00 0.00 35.54 2.17
1357 1409 3.445805 TCAATTCCGTTAATTCTTGGGGC 59.554 43.478 0.00 0.00 35.54 5.80
1424 1477 8.469200 CCATTGATTTGATTAGCTGTTTCCTTA 58.531 33.333 0.00 0.00 0.00 2.69
1425 1478 9.294030 CATTGATTTGATTAGCTGTTTCCTTAC 57.706 33.333 0.00 0.00 0.00 2.34
1429 1482 6.801539 TTGATTAGCTGTTTCCTTACACTG 57.198 37.500 0.00 0.00 0.00 3.66
1437 1490 2.163818 TTCCTTACACTGCTTCCGTG 57.836 50.000 0.00 0.00 38.32 4.94
1441 1494 2.673368 CCTTACACTGCTTCCGTGAATC 59.327 50.000 0.00 0.00 36.29 2.52
1448 1501 2.932614 CTGCTTCCGTGAATCGATTCTT 59.067 45.455 32.08 4.48 42.86 2.52
1452 1505 1.066502 TCCGTGAATCGATTCTTGCCA 60.067 47.619 32.08 14.68 42.86 4.92
1453 1506 1.942657 CCGTGAATCGATTCTTGCCAT 59.057 47.619 32.08 0.43 42.86 4.40
1454 1507 2.355756 CCGTGAATCGATTCTTGCCATT 59.644 45.455 32.08 0.57 42.86 3.16
1455 1508 3.559655 CCGTGAATCGATTCTTGCCATTA 59.440 43.478 32.08 12.11 42.86 1.90
1474 1527 6.586082 GCCATTAATTAATAATCGCCTGTTGG 59.414 38.462 10.34 6.12 33.50 3.77
1530 1583 2.434702 GGACCTAATGGACGATGACCTT 59.565 50.000 0.00 0.00 37.04 3.50
1602 1655 3.318922 AACCCCTCCTCCCTCTCCG 62.319 68.421 0.00 0.00 0.00 4.63
1654 1707 0.387878 AGACGAGAAGAAGCTGCACG 60.388 55.000 1.02 0.00 0.00 5.34
1656 1709 1.373497 CGAGAAGAAGCTGCACGGT 60.373 57.895 1.02 0.00 0.00 4.83
1658 1711 1.668919 CGAGAAGAAGCTGCACGGTAA 60.669 52.381 1.02 0.00 0.00 2.85
1798 1851 0.811616 GGCGCATTTCAGGATCGTCT 60.812 55.000 10.83 0.00 0.00 4.18
2137 2203 5.471797 TGAGTGCAGTTTTGGATTCGATTTA 59.528 36.000 0.00 0.00 34.73 1.40
2138 2204 6.016693 TGAGTGCAGTTTTGGATTCGATTTAA 60.017 34.615 0.00 0.00 34.73 1.52
2139 2205 6.149633 AGTGCAGTTTTGGATTCGATTTAAC 58.850 36.000 0.00 0.00 0.00 2.01
2144 2210 7.568679 GCAGTTTTGGATTCGATTTAACCAAAC 60.569 37.037 8.96 5.99 45.86 2.93
2145 2211 6.639279 AGTTTTGGATTCGATTTAACCAAACG 59.361 34.615 8.96 0.00 45.86 3.60
2146 2212 5.943706 TTGGATTCGATTTAACCAAACGA 57.056 34.783 0.00 0.00 37.62 3.85
2147 2213 6.503589 TTGGATTCGATTTAACCAAACGAT 57.496 33.333 0.00 0.00 37.62 3.73
2148 2214 5.874831 TGGATTCGATTTAACCAAACGATG 58.125 37.500 0.00 0.00 31.81 3.84
2150 2216 6.594547 TGGATTCGATTTAACCAAACGATGTA 59.405 34.615 0.00 0.00 31.81 2.29
2151 2217 6.903479 GGATTCGATTTAACCAAACGATGTAC 59.097 38.462 0.00 0.00 31.81 2.90
2152 2218 7.201582 GGATTCGATTTAACCAAACGATGTACT 60.202 37.037 0.00 0.00 31.81 2.73
2154 2220 5.927689 TCGATTTAACCAAACGATGTACTGT 59.072 36.000 0.00 0.00 0.00 3.55
2155 2221 7.089538 TCGATTTAACCAAACGATGTACTGTA 58.910 34.615 0.00 0.00 0.00 2.74
2156 2222 7.062138 TCGATTTAACCAAACGATGTACTGTAC 59.938 37.037 10.98 10.98 0.00 2.90
2157 2223 7.148771 CGATTTAACCAAACGATGTACTGTACA 60.149 37.037 21.68 21.68 43.80 2.90
2158 2224 7.783090 TTTAACCAAACGATGTACTGTACAA 57.217 32.000 23.03 8.38 42.76 2.41
2324 2393 2.025898 GTAAGCGCTACTCCTTCCTCT 58.974 52.381 12.05 0.00 0.00 3.69
2350 2420 1.443322 GGTCGTAGGGTAGACTCGCC 61.443 65.000 0.00 0.00 37.52 5.54
2359 2429 1.240256 GTAGACTCGCCCGATGATCT 58.760 55.000 0.00 0.00 0.00 2.75
2367 2437 1.601663 CGCCCGATGATCTGTTCTCTC 60.602 57.143 0.00 0.00 0.00 3.20
2368 2438 1.601663 GCCCGATGATCTGTTCTCTCG 60.602 57.143 0.00 0.00 33.06 4.04
2369 2439 1.950216 CCCGATGATCTGTTCTCTCGA 59.050 52.381 10.65 0.00 34.29 4.04
2423 2493 1.300697 GGTGCGGTCGTTCTGTCTT 60.301 57.895 0.00 0.00 0.00 3.01
2433 2503 1.177401 GTTCTGTCTTGGATTGGGCC 58.823 55.000 0.00 0.00 0.00 5.80
2434 2504 1.075601 TTCTGTCTTGGATTGGGCCT 58.924 50.000 4.53 0.00 0.00 5.19
2441 2512 2.192175 GGATTGGGCCTGGTACGG 59.808 66.667 4.53 0.00 0.00 4.02
2442 2513 2.676265 GGATTGGGCCTGGTACGGT 61.676 63.158 4.53 0.00 0.00 4.83
2445 2516 0.113580 ATTGGGCCTGGTACGGTTTT 59.886 50.000 4.53 0.00 0.00 2.43
2446 2517 0.106116 TTGGGCCTGGTACGGTTTTT 60.106 50.000 4.53 0.00 0.00 1.94
2447 2518 0.537828 TGGGCCTGGTACGGTTTTTC 60.538 55.000 4.53 0.00 0.00 2.29
2448 2519 0.251033 GGGCCTGGTACGGTTTTTCT 60.251 55.000 0.84 0.00 0.00 2.52
2449 2520 1.612676 GGCCTGGTACGGTTTTTCTT 58.387 50.000 0.00 0.00 0.00 2.52
2450 2521 1.958579 GGCCTGGTACGGTTTTTCTTT 59.041 47.619 0.00 0.00 0.00 2.52
2451 2522 2.363038 GGCCTGGTACGGTTTTTCTTTT 59.637 45.455 0.00 0.00 0.00 2.27
2452 2523 3.181473 GGCCTGGTACGGTTTTTCTTTTT 60.181 43.478 0.00 0.00 0.00 1.94
2453 2524 4.046462 GCCTGGTACGGTTTTTCTTTTTC 58.954 43.478 0.00 0.00 0.00 2.29
2454 2525 4.202080 GCCTGGTACGGTTTTTCTTTTTCT 60.202 41.667 0.00 0.00 0.00 2.52
2455 2526 5.680408 GCCTGGTACGGTTTTTCTTTTTCTT 60.680 40.000 0.00 0.00 0.00 2.52
2456 2527 5.746721 CCTGGTACGGTTTTTCTTTTTCTTG 59.253 40.000 0.00 0.00 0.00 3.02
2457 2528 6.270156 TGGTACGGTTTTTCTTTTTCTTGT 57.730 33.333 0.00 0.00 0.00 3.16
2458 2529 6.094061 TGGTACGGTTTTTCTTTTTCTTGTG 58.906 36.000 0.00 0.00 0.00 3.33
2459 2530 6.072064 TGGTACGGTTTTTCTTTTTCTTGTGA 60.072 34.615 0.00 0.00 0.00 3.58
2460 2531 6.471198 GGTACGGTTTTTCTTTTTCTTGTGAG 59.529 38.462 0.00 0.00 0.00 3.51
2461 2532 6.262193 ACGGTTTTTCTTTTTCTTGTGAGA 57.738 33.333 0.00 0.00 0.00 3.27
2462 2533 6.863275 ACGGTTTTTCTTTTTCTTGTGAGAT 58.137 32.000 0.00 0.00 0.00 2.75
2463 2534 6.751888 ACGGTTTTTCTTTTTCTTGTGAGATG 59.248 34.615 0.00 0.00 0.00 2.90
2464 2535 6.291796 CGGTTTTTCTTTTTCTTGTGAGATGC 60.292 38.462 0.00 0.00 0.00 3.91
2465 2536 6.291796 GGTTTTTCTTTTTCTTGTGAGATGCG 60.292 38.462 0.00 0.00 0.00 4.73
2466 2537 4.488126 TTCTTTTTCTTGTGAGATGCGG 57.512 40.909 0.00 0.00 0.00 5.69
2467 2538 2.813754 TCTTTTTCTTGTGAGATGCGGG 59.186 45.455 0.00 0.00 0.00 6.13
2468 2539 0.881118 TTTTCTTGTGAGATGCGGGC 59.119 50.000 0.00 0.00 0.00 6.13
2469 2540 0.960364 TTTCTTGTGAGATGCGGGCC 60.960 55.000 0.00 0.00 0.00 5.80
2470 2541 1.841302 TTCTTGTGAGATGCGGGCCT 61.841 55.000 0.84 0.00 0.00 5.19
2471 2542 2.046023 TTGTGAGATGCGGGCCTG 60.046 61.111 7.41 7.41 0.00 4.85
2472 2543 3.626996 TTGTGAGATGCGGGCCTGG 62.627 63.158 15.02 1.19 0.00 4.45
2473 2544 4.101448 GTGAGATGCGGGCCTGGT 62.101 66.667 15.02 0.00 0.00 4.00
2474 2545 2.364973 TGAGATGCGGGCCTGGTA 60.365 61.111 15.02 0.00 0.00 3.25
2475 2546 2.109181 GAGATGCGGGCCTGGTAC 59.891 66.667 15.02 0.00 0.00 3.34
2476 2547 3.792053 GAGATGCGGGCCTGGTACG 62.792 68.421 15.02 3.45 0.00 3.67
2477 2548 4.910585 GATGCGGGCCTGGTACGG 62.911 72.222 15.02 4.51 0.00 4.02
2482 2553 4.796495 GGGCCTGGTACGGCTTGG 62.796 72.222 0.84 0.00 44.81 3.61
2483 2554 4.029809 GGCCTGGTACGGCTTGGT 62.030 66.667 11.04 0.00 44.81 3.67
2497 2568 1.676006 GCTTGGTACTTGTGCAGTGTT 59.324 47.619 0.00 0.00 35.97 3.32
2499 2570 1.577468 TGGTACTTGTGCAGTGTTCG 58.423 50.000 0.00 0.00 35.97 3.95
2521 2598 2.819595 CGACGGCCATGACAAGGG 60.820 66.667 2.24 0.00 0.00 3.95
2546 2623 6.544928 AAAAATGAGTGGACTTGGTCTTTT 57.455 33.333 0.00 0.00 32.47 2.27
