Multiple sequence alignment - TraesCS3D01G275100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G275100 chr3D 100.000 3735 0 0 1 3735 381634198 381630464 0.000000e+00 6898
1 TraesCS3D01G275100 chr3B 92.658 1362 67 10 1348 2696 497096128 497094787 0.000000e+00 1930
2 TraesCS3D01G275100 chr3B 94.820 888 28 9 2855 3735 497093602 497092726 0.000000e+00 1369
3 TraesCS3D01G275100 chr3B 75.534 609 98 31 291 876 775364370 775363790 6.190000e-63 252
4 TraesCS3D01G275100 chr3B 92.308 156 7 2 1049 1199 497096755 497096600 2.260000e-52 217
5 TraesCS3D01G275100 chr3B 94.891 137 5 2 1209 1344 497096336 497096201 2.920000e-51 213
6 TraesCS3D01G275100 chr3B 78.746 287 40 8 602 873 132898228 132897948 4.960000e-39 172
7 TraesCS3D01G275100 chr3B 81.818 198 20 9 1 182 497104900 497104703 6.460000e-33 152
8 TraesCS3D01G275100 chr3B 92.157 102 5 3 952 1050 132957493 132957392 1.400000e-29 141
9 TraesCS3D01G275100 chr3A 90.309 1455 101 10 1396 2843 504805305 504803884 0.000000e+00 1869
10 TraesCS3D01G275100 chr3A 93.805 904 43 7 2842 3735 504803802 504802902 0.000000e+00 1347
11 TraesCS3D01G275100 chr3A 79.842 253 21 14 1072 1313 504805701 504805468 1.390000e-34 158
12 TraesCS3D01G275100 chr2D 80.349 631 107 14 252 871 520585737 520585113 2.630000e-126 462
13 TraesCS3D01G275100 chr2D 77.147 652 111 24 252 873 30677331 30677974 9.930000e-91 344
14 TraesCS3D01G275100 chr5A 79.388 621 95 16 280 876 311914131 311913520 1.250000e-109 407
15 TraesCS3D01G275100 chr5A 77.728 449 92 7 291 732 663734370 663733923 6.150000e-68 268
16 TraesCS3D01G275100 chr1D 83.059 425 66 5 317 735 441094608 441094184 7.570000e-102 381
17 TraesCS3D01G275100 chr1D 79.223 515 81 13 386 878 25717847 25718357 5.980000e-88 335
18 TraesCS3D01G275100 chr1D 75.626 599 122 10 280 859 166877292 166876699 3.670000e-70 276
19 TraesCS3D01G275100 chr1D 94.845 97 3 2 948 1042 439017389 439017485 2.320000e-32 150
20 TraesCS3D01G275100 chr1D 93.269 104 2 3 949 1048 15320802 15320700 8.360000e-32 148
21 TraesCS3D01G275100 chr1D 82.639 144 19 5 731 873 412751618 412751480 5.070000e-24 122
22 TraesCS3D01G275100 chr1D 82.639 144 19 5 731 873 412768118 412767980 5.070000e-24 122
23 TraesCS3D01G275100 chr2A 77.937 630 109 17 250 859 617430064 617429445 2.120000e-97 366
24 TraesCS3D01G275100 chr2A 93.878 98 4 2 952 1047 757957695 757957792 3.010000e-31 147
25 TraesCS3D01G275100 chrUn 84.196 367 49 7 252 611 17042505 17042869 7.680000e-92 348
26 TraesCS3D01G275100 chr7A 78.221 551 92 17 280 807 128785895 128785350 1.000000e-85 327
27 TraesCS3D01G275100 chr7A 78.761 226 28 12 673 881 6157844 6157622 2.340000e-27 134
28 TraesCS3D01G275100 chr5D 75.904 581 109 17 317 873 528905406 528905979 6.150000e-68 268
29 TraesCS3D01G275100 chr7D 75.081 618 103 20 280 872 627586897 627587488 1.340000e-59 241
30 TraesCS3D01G275100 chr6D 92.593 108 5 3 942 1048 118813182 118813077 6.460000e-33 152
31 TraesCS3D01G275100 chr5B 96.703 91 2 1 952 1042 529995005 529995094 2.320000e-32 150
32 TraesCS3D01G275100 chr6B 93.684 95 4 1 952 1044 578075236 578075330 1.400000e-29 141
33 TraesCS3D01G275100 chr6B 96.250 80 2 1 952 1031 585904307 585904229 3.030000e-26 130
34 TraesCS3D01G275100 chr2B 92.708 96 4 3 952 1045 770767711 770767805 6.510000e-28 135
35 TraesCS3D01G275100 chr1B 74.780 341 66 6 550 873 556299871 556299534 6.510000e-28 135


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G275100 chr3D 381630464 381634198 3734 True 6898.000000 6898 100.000000 1 3735 1 chr3D.!!$R1 3734
1 TraesCS3D01G275100 chr3B 497092726 497096755 4029 True 932.250000 1930 93.669250 1049 3735 4 chr3B.!!$R5 2686
2 TraesCS3D01G275100 chr3B 775363790 775364370 580 True 252.000000 252 75.534000 291 876 1 chr3B.!!$R4 585
3 TraesCS3D01G275100 chr3A 504802902 504805701 2799 True 1124.666667 1869 87.985333 1072 3735 3 chr3A.!!$R1 2663
4 TraesCS3D01G275100 chr2D 520585113 520585737 624 True 462.000000 462 80.349000 252 871 1 chr2D.!!$R1 619
5 TraesCS3D01G275100 chr2D 30677331 30677974 643 False 344.000000 344 77.147000 252 873 1 chr2D.!!$F1 621
6 TraesCS3D01G275100 chr5A 311913520 311914131 611 True 407.000000 407 79.388000 280 876 1 chr5A.!!$R1 596
7 TraesCS3D01G275100 chr1D 25717847 25718357 510 False 335.000000 335 79.223000 386 878 1 chr1D.!!$F1 492
8 TraesCS3D01G275100 chr1D 166876699 166877292 593 True 276.000000 276 75.626000 280 859 1 chr1D.!!$R2 579
9 TraesCS3D01G275100 chr2A 617429445 617430064 619 True 366.000000 366 77.937000 250 859 1 chr2A.!!$R1 609
10 TraesCS3D01G275100 chr7A 128785350 128785895 545 True 327.000000 327 78.221000 280 807 1 chr7A.!!$R2 527
11 TraesCS3D01G275100 chr5D 528905406 528905979 573 False 268.000000 268 75.904000 317 873 1 chr5D.!!$F1 556
12 TraesCS3D01G275100 chr7D 627586897 627587488 591 False 241.000000 241 75.081000 280 872 1 chr7D.!!$F1 592

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
68 69 0.036388 ACCAATACAGCACCTCACGG 60.036 55.0 0.00 0.00 0.00 4.94 F
84 85 0.108585 ACGGACTGAGTTGCCAACAT 59.891 50.0 10.69 0.00 0.00 2.71 F
198 199 0.387367 CTGCTCGTGCGTACTCAACT 60.387 55.0 4.84 0.00 43.34 3.16 F
1328 1648 0.037447 ACAAGGGAAGAGCTCAAGCC 59.963 55.0 17.77 13.33 43.38 4.35 F
2185 2640 0.390860 ATCACTATCAGCCAGGACGC 59.609 55.0 0.00 0.00 0.00 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1013 1057 0.178992 CAGGGGAGGCAAGTTTGTGA 60.179 55.0 0.00 0.00 0.0 3.58 R
1014 1058 0.178992 TCAGGGGAGGCAAGTTTGTG 60.179 55.0 0.00 0.00 0.0 3.33 R
1857 2309 0.392193 CACCACAGCTCCTCACCATC 60.392 60.0 0.00 0.00 0.0 3.51 R
2455 2914 0.100682 GCATACGTGGAGAGCGAAGA 59.899 55.0 0.00 0.00 0.0 2.87 R
3677 5185 0.609957 CTTCCATGGCAACTGCTGGA 60.610 55.0 6.96 8.24 41.7 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.382852 AACTGAGCTATCCCCGCT 57.617 55.556 0.00 0.00 41.15 5.52
18 19 1.826024 AACTGAGCTATCCCCGCTG 59.174 57.895 0.00 0.00 37.96 5.18
19 20 0.978146 AACTGAGCTATCCCCGCTGT 60.978 55.000 0.00 0.00 37.96 4.40
20 21 0.978146 ACTGAGCTATCCCCGCTGTT 60.978 55.000 0.00 0.00 37.96 3.16
21 22 0.531532 CTGAGCTATCCCCGCTGTTG 60.532 60.000 0.00 0.00 37.96 3.33
22 23 0.975556 TGAGCTATCCCCGCTGTTGA 60.976 55.000 0.00 0.00 37.96 3.18
23 24 0.394565 GAGCTATCCCCGCTGTTGAT 59.605 55.000 0.00 0.00 37.96 2.57
24 25 0.107456 AGCTATCCCCGCTGTTGATG 59.893 55.000 0.00 0.00 36.15 3.07