2547 2624 6.544928 AAAATGAGTGGACTTGGTCTTTTT 57.455 33.333 0.00 0.00 32.47 1.94
2574 2651 8.934023 TTTTGAGAATTATTAGTGGACTTGGT 57.066 30.769 0.00 0.00 0.00 3.67
2575 2652 8.561738 TTTGAGAATTATTAGTGGACTTGGTC 57.438 34.615 0.00 0.00 0.00 4.02
2576 2653 7.252612 TGAGAATTATTAGTGGACTTGGTCA 57.747 36.000 0.14 0.00 33.68 4.02
2613 2690 0.966179 GATTTCGTGTGGGCCCTTTT 59.034 50.000 25.70 0.00 0.00 2.27
2644 2721 1.968017 CCAGCCTCAAAAGCTCGCA 60.968 57.895 0.00 0.00 38.95 5.10
2678 2755 7.408236 CCTAAACGGAACACCTTTCTGGTTTA 61.408 42.308 1.61 7.30 40.80 2.01
2707 2784 1.215647 CCACACACTAGCCCGAGAC 59.784 63.158 0.00 0.00 0.00 3.36
2717 2794 0.832135 AGCCCGAGACAGAGTCCAAA 60.832 55.000 0.00 0.00 32.18 3.28
2718 2795 0.670854 GCCCGAGACAGAGTCCAAAC 60.671 60.000 0.00 0.00 32.18 2.93
2719 2796 0.969894 CCCGAGACAGAGTCCAAACT 59.030 55.000 0.00 0.00 38.88 2.66
2894 3044 8.687824 ATTAATTTTTGAACGCTGATGGTAAG 57.312 30.769 0.00 0.00 0.00 2.34
2944 3125 3.118038 TCTTAACCACTTTCAGGCAGTGT 60.118 43.478 2.54 0.00 40.19 3.55
3024 3205 2.894387 GCGGATGAGGAGCAGCAC 60.894 66.667 0.00 0.00 33.64 4.40
3067 3248 2.580815 CACATGAGGAGCGCCAGA 59.419 61.111 9.88 0.00 36.29 3.86
3118 3299 1.760086 CGGGCTCCTCCTCACTCAT 60.760 63.158 0.00 0.00 34.39 2.90
3137 3318 5.981915 ACTCATTAGTGATGTGATGTGATCG 59.018 40.000 4.18 0.00 37.06 3.69
3145 3326 3.608316 TGTGATGTGATCGATGTTGGA 57.392 42.857 0.54 0.00 0.00 3.53
3154 3335 7.946655 TGTGATCGATGTTGGAAGATATAAC 57.053 36.000 0.54 0.00 0.00 1.89
3200 3382 7.201435 GCGAATGATTTTGGAATTGTTTAGGTC 60.201 37.037 0.00 0.00 0.00 3.85
3319 3502 2.941720 CAAACTAAGCTCATGCCTCTCC 59.058 50.000 0.00 0.00 40.80 3.71
3352 3535 4.069869 CACAGTGGTGGAGCTTGG 57.930 61.111 0.00 0.00 41.45 3.61
3375 3558 3.602483 CAAATTCTTGGAGGGGCAAATG 58.398 45.455 0.00 0.00 0.00 2.32
3377 3560 0.783206 TTCTTGGAGGGGCAAATGGA 59.217 50.000 0.00 0.00 0.00 3.41
3380 3563 0.486879 TTGGAGGGGCAAATGGACTT 59.513 50.000 0.00 0.00 0.00 3.01
3386 3569 1.078347 GGCAAATGGACTTGGGGGA 59.922 57.895 0.00 0.00 0.00 4.81
3466 3649 7.621796 GGATACTCAAAGAAAAACTCCTAGGA 58.378 38.462 11.98 11.98 0.00 2.94
3503 3686 2.054799 AGGTTGACCTTTACTGCTCCA 58.945 47.619 0.00 0.00 46.09 3.86
3508 3691 0.400594 ACCTTTACTGCTCCACCACC 59.599 55.000 0.00 0.00 0.00 4.61
3514 3697 1.153489 CTGCTCCACCACCGATCTG 60.153 63.158 0.00 0.00 0.00 2.90
3539 3722 3.269486 TCGCAAGACTATATCTCGCAC 57.731 47.619 0.00 0.00 45.01 5.34
3540 3723 1.972640 CGCAAGACTATATCTCGCACG 59.027 52.381 0.00 0.00 36.27 5.34
3542 3725 2.974536 GCAAGACTATATCTCGCACGAC 59.025 50.000 0.00 0.00 36.27 4.34
3547 5690 3.468770 ACTATATCTCGCACGACTGTCT 58.531 45.455 6.21 0.00 0.00 3.41
3568 5711 2.579878 TCCGTCTCGCTGAAGGATT 58.420 52.632 8.32 0.00 45.95 3.01
3592 5747 2.238521 CCCCACATGTAGCTGTGTTTT 58.761 47.619 0.00 0.00 44.04 2.43
3595 5750 3.305335 CCCACATGTAGCTGTGTTTTTCC 60.305 47.826 0.00 0.00 44.04 3.13
3596 5751 3.305335 CCACATGTAGCTGTGTTTTTCCC 60.305 47.826 0.00 0.00 44.04 3.97
3624 5779 7.589574 TTTTGTTGCTTAACTGGTTTTCTTC 57.410 32.000 0.00 0.00 0.00 2.87
3625 5780 4.915704 TGTTGCTTAACTGGTTTTCTTCG 58.084 39.130 0.00 0.00 0.00 3.79
3630 5785 6.391537 TGCTTAACTGGTTTTCTTCGTTTTT 58.608 32.000 0.00 0.00 0.00 1.94
3678 5834 9.961264 TGGGTTTTTAGTTTATTTCTTGGTTTT 57.039 25.926 0.00 0.00 0.00 2.43
3712 5868 6.256321 TCTCTTTTTGCAGATGTTTTCTTTGC 59.744 34.615 0.00 0.00 29.93 3.68
3722 5878 7.516312 GCAGATGTTTTCTTTGCTTCTTTCTTG 60.516 37.037 0.00 0.00 29.93 3.02
3741 5897 7.659652 TTCTTGGTTTTCATTTCGTGTTTTT 57.340 28.000 0.00 0.00 0.00 1.94
3742 5898 7.284518 TCTTGGTTTTCATTTCGTGTTTTTC 57.715 32.000 0.00 0.00 0.00 2.29
3743 5899 7.093992 TCTTGGTTTTCATTTCGTGTTTTTCT 58.906 30.769 0.00 0.00 0.00 2.52
3745 5901 7.284518 TGGTTTTCATTTCGTGTTTTTCTTC 57.715 32.000 0.00 0.00 0.00 2.87
3746 5902 6.034044 TGGTTTTCATTTCGTGTTTTTCTTCG 59.966 34.615 0.00 0.00 0.00 3.79
3747 5903 6.399626 GTTTTCATTTCGTGTTTTTCTTCGG 58.600 36.000 0.00 0.00 0.00 4.30
3752 5908 5.748872 TTTCGTGTTTTTCTTCGGTTTTG 57.251 34.783 0.00 0.00 0.00 2.44
3753 5909 4.422546 TCGTGTTTTTCTTCGGTTTTGT 57.577 36.364 0.00 0.00 0.00 2.83
3754 5910 4.796369 TCGTGTTTTTCTTCGGTTTTGTT 58.204 34.783 0.00 0.00 0.00 2.83
3755 5911 4.852650 TCGTGTTTTTCTTCGGTTTTGTTC 59.147 37.500 0.00 0.00 0.00 3.18
3756 5912 4.258704 CGTGTTTTTCTTCGGTTTTGTTCG 60.259 41.667 0.00 0.00 0.00 3.95
3757 5913 3.608939 TGTTTTTCTTCGGTTTTGTTCGC 59.391 39.130 0.00 0.00 0.00 4.70
3763 5927 3.854809 TCTTCGGTTTTGTTCGCTTTTTG 59.145 39.130 0.00 0.00 0.00 2.44
3768 5932 4.376514 CGGTTTTGTTCGCTTTTTGTGTTT 60.377 37.500 0.00 0.00 0.00 2.83
3772 5936 4.181309 TGTTCGCTTTTTGTGTTTCCTT 57.819 36.364 0.00 0.00 0.00 3.36
3784 5948 2.018515 TGTTTCCTTGTCGGGTTTCAC 58.981 47.619 0.00 0.00 0.00 3.18
3892 6059 8.589629 GTTGAACATTCTTCAAATACATGATGC 58.410 33.333 0.00 0.00 39.76 3.91
3893 6060 7.828712 TGAACATTCTTCAAATACATGATGCA 58.171 30.769 0.00 0.00 0.00 3.96
3897 6064 8.905850 ACATTCTTCAAATACATGATGCACATA 58.094 29.630 0.00 0.00 37.46 2.29
3943 6113 9.684448 TGAACGCTTTTTGAATACATGATAAAA 57.316 25.926 0.00 0.00 0.00 1.52
4114 7333 9.433153 TGGTATACACGTAAAACATTGATAACA 57.567 29.630 5.01 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.318441 ACACCATCACCGTGTCAGAG 59.682 55.000 0.00 0.00 40.40 3.35
1 2 0.033366 CACACCATCACCGTGTCAGA 59.967 55.000 0.00 0.00 42.49 3.27
2 3 1.568612 GCACACCATCACCGTGTCAG 61.569 60.000 0.00 0.00 42.49 3.51
3 4 1.596752 GCACACCATCACCGTGTCA 60.597 57.895 0.00 0.00 42.49 3.58
4 5 0.884704 AAGCACACCATCACCGTGTC 60.885 55.000 0.00 0.00 42.49 3.67
5 6 0.884704 GAAGCACACCATCACCGTGT 60.885 55.000 0.00 0.00 45.21 4.49
6 7 0.603707 AGAAGCACACCATCACCGTG 60.604 55.000 0.00 0.00 37.26 4.94
7 8 0.108585 AAGAAGCACACCATCACCGT 59.891 50.000 0.00 0.00 0.00 4.83
8 9 0.518636 CAAGAAGCACACCATCACCG 59.481 55.000 0.00 0.00 0.00 4.94
9 10 0.242017 GCAAGAAGCACACCATCACC 59.758 55.000 0.00 0.00 44.79 4.02
10 11 3.780925 GCAAGAAGCACACCATCAC 57.219 52.632 0.00 0.00 44.79 3.06
20 21 3.118542 CACAAAGACCAAAGCAAGAAGC 58.881 45.455 0.00 0.00 46.19 3.86
21 22 4.376340 ACACAAAGACCAAAGCAAGAAG 57.624 40.909 0.00 0.00 0.00 2.85
22 23 4.021544 ACAACACAAAGACCAAAGCAAGAA 60.022 37.500 0.00 0.00 0.00 2.52
23 24 3.509575 ACAACACAAAGACCAAAGCAAGA 59.490 39.130 0.00 0.00 0.00 3.02
24 25 3.848726 ACAACACAAAGACCAAAGCAAG 58.151 40.909 0.00 0.00 0.00 4.01
25 26 3.951775 ACAACACAAAGACCAAAGCAA 57.048 38.095 0.00 0.00 0.00 3.91
26 27 5.347342 CATTACAACACAAAGACCAAAGCA 58.653 37.500 0.00 0.00 0.00 3.91
27 28 4.744631 CCATTACAACACAAAGACCAAAGC 59.255 41.667 0.00 0.00 0.00 3.51
28 29 5.901552 ACCATTACAACACAAAGACCAAAG 58.098 37.500 0.00 0.00 0.00 2.77
29 30 5.654650 AGACCATTACAACACAAAGACCAAA 59.345 36.000 0.00 0.00 0.00 3.28
30 31 5.197451 AGACCATTACAACACAAAGACCAA 58.803 37.500 0.00 0.00 0.00 3.67
31 32 4.787551 AGACCATTACAACACAAAGACCA 58.212 39.130 0.00 0.00 0.00 4.02
32 33 5.531287 AGAAGACCATTACAACACAAAGACC 59.469 40.000 0.00 0.00 0.00 3.85
33 34 6.619801 AGAAGACCATTACAACACAAAGAC 57.380 37.500 0.00 0.00 0.00 3.01
34 35 7.201785 GGAAAGAAGACCATTACAACACAAAGA 60.202 37.037 0.00 0.00 0.00 2.52
35 36 6.918022 GGAAAGAAGACCATTACAACACAAAG 59.082 38.462 0.00 0.00 0.00 2.77
36 37 6.605594 AGGAAAGAAGACCATTACAACACAAA 59.394 34.615 0.00 0.00 0.00 2.83
37 38 6.126409 AGGAAAGAAGACCATTACAACACAA 58.874 36.000 0.00 0.00 0.00 3.33
38 39 5.690865 AGGAAAGAAGACCATTACAACACA 58.309 37.500 0.00 0.00 0.00 3.72
39 40 5.998363 AGAGGAAAGAAGACCATTACAACAC 59.002 40.000 0.00 0.00 0.00 3.32
40 41 6.043243 AGAGAGGAAAGAAGACCATTACAACA 59.957 38.462 0.00 0.00 0.00 3.33
41 42 6.468543 AGAGAGGAAAGAAGACCATTACAAC 58.531 40.000 0.00 0.00 0.00 3.32
42 43 6.688073 AGAGAGGAAAGAAGACCATTACAA 57.312 37.500 0.00 0.00 0.00 2.41
43 44 6.688073 AAGAGAGGAAAGAAGACCATTACA 57.312 37.500 0.00 0.00 0.00 2.41
44 45 6.937465 ACAAAGAGAGGAAAGAAGACCATTAC 59.063 38.462 0.00 0.00 0.00 1.89
45 46 6.936900 CACAAAGAGAGGAAAGAAGACCATTA 59.063 38.462 0.00 0.00 0.00 1.90
46 47 5.767168 CACAAAGAGAGGAAAGAAGACCATT 59.233 40.000 0.00 0.00 0.00 3.16
47 48 5.072329 TCACAAAGAGAGGAAAGAAGACCAT 59.928 40.000 0.00 0.00 0.00 3.55
48 49 4.408921 TCACAAAGAGAGGAAAGAAGACCA 59.591 41.667 0.00 0.00 0.00 4.02
49 50 4.962155 TCACAAAGAGAGGAAAGAAGACC 58.038 43.478 0.00 0.00 0.00 3.85
50 51 7.330700 CACTATCACAAAGAGAGGAAAGAAGAC 59.669 40.741 0.00 0.00 39.91 3.01
51 52 7.382110 CACTATCACAAAGAGAGGAAAGAAGA 58.618 38.462 0.00 0.00 39.91 2.87
52 53 6.593382 CCACTATCACAAAGAGAGGAAAGAAG 59.407 42.308 0.00 0.00 39.91 2.85
53 54 6.043243 ACCACTATCACAAAGAGAGGAAAGAA 59.957 38.462 0.00 0.00 39.91 2.52
54 55 5.544176 ACCACTATCACAAAGAGAGGAAAGA 59.456 40.000 0.00 0.00 39.91 2.52
55 56 5.641209 CACCACTATCACAAAGAGAGGAAAG 59.359 44.000 0.00 0.00 39.91 2.62
56 57 5.071788 ACACCACTATCACAAAGAGAGGAAA 59.928 40.000 0.00 0.00 39.91 3.13
57 58 4.593206 ACACCACTATCACAAAGAGAGGAA 59.407 41.667 0.00 0.00 39.91 3.36
58 59 4.160329 ACACCACTATCACAAAGAGAGGA 58.840 43.478 0.00 0.00 39.91 3.71
59 60 4.543590 ACACCACTATCACAAAGAGAGG 57.456 45.455 0.00 0.00 39.91 3.69
60 61 4.153117 GCAACACCACTATCACAAAGAGAG 59.847 45.833 0.00 0.00 41.38 3.20
61 62 4.065088 GCAACACCACTATCACAAAGAGA 58.935 43.478 0.00 0.00 0.00 3.10
62 63 3.120546 CGCAACACCACTATCACAAAGAG 60.121 47.826 0.00 0.00 0.00 2.85
63 64 2.805671 CGCAACACCACTATCACAAAGA 59.194 45.455 0.00 0.00 0.00 2.52
64 65 2.805671 TCGCAACACCACTATCACAAAG 59.194 45.455 0.00 0.00 0.00 2.77
65 66 2.839975 TCGCAACACCACTATCACAAA 58.160 42.857 0.00 0.00 0.00 2.83
66 67 2.535012 TCGCAACACCACTATCACAA 57.465 45.000 0.00 0.00 0.00 3.33
67 68 2.139917 GTTCGCAACACCACTATCACA 58.860 47.619 0.00 0.00 0.00 3.58
68 69 2.139917 TGTTCGCAACACCACTATCAC 58.860 47.619 0.00 0.00 36.25 3.06
69 70 2.535012 TGTTCGCAACACCACTATCA 57.465 45.000 0.00 0.00 36.25 2.15
80 81 1.289109 GAGCCGCTAGTTGTTCGCAA 61.289 55.000 0.00 0.00 34.21 4.85
81 82 1.736645 GAGCCGCTAGTTGTTCGCA 60.737 57.895 0.00 0.00 0.00 5.10
82 83 2.453638 GGAGCCGCTAGTTGTTCGC 61.454 63.158 0.00 0.00 0.00 4.70
83 84 0.669318 TTGGAGCCGCTAGTTGTTCG 60.669 55.000 0.00 0.00 0.00 3.95
84 85 0.796927 GTTGGAGCCGCTAGTTGTTC 59.203 55.000 0.00 0.00 0.00 3.18
85 86 0.107831 TGTTGGAGCCGCTAGTTGTT 59.892 50.000 0.00 0.00 0.00 2.83
86 87 0.602905 GTGTTGGAGCCGCTAGTTGT 60.603 55.000 0.00 0.00 0.00 3.32
87 88 1.298859 GGTGTTGGAGCCGCTAGTTG 61.299 60.000 0.00 0.00 0.00 3.16
88 89 1.003718 GGTGTTGGAGCCGCTAGTT 60.004 57.895 0.00 0.00 0.00 2.24
89 90 2.663196 GGTGTTGGAGCCGCTAGT 59.337 61.111 0.00 0.00 0.00 2.57
90 91 2.509336 CGGTGTTGGAGCCGCTAG 60.509 66.667 0.00 0.00 41.53 3.42
91 92 4.077184 CCGGTGTTGGAGCCGCTA 62.077 66.667 0.00 0.00 45.98 4.26
94 95 2.742372 CTTCCGGTGTTGGAGCCG 60.742 66.667 0.00 0.00 46.80 5.52
95 96 2.359975 CCTTCCGGTGTTGGAGCC 60.360 66.667 0.00 0.00 39.72 4.70
96 97 2.180159 TAGCCTTCCGGTGTTGGAGC 62.180 60.000 0.00 0.00 39.72 4.70
97 98 0.108138 CTAGCCTTCCGGTGTTGGAG 60.108 60.000 0.00 0.00 39.72 3.86
98 99 1.980052 CTAGCCTTCCGGTGTTGGA 59.020 57.895 0.00 0.00 35.83 3.53
99 100 1.745489 GCTAGCCTTCCGGTGTTGG 60.745 63.158 2.29 0.58 0.00 3.77
100 101 1.745489 GGCTAGCCTTCCGGTGTTG 60.745 63.158 27.17 0.00 0.00 3.33
101 102 2.669240 GGCTAGCCTTCCGGTGTT 59.331 61.111 27.17 0.00 0.00 3.32
102 103 3.400054 GGGCTAGCCTTCCGGTGT 61.400 66.667 32.18 0.00 36.10 4.16
103 104 2.670148 AAGGGCTAGCCTTCCGGTG 61.670 63.158 32.18 0.00 36.10 4.94
104 105 2.285442 AAGGGCTAGCCTTCCGGT 60.285 61.111 32.18 7.92 36.10 5.28
105 106 2.190578 CAAGGGCTAGCCTTCCGG 59.809 66.667 32.18 14.81 36.10 5.14
106 107 2.190578 CCAAGGGCTAGCCTTCCG 59.809 66.667 32.18 19.21 36.10 4.30
107 108 2.597903 CCCAAGGGCTAGCCTTCC 59.402 66.667 32.18 16.67 36.10 3.46
108 109 2.001269 TCCCCAAGGGCTAGCCTTC 61.001 63.158 32.18 17.43 43.94 3.46
109 110 2.127297 TCCCCAAGGGCTAGCCTT 59.873 61.111 32.18 23.94 43.94 4.35
110 111 2.692741 GTCCCCAAGGGCTAGCCT 60.693 66.667 32.18 16.16 43.94 4.58
117 118 3.661648 CACCCCAGTCCCCAAGGG 61.662 72.222 0.00 0.00 46.11 3.95
118 119 0.623324 TATCACCCCAGTCCCCAAGG 60.623 60.000 0.00 0.00 0.00 3.61
119 120 1.421646 GATATCACCCCAGTCCCCAAG 59.578 57.143 0.00 0.00 0.00 3.61
120 121 1.518367 GATATCACCCCAGTCCCCAA 58.482 55.000 0.00 0.00 0.00 4.12
121 122 0.401395 GGATATCACCCCAGTCCCCA 60.401 60.000 4.83 0.00 0.00 4.96
122 123 1.134438 GGGATATCACCCCAGTCCCC 61.134 65.000 4.83 0.00 43.81 4.81
123 124 2.464582 GGGATATCACCCCAGTCCC 58.535 63.158 4.83 0.00 43.81 4.46
148 149 5.873164 ACAGTCCTATCGTTGTTGGATAAAC 59.127 40.000 0.00 0.00 39.41 2.01
149 150 5.872617 CACAGTCCTATCGTTGTTGGATAAA 59.127 40.000 0.00 0.00 0.00 1.40
150 151 5.416083 CACAGTCCTATCGTTGTTGGATAA 58.584 41.667 0.00 0.00 0.00 1.75
151 152 4.142026 CCACAGTCCTATCGTTGTTGGATA 60.142 45.833 0.00 0.00 0.00 2.59
152 153 3.369471 CCACAGTCCTATCGTTGTTGGAT 60.369 47.826 0.00 0.00 0.00 3.41
153 154 2.028476 CCACAGTCCTATCGTTGTTGGA 60.028 50.000 0.00 0.00 0.00 3.53
154 155 2.289444 ACCACAGTCCTATCGTTGTTGG 60.289 50.000 0.00 0.00 0.00 3.77
155 156 3.040147 ACCACAGTCCTATCGTTGTTG 57.960 47.619 0.00 0.00 0.00 3.33
156 157 4.142004 GGATACCACAGTCCTATCGTTGTT 60.142 45.833 0.00 0.00 0.00 2.83
157 158 3.383825 GGATACCACAGTCCTATCGTTGT 59.616 47.826 0.00 0.00 0.00 3.32
158 159 3.637229 AGGATACCACAGTCCTATCGTTG 59.363 47.826 0.00 0.00 42.93 4.10
159 160 3.912248 AGGATACCACAGTCCTATCGTT 58.088 45.455 0.00 0.00 42.93 3.85
160 161 3.596940 AGGATACCACAGTCCTATCGT 57.403 47.619 0.00 0.00 42.93 3.73