25 26 1.510480 GCTATCCCCGCTGTTGATGC 61.510 60.000 0.00 0.00 0.00 3.91
26 27 0.886490 CTATCCCCGCTGTTGATGCC 60.886 60.000 0.00 0.00 0.00 4.40
27 28 1.344953 TATCCCCGCTGTTGATGCCT 61.345 55.000 0.00 0.00 0.00 4.75
28 29 2.615227 ATCCCCGCTGTTGATGCCTC 62.615 60.000 0.00 0.00 0.00 4.70
29 30 2.270205 CCCGCTGTTGATGCCTCT 59.730 61.111 0.00 0.00 0.00 3.69
30 31 2.110967 CCCGCTGTTGATGCCTCTG 61.111 63.158 0.00 0.00 0.00 3.35
31 32 1.376424 CCGCTGTTGATGCCTCTGT 60.376 57.895 0.00 0.00 0.00 3.41
32 33 0.957395 CCGCTGTTGATGCCTCTGTT 60.957 55.000 0.00 0.00 0.00 3.16
33 34 0.445436 CGCTGTTGATGCCTCTGTTC 59.555 55.000 0.00 0.00 0.00 3.18
34 35 1.527034 GCTGTTGATGCCTCTGTTCA 58.473 50.000 0.00 0.00 0.00 3.18
35 36 1.881973 GCTGTTGATGCCTCTGTTCAA 59.118 47.619 0.00 0.00 0.00 2.69
36 37 2.294233 GCTGTTGATGCCTCTGTTCAAA 59.706 45.455 0.00 0.00 31.66 2.69
37 38 3.854784 GCTGTTGATGCCTCTGTTCAAAC 60.855 47.826 0.00 0.00 31.66 2.93
38 39 3.286353 TGTTGATGCCTCTGTTCAAACA 58.714 40.909 0.00 0.00 37.37 2.83
39 40 3.698539 TGTTGATGCCTCTGTTCAAACAA 59.301 39.130 0.00 0.00 38.66 2.83
40 41 4.202040 TGTTGATGCCTCTGTTCAAACAAG 60.202 41.667 0.00 0.00 38.66 3.16
41 42 3.819368 TGATGCCTCTGTTCAAACAAGA 58.181 40.909 0.00 0.00 38.66 3.02
42 43 4.401022 TGATGCCTCTGTTCAAACAAGAT 58.599 39.130 0.00 0.00 38.66 2.40
43 44 4.828939 TGATGCCTCTGTTCAAACAAGATT 59.171 37.500 0.00 0.00 38.66 2.40
44 45 6.003326 TGATGCCTCTGTTCAAACAAGATTA 58.997 36.000 0.00 0.00 38.66 1.75
45 46 6.660521 TGATGCCTCTGTTCAAACAAGATTAT 59.339 34.615 0.00 0.00 38.66 1.28
46 47 6.899393 TGCCTCTGTTCAAACAAGATTATT 57.101 33.333 0.00 0.00 38.66 1.40
47 48 7.288810 TGCCTCTGTTCAAACAAGATTATTT 57.711 32.000 0.00 0.00 38.66 1.40
48 49 8.402798 TGCCTCTGTTCAAACAAGATTATTTA 57.597 30.769 0.00 0.00 38.66 1.40
49 50 8.855110 TGCCTCTGTTCAAACAAGATTATTTAA 58.145 29.630 0.00 0.00 38.66 1.52
50 51 9.129209 GCCTCTGTTCAAACAAGATTATTTAAC 57.871 33.333 0.00 0.00 38.66 2.01
51 52 9.626045 CCTCTGTTCAAACAAGATTATTTAACC 57.374 33.333 0.00 0.00 38.66 2.85
61 62 9.855021 AACAAGATTATTTAACCAATACAGCAC 57.145 29.630 0.00 0.00 0.00 4.40
62 63 8.466798 ACAAGATTATTTAACCAATACAGCACC 58.533 33.333 0.00 0.00 0.00 5.01
63 64 8.686334 CAAGATTATTTAACCAATACAGCACCT 58.314 33.333 0.00 0.00 0.00 4.00
64 65 8.451908 AGATTATTTAACCAATACAGCACCTC 57.548 34.615 0.00 0.00 0.00 3.85
65 66 8.052748 AGATTATTTAACCAATACAGCACCTCA 58.947 33.333 0.00 0.00 0.00 3.86
66 67 5.897377 ATTTAACCAATACAGCACCTCAC 57.103 39.130 0.00 0.00 0.00 3.51
67 68 1.808411 AACCAATACAGCACCTCACG 58.192 50.000 0.00 0.00 0.00 4.35
68 69 0.036388 ACCAATACAGCACCTCACGG 60.036 55.000 0.00 0.00 0.00 4.94
69 70 0.249120 CCAATACAGCACCTCACGGA 59.751 55.000 0.00 0.00 0.00 4.69
70 71 1.359848 CAATACAGCACCTCACGGAC 58.640 55.000 0.00 0.00 0.00 4.79
71 72 1.066858 CAATACAGCACCTCACGGACT 60.067 52.381 0.00 0.00 0.00 3.85
72 73 0.532573 ATACAGCACCTCACGGACTG 59.467 55.000 0.00 0.00 41.04 3.51
73 74 0.538746 TACAGCACCTCACGGACTGA 60.539 55.000 11.22 0.00 39.07 3.41
74 75 1.080230 CAGCACCTCACGGACTGAG 60.080 63.158 0.00 0.00 45.63 3.35
75 76 1.531840 AGCACCTCACGGACTGAGT 60.532 57.895 1.40 0.00 44.69 3.41
76 77 1.115930 AGCACCTCACGGACTGAGTT 61.116 55.000 1.40 0.00 44.69 3.01
77 78 0.946221 GCACCTCACGGACTGAGTTG 60.946 60.000 1.40 0.00 44.69 3.16
78 79 0.946221 CACCTCACGGACTGAGTTGC 60.946 60.000 1.40 0.00 44.69 4.17
79 80 1.374758 CCTCACGGACTGAGTTGCC 60.375 63.158 1.40 0.00 44.69 4.52
80 81 1.367471 CTCACGGACTGAGTTGCCA 59.633 57.895 0.00 0.00 41.60 4.92
81 82 0.249868 CTCACGGACTGAGTTGCCAA 60.250 55.000 0.00 0.00 41.60 4.52
82 83 0.531974 TCACGGACTGAGTTGCCAAC 60.532 55.000 0.00 0.00 0.00 3.77
83 84 0.813610 CACGGACTGAGTTGCCAACA 60.814 55.000 10.69 0.00 0.00 3.33
84 85 0.108585 ACGGACTGAGTTGCCAACAT 59.891 50.000 10.69 0.00 0.00 2.71
85 86 1.238439 CGGACTGAGTTGCCAACATT 58.762 50.000 10.69 0.00 0.00 2.71
86 87 1.069022 CGGACTGAGTTGCCAACATTG 60.069 52.381 10.69 1.55 0.00 2.82
87 88 1.956477 GGACTGAGTTGCCAACATTGT 59.044 47.619 10.69 4.81 0.00 2.71
88 89 2.362077 GGACTGAGTTGCCAACATTGTT 59.638 45.455 10.69 0.00 0.00 2.83
89 90 3.374745 GACTGAGTTGCCAACATTGTTG 58.625 45.455 20.31 20.31 0.00 3.33
90 91 3.023119 ACTGAGTTGCCAACATTGTTGA 58.977 40.909 27.08 8.73 0.00 3.18
91 92 3.638160 ACTGAGTTGCCAACATTGTTGAT 59.362 39.130 27.08 10.06 0.00 2.57
92 93 4.099881 ACTGAGTTGCCAACATTGTTGATT 59.900 37.500 27.08 7.61 0.00 2.57
93 94 5.021033 TGAGTTGCCAACATTGTTGATTT 57.979 34.783 27.08 10.36 0.00 2.17
94 95 5.426504 TGAGTTGCCAACATTGTTGATTTT 58.573 33.333 27.08 10.97 0.00 1.82
95 96 5.879223 TGAGTTGCCAACATTGTTGATTTTT 59.121 32.000 27.08 11.89 0.00 1.94
122 123 9.757227 TGTTAATAAAAGAAGGACCAAACAATG 57.243 29.630 0.00 0.00 0.00 2.82
123 124 8.708742 GTTAATAAAAGAAGGACCAAACAATGC 58.291 33.333 0.00 0.00 0.00 3.56
124 125 6.670695 ATAAAAGAAGGACCAAACAATGCT 57.329 33.333 0.00 0.00 0.00 3.79
125 126 4.326504 AAAGAAGGACCAAACAATGCTG 57.673 40.909 0.00 0.00 0.00 4.41
126 127 2.949447 AGAAGGACCAAACAATGCTGT 58.051 42.857 0.00 0.00 37.39 4.40
127 128 4.098914 AGAAGGACCAAACAATGCTGTA 57.901 40.909 0.00 0.00 33.45 2.74
128 129 4.469657 AGAAGGACCAAACAATGCTGTAA 58.530 39.130 0.00 0.00 33.45 2.41
129 130 4.278419 AGAAGGACCAAACAATGCTGTAAC 59.722 41.667 0.00 0.00 33.45 2.50
130 131 2.552315 AGGACCAAACAATGCTGTAACG 59.448 45.455 0.00 0.00 33.45 3.18
131 132 2.550606 GGACCAAACAATGCTGTAACGA 59.449 45.455 0.00 0.00 33.45 3.85
132 133 3.551551 GACCAAACAATGCTGTAACGAC 58.448 45.455 0.00 0.00 33.45 4.34
133 134 3.211045 ACCAAACAATGCTGTAACGACT 58.789 40.909 0.00 0.00 33.45 4.18
134 135 4.382291 ACCAAACAATGCTGTAACGACTA 58.618 39.130 0.00 0.00 33.45 2.59
135 136 4.817464 ACCAAACAATGCTGTAACGACTAA 59.183 37.500 0.00 0.00 33.45 2.24
136 137 5.297278 ACCAAACAATGCTGTAACGACTAAA 59.703 36.000 0.00 0.00 33.45 1.85
137 138 5.851177 CCAAACAATGCTGTAACGACTAAAG 59.149 40.000 0.00 0.00 33.45 1.85
138 139 6.427150 CAAACAATGCTGTAACGACTAAAGT 58.573 36.000 0.00 0.00 33.45 2.66
139 140 6.613755 AACAATGCTGTAACGACTAAAGTT 57.386 33.333 0.00 0.00 33.45 2.66
140 141 7.718272 AACAATGCTGTAACGACTAAAGTTA 57.282 32.000 0.00 0.00 33.45 2.24
141 142 7.347508 ACAATGCTGTAACGACTAAAGTTAG 57.652 36.000 0.00 0.00 35.09 2.34
142 143 6.927381 ACAATGCTGTAACGACTAAAGTTAGT 59.073 34.615 3.36 3.36 39.29 2.24
143 144 7.440255 ACAATGCTGTAACGACTAAAGTTAGTT 59.560 33.333 5.24 9.01 37.83 2.24