161 162 4.262079 GGAAAGGATACCACAGTCCTATCG 60.262 50.000 0.00 0.00 43.94 2.92
162 163 4.040584 GGGAAAGGATACCACAGTCCTATC 59.959 50.000 0.00 0.00 43.94 2.08
163 164 3.974642 GGGAAAGGATACCACAGTCCTAT 59.025 47.826 0.00 0.00 43.94 2.57
164 165 3.381335 GGGAAAGGATACCACAGTCCTA 58.619 50.000 0.00 0.00 43.94 2.94
165 166 2.197465 GGGAAAGGATACCACAGTCCT 58.803 52.381 0.00 0.00 46.63 3.85
166 167 1.212195 GGGGAAAGGATACCACAGTCC 59.788 57.143 0.00 0.00 34.64 3.85
167 168 2.170817 GAGGGGAAAGGATACCACAGTC 59.829 54.545 0.00 0.00 31.04 3.51
168 169 2.197465 GAGGGGAAAGGATACCACAGT 58.803 52.381 0.00 0.00 31.04 3.55
169 170 2.482494 AGAGGGGAAAGGATACCACAG 58.518 52.381 0.00 0.00 31.04 3.66
170 171 2.576191 CAAGAGGGGAAAGGATACCACA 59.424 50.000 0.00 0.00 31.04 4.17
171 172 2.092375 CCAAGAGGGGAAAGGATACCAC 60.092 54.545 0.00 0.00 37.17 4.16
172 173 2.205342 CCAAGAGGGGAAAGGATACCA 58.795 52.381 0.00 0.00 37.17 3.25
185 186 1.185618 TCACGGAGACACCCAAGAGG 61.186 60.000 0.00 0.00 43.78 3.69
186 187 0.898320 ATCACGGAGACACCCAAGAG 59.102 55.000 0.00 0.00 34.64 2.85
187 188 0.608130 CATCACGGAGACACCCAAGA 59.392 55.000 0.00 0.00 34.64 3.02
188 189 0.321671 ACATCACGGAGACACCCAAG 59.678 55.000 0.00 0.00 34.64 3.61
189 190 0.034756 CACATCACGGAGACACCCAA 59.965 55.000 0.00 0.00 34.64 4.12
190 191 0.830023 TCACATCACGGAGACACCCA 60.830 55.000 0.00 0.00 34.64 4.51
191 192 0.389948 GTCACATCACGGAGACACCC 60.390 60.000 0.00 0.00 34.64 4.61
192 193 0.389948 GGTCACATCACGGAGACACC 60.390 60.000 0.00 0.00 32.79 4.16
193 194 0.317160 TGGTCACATCACGGAGACAC 59.683 55.000 0.00 0.00 32.79 3.67
194 195 0.317160 GTGGTCACATCACGGAGACA 59.683 55.000 0.00 0.00 32.79 3.41
195 196 0.603569 AGTGGTCACATCACGGAGAC 59.396 55.000 3.82 0.00 39.86 3.36
196 197 2.209690 TAGTGGTCACATCACGGAGA 57.790 50.000 3.82 0.00 39.86 3.71
197 198 2.427095 TGATAGTGGTCACATCACGGAG 59.573 50.000 3.82 0.00 39.86 4.63
198 199 2.452505 TGATAGTGGTCACATCACGGA 58.547 47.619 3.82 0.00 39.86 4.69
199 200 2.959507 TGATAGTGGTCACATCACGG 57.040 50.000 3.82 0.00 39.86 4.94
200 201 3.126073 CCATGATAGTGGTCACATCACG 58.874 50.000 13.92 9.04 39.86 4.35
201 202 2.874701 GCCATGATAGTGGTCACATCAC 59.125 50.000 13.92 0.00 41.47 3.06
202 203 2.158769 GGCCATGATAGTGGTCACATCA 60.159 50.000 0.00 13.97 43.43 3.07
203 204 2.158769 TGGCCATGATAGTGGTCACATC 60.159 50.000 0.00 5.52 46.33 3.06
204 205 1.845791 TGGCCATGATAGTGGTCACAT 59.154 47.619 0.00 0.00 46.33 3.21
205 206 1.284313 TGGCCATGATAGTGGTCACA 58.716 50.000 0.00 0.00 46.33 3.58
208 209 2.684881 CAACTTGGCCATGATAGTGGTC 59.315 50.000 24.48 0.00 44.23 4.02
209 210 2.621407 CCAACTTGGCCATGATAGTGGT 60.621 50.000 24.48 0.00 41.47 4.16
210 211 2.026641 CCAACTTGGCCATGATAGTGG 58.973 52.381 24.48 19.03 42.35 4.00
222 223 2.971307 ACAAAACTTGTGCCAACTTGG 58.029 42.857 3.10 3.10 43.48 3.61
223 224 5.063312 CCTAAACAAAACTTGTGCCAACTTG 59.937 40.000 0.00 0.00 44.59 3.16
224 225 5.046950 TCCTAAACAAAACTTGTGCCAACTT 60.047 36.000 0.00 0.00 44.59 2.66
225 226 4.464597 TCCTAAACAAAACTTGTGCCAACT 59.535 37.500 0.00 0.00 44.59 3.16
226 227 4.749976 TCCTAAACAAAACTTGTGCCAAC 58.250 39.130 0.00 0.00 44.59 3.77
227 228 4.707448 TCTCCTAAACAAAACTTGTGCCAA 59.293 37.500 0.00 0.00 44.59 4.52
228 229 4.274147 TCTCCTAAACAAAACTTGTGCCA 58.726 39.130 0.00 0.00 44.59 4.92
229 230 4.911514 TCTCCTAAACAAAACTTGTGCC 57.088 40.909 0.00 0.00 44.59 5.01
230 231 5.221244 ACCATCTCCTAAACAAAACTTGTGC 60.221 40.000 0.00 0.00 44.59 4.57
231 232 6.391227 ACCATCTCCTAAACAAAACTTGTG 57.609 37.500 0.00 0.00 44.59 3.33
233 234 7.038154 TGAACCATCTCCTAAACAAAACTTG 57.962 36.000 0.00 0.00 0.00 3.16
234 235 6.239036 GCTGAACCATCTCCTAAACAAAACTT 60.239 38.462 0.00 0.00 0.00 2.66
235 236 5.241728 GCTGAACCATCTCCTAAACAAAACT 59.758 40.000 0.00 0.00 0.00 2.66
236 237 5.241728 AGCTGAACCATCTCCTAAACAAAAC 59.758 40.000 0.00 0.00 0.00 2.43
237 238 5.385198 AGCTGAACCATCTCCTAAACAAAA 58.615 37.500 0.00 0.00 0.00 2.44
238 239 4.985538 AGCTGAACCATCTCCTAAACAAA 58.014 39.130 0.00 0.00 0.00 2.83
239 240 4.287067 AGAGCTGAACCATCTCCTAAACAA 59.713 41.667 0.00 0.00 28.09 2.83
240 241 3.840666 AGAGCTGAACCATCTCCTAAACA 59.159 43.478 0.00 0.00 28.09 2.83
241 242 4.479786 AGAGCTGAACCATCTCCTAAAC 57.520 45.455 0.00 0.00 28.09 2.01
242 243 5.958380 TCTTAGAGCTGAACCATCTCCTAAA 59.042 40.000 0.00 0.00 28.09 1.85
243 244 5.519808 TCTTAGAGCTGAACCATCTCCTAA 58.480 41.667 0.00 0.00 28.09 2.69
244 245 5.130705 TCTTAGAGCTGAACCATCTCCTA 57.869 43.478 0.00 0.00 28.09 2.94
245 246 3.987745 TCTTAGAGCTGAACCATCTCCT 58.012 45.455 0.00 0.00 28.09 3.69
246 247 4.100808 ACATCTTAGAGCTGAACCATCTCC 59.899 45.833 0.00 0.00 28.09 3.71
247 248 5.275067 ACATCTTAGAGCTGAACCATCTC 57.725 43.478 0.00 0.00 0.00 2.75
248 249 5.690464 AACATCTTAGAGCTGAACCATCT 57.310 39.130 0.00 0.00 0.00 2.90
249 250 5.877012 TCAAACATCTTAGAGCTGAACCATC 59.123 40.000 0.00 0.00 0.00 3.51
250 251 5.809001 TCAAACATCTTAGAGCTGAACCAT 58.191 37.500 0.00 0.00 0.00 3.55
251 252 5.227569 TCAAACATCTTAGAGCTGAACCA 57.772 39.130 0.00 0.00 0.00 3.67
252 253 6.112058 AGATCAAACATCTTAGAGCTGAACC 58.888 40.000 0.00 0.00 0.00 3.62
253 254 7.761704 TGTAGATCAAACATCTTAGAGCTGAAC 59.238 37.037 0.00 0.00 0.00 3.18
254 255 7.840931 TGTAGATCAAACATCTTAGAGCTGAA 58.159 34.615 0.00 0.00 0.00 3.02
255 256 7.410120 TGTAGATCAAACATCTTAGAGCTGA 57.590 36.000 0.00 0.00 0.00 4.26
256 257 9.755804 TTATGTAGATCAAACATCTTAGAGCTG 57.244 33.333 14.83 0.00 38.49 4.24
257 258 9.979578 CTTATGTAGATCAAACATCTTAGAGCT 57.020 33.333 14.83 0.00 38.49 4.09
258 259 9.202273 CCTTATGTAGATCAAACATCTTAGAGC 57.798 37.037 14.83 0.00 38.49 4.09
259 260 9.202273 GCCTTATGTAGATCAAACATCTTAGAG 57.798 37.037 14.83 8.29 38.49 2.43
260 261 8.928448 AGCCTTATGTAGATCAAACATCTTAGA 58.072 33.333 14.83 0.00 38.49 2.10
261 262 9.553064 AAGCCTTATGTAGATCAAACATCTTAG 57.447 33.333 14.83 11.38 38.49 2.18
262 263 9.547753 GAAGCCTTATGTAGATCAAACATCTTA 57.452 33.333 14.83 4.56 38.49 2.10
263 264 8.270744 AGAAGCCTTATGTAGATCAAACATCTT 58.729 33.333 14.83 12.23 38.49 2.40
264 265 7.800092 AGAAGCCTTATGTAGATCAAACATCT 58.200 34.615 14.83 5.90 38.49 2.90
265 266 9.717942 ATAGAAGCCTTATGTAGATCAAACATC 57.282 33.333 14.83 4.08 38.49 3.06
275 276 9.703892 GCCATCATATATAGAAGCCTTATGTAG 57.296 37.037 0.00 0.00 0.00 2.74
276 277 9.212593 TGCCATCATATATAGAAGCCTTATGTA 57.787 33.333 0.00 0.00 0.00 2.29
277 278 8.094284 TGCCATCATATATAGAAGCCTTATGT 57.906 34.615 0.00 0.00 0.00 2.29
278 279 8.834465 GTTGCCATCATATATAGAAGCCTTATG 58.166 37.037 0.00 0.00 0.00 1.90
279 280 8.776119 AGTTGCCATCATATATAGAAGCCTTAT 58.224 33.333 0.00 0.00 0.00 1.73
280 281 8.150827 AGTTGCCATCATATATAGAAGCCTTA 57.849 34.615 0.00 0.00 0.00 2.69