144 145 6.758593 TGCTGTAACGACTAAAGTTAGTTG 57.241 37.500 14.41 14.41 46.18 3.16
145 146 5.693104 TGCTGTAACGACTAAAGTTAGTTGG 59.307 40.000 18.48 10.77 45.41 3.77
146 147 5.922544 GCTGTAACGACTAAAGTTAGTTGGA 59.077 40.000 18.48 7.12 45.41 3.53
147 148 6.421801 GCTGTAACGACTAAAGTTAGTTGGAA 59.578 38.462 18.48 7.00 45.41 3.53
148 149 7.568315 GCTGTAACGACTAAAGTTAGTTGGAAC 60.568 40.741 18.48 15.70 45.41 3.62
149 150 7.264221 TGTAACGACTAAAGTTAGTTGGAACA 58.736 34.615 18.48 17.38 45.41 3.18
150 151 7.763528 TGTAACGACTAAAGTTAGTTGGAACAA 59.236 33.333 18.48 7.73 45.41 2.83
151 152 7.614124 AACGACTAAAGTTAGTTGGAACAAA 57.386 32.000 18.48 0.00 45.41 2.83
152 153 7.614124 ACGACTAAAGTTAGTTGGAACAAAA 57.386 32.000 18.48 0.00 45.41 2.44
153 154 7.466805 ACGACTAAAGTTAGTTGGAACAAAAC 58.533 34.615 18.48 0.00 45.41 2.43
154 155 7.119553 ACGACTAAAGTTAGTTGGAACAAAACA 59.880 33.333 18.48 0.00 45.41 2.83
155 156 7.427318 CGACTAAAGTTAGTTGGAACAAAACAC 59.573 37.037 9.72 0.00 43.64 3.32
156 157 8.344446 ACTAAAGTTAGTTGGAACAAAACACT 57.656 30.769 0.00 0.00 40.96 3.55
157 158 8.799367 ACTAAAGTTAGTTGGAACAAAACACTT 58.201 29.630 0.00 0.00 40.96 3.16
163 164 3.878160 TGGAACAAAACACTTCAACCC 57.122 42.857 0.00 0.00 31.92 4.11
164 165 3.165875 TGGAACAAAACACTTCAACCCA 58.834 40.909 0.00 0.00 31.92 4.51
165 166 3.772025 TGGAACAAAACACTTCAACCCAT 59.228 39.130 0.00 0.00 31.92 4.00
166 167 4.223923 TGGAACAAAACACTTCAACCCATT 59.776 37.500 0.00 0.00 31.92 3.16
167 168 4.570369 GGAACAAAACACTTCAACCCATTG 59.430 41.667 0.00 0.00 37.14 2.82
168 169 4.817318 ACAAAACACTTCAACCCATTGT 57.183 36.364 0.00 0.00 37.11 2.71
169 170 5.159273 ACAAAACACTTCAACCCATTGTT 57.841 34.783 0.00 0.00 37.11 2.83
170 171 6.287589 ACAAAACACTTCAACCCATTGTTA 57.712 33.333 0.00 0.00 37.11 2.41
171 172 6.883744 ACAAAACACTTCAACCCATTGTTAT 58.116 32.000 0.00 0.00 37.11 1.89
172 173 8.012957 ACAAAACACTTCAACCCATTGTTATA 57.987 30.769 0.00 0.00 37.11 0.98
173 174 8.646900 ACAAAACACTTCAACCCATTGTTATAT 58.353 29.630 0.00 0.00 37.11 0.86
174 175 8.924691 CAAAACACTTCAACCCATTGTTATATG 58.075 33.333 0.00 0.00 37.11 1.78
175 176 6.207691 ACACTTCAACCCATTGTTATATGC 57.792 37.500 0.00 0.00 37.11 3.14
176 177 5.951747 ACACTTCAACCCATTGTTATATGCT 59.048 36.000 0.00 0.00 37.11 3.79
177 178 7.116075 ACACTTCAACCCATTGTTATATGCTA 58.884 34.615 0.00 0.00 37.11 3.49
178 179 7.283127 ACACTTCAACCCATTGTTATATGCTAG 59.717 37.037 0.00 0.00 37.11 3.42
179 180 6.263168 ACTTCAACCCATTGTTATATGCTAGC 59.737 38.462 8.10 8.10 37.11 3.42
180 181 5.940617 TCAACCCATTGTTATATGCTAGCT 58.059 37.500 17.23 4.07 37.11 3.32
181 182 5.764686 TCAACCCATTGTTATATGCTAGCTG 59.235 40.000 17.23 1.92 37.11 4.24
182 183 4.074970 ACCCATTGTTATATGCTAGCTGC 58.925 43.478 17.23 0.00 43.25 5.25
183 184 4.202503 ACCCATTGTTATATGCTAGCTGCT 60.203 41.667 17.23 7.57 43.37 4.24
184 185 4.394300 CCCATTGTTATATGCTAGCTGCTC 59.606 45.833 17.23 0.00 43.37 4.26
185 186 4.092529 CCATTGTTATATGCTAGCTGCTCG 59.907 45.833 17.23 0.00 43.37 5.03
186 187 4.322080 TTGTTATATGCTAGCTGCTCGT 57.678 40.909 17.23 0.00 43.37 4.18
187 188 3.642705 TGTTATATGCTAGCTGCTCGTG 58.357 45.455 17.23 0.00 43.37 4.35
188 189 2.354109 TATATGCTAGCTGCTCGTGC 57.646 50.000 17.23 10.26 43.37 5.34
189 190 0.665670 ATATGCTAGCTGCTCGTGCG 60.666 55.000 17.23 1.25 43.34 5.34
190 191 2.004808 TATGCTAGCTGCTCGTGCGT 62.005 55.000 17.23 13.09 43.34 5.24
191 192 2.004808 ATGCTAGCTGCTCGTGCGTA 62.005 55.000 17.23 0.00 43.34 4.42
192 193 2.224885 GCTAGCTGCTCGTGCGTAC 61.225 63.158 4.91 0.00 43.34 3.67
193 194 1.429825 CTAGCTGCTCGTGCGTACT 59.570 57.895 4.91 4.65 43.34 2.73
194 195 0.590230 CTAGCTGCTCGTGCGTACTC 60.590 60.000 4.91 0.00 43.34 2.59
195 196 1.303091 TAGCTGCTCGTGCGTACTCA 61.303 55.000 4.91 0.00 43.34 3.41
196 197 1.733041 GCTGCTCGTGCGTACTCAA 60.733 57.895 4.84 0.00 43.34 3.02
197 198 1.945776 GCTGCTCGTGCGTACTCAAC 61.946 60.000 4.84 0.00 43.34 3.18
198 199 0.387367 CTGCTCGTGCGTACTCAACT 60.387 55.000 4.84 0.00 43.34 3.16
199 200 0.876399 TGCTCGTGCGTACTCAACTA 59.124 50.000 4.84 0.00 43.34 2.24
200 201 1.257539 GCTCGTGCGTACTCAACTAC 58.742 55.000 1.24 0.00 0.00 2.73
201 202 1.135746 GCTCGTGCGTACTCAACTACT 60.136 52.381 1.24 0.00 0.00 2.57
202 203 2.506865 CTCGTGCGTACTCAACTACTG 58.493 52.381 1.24 0.00 0.00 2.74
203 204 1.198408 TCGTGCGTACTCAACTACTGG 59.802 52.381 1.24 0.00 0.00 4.00
204 205 1.347320 GTGCGTACTCAACTACTGGC 58.653 55.000 0.00 0.00 0.00 4.85
205 206 0.963225 TGCGTACTCAACTACTGGCA 59.037 50.000 0.00 0.00 0.00 4.92
206 207 1.336517 TGCGTACTCAACTACTGGCAC 60.337 52.381 0.00 0.00 0.00 5.01
207 208 1.067776 GCGTACTCAACTACTGGCACT 60.068 52.381 0.00 0.00 0.00 4.40
208 209 2.596452 CGTACTCAACTACTGGCACTG 58.404 52.381 0.00 0.00 0.00 3.66
209 210 2.228103 CGTACTCAACTACTGGCACTGA 59.772 50.000 0.00 0.00 0.00 3.41
210 211 3.119459 CGTACTCAACTACTGGCACTGAT 60.119 47.826 0.00 0.00 0.00 2.90
211 212 4.095932 CGTACTCAACTACTGGCACTGATA 59.904 45.833 0.00 0.00 0.00 2.15
212 213 4.457834 ACTCAACTACTGGCACTGATAC 57.542 45.455 0.00 0.00 0.00 2.24
213 214 3.832490 ACTCAACTACTGGCACTGATACA 59.168 43.478 0.00 0.00 0.00 2.29
214 215 4.283467 ACTCAACTACTGGCACTGATACAA 59.717 41.667 0.00 0.00 0.00 2.41
215 216 4.820897 TCAACTACTGGCACTGATACAAG 58.179 43.478 0.00 0.00 0.00 3.16
216 217 4.526650 TCAACTACTGGCACTGATACAAGA 59.473 41.667 0.00 0.00 0.00 3.02
217 218 5.187772 TCAACTACTGGCACTGATACAAGAT 59.812 40.000 0.00 0.00 0.00 2.40
218 219 5.269505 ACTACTGGCACTGATACAAGATC 57.730 43.478 0.00 0.00 0.00 2.75
219 220 4.711846 ACTACTGGCACTGATACAAGATCA 59.288 41.667 0.00 0.00 0.00 2.92
220 221 4.558226 ACTGGCACTGATACAAGATCAA 57.442 40.909 0.00 0.00 0.00 2.57
221 222 4.256920 ACTGGCACTGATACAAGATCAAC 58.743 43.478 0.00 0.00 0.00 3.18
222 223 3.609853 TGGCACTGATACAAGATCAACC 58.390 45.455 0.00 0.00 0.00 3.77
223 224 3.008923 TGGCACTGATACAAGATCAACCA 59.991 43.478 0.00 0.00 0.00 3.67
224 225 3.375299 GGCACTGATACAAGATCAACCAC 59.625 47.826 0.00 0.00 0.00 4.16
225 226 4.256920 GCACTGATACAAGATCAACCACT 58.743 43.478 0.00 0.00 0.00 4.00
226 227 4.331168 GCACTGATACAAGATCAACCACTC 59.669 45.833 0.00 0.00 0.00 3.51
227 228 4.872691 CACTGATACAAGATCAACCACTCC 59.127 45.833 0.00 0.00 0.00 3.85
228 229 4.532126 ACTGATACAAGATCAACCACTCCA 59.468 41.667 0.00 0.00 0.00 3.86
229 230 5.013079 ACTGATACAAGATCAACCACTCCAA 59.987 40.000 0.00 0.00 0.00 3.53