281 282 7.025520 AGTTGCCATCATATATAGAAGCCTT 57.974 36.000 0.00 0.00 0.00 4.35
282 283 6.633325 AGTTGCCATCATATATAGAAGCCT 57.367 37.500 0.00 0.00 0.00 4.58
283 284 7.108847 AGAAGTTGCCATCATATATAGAAGCC 58.891 38.462 0.00 0.00 0.00 4.35
284 285 8.558973 AAGAAGTTGCCATCATATATAGAAGC 57.441 34.615 0.00 0.00 0.00 3.86
285 286 9.941325 AGAAGAAGTTGCCATCATATATAGAAG 57.059 33.333 0.00 0.00 0.00 2.85
286 287 9.935241 GAGAAGAAGTTGCCATCATATATAGAA 57.065 33.333 0.00 0.00 0.00 2.10
287 288 9.319060 AGAGAAGAAGTTGCCATCATATATAGA 57.681 33.333 0.00 0.00 0.00 1.98
291 292 9.770097 CTTTAGAGAAGAAGTTGCCATCATATA 57.230 33.333 0.00 0.00 0.00 0.86
292 293 7.228308 GCTTTAGAGAAGAAGTTGCCATCATAT 59.772 37.037 0.00 0.00 0.00 1.78
293 294 6.540189 GCTTTAGAGAAGAAGTTGCCATCATA 59.460 38.462 0.00 0.00 0.00 2.15
294 295 5.356470 GCTTTAGAGAAGAAGTTGCCATCAT 59.644 40.000 0.00 0.00 0.00 2.45
295 296 4.697352 GCTTTAGAGAAGAAGTTGCCATCA 59.303 41.667 0.00 0.00 0.00 3.07
296 297 4.201763 CGCTTTAGAGAAGAAGTTGCCATC 60.202 45.833 0.00 0.00 0.00 3.51
297 298 3.686726 CGCTTTAGAGAAGAAGTTGCCAT 59.313 43.478 0.00 0.00 0.00 4.40
298 299 3.067106 CGCTTTAGAGAAGAAGTTGCCA 58.933 45.455 0.00 0.00 0.00 4.92
299 300 3.067833 ACGCTTTAGAGAAGAAGTTGCC 58.932 45.455 0.00 0.00 0.00 4.52
300 301 3.181539 CGACGCTTTAGAGAAGAAGTTGC 60.182 47.826 0.00 0.00 0.00 4.17
301 302 3.365220 CCGACGCTTTAGAGAAGAAGTTG 59.635 47.826 0.00 0.00 0.00 3.16
302 303 3.005578 ACCGACGCTTTAGAGAAGAAGTT 59.994 43.478 0.00 0.00 0.00 2.66
303 304 2.557490 ACCGACGCTTTAGAGAAGAAGT 59.443 45.455 0.00 0.00 0.00 3.01
304 305 3.172824 GACCGACGCTTTAGAGAAGAAG 58.827 50.000 0.00 0.00 0.00 2.85
305 306 2.094854 GGACCGACGCTTTAGAGAAGAA 60.095 50.000 0.00 0.00 0.00 2.52
306 307 1.471684 GGACCGACGCTTTAGAGAAGA 59.528 52.381 0.00 0.00 0.00 2.87
307 308 1.201647 TGGACCGACGCTTTAGAGAAG 59.798 52.381 0.00 0.00 0.00 2.85
308 309 1.201647 CTGGACCGACGCTTTAGAGAA 59.798 52.381 0.00 0.00 0.00 2.87
309 310 0.809385 CTGGACCGACGCTTTAGAGA 59.191 55.000 0.00 0.00 0.00 3.10
310 311 0.802607 GCTGGACCGACGCTTTAGAG 60.803 60.000 0.00 0.00 0.00 2.43
311 312 1.214589 GCTGGACCGACGCTTTAGA 59.785 57.895 0.00 0.00 0.00 2.10
312 313 1.078759 CAGCTGGACCGACGCTTTAG 61.079 60.000 5.57 0.00 0.00 1.85
313 314 1.080093 CAGCTGGACCGACGCTTTA 60.080 57.895 5.57 0.00 0.00 1.85
314 315 2.357517 CAGCTGGACCGACGCTTT 60.358 61.111 5.57 0.00 0.00 3.51
315 316 4.379243 CCAGCTGGACCGACGCTT 62.379 66.667 29.88 0.00 37.39 4.68
324 325 1.990060 GTGCTAGGGTCCAGCTGGA 60.990 63.158 32.00 32.00 43.08 3.86
325 326 2.586792 GTGCTAGGGTCCAGCTGG 59.413 66.667 27.87 27.87 39.83 4.85
326 327 2.185350 CGTGCTAGGGTCCAGCTG 59.815 66.667 6.78 6.78 39.83 4.24
327 328 2.037367 TCGTGCTAGGGTCCAGCT 59.963 61.111 3.08 0.00 39.83 4.24
328 329 2.184579 GTCGTGCTAGGGTCCAGC 59.815 66.667 0.00 0.00 39.56 4.85
329 330 2.044555 TCGTCGTGCTAGGGTCCAG 61.045 63.158 0.00 0.00 0.00 3.86
330 331 2.034532 TCGTCGTGCTAGGGTCCA 59.965 61.111 0.00 0.00 0.00 4.02
331 332 1.593296 AAGTCGTCGTGCTAGGGTCC 61.593 60.000 0.00 0.00 0.00 4.46
332 333 0.179169 GAAGTCGTCGTGCTAGGGTC 60.179 60.000 0.00 0.00 0.00 4.46
333 334 1.593296 GGAAGTCGTCGTGCTAGGGT 61.593 60.000 0.00 0.00 0.00 4.34
334 335 1.139095 GGAAGTCGTCGTGCTAGGG 59.861 63.158 0.00 0.00 0.00 3.53
335 336 1.139095 GGGAAGTCGTCGTGCTAGG 59.861 63.158 0.00 0.00 0.00 3.02
336 337 1.226323 CGGGAAGTCGTCGTGCTAG 60.226 63.158 0.00 0.00 0.00 3.42
337 338 1.672030 TCGGGAAGTCGTCGTGCTA 60.672 57.895 0.00 0.00 0.00 3.49
338 339 2.981909 TCGGGAAGTCGTCGTGCT 60.982 61.111 0.00 0.00 0.00 4.40
339 340 2.804090 GTCGGGAAGTCGTCGTGC 60.804 66.667 0.00 0.00 0.00 5.34
340 341 2.126580 GGTCGGGAAGTCGTCGTG 60.127 66.667 0.00 0.00 0.00 4.35
341 342 3.730761 CGGTCGGGAAGTCGTCGT 61.731 66.667 0.00 0.00 0.00 4.34
343 344 3.352338 ATGCGGTCGGGAAGTCGTC 62.352 63.158 0.00 0.00 0.00 4.20
344 345 3.379445 ATGCGGTCGGGAAGTCGT 61.379 61.111 0.00 0.00 0.00 4.34
345 346 2.885644 CATGCGGTCGGGAAGTCG 60.886 66.667 0.00 0.00 0.00 4.18
346 347 2.511600 CCATGCGGTCGGGAAGTC 60.512 66.667 0.00 0.00 0.00 3.01
347 348 3.319198 ACCATGCGGTCGGGAAGT 61.319 61.111 0.00 0.00 44.71 3.01
348 349 2.819595 CACCATGCGGTCGGGAAG 60.820 66.667 0.00 0.00 44.71 3.46
352 353 3.133464 ATTGCACCATGCGGTCGG 61.133 61.111 0.00 0.00 44.71 4.79
353 354 2.100797 CATTGCACCATGCGGTCG 59.899 61.111 0.00 0.00 44.71 4.79
354 355 1.137404 GACATTGCACCATGCGGTC 59.863 57.895 0.00 0.99 44.71 4.79
358 359 1.153706 GGCTGACATTGCACCATGC 60.154 57.895 0.00 0.00 45.29 4.06
359 360 0.172578 CAGGCTGACATTGCACCATG 59.827 55.000 9.42 0.00 0.00 3.66
360 361 0.968901 CCAGGCTGACATTGCACCAT 60.969 55.000 17.94 0.00 0.00 3.55
361 362 1.604308 CCAGGCTGACATTGCACCA 60.604 57.895 17.94 0.00 0.00 4.17
362 363 2.998279 GCCAGGCTGACATTGCACC 61.998 63.158 17.94 0.00 0.00 5.01
363 364 1.530013 AAGCCAGGCTGACATTGCAC 61.530 55.000 17.05 0.00 39.62 4.57
364 365 1.228644 AAGCCAGGCTGACATTGCA 60.229 52.632 17.05 0.00 39.62 4.08
365 366 1.509923 GAAGCCAGGCTGACATTGC 59.490 57.895 17.05 10.47 39.62 3.56
366 367 0.957395 ACGAAGCCAGGCTGACATTG 60.957 55.000 17.05 5.55 39.62 2.82
367 368 0.957395 CACGAAGCCAGGCTGACATT 60.957 55.000 17.05 7.31 39.62 2.71
368 369 1.376424 CACGAAGCCAGGCTGACAT 60.376 57.895 17.05 0.00 39.62 3.06
369 370 2.031012 CACGAAGCCAGGCTGACA 59.969 61.111 17.05 0.00 39.62 3.58
370 371 1.294659 CTTCACGAAGCCAGGCTGAC 61.295 60.000 17.05 11.76 39.62 3.51
371 372 1.004560 CTTCACGAAGCCAGGCTGA 60.005 57.895 17.05 5.76 39.62 4.26
372 373 3.571119 CTTCACGAAGCCAGGCTG 58.429 61.111 17.05 7.75 39.62 4.85
380 381 3.951979 ACAAACTCAAGCTTCACGAAG 57.048 42.857 0.00 2.29 41.24 3.79
381 382 4.411327 CAAACAAACTCAAGCTTCACGAA 58.589 39.130 0.00 0.00 0.00 3.85
382 383 3.730662 GCAAACAAACTCAAGCTTCACGA 60.731 43.478 0.00 0.00 0.00 4.35
383 384 2.531508 GCAAACAAACTCAAGCTTCACG 59.468 45.455 0.00 0.00 0.00 4.35
384 385 3.774066 AGCAAACAAACTCAAGCTTCAC 58.226 40.909 0.00 0.00 0.00 3.18
385 386 4.454728 AAGCAAACAAACTCAAGCTTCA 57.545 36.364 0.00 0.00 37.77 3.02
387 388 3.734902 CGGAAGCAAACAAACTCAAGCTT 60.735 43.478 0.00 0.00 44.15 3.74
388 389 2.223572 CGGAAGCAAACAAACTCAAGCT 60.224 45.455 0.00 0.00 0.00 3.74
389 390 2.119457 CGGAAGCAAACAAACTCAAGC 58.881 47.619 0.00 0.00 0.00 4.01
390 391 3.108144 CACGGAAGCAAACAAACTCAAG 58.892 45.455 0.00 0.00 0.00 3.02
391 392 2.750166 TCACGGAAGCAAACAAACTCAA 59.250 40.909 0.00 0.00 0.00 3.02
392 393 2.360844 TCACGGAAGCAAACAAACTCA 58.639 42.857 0.00 0.00 0.00 3.41
393 394 3.626028 ATCACGGAAGCAAACAAACTC 57.374 42.857 0.00 0.00 0.00 3.01
394 395 4.261447 GGTTATCACGGAAGCAAACAAACT 60.261 41.667 0.00 0.00 0.00 2.66
395 396 3.978855 GGTTATCACGGAAGCAAACAAAC 59.021 43.478 0.00 0.00 0.00 2.93
396 397 3.886505 AGGTTATCACGGAAGCAAACAAA 59.113 39.130 0.00 0.00 0.00 2.83
397 398 3.482436 AGGTTATCACGGAAGCAAACAA 58.518 40.909 0.00 0.00 0.00 2.83
398 399 3.134574 AGGTTATCACGGAAGCAAACA 57.865 42.857 0.00 0.00 0.00 2.83
399 400 5.813080 ATTAGGTTATCACGGAAGCAAAC 57.187 39.130 0.00 0.00 0.00 2.93
400 401 5.708230 ACAATTAGGTTATCACGGAAGCAAA 59.292 36.000 0.00 0.00 0.00 3.68
401 402 5.250200 ACAATTAGGTTATCACGGAAGCAA 58.750 37.500 0.00 0.00 0.00 3.91
402 403 4.839121 ACAATTAGGTTATCACGGAAGCA 58.161 39.130 0.00 0.00 0.00 3.91
403 404 6.913873 TTACAATTAGGTTATCACGGAAGC 57.086 37.500 0.00 0.00 0.00 3.86
404 405 9.716507 CAAATTACAATTAGGTTATCACGGAAG 57.283 33.333 0.00 0.00 0.00 3.46
405 406 8.185505 GCAAATTACAATTAGGTTATCACGGAA 58.814 33.333 0.00 0.00 0.00 4.30
406 407 7.554835 AGCAAATTACAATTAGGTTATCACGGA 59.445 33.333 0.00 0.00 0.00 4.69
407 408 7.703328 AGCAAATTACAATTAGGTTATCACGG 58.297 34.615 0.00 0.00 0.00 4.94
408 409 9.009327 CAAGCAAATTACAATTAGGTTATCACG 57.991 33.333 0.00 0.00 0.00 4.35
409 410 9.855021 ACAAGCAAATTACAATTAGGTTATCAC 57.145 29.630 0.00 0.00 0.00 3.06
414 415 9.830975 AGAAAACAAGCAAATTACAATTAGGTT 57.169 25.926 0.00 0.00 0.00 3.50
415 416 9.830975 AAGAAAACAAGCAAATTACAATTAGGT 57.169 25.926 0.00 0.00 0.00 3.08
501 502 3.454082 TGTCCTTGCATTTCTGGGTTTTT 59.546 39.130 0.00 0.00 0.00 1.94
502 503 3.037549 TGTCCTTGCATTTCTGGGTTTT 58.962 40.909 0.00 0.00 0.00 2.43
503 504 2.676748 TGTCCTTGCATTTCTGGGTTT 58.323 42.857 0.00 0.00 0.00 3.27
504 505 2.380064 TGTCCTTGCATTTCTGGGTT 57.620 45.000 0.00 0.00 0.00 4.11
505 506 2.158475 TCTTGTCCTTGCATTTCTGGGT 60.158 45.455 0.00 0.00 0.00 4.51
506 507 2.229784 GTCTTGTCCTTGCATTTCTGGG 59.770 50.000 0.00 0.00 0.00 4.45
507 508 2.095567 CGTCTTGTCCTTGCATTTCTGG 60.096 50.000 0.00 0.00 0.00 3.86
508 509 2.095567 CCGTCTTGTCCTTGCATTTCTG 60.096 50.000 0.00 0.00 0.00 3.02
509 510 2.154462 CCGTCTTGTCCTTGCATTTCT 58.846 47.619 0.00 0.00 0.00 2.52
510 511 2.151202 TCCGTCTTGTCCTTGCATTTC 58.849 47.619 0.00 0.00 0.00 2.17
511 512 2.154462 CTCCGTCTTGTCCTTGCATTT 58.846 47.619 0.00 0.00 0.00 2.32
512 513 1.072331 ACTCCGTCTTGTCCTTGCATT 59.928 47.619 0.00 0.00 0.00 3.56
513 514 0.687354 ACTCCGTCTTGTCCTTGCAT 59.313 50.000 0.00 0.00 0.00 3.96
562 563 8.999431 CCGTGCTACATTCCTAAAATAATGTAT 58.001 33.333 8.00 0.00 43.78 2.29
565 566 7.226720 AGACCGTGCTACATTCCTAAAATAATG 59.773 37.037 0.00 0.00 38.71 1.90
566 567 7.280356 AGACCGTGCTACATTCCTAAAATAAT 58.720 34.615 0.00 0.00 0.00 1.28
567 568 6.646267 AGACCGTGCTACATTCCTAAAATAA 58.354 36.000 0.00 0.00 0.00 1.40
570 571 4.546829 AGACCGTGCTACATTCCTAAAA 57.453 40.909 0.00 0.00 0.00 1.52
571 572 4.020928 TCAAGACCGTGCTACATTCCTAAA 60.021 41.667 0.00 0.00 0.00 1.85
573 574 3.093814 TCAAGACCGTGCTACATTCCTA 58.906 45.455 0.00 0.00 0.00 2.94
582 583 1.961277 CGCCTTTCAAGACCGTGCT 60.961 57.895 0.00 0.00 0.00 4.40
596 597 4.322049 CGTTATGGAGAGGAATAATCGCCT 60.322 45.833 0.00 0.00 37.51 5.52
666 667 1.944177 TATATGGAGGAGAGGCTGGC 58.056 55.000 0.00 0.00 0.00 4.85
667 668 5.723887 AGTATTTATATGGAGGAGAGGCTGG 59.276 44.000 0.00 0.00 0.00 4.85
669 670 5.723887 CCAGTATTTATATGGAGGAGAGGCT 59.276 44.000 0.00 0.00 36.09 4.58
670 671 5.485708 ACCAGTATTTATATGGAGGAGAGGC 59.514 44.000 0.00 0.00 37.54 4.70
671 672 7.560796 AACCAGTATTTATATGGAGGAGAGG 57.439 40.000 0.00 0.00 37.54 3.69
672 673 9.930693 GTAAACCAGTATTTATATGGAGGAGAG 57.069 37.037 0.00 0.00 37.54 3.20
673 674 8.877195 GGTAAACCAGTATTTATATGGAGGAGA 58.123 37.037 0.00 0.00 37.54 3.71
675 676 7.017850 GGGGTAAACCAGTATTTATATGGAGGA 59.982 40.741 0.81 0.00 42.91 3.71
676 677 7.173032 GGGGTAAACCAGTATTTATATGGAGG 58.827 42.308 0.81 0.00 42.91 4.30
692 705 0.328926 TGGTTCGGATGGGGTAAACC 59.671 55.000 0.00 0.00 39.84 3.27
697 710 2.908015 CGATGGTTCGGATGGGGT 59.092 61.111 0.00 0.00 41.74 4.95
704 717 0.249322 AGAATACGGCGATGGTTCGG 60.249 55.000 16.62 0.00 45.59 4.30
706 719 3.678548 GGATTAGAATACGGCGATGGTTC 59.321 47.826 16.62 11.65 0.00 3.62
709 722 3.313012 TGGATTAGAATACGGCGATGG 57.687 47.619 16.62 0.00 0.00 3.51
710 723 4.330074 GGAATGGATTAGAATACGGCGATG 59.670 45.833 16.62 0.00 0.00 3.84
711 724 4.223032 AGGAATGGATTAGAATACGGCGAT 59.777 41.667 16.62 0.00 0.00 4.58
712 725 3.576982 AGGAATGGATTAGAATACGGCGA 59.423 43.478 16.62 0.00 0.00 5.54
713 726 3.926616 AGGAATGGATTAGAATACGGCG 58.073 45.455 4.80 4.80 0.00 6.46
714 727 3.927142 CGAGGAATGGATTAGAATACGGC 59.073 47.826 0.00 0.00 0.00 5.68
715 728 4.021368 ACCGAGGAATGGATTAGAATACGG 60.021 45.833 0.00 0.00 40.94 4.02
716 729 5.135508 ACCGAGGAATGGATTAGAATACG 57.864 43.478 0.00 0.00 0.00 3.06
717 730 5.162075 CGACCGAGGAATGGATTAGAATAC 58.838 45.833 0.00 0.00 0.00 1.89
718 731 4.321750 GCGACCGAGGAATGGATTAGAATA 60.322 45.833 0.00 0.00 0.00 1.75
719 732 3.555168 GCGACCGAGGAATGGATTAGAAT 60.555 47.826 0.00 0.00 0.00 2.40
720 733 2.223971 GCGACCGAGGAATGGATTAGAA 60.224 50.000 0.00 0.00 0.00 2.10
721 734 1.340248 GCGACCGAGGAATGGATTAGA 59.660 52.381 0.00 0.00 0.00 2.10
722 735 1.068588 TGCGACCGAGGAATGGATTAG 59.931 52.381 0.00 0.00 0.00 1.73
723 736 1.116308 TGCGACCGAGGAATGGATTA 58.884 50.000 0.00 0.00 0.00 1.75
724 737 0.251916 TTGCGACCGAGGAATGGATT 59.748 50.000 0.00 0.00 0.00 3.01
725 738 0.462047 GTTGCGACCGAGGAATGGAT 60.462 55.000 0.00 0.00 0.00 3.41
726 739 1.079405 GTTGCGACCGAGGAATGGA 60.079 57.895 0.00 0.00 0.00 3.41
727 740 1.361668 CTGTTGCGACCGAGGAATGG 61.362 60.000 0.45 0.00 0.00 3.16
728 741 0.389817 TCTGTTGCGACCGAGGAATG 60.390 55.000 0.45 0.00 0.00 2.67
729 742 0.537188 ATCTGTTGCGACCGAGGAAT 59.463 50.000 0.45 0.00 0.00 3.01
730 743 0.320374 AATCTGTTGCGACCGAGGAA 59.680 50.000 0.45 0.00 0.00 3.36
738 751 0.672401 GGTTCGGGAATCTGTTGCGA 60.672 55.000 0.00 0.00 0.00 5.10
742 755 4.635699 AGTTTAGGTTCGGGAATCTGTT 57.364 40.909 4.47 0.00 33.15 3.16
744 757 6.163135 AGATAGTTTAGGTTCGGGAATCTG 57.837 41.667 4.47 0.00 33.15 2.90
767 780 2.097066 AGGCCTGACTCCTGAGGTA 58.903 57.895 3.11 0.00 31.53 3.08
782 804 1.587613 GACTGATCGAGTCGCAGGC 60.588 63.158 19.86 15.33 41.91 4.85
794 816 0.549950 CAAGATGGCCCCTGACTGAT 59.450 55.000 0.00 0.00 0.00 2.90
800 822 2.123982 GGCTCAAGATGGCCCCTG 60.124 66.667 0.00 0.00 42.30 4.45
806 828 0.524862 GCTTGTGTGGCTCAAGATGG 59.475 55.000 16.87 0.00 43.17 3.51
812 852 0.761187 AGAGAAGCTTGTGTGGCTCA 59.239 50.000 2.10 0.00 39.30 4.26
822 862 4.249661 GGTTCGAGAATCAAGAGAAGCTT 58.750 43.478 0.00 0.00 36.67 3.74
930 979 5.907197 GCTACAGCTGCGATCTATTTAAA 57.093 39.130 15.27 0.00 38.21 1.52
1095 1144 2.531942 AAGAGGTGGGGGTGGTCC 60.532 66.667 0.00 0.00 0.00 4.46
1188 1237 3.345737 TCGATGCATCTGTCGAACC 57.654 52.632 23.73 0.00 43.14 3.62
1194 1243 3.567164 GGAAAATGGATCGATGCATCTGT 59.433 43.478 29.36 18.41 37.91 3.41