230 231 5.491070 TGATACAAGATCAACCACTCCAAG 58.509 41.667 0.00 0.00 0.00 3.61
231 232 2.508526 ACAAGATCAACCACTCCAAGC 58.491 47.619 0.00 0.00 0.00 4.01
232 233 2.107204 ACAAGATCAACCACTCCAAGCT 59.893 45.455 0.00 0.00 0.00 3.74
233 234 3.327757 ACAAGATCAACCACTCCAAGCTA 59.672 43.478 0.00 0.00 0.00 3.32
234 235 4.202461 ACAAGATCAACCACTCCAAGCTAA 60.202 41.667 0.00 0.00 0.00 3.09
235 236 3.944087 AGATCAACCACTCCAAGCTAAC 58.056 45.455 0.00 0.00 0.00 2.34
236 237 2.163818 TCAACCACTCCAAGCTAACG 57.836 50.000 0.00 0.00 0.00 3.18
237 238 1.689813 TCAACCACTCCAAGCTAACGA 59.310 47.619 0.00 0.00 0.00 3.85
238 239 1.798813 CAACCACTCCAAGCTAACGAC 59.201 52.381 0.00 0.00 0.00 4.34
239 240 1.045407 ACCACTCCAAGCTAACGACA 58.955 50.000 0.00 0.00 0.00 4.35
240 241 1.000955 ACCACTCCAAGCTAACGACAG 59.999 52.381 0.00 0.00 0.00 3.51
241 242 1.272490 CCACTCCAAGCTAACGACAGA 59.728 52.381 0.00 0.00 0.00 3.41
242 243 2.288825 CCACTCCAAGCTAACGACAGAA 60.289 50.000 0.00 0.00 0.00 3.02
243 244 3.390135 CACTCCAAGCTAACGACAGAAA 58.610 45.455 0.00 0.00 0.00 2.52
244 245 3.184581 CACTCCAAGCTAACGACAGAAAC 59.815 47.826 0.00 0.00 0.00 2.78
245 246 3.181469 ACTCCAAGCTAACGACAGAAACA 60.181 43.478 0.00 0.00 0.00 2.83
246 247 3.799366 TCCAAGCTAACGACAGAAACAA 58.201 40.909 0.00 0.00 0.00 2.83
247 248 4.385825 TCCAAGCTAACGACAGAAACAAT 58.614 39.130 0.00 0.00 0.00 2.71
248 249 4.451096 TCCAAGCTAACGACAGAAACAATC 59.549 41.667 0.00 0.00 0.00 2.67
259 260 5.277634 CGACAGAAACAATCGTTAGGGTTTT 60.278 40.000 0.00 0.00 33.92 2.43
260 261 6.068473 ACAGAAACAATCGTTAGGGTTTTC 57.932 37.500 0.00 0.00 33.92 2.29
263 264 1.808343 ACAATCGTTAGGGTTTTCGCC 59.192 47.619 0.00 0.00 0.00 5.54
266 267 2.030958 CGTTAGGGTTTTCGCCGCT 61.031 57.895 0.00 0.00 0.00 5.52
269 270 1.293267 TTAGGGTTTTCGCCGCTTCG 61.293 55.000 0.00 0.00 0.00 3.79
333 335 0.389391 CTATGGAGACGCGGTGGATT 59.611 55.000 12.47 0.00 0.00 3.01
345 347 1.201424 GGTGGATTCCGGTCCTTACT 58.799 55.000 12.07 0.00 39.12 2.24
370 372 1.556451 GGAGGGCTCCGTTTTTAGGTA 59.444 52.381 0.00 0.00 40.36 3.08
415 422 4.051922 GTGTCATGTTCAAGAAGACGAGT 58.948 43.478 0.00 0.00 32.08 4.18
444 452 6.049790 GGCGACTTCTTAAGATGGAATAAGT 58.950 40.000 19.34 12.07 32.27 2.24
522 531 1.376812 GGTTTGTCTCCGCCGGATT 60.377 57.895 6.16 0.00 0.00 3.01
548 557 0.589223 GATTTGGTCGGCGTTTGTCA 59.411 50.000 6.85 0.00 0.00 3.58
564 573 2.462723 TGTCATCGGTGGATCCACTTA 58.537 47.619 37.26 27.32 45.52 2.24
589 610 3.006110 TCCGGTCTTTGTTCGTCTATGTT 59.994 43.478 0.00 0.00 0.00 2.71
591 612 4.377022 CCGGTCTTTGTTCGTCTATGTTTG 60.377 45.833 0.00 0.00 0.00 2.93
592 613 4.464112 GGTCTTTGTTCGTCTATGTTTGC 58.536 43.478 0.00 0.00 0.00 3.68
593 614 4.141680 GTCTTTGTTCGTCTATGTTTGCG 58.858 43.478 0.00 0.00 0.00 4.85
594 615 3.805422 TCTTTGTTCGTCTATGTTTGCGT 59.195 39.130 0.00 0.00 0.00 5.24
595 616 3.513462 TTGTTCGTCTATGTTTGCGTG 57.487 42.857 0.00 0.00 0.00 5.34
598 619 2.717580 TCGTCTATGTTTGCGTGTCT 57.282 45.000 0.00 0.00 0.00 3.41
607 628 0.950836 TTTGCGTGTCTGGTTGGATG 59.049 50.000 0.00 0.00 0.00 3.51
634 655 5.781210 TGATCTATGCTTCTCTTCATCGT 57.219 39.130 0.00 0.00 0.00 3.73
665 686 0.603975 GTTCTGGTGTGCTGGTCCTC 60.604 60.000 0.00 0.00 0.00 3.71
668 689 1.459348 TGGTGTGCTGGTCCTCTGA 60.459 57.895 0.00 0.00 0.00 3.27
670 691 1.188219 GGTGTGCTGGTCCTCTGAGA 61.188 60.000 6.17 0.00 0.00 3.27
696 717 1.060726 CACGACGACTTCTCGACTGC 61.061 60.000 0.00 0.00 43.06 4.40
704 725 2.008329 ACTTCTCGACTGCCTACTACG 58.992 52.381 0.00 0.00 0.00 3.51
774 810 1.743958 AGTGCTTGTAGTCGTCGCTAT 59.256 47.619 0.00 0.00 0.00 2.97
803 841 9.533253 GGTCTATGGATTTGGATGTAATTTTTG 57.467 33.333 0.00 0.00 0.00 2.44
815 859 8.200792 TGGATGTAATTTTTGCTTACAGTGTTT 58.799 29.630 0.00 0.00 41.10 2.83
847 891 6.624352 ACAAATTGACGGATGATGAATAGG 57.376 37.500 0.00 0.00 0.00 2.57
892 936 6.959671 AAAACACAGCGATTTTCTTTTTCA 57.040 29.167 0.00 0.00 0.00 2.69
893 937 7.538303 AAAACACAGCGATTTTCTTTTTCAT 57.462 28.000 0.00 0.00 0.00 2.57
894 938 7.538303 AAACACAGCGATTTTCTTTTTCATT 57.462 28.000 0.00 0.00 0.00 2.57
895 939 7.538303 AACACAGCGATTTTCTTTTTCATTT 57.462 28.000 0.00 0.00 0.00 2.32
896 940 7.538303 ACACAGCGATTTTCTTTTTCATTTT 57.462 28.000 0.00 0.00 0.00 1.82
897 941 7.973601 ACACAGCGATTTTCTTTTTCATTTTT 58.026 26.923 0.00 0.00 0.00 1.94
921 965 7.847711 TTTCTTTGAAAAGGATGATTACCCA 57.152 32.000 3.08 0.00 36.67 4.51
922 966 7.466746 TTCTTTGAAAAGGATGATTACCCAG 57.533 36.000 3.08 0.00 36.67 4.45
923 967 5.951747 TCTTTGAAAAGGATGATTACCCAGG 59.048 40.000 3.08 0.00 36.67 4.45
924 968 4.249638 TGAAAAGGATGATTACCCAGGG 57.750 45.455 2.85 2.85 0.00 4.45
925 969 2.755952 AAAGGATGATTACCCAGGGC 57.244 50.000 4.91 0.00 0.00 5.19
926 970 1.912862 AAGGATGATTACCCAGGGCT 58.087 50.000 4.91 0.00 0.00 5.19
927 971 1.439543 AGGATGATTACCCAGGGCTC 58.560 55.000 4.91 0.31 0.00 4.70
928 972 1.061033 AGGATGATTACCCAGGGCTCT 60.061 52.381 4.91 0.00 0.00 4.09
929 973 2.182312 AGGATGATTACCCAGGGCTCTA 59.818 50.000 4.91 0.00 0.00 2.43
930 974 3.181390 AGGATGATTACCCAGGGCTCTAT 60.181 47.826 4.91 0.00 0.00 1.98
931 975 3.198853 GGATGATTACCCAGGGCTCTATC 59.801 52.174 4.91 4.14 0.00 2.08
932 976 3.344535 TGATTACCCAGGGCTCTATCA 57.655 47.619 4.91 6.85 0.00 2.15
933 977 3.242867 TGATTACCCAGGGCTCTATCAG 58.757 50.000 4.91 0.00 0.00 2.90
934 978 3.116746 TGATTACCCAGGGCTCTATCAGA 60.117 47.826 4.91 0.00 0.00 3.27
935 979 3.637821 TTACCCAGGGCTCTATCAGAT 57.362 47.619 4.91 0.00 0.00 2.90
936 980 4.759793 TTACCCAGGGCTCTATCAGATA 57.240 45.455 4.91 0.00 0.00 1.98
937 981 3.637821 ACCCAGGGCTCTATCAGATAA 57.362 47.619 4.91 0.00 0.00 1.75
938 982 4.153371 ACCCAGGGCTCTATCAGATAAT 57.847 45.455 4.91 0.00 0.00 1.28
939 983 3.843027 ACCCAGGGCTCTATCAGATAATG 59.157 47.826 4.91 0.00 0.00 1.90
940 984 3.370315 CCCAGGGCTCTATCAGATAATGC 60.370 52.174 0.00 5.99 0.00 3.56
941 985 3.262660 CCAGGGCTCTATCAGATAATGCA 59.737 47.826 13.30 0.00 0.00 3.96
942 986 4.252073 CAGGGCTCTATCAGATAATGCAC 58.748 47.826 13.30 10.78 0.00 4.57
943 987 3.906218 AGGGCTCTATCAGATAATGCACA 59.094 43.478 15.15 0.00 0.00 4.57
944 988 3.999663 GGGCTCTATCAGATAATGCACAC 59.000 47.826 13.30 3.53 0.00 3.82
945 989 4.503817 GGGCTCTATCAGATAATGCACACA 60.504 45.833 13.30 0.00 0.00 3.72
946 990 4.689812 GGCTCTATCAGATAATGCACACAG 59.310 45.833 13.30 0.00 0.00 3.66