1210 1259 1.134946 GCCGTTAGCTGCATGGAAAAT 59.865 47.619 9.66 0.00 38.99 1.82
1215 1264 0.248743 CATTGCCGTTAGCTGCATGG 60.249 55.000 1.02 0.00 44.23 3.66
1269 1321 2.363147 GACCTCCGAGAGCCACCT 60.363 66.667 0.00 0.00 0.00 4.00
1335 1387 3.445805 GCCCCAAGAATTAACGGAATTGA 59.554 43.478 2.62 0.00 37.90 2.57
1342 1394 0.523966 TTGCGCCCCAAGAATTAACG 59.476 50.000 4.18 0.00 0.00 3.18
1350 1402 0.101759 CAGAATGATTGCGCCCCAAG 59.898 55.000 4.18 0.00 39.69 3.61
1424 1477 0.317160 TCGATTCACGGAAGCAGTGT 59.683 50.000 0.00 0.00 42.82 3.55
1425 1478 1.645034 ATCGATTCACGGAAGCAGTG 58.355 50.000 0.00 0.00 42.82 3.66
1429 1482 2.537730 GCAAGAATCGATTCACGGAAGC 60.538 50.000 33.42 23.32 42.82 3.86
1441 1494 8.788813 GCGATTATTAATTAATGGCAAGAATCG 58.211 33.333 27.68 27.68 45.90 3.34
1452 1505 8.567948 CACTCCAACAGGCGATTATTAATTAAT 58.432 33.333 14.86 14.86 33.06 1.40
1453 1506 7.468084 GCACTCCAACAGGCGATTATTAATTAA 60.468 37.037 0.00 0.00 0.00 1.40
1454 1507 6.017440 GCACTCCAACAGGCGATTATTAATTA 60.017 38.462 0.00 0.00 0.00 1.40
1455 1508 5.221048 GCACTCCAACAGGCGATTATTAATT 60.221 40.000 0.00 0.00 0.00 1.40
1474 1527 1.443802 GCCTTGTACTTCCTGCACTC 58.556 55.000 0.00 0.00 0.00 3.51
1530 1583 0.753848 TGTCGGAGATGGGCGTGATA 60.754 55.000 0.00 0.00 40.67 2.15
1610 1663 3.953444 GAAGAAGGCTTTGGCGCGC 62.953 63.158 25.94 25.94 39.81 6.86
1654 1707 0.178301 CGGCCCTTCTCTTCCTTACC 59.822 60.000 0.00 0.00 0.00 2.85
1656 1709 0.042131 TCCGGCCCTTCTCTTCCTTA 59.958 55.000 0.00 0.00 0.00 2.69
1658 1711 1.229529 TTCCGGCCCTTCTCTTCCT 60.230 57.895 0.00 0.00 0.00 3.36
1848 1901 2.879070 CTGATCGATGGCTGCACGC 61.879 63.158 0.54 0.11 38.13 5.34
2046 2102 2.033755 CCACTCCTCGTCGTCGTCT 61.034 63.158 1.33 0.00 38.33 4.18
2137 2203 6.870971 AATTGTACAGTACATCGTTTGGTT 57.129 33.333 14.34 0.00 38.68 3.67
2138 2204 6.870971 AAATTGTACAGTACATCGTTTGGT 57.129 33.333 14.34 0.00 38.68 3.67
2139 2205 7.136119 ACAAAATTGTACAGTACATCGTTTGG 58.864 34.615 27.58 21.34 40.16 3.28
2144 2210 8.705134 TCAGTAACAAAATTGTACAGTACATCG 58.295 33.333 14.34 4.44 41.31 3.84
2150 2216 8.567948 CCAGAATCAGTAACAAAATTGTACAGT 58.432 33.333 0.00 0.00 41.31 3.55
2151 2217 8.783093 TCCAGAATCAGTAACAAAATTGTACAG 58.217 33.333 0.00 0.00 41.31 2.74
2152 2218 8.564574 GTCCAGAATCAGTAACAAAATTGTACA 58.435 33.333 0.00 0.00 41.31 2.90
2154 2220 7.442969 ACGTCCAGAATCAGTAACAAAATTGTA 59.557 33.333 0.00 0.00 41.31 2.41
2155 2221 6.262273 ACGTCCAGAATCAGTAACAAAATTGT 59.738 34.615 0.00 0.00 44.72 2.71
2156 2222 6.668323 ACGTCCAGAATCAGTAACAAAATTG 58.332 36.000 0.00 0.00 0.00 2.32
2157 2223 6.877611 ACGTCCAGAATCAGTAACAAAATT 57.122 33.333 0.00 0.00 0.00 1.82
2158 2224 6.293955 CCAACGTCCAGAATCAGTAACAAAAT 60.294 38.462 0.00 0.00 0.00 1.82
2312 2378 2.176889 CCAACGGAAGAGGAAGGAGTA 58.823 52.381 0.00 0.00 32.90 2.59
2350 2420 2.601029 CGTCGAGAGAACAGATCATCGG 60.601 54.545 0.00 0.00 45.01 4.18
2359 2429 0.873054 GGTCAGTCGTCGAGAGAACA 59.127 55.000 0.00 0.00 45.01 3.18
2423 2493 2.675242 CCGTACCAGGCCCAATCCA 61.675 63.158 0.00 0.00 0.00 3.41
2433 2503 6.252655 CACAAGAAAAAGAAAAACCGTACCAG 59.747 38.462 0.00 0.00 0.00 4.00
2434 2504 6.072064 TCACAAGAAAAAGAAAAACCGTACCA 60.072 34.615 0.00 0.00 0.00 3.25
2441 2512 6.291796 CCGCATCTCACAAGAAAAAGAAAAAC 60.292 38.462 0.00 0.00 34.49 2.43
2442 2513 5.748152 CCGCATCTCACAAGAAAAAGAAAAA 59.252 36.000 0.00 0.00 34.49 1.94
2445 2516 3.253188 CCCGCATCTCACAAGAAAAAGAA 59.747 43.478 0.00 0.00 34.49 2.52
2446 2517 2.813754 CCCGCATCTCACAAGAAAAAGA 59.186 45.455 0.00 0.00 34.49 2.52
2447 2518 2.669391 GCCCGCATCTCACAAGAAAAAG 60.669 50.000 0.00 0.00 34.49 2.27
2448 2519 1.269448 GCCCGCATCTCACAAGAAAAA 59.731 47.619 0.00 0.00 34.49 1.94
2449 2520 0.881118 GCCCGCATCTCACAAGAAAA 59.119 50.000 0.00 0.00 34.49 2.29
2450 2521 0.960364 GGCCCGCATCTCACAAGAAA 60.960 55.000 0.00 0.00 34.49 2.52
2451 2522 1.377202 GGCCCGCATCTCACAAGAA 60.377 57.895 0.00 0.00 34.49 2.52
2452 2523 2.268920 GGCCCGCATCTCACAAGA 59.731 61.111 0.00 0.00 35.54 3.02
2453 2524 2.110967 CAGGCCCGCATCTCACAAG 61.111 63.158 0.00 0.00 0.00 3.16
2454 2525 2.046023 CAGGCCCGCATCTCACAA 60.046 61.111 0.00 0.00 0.00 3.33
2455 2526 4.100084 CCAGGCCCGCATCTCACA 62.100 66.667 0.00 0.00 0.00 3.58
2456 2527 2.731571 TACCAGGCCCGCATCTCAC 61.732 63.158 0.00 0.00 0.00 3.51
2457 2528 2.364973 TACCAGGCCCGCATCTCA 60.365 61.111 0.00 0.00 0.00 3.27
2458 2529 2.109181 GTACCAGGCCCGCATCTC 59.891 66.667 0.00 0.00 0.00 2.75
2459 2530 3.849951 CGTACCAGGCCCGCATCT 61.850 66.667 0.00 0.00 0.00 2.90
2460 2531 4.910585 CCGTACCAGGCCCGCATC 62.911 72.222 0.00 0.00 0.00 3.91
2468 2539 0.611714 AAGTACCAAGCCGTACCAGG 59.388 55.000 3.43 0.00 39.60 4.45
2469 2540 1.001633 ACAAGTACCAAGCCGTACCAG 59.998 52.381 3.43 0.50 39.60 4.00
2470 2541 1.050204 ACAAGTACCAAGCCGTACCA 58.950 50.000 3.43 0.00 39.60 3.25
2471 2542 1.435577 CACAAGTACCAAGCCGTACC 58.564 55.000 3.43 0.00 39.60 3.34
2472 2543 0.794473 GCACAAGTACCAAGCCGTAC 59.206 55.000 0.00 0.00 39.15 3.67
2473 2544 0.393448 TGCACAAGTACCAAGCCGTA 59.607 50.000 0.00 0.00 0.00 4.02
2474 2545 0.884704 CTGCACAAGTACCAAGCCGT 60.885 55.000 0.00 0.00 0.00 5.68
2475 2546 0.884704 ACTGCACAAGTACCAAGCCG 60.885 55.000 0.00 0.00 37.36 5.52
2476 2547 0.593128 CACTGCACAAGTACCAAGCC 59.407 55.000 0.00 0.00 36.83 4.35
2477 2548 1.308998 ACACTGCACAAGTACCAAGC 58.691 50.000 0.00 0.00 36.83 4.01
2478 2549 2.032894 CGAACACTGCACAAGTACCAAG 60.033 50.000 0.00 0.00 36.83 3.61
2479 2550 1.937223 CGAACACTGCACAAGTACCAA 59.063 47.619 0.00 0.00 36.83 3.67
2480 2551 1.577468 CGAACACTGCACAAGTACCA 58.423 50.000 0.00 0.00 36.83 3.25
2481 2552 0.234884 GCGAACACTGCACAAGTACC 59.765 55.000 0.00 0.00 36.83 3.34
2482 2553 0.234884 GGCGAACACTGCACAAGTAC 59.765 55.000 0.00 0.00 36.83 2.73
2483 2554 0.105964 AGGCGAACACTGCACAAGTA 59.894 50.000 0.00 0.00 36.83 2.24
2548 2625 9.362151 ACCAAGTCCACTAATAATTCTCAAAAA 57.638 29.630 0.00 0.00 0.00 1.94
2549 2626 8.934023 ACCAAGTCCACTAATAATTCTCAAAA 57.066 30.769 0.00 0.00 0.00 2.44
2550 2627 8.160765 TGACCAAGTCCACTAATAATTCTCAAA 58.839 33.333 0.00 0.00 0.00 2.69
2551 2628 7.685481 TGACCAAGTCCACTAATAATTCTCAA 58.315 34.615 0.00 0.00 0.00 3.02
2552 2629 7.252612 TGACCAAGTCCACTAATAATTCTCA 57.747 36.000 0.00 0.00 0.00 3.27
2553 2630 8.738645 AATGACCAAGTCCACTAATAATTCTC 57.261 34.615 0.00 0.00 0.00 2.87
2556 2633 9.408648 CCTTAATGACCAAGTCCACTAATAATT 57.591 33.333 0.00 0.00 0.00 1.40
2557 2634 8.557450 ACCTTAATGACCAAGTCCACTAATAAT 58.443 33.333 0.00 0.00 0.00 1.28
2558 2635 7.924541 ACCTTAATGACCAAGTCCACTAATAA 58.075 34.615 0.00 0.00 0.00 1.40
2559 2636 7.504926 ACCTTAATGACCAAGTCCACTAATA 57.495 36.000 0.00 0.00 0.00 0.98