947 991 4.152045 GCTCTATCAGATAATGCACACAGC 59.848 45.833 0.00 0.00 45.96 4.40
958 1002 2.909076 GCACACAGCGAACAAAAATG 57.091 45.000 0.00 0.00 0.00 2.32
959 1003 1.071305 GCACACAGCGAACAAAAATGC 60.071 47.619 0.00 0.00 0.00 3.56
960 1004 2.462889 CACACAGCGAACAAAAATGCT 58.537 42.857 0.00 0.00 38.43 3.79
961 1005 3.626977 CACACAGCGAACAAAAATGCTA 58.373 40.909 0.00 0.00 35.56 3.49
962 1006 3.665409 CACACAGCGAACAAAAATGCTAG 59.335 43.478 0.00 0.00 35.56 3.42
963 1007 3.563808 ACACAGCGAACAAAAATGCTAGA 59.436 39.130 0.00 0.00 35.56 2.43
964 1008 3.908382 CACAGCGAACAAAAATGCTAGAC 59.092 43.478 0.00 0.00 35.56 2.59
965 1009 3.155998 CAGCGAACAAAAATGCTAGACG 58.844 45.455 0.00 0.00 35.56 4.18
966 1010 2.806244 AGCGAACAAAAATGCTAGACGT 59.194 40.909 0.00 0.00 35.56 4.34
967 1011 3.991773 AGCGAACAAAAATGCTAGACGTA 59.008 39.130 0.00 0.00 35.56 3.57
968 1012 4.079710 GCGAACAAAAATGCTAGACGTAC 58.920 43.478 0.00 0.00 0.00 3.67
969 1013 4.376615 GCGAACAAAAATGCTAGACGTACA 60.377 41.667 0.00 0.00 0.00 2.90
970 1014 5.672051 CGAACAAAAATGCTAGACGTACAA 58.328 37.500 0.00 0.00 0.00 2.41
971 1015 6.130723 CGAACAAAAATGCTAGACGTACAAA 58.869 36.000 0.00 0.00 0.00 2.83
972 1016 6.629649 CGAACAAAAATGCTAGACGTACAAAA 59.370 34.615 0.00 0.00 0.00 2.44
973 1017 7.149351 CGAACAAAAATGCTAGACGTACAAAAG 60.149 37.037 0.00 0.00 0.00 2.27
974 1018 7.254227 ACAAAAATGCTAGACGTACAAAAGA 57.746 32.000 0.00 0.00 0.00 2.52
975 1019 7.699566 ACAAAAATGCTAGACGTACAAAAGAA 58.300 30.769 0.00 0.00 0.00 2.52
976 1020 8.349983 ACAAAAATGCTAGACGTACAAAAGAAT 58.650 29.630 0.00 0.00 0.00 2.40
977 1021 9.820229 CAAAAATGCTAGACGTACAAAAGAATA 57.180 29.630 0.00 0.00 0.00 1.75
978 1022 9.821662 AAAAATGCTAGACGTACAAAAGAATAC 57.178 29.630 0.00 0.00 0.00 1.89
979 1023 8.542497 AAATGCTAGACGTACAAAAGAATACA 57.458 30.769 0.00 0.00 0.00 2.29
980 1024 7.757097 ATGCTAGACGTACAAAAGAATACAG 57.243 36.000 0.00 0.00 0.00 2.74
981 1025 6.097356 TGCTAGACGTACAAAAGAATACAGG 58.903 40.000 0.00 0.00 0.00 4.00
982 1026 6.071784 TGCTAGACGTACAAAAGAATACAGGA 60.072 38.462 0.00 0.00 0.00 3.86
983 1027 6.979238 GCTAGACGTACAAAAGAATACAGGAT 59.021 38.462 0.00 0.00 0.00 3.24
984 1028 7.491696 GCTAGACGTACAAAAGAATACAGGATT 59.508 37.037 0.00 0.00 0.00 3.01
985 1029 9.367444 CTAGACGTACAAAAGAATACAGGATTT 57.633 33.333 0.00 0.00 0.00 2.17
986 1030 8.617290 AGACGTACAAAAGAATACAGGATTTT 57.383 30.769 0.00 0.00 0.00 1.82
987 1031 9.715121 AGACGTACAAAAGAATACAGGATTTTA 57.285 29.630 0.00 0.00 0.00 1.52
988 1032 9.750882 GACGTACAAAAGAATACAGGATTTTAC 57.249 33.333 0.00 0.00 0.00 2.01
989 1033 9.275398 ACGTACAAAAGAATACAGGATTTTACA 57.725 29.630 0.00 0.00 0.00 2.41
990 1034 9.755064 CGTACAAAAGAATACAGGATTTTACAG 57.245 33.333 0.00 0.00 0.00 2.74
992 1036 7.602753 ACAAAAGAATACAGGATTTTACAGGC 58.397 34.615 0.00 0.00 0.00 4.85
993 1037 7.451566 ACAAAAGAATACAGGATTTTACAGGCT 59.548 33.333 0.00 0.00 0.00 4.58
994 1038 7.631717 AAAGAATACAGGATTTTACAGGCTC 57.368 36.000 0.00 0.00 0.00 4.70
995 1039 6.567602 AGAATACAGGATTTTACAGGCTCT 57.432 37.500 0.00 0.00 0.00 4.09
996 1040 6.963322 AGAATACAGGATTTTACAGGCTCTT 58.037 36.000 0.00 0.00 0.00 2.85
997 1041 7.406104 AGAATACAGGATTTTACAGGCTCTTT 58.594 34.615 0.00 0.00 0.00 2.52
998 1042 7.890655 AGAATACAGGATTTTACAGGCTCTTTT 59.109 33.333 0.00 0.00 0.00 2.27
999 1043 5.966742 ACAGGATTTTACAGGCTCTTTTC 57.033 39.130 0.00 0.00 0.00 2.29
1000 1044 5.385198 ACAGGATTTTACAGGCTCTTTTCA 58.615 37.500 0.00 0.00 0.00 2.69
1001 1045 6.012745 ACAGGATTTTACAGGCTCTTTTCAT 58.987 36.000 0.00 0.00 0.00 2.57
1002 1046 6.151817 ACAGGATTTTACAGGCTCTTTTCATC 59.848 38.462 0.00 0.00 0.00 2.92
1003 1047 6.376581 CAGGATTTTACAGGCTCTTTTCATCT 59.623 38.462 0.00 0.00 0.00 2.90
1004 1048 7.554118 CAGGATTTTACAGGCTCTTTTCATCTA 59.446 37.037 0.00 0.00 0.00 1.98
1005 1049 7.772757 AGGATTTTACAGGCTCTTTTCATCTAG 59.227 37.037 0.00 0.00 0.00 2.43
1006 1050 7.554476 GGATTTTACAGGCTCTTTTCATCTAGT 59.446 37.037 0.00 0.00 0.00 2.57
1007 1051 9.601217 GATTTTACAGGCTCTTTTCATCTAGTA 57.399 33.333 0.00 0.00 0.00 1.82
1008 1052 9.959721 ATTTTACAGGCTCTTTTCATCTAGTAA 57.040 29.630 0.00 0.00 0.00 2.24
1009 1053 8.773404 TTTACAGGCTCTTTTCATCTAGTAAC 57.227 34.615 0.00 0.00 0.00 2.50
1010 1054 5.735766 ACAGGCTCTTTTCATCTAGTAACC 58.264 41.667 0.00 0.00 0.00 2.85
1011 1055 5.248477 ACAGGCTCTTTTCATCTAGTAACCA 59.752 40.000 0.00 0.00 0.00 3.67
1012 1056 6.173339 CAGGCTCTTTTCATCTAGTAACCAA 58.827 40.000 0.00 0.00 0.00 3.67
1013 1057 6.825721 CAGGCTCTTTTCATCTAGTAACCAAT 59.174 38.462 0.00 0.00 0.00 3.16
1014 1058 7.011857 CAGGCTCTTTTCATCTAGTAACCAATC 59.988 40.741 0.00 0.00 0.00 2.67
1015 1059 6.823689 GGCTCTTTTCATCTAGTAACCAATCA 59.176 38.462 0.00 0.00 0.00 2.57
1016 1060 7.201652 GGCTCTTTTCATCTAGTAACCAATCAC 60.202 40.741 0.00 0.00 0.00 3.06
1017 1061 7.334421 GCTCTTTTCATCTAGTAACCAATCACA 59.666 37.037 0.00 0.00 0.00 3.58
1018 1062 9.219603 CTCTTTTCATCTAGTAACCAATCACAA 57.780 33.333 0.00 0.00 0.00 3.33
1019 1063 9.567776 TCTTTTCATCTAGTAACCAATCACAAA 57.432 29.630 0.00 0.00 0.00 2.83
1020 1064 9.612620 CTTTTCATCTAGTAACCAATCACAAAC 57.387 33.333 0.00 0.00 0.00 2.93
1021 1065 8.918202 TTTCATCTAGTAACCAATCACAAACT 57.082 30.769 0.00 0.00 0.00 2.66
1022 1066 8.918202 TTCATCTAGTAACCAATCACAAACTT 57.082 30.769 0.00 0.00 0.00 2.66
1023 1067 8.322906 TCATCTAGTAACCAATCACAAACTTG 57.677 34.615 0.00 0.00 0.00 3.16
1024 1068 6.554334 TCTAGTAACCAATCACAAACTTGC 57.446 37.500 0.00 0.00 0.00 4.01
1025 1069 4.584327 AGTAACCAATCACAAACTTGCC 57.416 40.909 0.00 0.00 0.00 4.52
1026 1070 4.215109 AGTAACCAATCACAAACTTGCCT 58.785 39.130 0.00 0.00 0.00 4.75
1027 1071 3.733443 AACCAATCACAAACTTGCCTC 57.267 42.857 0.00 0.00 0.00 4.70
1028 1072 1.963515 ACCAATCACAAACTTGCCTCC 59.036 47.619 0.00 0.00 0.00 4.30
1029 1073 1.273327 CCAATCACAAACTTGCCTCCC 59.727 52.381 0.00 0.00 0.00 4.30
1030 1074 1.273327 CAATCACAAACTTGCCTCCCC 59.727 52.381 0.00 0.00 0.00 4.81
1031 1075 0.779997 ATCACAAACTTGCCTCCCCT 59.220 50.000 0.00 0.00 0.00 4.79
1032 1076 0.178992 TCACAAACTTGCCTCCCCTG 60.179 55.000 0.00 0.00 0.00 4.45
1033 1077 0.178992 CACAAACTTGCCTCCCCTGA 60.179 55.000 0.00 0.00 0.00 3.86
1034 1078 0.779997 ACAAACTTGCCTCCCCTGAT 59.220 50.000 0.00 0.00 0.00 2.90
1035 1079 1.147817 ACAAACTTGCCTCCCCTGATT 59.852 47.619 0.00 0.00 0.00 2.57
1036 1080 2.250924 CAAACTTGCCTCCCCTGATTT 58.749 47.619 0.00 0.00 0.00 2.17
1037 1081 2.634453 CAAACTTGCCTCCCCTGATTTT 59.366 45.455 0.00 0.00 0.00 1.82