2560 2637 6.388619 ACCTTAATGACCAAGTCCACTAAT 57.611 37.500 0.00 0.00 0.00 1.73
2561 2638 5.836024 ACCTTAATGACCAAGTCCACTAA 57.164 39.130 0.00 0.00 0.00 2.24
2562 2639 5.836024 AACCTTAATGACCAAGTCCACTA 57.164 39.130 0.00 0.00 0.00 2.74
2563 2640 4.724279 AACCTTAATGACCAAGTCCACT 57.276 40.909 0.00 0.00 0.00 4.00
2564 2641 4.395231 GCTAACCTTAATGACCAAGTCCAC 59.605 45.833 0.00 0.00 0.00 4.02
2565 2642 4.566907 GGCTAACCTTAATGACCAAGTCCA 60.567 45.833 0.00 0.00 0.00 4.02
2566 2643 3.945921 GGCTAACCTTAATGACCAAGTCC 59.054 47.826 0.00 0.00 0.00 3.85
2567 2644 3.945921 GGGCTAACCTTAATGACCAAGTC 59.054 47.826 0.00 0.00 35.85 3.01
2568 2645 3.621461 CGGGCTAACCTTAATGACCAAGT 60.621 47.826 0.00 0.00 36.97 3.16
2569 2646 2.943033 CGGGCTAACCTTAATGACCAAG 59.057 50.000 0.00 0.00 36.97 3.61
2570 2647 2.306512 ACGGGCTAACCTTAATGACCAA 59.693 45.455 0.00 0.00 36.97 3.67
2571 2648 1.910671 ACGGGCTAACCTTAATGACCA 59.089 47.619 0.00 0.00 36.97 4.02
2572 2649 2.558378 GACGGGCTAACCTTAATGACC 58.442 52.381 0.00 0.00 36.97 4.02
2573 2650 2.199236 CGACGGGCTAACCTTAATGAC 58.801 52.381 0.00 0.00 36.97 3.06
2574 2651 1.137479 CCGACGGGCTAACCTTAATGA 59.863 52.381 5.81 0.00 36.97 2.57
2575 2652 1.137479 TCCGACGGGCTAACCTTAATG 59.863 52.381 15.25 0.00 36.97 1.90
2576 2653 1.488390 TCCGACGGGCTAACCTTAAT 58.512 50.000 15.25 0.00 36.97 1.40
2613 2690 2.436109 GCTGGCCCAAGAAGGACA 59.564 61.111 0.00 0.00 45.16 4.02
2644 2721 3.036091 TGTTCCGTTTAGGCCTAGCTAT 58.964 45.455 13.36 0.00 40.77 2.97
2678 2755 2.529136 TGTGTGGCCAGCCTACCT 60.529 61.111 5.11 0.00 36.94 3.08
2707 2784 6.010294 TCGAAGTTAGTAGTTTGGACTCTG 57.990 41.667 0.00 0.00 37.33 3.35
2717 2794 3.572584 CACGCCTTTCGAAGTTAGTAGT 58.427 45.455 0.00 0.00 41.67 2.73
2718 2795 2.921754 CCACGCCTTTCGAAGTTAGTAG 59.078 50.000 0.00 0.00 41.67 2.57
2719 2796 2.297033 ACCACGCCTTTCGAAGTTAGTA 59.703 45.455 0.00 0.00 41.67 1.82
2894 3044 1.885163 CGTGGTCAGTACCCCCAGTC 61.885 65.000 0.00 0.00 46.16 3.51
2914 3095 4.130857 TGAAAGTGGTTAAGATCGTTGCA 58.869 39.130 0.00 0.00 0.00 4.08
2944 3125 1.374947 CGGCTTGAACTCCTTCCCA 59.625 57.895 0.00 0.00 0.00 4.37
3067 3248 1.298667 CGGGGAGGAATTGTCGGTT 59.701 57.895 0.00 0.00 0.00 4.44
3094 3275 4.095400 AGGAGGAGCCCGGTGGAT 62.095 66.667 0.00 0.00 37.37 3.41
3118 3299 5.906073 ACATCGATCACATCACATCACTAA 58.094 37.500 0.00 0.00 0.00 2.24
3154 3335 3.306973 CGCACACACCTACATATTCACAG 59.693 47.826 0.00 0.00 0.00 3.66
3171 3352 4.880759 ACAATTCCAAAATCATTCGCACA 58.119 34.783 0.00 0.00 0.00 4.57
3200 3382 4.392619 TCAAACTGTTGTATAAACGCCG 57.607 40.909 0.00 0.00 36.07 6.46
3243 3426 4.582869 ACATTGCACTCACACACATAGAT 58.417 39.130 0.00 0.00 0.00 1.98
3319 3502 4.217550 CCACTGTGTTAAATGGTTGTAGGG 59.782 45.833 7.08 0.00 0.00 3.53
3377 3560 2.364579 TATCGCCGTCCCCCAAGT 60.365 61.111 0.00 0.00 0.00 3.16
3386 3569 1.299541 CCAAATCTTGCTATCGCCGT 58.700 50.000 0.00 0.00 34.43 5.68
3402 3585 9.391006 CTATGTAACTAGTGAAAATTAGCCCAA 57.609 33.333 0.00 0.00 0.00 4.12
3503 3686 0.460284 GCGATTGTCAGATCGGTGGT 60.460 55.000 14.82 0.00 46.70 4.16
3508 3691 7.836797 AGATATAGTCTTGCGATTGTCAGATCG 60.837 40.741 10.96 10.96 42.08 3.69
3514 3697 5.983790 CGAGATATAGTCTTGCGATTGTC 57.016 43.478 0.00 0.00 37.29 3.18
3539 3722 0.095589 CGAGACGGAAGAGACAGTCG 59.904 60.000 0.00 0.00 39.28 4.18
3540 3723 0.179184 GCGAGACGGAAGAGACAGTC 60.179 60.000 0.00 0.00 35.78 3.51
3542 3725 0.179176 CAGCGAGACGGAAGAGACAG 60.179 60.000 0.00 0.00 0.00 3.51
3576 5719 3.832527 AGGGAAAAACACAGCTACATGT 58.167 40.909 2.69 2.69 0.00 3.21
3579 5734 5.669164 AAAAAGGGAAAAACACAGCTACA 57.331 34.783 0.00 0.00 0.00 2.74
3603 5758 4.396790 ACGAAGAAAACCAGTTAAGCAACA 59.603 37.500 0.00 0.00 37.10 3.33
3604 5759 4.916870 ACGAAGAAAACCAGTTAAGCAAC 58.083 39.130 0.00 0.00 34.67 4.17
3605 5760 5.570234 AACGAAGAAAACCAGTTAAGCAA 57.430 34.783 0.00 0.00 0.00 3.91
3606 5761 5.570234 AAACGAAGAAAACCAGTTAAGCA 57.430 34.783 0.00 0.00 0.00 3.91
3607 5762 6.880822 AAAAACGAAGAAAACCAGTTAAGC 57.119 33.333 0.00 0.00 0.00 3.09
3651 5806 9.607988 AAACCAAGAAATAAACTAAAAACCCAG 57.392 29.630 0.00 0.00 0.00 4.45
3688 5844 6.257193 AGCAAAGAAAACATCTGCAAAAAGAG 59.743 34.615 0.00 0.00 38.79 2.85
3689 5845 6.108015 AGCAAAGAAAACATCTGCAAAAAGA 58.892 32.000 0.00 0.00 38.79 2.52
3690 5846 6.354039 AGCAAAGAAAACATCTGCAAAAAG 57.646 33.333 0.00 0.00 38.79 2.27
3696 5852 5.981915 AGAAAGAAGCAAAGAAAACATCTGC 59.018 36.000 0.00 0.00 38.79 4.26
3697 5853 7.042925 CCAAGAAAGAAGCAAAGAAAACATCTG 60.043 37.037 0.00 0.00 38.79 2.90
3698 5854 6.982724 CCAAGAAAGAAGCAAAGAAAACATCT 59.017 34.615 0.00 0.00 41.32 2.90
3699 5855 6.758416 ACCAAGAAAGAAGCAAAGAAAACATC 59.242 34.615 0.00 0.00 0.00 3.06
3700 5856 6.643388 ACCAAGAAAGAAGCAAAGAAAACAT 58.357 32.000 0.00 0.00 0.00 2.71
3701 5857 6.036577 ACCAAGAAAGAAGCAAAGAAAACA 57.963 33.333 0.00 0.00 0.00 2.83
3707 5863 7.543947 AATGAAAACCAAGAAAGAAGCAAAG 57.456 32.000 0.00 0.00 0.00 2.77
3712 5868 6.751888 ACACGAAATGAAAACCAAGAAAGAAG 59.248 34.615 0.00 0.00 0.00 2.85
3722 5878 6.399626 CGAAGAAAAACACGAAATGAAAACC 58.600 36.000 0.00 0.00 0.00 3.27
3741 5897 3.768468 AAAAGCGAACAAAACCGAAGA 57.232 38.095 0.00 0.00 0.00 2.87
3742 5898 3.610677 ACAAAAAGCGAACAAAACCGAAG 59.389 39.130 0.00 0.00 0.00 3.79
3743 5899 3.365220 CACAAAAAGCGAACAAAACCGAA 59.635 39.130 0.00 0.00 0.00 4.30
3745 5901 2.664085 ACACAAAAAGCGAACAAAACCG 59.336 40.909 0.00 0.00 0.00 4.44
3746 5902 4.655440 AACACAAAAAGCGAACAAAACC 57.345 36.364 0.00 0.00 0.00 3.27
3747 5903 5.076765 GGAAACACAAAAAGCGAACAAAAC 58.923 37.500 0.00 0.00 0.00 2.43
3752 5908 3.924073 ACAAGGAAACACAAAAAGCGAAC 59.076 39.130 0.00 0.00 0.00 3.95
3753 5909 4.170256 GACAAGGAAACACAAAAAGCGAA 58.830 39.130 0.00 0.00 0.00 4.70
3754 5910 3.729462 CGACAAGGAAACACAAAAAGCGA 60.729 43.478 0.00 0.00 0.00 4.93
3755 5911 2.529894 CGACAAGGAAACACAAAAAGCG 59.470 45.455 0.00 0.00 0.00 4.68
3756 5912 2.857748 CCGACAAGGAAACACAAAAAGC 59.142 45.455 0.00 0.00 45.00 3.51
3757 5913 3.119280 ACCCGACAAGGAAACACAAAAAG 60.119 43.478 0.00 0.00 45.00 2.27
3763 5927 2.018515 TGAAACCCGACAAGGAAACAC 58.981 47.619 0.00 0.00 45.00 3.32
3768 5932 0.107831 CCAGTGAAACCCGACAAGGA 59.892 55.000 0.00 0.00 45.00 3.36
3772 5936 2.131776 AAAACCAGTGAAACCCGACA 57.868 45.000 0.00 0.00 37.80 4.35
3897 6064 8.921670 GCGTTCAAACCATGTATTAAAAGAAAT 58.078 29.630 0.00 0.00 0.00 2.17
3900 6067 7.209471 AGCGTTCAAACCATGTATTAAAAGA 57.791 32.000 0.00 0.00 0.00 2.52
3914 6081 7.388290 TCATGTATTCAAAAAGCGTTCAAAC 57.612 32.000 0.00 0.00 0.00 2.93
3943 6113 7.712204 ACGGGGACTTATGTATTTGATTTTT 57.288 32.000 0.00 0.00 0.00 1.94
3947 6117 7.394923 TGAAAAACGGGGACTTATGTATTTGAT 59.605 33.333 0.00 0.00 0.00 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.