1038 1082 2.222227 ACTTGCCTCCCCTGATTTTC 57.778 50.000 0.00 0.00 0.00 2.29
1039 1083 1.428912 ACTTGCCTCCCCTGATTTTCA 59.571 47.619 0.00 0.00 0.00 2.69
1040 1084 2.097825 CTTGCCTCCCCTGATTTTCAG 58.902 52.381 0.00 0.00 43.91 3.02
1062 1106 1.523758 GTGGTCCTGATTGAAACGCT 58.476 50.000 0.00 0.00 0.00 5.07
1086 1130 2.182791 CGACAGGACGCTGAGCAT 59.817 61.111 4.88 0.00 0.00 3.79
1111 1163 5.406477 GCCTTCATTTAAAGCAGTTGAAAGG 59.594 40.000 3.51 7.26 0.00 3.11
1171 1223 5.221461 ACAGAACGCGGAAGGATATTTAGAT 60.221 40.000 12.47 0.00 0.00 1.98
1178 1235 7.040201 ACGCGGAAGGATATTTAGATAGTACAA 60.040 37.037 12.47 0.00 0.00 2.41
1201 1258 4.658713 CAGCACAGACTGTTCACTAATG 57.341 45.455 5.04 0.00 32.78 1.90
1202 1259 4.309933 CAGCACAGACTGTTCACTAATGA 58.690 43.478 5.04 0.00 32.78 2.57
1203 1260 4.934001 CAGCACAGACTGTTCACTAATGAT 59.066 41.667 5.04 0.00 33.85 2.45
1205 1262 4.692625 GCACAGACTGTTCACTAATGATGT 59.307 41.667 5.04 0.00 33.85 3.06
1206 1263 5.869344 GCACAGACTGTTCACTAATGATGTA 59.131 40.000 5.04 0.00 33.85 2.29
1210 1267 7.094506 ACAGACTGTTCACTAATGATGTACGTA 60.095 37.037 1.07 0.00 33.85 3.57
1302 1614 2.324541 AGGAAGCTTCACACTCTGTCT 58.675 47.619 27.02 9.28 0.00 3.41
1328 1648 0.037447 ACAAGGGAAGAGCTCAAGCC 59.963 55.000 17.77 13.33 43.38 4.35
1346 1735 1.878948 GCCGGGCGCCTACAAATATTA 60.879 52.381 28.56 0.00 0.00 0.98
1355 1744 4.389374 GCCTACAAATATTAGAGCAGCCA 58.611 43.478 0.00 0.00 0.00 4.75
1367 1756 2.776536 AGAGCAGCCAGAACTAATCCAT 59.223 45.455 0.00 0.00 0.00 3.41
1374 1763 3.696051 GCCAGAACTAATCCATGAAGCAA 59.304 43.478 0.00 0.00 0.00 3.91
1381 1770 8.993121 AGAACTAATCCATGAAGCAAATATACG 58.007 33.333 0.00 0.00 0.00 3.06
1407 1853 4.108299 CCACCGGTGCCATGGCTA 62.108 66.667 35.53 20.20 42.51 3.93
1421 1867 1.516603 GGCTACTGCGTCCTTCGTC 60.517 63.158 0.00 0.00 42.13 4.20
1422 1868 1.868251 GCTACTGCGTCCTTCGTCG 60.868 63.158 0.00 0.00 42.13 5.12
1722 2174 1.612442 GGTGGGCTAGTGGTGGAGA 60.612 63.158 0.00 0.00 0.00 3.71
1724 2176 1.982395 TGGGCTAGTGGTGGAGACG 60.982 63.158 0.00 0.00 0.00 4.18
1850 2302 2.066999 GGAGGCCGGTGGAGAAGAT 61.067 63.158 1.90 0.00 0.00 2.40
1851 2303 1.144936 GAGGCCGGTGGAGAAGATG 59.855 63.158 1.90 0.00 0.00 2.90
1852 2304 1.306141 AGGCCGGTGGAGAAGATGA 60.306 57.895 1.90 0.00 0.00 2.92
1853 2305 1.153349 GGCCGGTGGAGAAGATGAC 60.153 63.158 1.90 0.00 0.00 3.06
1854 2306 1.519455 GCCGGTGGAGAAGATGACG 60.519 63.158 1.90 0.00 0.00 4.35
1855 2307 1.945354 GCCGGTGGAGAAGATGACGA 61.945 60.000 1.90 0.00 0.00 4.20
1856 2308 0.530744 CCGGTGGAGAAGATGACGAA 59.469 55.000 0.00 0.00 0.00 3.85
1857 2309 1.469940 CCGGTGGAGAAGATGACGAAG 60.470 57.143 0.00 0.00 0.00 3.79
1858 2310 1.472878 CGGTGGAGAAGATGACGAAGA 59.527 52.381 0.00 0.00 0.00 2.87
1980 2432 1.685355 AACCCCTGGTTTTGCTGTGC 61.685 55.000 0.00 0.00 44.33 4.57
2030 2482 2.670934 CTGGAGCAAACCGCAGCT 60.671 61.111 0.00 0.00 46.13 4.24
2185 2640 0.390860 ATCACTATCAGCCAGGACGC 59.609 55.000 0.00 0.00 0.00 5.19
2400 2856 2.018542 TTGATTCCGAAGCTTACCGG 57.981 50.000 18.07 18.07 46.57 5.28
2445 2904 6.124340 TCATCACAATCATACATTGCCTTCT 58.876 36.000 0.00 0.00 32.55 2.85
2453 2912 5.815581 TCATACATTGCCTTCTGGTTTACT 58.184 37.500 0.00 0.00 35.27 2.24
2455 2914 6.719370 TCATACATTGCCTTCTGGTTTACTTT 59.281 34.615 0.00 0.00 35.27 2.66
2568 3030 2.447887 GCGGCTGTGATGTCGTCTG 61.448 63.158 0.00 0.00 37.38 3.51
2611 3073 0.599728 CTTCGGCTAGCATGGAGAGC 60.600 60.000 18.24 0.00 35.39 4.09
2612 3074 2.355445 TTCGGCTAGCATGGAGAGCG 62.355 60.000 18.24 8.23 37.07 5.03
2668 3130 4.957759 TCAGTTGAATGTGCAGATCATG 57.042 40.909 0.00 0.00 0.00 3.07
2671 3133 3.442625 AGTTGAATGTGCAGATCATGGTG 59.557 43.478 0.00 0.00 0.00 4.17
2679 3141 1.022735 CAGATCATGGTGGCAGCTTC 58.977 55.000 18.53 9.37 0.00 3.86
2715 4043 2.289945 ACCACTTTCTCCTGTCATGCTC 60.290 50.000 0.00 0.00 0.00 4.26
2749 4077 1.303074 TTGAGAAGCTGCAGCAGGG 60.303 57.895 38.24 3.04 45.16 4.45
2810 4138 1.277842 TCAGCTCGGCTTGTGGAAATA 59.722 47.619 0.00 0.00 36.40 1.40
2813 4141 2.171448 AGCTCGGCTTGTGGAAATAGAT 59.829 45.455 0.00 0.00 33.89 1.98
2829 4157 7.084486 GGAAATAGATTTGGTGTGTCAGTTTC 58.916 38.462 0.00 0.00 0.00 2.78
2848 4345 7.924412 TCAGTTTCGGCGAGAATATTATTTAGT 59.076 33.333 10.46 0.00 38.86 2.24
2909 4406 1.373497 GGCTCTCACACGACCACAG 60.373 63.158 0.00 0.00 0.00 3.66
2927 4424 1.190833 AGGACCAGACAGGAGCACAG 61.191 60.000 0.00 0.00 41.22 3.66
2948 4445 6.912591 CACAGAACATTTAAGTCAGGTGTTTC 59.087 38.462 0.00 0.00 33.55 2.78
2949 4446 6.136071 CAGAACATTTAAGTCAGGTGTTTCG 58.864 40.000 0.00 0.00 33.55 3.46
2973 4470 6.913132 CGACATCTAAGTATCACCTTACACTG 59.087 42.308 0.00 0.00 0.00 3.66
3115 4614 0.664166 GCATTCACAACTTGCCCACG 60.664 55.000 0.00 0.00 0.00 4.94
3174 4673 0.532573 CTAACTCGCTCTTCAGCCCA 59.467 55.000 0.00 0.00 43.56 5.36
3265 4764 4.572985 TTTCTCCTGCAATGACACAAAG 57.427 40.909 0.00 0.00 0.00 2.77
3266 4765 1.881973 TCTCCTGCAATGACACAAAGC 59.118 47.619 0.00 0.00 0.00 3.51
3439 4943 3.087031 CAATGCAGTCTGATCCCAAGTT 58.913 45.455 3.32 0.00 0.00 2.66
3677 5185 6.462347 GGGACATAACAATCGCCCATTTATTT 60.462 38.462 0.00 0.00 35.63 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.978146 ACAGCGGGGATAGCTCAGTT 60.978 55.000 0.00 0.00 44.06 3.16
2 3 0.531532 CAACAGCGGGGATAGCTCAG 60.532 60.000 0.00 0.00 44.06 3.35
3 4 0.975556 TCAACAGCGGGGATAGCTCA 60.976 55.000 0.00 0.00 44.06 4.26
4 5 0.394565 ATCAACAGCGGGGATAGCTC 59.605 55.000 0.00 0.00 44.06 4.09
6 7 1.510480 GCATCAACAGCGGGGATAGC 61.510 60.000 0.00 0.00 0.00 2.97
7 8 0.886490 GGCATCAACAGCGGGGATAG 60.886 60.000 0.00 0.00 0.00 2.08
8 9 1.148273 GGCATCAACAGCGGGGATA 59.852 57.895 0.00 0.00 0.00 2.59
9 10 2.124151 GGCATCAACAGCGGGGAT 60.124 61.111 0.00 0.00 0.00 3.85
10 11 3.329542 GAGGCATCAACAGCGGGGA 62.330 63.158 0.00 0.00 0.00 4.81
11 12 2.825836 GAGGCATCAACAGCGGGG 60.826 66.667 0.00 0.00 0.00 5.73
12 13 2.110967 CAGAGGCATCAACAGCGGG 61.111 63.158 0.00 0.00 0.00 6.13
13 14 0.957395 AACAGAGGCATCAACAGCGG 60.957 55.000 0.00 0.00 0.00 5.52
14 15 0.445436 GAACAGAGGCATCAACAGCG 59.555 55.000 0.00 0.00 0.00 5.18
15 16 1.527034 TGAACAGAGGCATCAACAGC 58.473 50.000 0.00 0.00 0.00 4.40
16 17 3.316029 TGTTTGAACAGAGGCATCAACAG 59.684 43.478 0.00 0.00 33.13 3.16
17 18 3.286353 TGTTTGAACAGAGGCATCAACA 58.714 40.909 0.00 0.00 33.13 3.33
18 19 3.988379 TGTTTGAACAGAGGCATCAAC 57.012 42.857 0.00 0.00 33.13 3.18
19 20 4.206375 TCTTGTTTGAACAGAGGCATCAA 58.794 39.130 0.00 0.00 40.50 2.57
20 21 3.819368 TCTTGTTTGAACAGAGGCATCA 58.181 40.909 0.00 0.00 40.50 3.07
21 22 5.382618 AATCTTGTTTGAACAGAGGCATC 57.617 39.130 0.00 0.00 40.50 3.91
22 23 7.472334 AATAATCTTGTTTGAACAGAGGCAT 57.528 32.000 0.00 0.00 40.50 4.40
23 24 6.899393 AATAATCTTGTTTGAACAGAGGCA 57.101 33.333 0.00 0.00 40.50 4.75
24 25 9.129209 GTTAAATAATCTTGTTTGAACAGAGGC 57.871 33.333 0.00 0.00 40.50 4.70
25 26 9.626045 GGTTAAATAATCTTGTTTGAACAGAGG 57.374 33.333 0.00 0.00 40.50 3.69
35 36 9.855021 GTGCTGTATTGGTTAAATAATCTTGTT 57.145 29.630 0.00 0.00 32.47 2.83
36 37 8.466798 GGTGCTGTATTGGTTAAATAATCTTGT 58.533 33.333 0.00 0.00 32.47 3.16
37 38 8.686334 AGGTGCTGTATTGGTTAAATAATCTTG 58.314 33.333 0.00 0.00 32.47 3.02
38 39 8.823220 AGGTGCTGTATTGGTTAAATAATCTT 57.177 30.769 0.00 0.00 32.47 2.40
39 40 8.052748 TGAGGTGCTGTATTGGTTAAATAATCT 58.947 33.333 0.00 0.00 32.47 2.40
40 41 8.129211 GTGAGGTGCTGTATTGGTTAAATAATC 58.871 37.037 0.00 0.00 32.47 1.75
41 42 7.201696 CGTGAGGTGCTGTATTGGTTAAATAAT 60.202 37.037 0.00 0.00 32.47 1.28
42 43 6.092944 CGTGAGGTGCTGTATTGGTTAAATAA 59.907 38.462 0.00 0.00 32.47 1.40
43 44 5.583061 CGTGAGGTGCTGTATTGGTTAAATA 59.417 40.000 0.00 0.00 0.00 1.40
44 45 4.394920 CGTGAGGTGCTGTATTGGTTAAAT 59.605 41.667 0.00 0.00 0.00 1.40
45 46 3.749088 CGTGAGGTGCTGTATTGGTTAAA 59.251 43.478 0.00 0.00 0.00 1.52
46 47 3.331150 CGTGAGGTGCTGTATTGGTTAA 58.669 45.455 0.00 0.00 0.00 2.01
47 48 2.967362 CGTGAGGTGCTGTATTGGTTA 58.033 47.619 0.00 0.00 0.00 2.85
48 49 1.808411 CGTGAGGTGCTGTATTGGTT 58.192 50.000 0.00 0.00 0.00 3.67
49 50 3.532896 CGTGAGGTGCTGTATTGGT 57.467 52.632 0.00 0.00 0.00 3.67
63 64 0.531974 GTTGGCAACTCAGTCCGTGA 60.532 55.000 22.66 0.00 37.61 4.35
64 65 0.813610 TGTTGGCAACTCAGTCCGTG 60.814 55.000 28.71 0.00 37.61 4.94
65 66 0.108585 ATGTTGGCAACTCAGTCCGT 59.891 50.000 28.71 1.33 37.61 4.69
66 67 1.069022 CAATGTTGGCAACTCAGTCCG 60.069 52.381 28.71 8.60 37.61 4.79
67 68 1.956477 ACAATGTTGGCAACTCAGTCC 59.044 47.619 28.71 3.39 37.61 3.85
68 69 3.066621 TCAACAATGTTGGCAACTCAGTC 59.933 43.478 28.71 4.13 37.61 3.51
69 70 3.023119 TCAACAATGTTGGCAACTCAGT 58.977 40.909 28.71 20.39 37.61 3.41
70 71 3.713858 TCAACAATGTTGGCAACTCAG 57.286 42.857 28.71 19.81 37.61 3.35
71 72 4.669206 AATCAACAATGTTGGCAACTCA 57.331 36.364 28.71 12.23 37.61 3.41
72 73 5.989551 AAAATCAACAATGTTGGCAACTC 57.010 34.783 28.71 6.41 37.61 3.01
96 97 9.757227 CATTGTTTGGTCCTTCTTTTATTAACA 57.243 29.630 0.00 0.00 0.00 2.41
97 98 8.708742 GCATTGTTTGGTCCTTCTTTTATTAAC 58.291 33.333 0.00 0.00 0.00 2.01
98 99 8.646900 AGCATTGTTTGGTCCTTCTTTTATTAA 58.353 29.630 0.00 0.00 0.00 1.40
99 100 8.087750 CAGCATTGTTTGGTCCTTCTTTTATTA 58.912 33.333 0.00 0.00 32.51 0.98
100 101 6.930722 CAGCATTGTTTGGTCCTTCTTTTATT 59.069 34.615 0.00 0.00 32.51 1.40
101 102 6.041979 ACAGCATTGTTTGGTCCTTCTTTTAT 59.958 34.615 0.00 0.00 32.28 1.40
102 103 5.362430 ACAGCATTGTTTGGTCCTTCTTTTA 59.638 36.000 0.00 0.00 32.28 1.52
103 104 4.162131 ACAGCATTGTTTGGTCCTTCTTTT 59.838 37.500 0.00 0.00 32.28 2.27
104 105 3.706086 ACAGCATTGTTTGGTCCTTCTTT 59.294 39.130 0.00 0.00 32.28 2.52
105 106 3.299503 ACAGCATTGTTTGGTCCTTCTT 58.700 40.909 0.00 0.00 32.28 2.52
106 107 2.949447 ACAGCATTGTTTGGTCCTTCT 58.051 42.857 0.00 0.00 32.28 2.85
107 108 4.546570 GTTACAGCATTGTTTGGTCCTTC 58.453 43.478 0.00 0.00 38.76 3.46
108 109 3.004315 CGTTACAGCATTGTTTGGTCCTT 59.996 43.478 0.00 0.00 38.76 3.36
109 110 2.552315 CGTTACAGCATTGTTTGGTCCT 59.448 45.455 0.00 0.00 38.76 3.85
110 111 2.550606 TCGTTACAGCATTGTTTGGTCC 59.449 45.455 0.00 0.00 38.76 4.46
111 112 3.250040 AGTCGTTACAGCATTGTTTGGTC 59.750 43.478 0.00 0.00 38.76 4.02
112 113 3.211045 AGTCGTTACAGCATTGTTTGGT 58.789 40.909 0.00 0.00 38.76 3.67
113 114 3.896648 AGTCGTTACAGCATTGTTTGG 57.103 42.857 0.00 0.00 38.76 3.28
114 115 6.427150 ACTTTAGTCGTTACAGCATTGTTTG 58.573 36.000 0.00 0.00 38.76 2.93
115 116 6.613755 ACTTTAGTCGTTACAGCATTGTTT 57.386 33.333 0.00 0.00 38.76 2.83
116 117 6.613755 AACTTTAGTCGTTACAGCATTGTT 57.386 33.333 0.00 0.00 38.76 2.83
117 118 6.927381 ACTAACTTTAGTCGTTACAGCATTGT 59.073 34.615 0.00 0.00 39.72 2.71
118 119 7.347508 ACTAACTTTAGTCGTTACAGCATTG 57.652 36.000 0.00 0.00 39.72 2.82
119 120 7.095355 CCAACTAACTTTAGTCGTTACAGCATT 60.095 37.037 2.13 0.00 42.86 3.56
120 121 6.367969 CCAACTAACTTTAGTCGTTACAGCAT 59.632 38.462 2.13 0.00 42.86 3.79
121 122 5.693104 CCAACTAACTTTAGTCGTTACAGCA 59.307 40.000 2.13 0.00 42.86 4.41
122 123 5.922544 TCCAACTAACTTTAGTCGTTACAGC 59.077 40.000 2.13 0.00 42.86 4.40
123 124 7.436080 TGTTCCAACTAACTTTAGTCGTTACAG 59.564 37.037 2.13 0.00 42.86 2.74
124 125 7.264221 TGTTCCAACTAACTTTAGTCGTTACA 58.736 34.615 2.13 3.51 42.86 2.41
125 126 7.698836 TGTTCCAACTAACTTTAGTCGTTAC 57.301 36.000 2.13 1.34 42.86 2.50
126 127 8.715191 TTTGTTCCAACTAACTTTAGTCGTTA 57.285 30.769 2.13 0.00 42.86 3.18
127 128 7.614124 TTTGTTCCAACTAACTTTAGTCGTT 57.386 32.000 2.13 0.00 42.86 3.85
128 129 7.119553 TGTTTTGTTCCAACTAACTTTAGTCGT 59.880 33.333 2.13 0.00 42.86 4.34
129 130 7.427318 GTGTTTTGTTCCAACTAACTTTAGTCG 59.573 37.037 2.13 0.00 42.86 4.18
130 131 8.456471 AGTGTTTTGTTCCAACTAACTTTAGTC 58.544 33.333 2.13 0.00 42.86 2.59
131 132 8.344446 AGTGTTTTGTTCCAACTAACTTTAGT 57.656 30.769 0.00 0.00 45.43 2.24
132 133 9.285770 GAAGTGTTTTGTTCCAACTAACTTTAG 57.714 33.333 0.00 0.00 36.82 1.85
133 134 8.794553 TGAAGTGTTTTGTTCCAACTAACTTTA 58.205 29.630 8.48 0.00 0.00 1.85
134 135 7.662897 TGAAGTGTTTTGTTCCAACTAACTTT 58.337 30.769 8.48 4.96 0.00 2.66
135 136 7.222000 TGAAGTGTTTTGTTCCAACTAACTT 57.778 32.000 0.00 0.00 0.00 2.66
136 137 6.827586 TGAAGTGTTTTGTTCCAACTAACT 57.172 33.333 8.48 0.00 0.00 2.24
137 138 6.309494 GGTTGAAGTGTTTTGTTCCAACTAAC 59.691 38.462 0.00 0.00 0.00 2.34
138 139 6.391537 GGTTGAAGTGTTTTGTTCCAACTAA 58.608 36.000 0.00 0.00 0.00 2.24
139 140 5.105675 GGGTTGAAGTGTTTTGTTCCAACTA 60.106 40.000 0.00 0.00 0.00 2.24
140 141 4.322424 GGGTTGAAGTGTTTTGTTCCAACT 60.322 41.667 0.00 0.00 0.00 3.16
141 142 3.930229 GGGTTGAAGTGTTTTGTTCCAAC 59.070 43.478 0.00 0.00 0.00 3.77
142 143 3.578716 TGGGTTGAAGTGTTTTGTTCCAA 59.421 39.130 0.00 0.00 0.00 3.53
143 144 3.165875 TGGGTTGAAGTGTTTTGTTCCA 58.834 40.909 0.00 0.00 0.00 3.53
144 145 3.878160 TGGGTTGAAGTGTTTTGTTCC 57.122 42.857 0.00 0.00 0.00 3.62
145 146 5.175127 ACAATGGGTTGAAGTGTTTTGTTC 58.825 37.500 0.00 0.00 38.71 3.18
146 147 5.159273 ACAATGGGTTGAAGTGTTTTGTT 57.841 34.783 0.00 0.00 38.71 2.83
147 148 4.817318 ACAATGGGTTGAAGTGTTTTGT 57.183 36.364 0.00 0.00 38.71 2.83
148 149 8.924691 CATATAACAATGGGTTGAAGTGTTTTG 58.075 33.333 0.00 0.00 40.73 2.44
149 150 7.602265 GCATATAACAATGGGTTGAAGTGTTTT 59.398 33.333 0.00 0.00 40.73 2.43
150 151 7.039082 AGCATATAACAATGGGTTGAAGTGTTT 60.039 33.333 0.00 0.00 40.73 2.83
151 152 6.437162 AGCATATAACAATGGGTTGAAGTGTT 59.563 34.615 0.00 0.00 40.73 3.32
152 153 5.951747 AGCATATAACAATGGGTTGAAGTGT 59.048 36.000 0.00 0.00 40.73 3.55
153 154 6.455360 AGCATATAACAATGGGTTGAAGTG 57.545 37.500 0.00 0.00 40.73 3.16
154 155 6.263168 GCTAGCATATAACAATGGGTTGAAGT 59.737 38.462 10.63 0.00 40.73 3.01
155 156 6.488006 AGCTAGCATATAACAATGGGTTGAAG 59.512 38.462 18.83 0.00 40.73 3.02
156 157 6.262944 CAGCTAGCATATAACAATGGGTTGAA 59.737 38.462 18.83 0.00 40.73 2.69
157 158 5.764686 CAGCTAGCATATAACAATGGGTTGA 59.235 40.000 18.83 0.00 40.73 3.18
158 159 5.563475 GCAGCTAGCATATAACAATGGGTTG 60.563 44.000 18.83 1.17 44.79 3.77
159 160 4.520492 GCAGCTAGCATATAACAATGGGTT 59.480 41.667 18.83 0.00 44.79 4.11
160 161 4.074970 GCAGCTAGCATATAACAATGGGT 58.925 43.478 18.83 0.00 44.79 4.51
161 162 4.691860 GCAGCTAGCATATAACAATGGG 57.308 45.455 18.83 0.00 44.79 4.00
174 175 2.102357 TACGCACGAGCAGCTAGC 59.898 61.111 6.62 6.62 42.27 3.42
175 176 0.590230 GAGTACGCACGAGCAGCTAG 60.590 60.000 5.50 0.00 42.27 3.42
176 177 1.303091 TGAGTACGCACGAGCAGCTA 61.303 55.000 5.50 0.00 42.27 3.32
177 178 2.142357 TTGAGTACGCACGAGCAGCT 62.142 55.000 5.50 0.00 42.27 4.24
178 179 1.733041 TTGAGTACGCACGAGCAGC 60.733 57.895 5.50 0.00 42.27 5.25
179 180 0.387367 AGTTGAGTACGCACGAGCAG 60.387 55.000 5.50 0.37 42.27 4.24
180 181 0.876399 TAGTTGAGTACGCACGAGCA 59.124 50.000 5.50 0.00 42.27 4.26
181 182 1.135746 AGTAGTTGAGTACGCACGAGC 60.136 52.381 0.00 0.00 37.42 5.03
182 183 2.506865 CAGTAGTTGAGTACGCACGAG 58.493 52.381 0.00 0.00 0.00 4.18
183 184 1.198408 CCAGTAGTTGAGTACGCACGA 59.802 52.381 0.00 0.00 0.00 4.35
184 185 1.614385 CCAGTAGTTGAGTACGCACG 58.386 55.000 0.00 0.00 0.00 5.34
185 186 1.336517 TGCCAGTAGTTGAGTACGCAC 60.337 52.381 0.00 0.00 0.00 5.34
186 187 0.963225 TGCCAGTAGTTGAGTACGCA 59.037 50.000 0.00 0.00 0.00 5.24
187 188 1.067776 AGTGCCAGTAGTTGAGTACGC 60.068 52.381 0.00 0.00 0.00 4.42
188 189 2.228103 TCAGTGCCAGTAGTTGAGTACG 59.772 50.000 0.00 0.00 0.00 3.67
189 190 3.936372 TCAGTGCCAGTAGTTGAGTAC 57.064 47.619 0.00 0.00 0.00 2.73
190 191 5.014202 TGTATCAGTGCCAGTAGTTGAGTA 58.986 41.667 0.00 0.00 0.00 2.59
191 192 3.832490 TGTATCAGTGCCAGTAGTTGAGT 59.168 43.478 0.00 0.00 0.00 3.41
192 193 4.456280 TGTATCAGTGCCAGTAGTTGAG 57.544 45.455 0.00 0.00 0.00 3.02
193 194 4.526650 TCTTGTATCAGTGCCAGTAGTTGA 59.473 41.667 0.00 0.00 0.00 3.18
194 195 4.820897 TCTTGTATCAGTGCCAGTAGTTG 58.179 43.478 0.00 0.00 0.00 3.16
195 196 5.187772 TGATCTTGTATCAGTGCCAGTAGTT 59.812 40.000 0.00 0.00 0.00 2.24
196 197 4.711846 TGATCTTGTATCAGTGCCAGTAGT 59.288 41.667 0.00 0.00 0.00 2.73
197 198 5.268118 TGATCTTGTATCAGTGCCAGTAG 57.732 43.478 0.00 0.00 0.00 2.57
198 199 5.419542 GTTGATCTTGTATCAGTGCCAGTA 58.580 41.667 0.00 0.00 0.00 2.74
199 200 4.256920 GTTGATCTTGTATCAGTGCCAGT 58.743 43.478 0.00 0.00 0.00 4.00
200 201 3.624861 GGTTGATCTTGTATCAGTGCCAG 59.375 47.826 0.00 0.00 0.00 4.85
201 202 3.008923 TGGTTGATCTTGTATCAGTGCCA 59.991 43.478 0.00 0.00 0.00 4.92
202 203 3.375299 GTGGTTGATCTTGTATCAGTGCC 59.625 47.826 0.00 0.00 0.00 5.01
203 204 4.256920 AGTGGTTGATCTTGTATCAGTGC 58.743 43.478 0.00 0.00 0.00 4.40
204 205 4.872691 GGAGTGGTTGATCTTGTATCAGTG 59.127 45.833 0.00 0.00 0.00 3.66
205 206 4.532126 TGGAGTGGTTGATCTTGTATCAGT 59.468 41.667 0.00 0.00 0.00 3.41
206 207 5.089970 TGGAGTGGTTGATCTTGTATCAG 57.910 43.478 0.00 0.00 0.00 2.90
207 208 5.491070 CTTGGAGTGGTTGATCTTGTATCA 58.509 41.667 0.00 0.00 0.00 2.15
208 209 4.333926 GCTTGGAGTGGTTGATCTTGTATC 59.666 45.833 0.00 0.00 0.00 2.24
209 210 4.018960 AGCTTGGAGTGGTTGATCTTGTAT 60.019 41.667 0.00 0.00 0.00 2.29
210 211 3.327757 AGCTTGGAGTGGTTGATCTTGTA 59.672 43.478 0.00 0.00 0.00 2.41
211 212 2.107204 AGCTTGGAGTGGTTGATCTTGT 59.893 45.455 0.00 0.00 0.00 3.16
212 213 2.787994 AGCTTGGAGTGGTTGATCTTG 58.212 47.619 0.00 0.00 0.00 3.02
213 214 4.327680 GTTAGCTTGGAGTGGTTGATCTT 58.672 43.478 0.00 0.00 0.00 2.40
214 215 3.617531 CGTTAGCTTGGAGTGGTTGATCT 60.618 47.826 0.00 0.00 0.00 2.75
215 216 2.673368 CGTTAGCTTGGAGTGGTTGATC 59.327 50.000 0.00 0.00 0.00 2.92
216 217 2.301870 TCGTTAGCTTGGAGTGGTTGAT 59.698 45.455 0.00 0.00 0.00 2.57
217 218 1.689813 TCGTTAGCTTGGAGTGGTTGA 59.310 47.619 0.00 0.00 0.00 3.18
218 219 1.798813 GTCGTTAGCTTGGAGTGGTTG 59.201 52.381 0.00 0.00 0.00 3.77
219 220 1.414919 TGTCGTTAGCTTGGAGTGGTT 59.585 47.619 0.00 0.00 0.00 3.67
220 221 1.000955 CTGTCGTTAGCTTGGAGTGGT 59.999 52.381 0.00 0.00 0.00 4.16
221 222 1.272490 TCTGTCGTTAGCTTGGAGTGG 59.728 52.381 0.00 0.00 0.00 4.00
222 223 2.724977 TCTGTCGTTAGCTTGGAGTG 57.275 50.000 0.00 0.00 0.00 3.51
223 224 3.181469 TGTTTCTGTCGTTAGCTTGGAGT 60.181 43.478 0.00 0.00 0.00 3.85
224 225 3.390135 TGTTTCTGTCGTTAGCTTGGAG 58.610 45.455 0.00 0.00 0.00 3.86
225 226 3.462483 TGTTTCTGTCGTTAGCTTGGA 57.538 42.857 0.00 0.00 0.00 3.53
226 227 4.666655 CGATTGTTTCTGTCGTTAGCTTGG 60.667 45.833 0.00 0.00 0.00 3.61
227 228 4.084537 ACGATTGTTTCTGTCGTTAGCTTG 60.085 41.667 0.00 0.00 45.27 4.01
228 229 4.056050 ACGATTGTTTCTGTCGTTAGCTT 58.944 39.130 0.00 0.00 45.27 3.74
229 230 3.650139 ACGATTGTTTCTGTCGTTAGCT 58.350 40.909 0.00 0.00 45.27 3.32
235 236 3.323243 ACCCTAACGATTGTTTCTGTCG 58.677 45.455 3.03 0.00 39.54 4.35
236 237 5.684550 AAACCCTAACGATTGTTTCTGTC 57.315 39.130 3.03 0.00 39.54 3.51
237 238 5.277634 CGAAAACCCTAACGATTGTTTCTGT 60.278 40.000 3.03 0.00 39.54 3.41
238 239 5.144359 CGAAAACCCTAACGATTGTTTCTG 58.856 41.667 3.03 0.00 39.54 3.02
239 240 4.319984 GCGAAAACCCTAACGATTGTTTCT 60.320 41.667 3.03 0.00 39.54 2.52
240 241 3.910170 GCGAAAACCCTAACGATTGTTTC 59.090 43.478 3.03 0.00 39.54 2.78
241 242 3.304861 GGCGAAAACCCTAACGATTGTTT 60.305 43.478 3.03 0.00 39.54 2.83
242 243 2.227149 GGCGAAAACCCTAACGATTGTT 59.773 45.455 3.29 3.29 42.19 2.83
243 244 1.808343 GGCGAAAACCCTAACGATTGT 59.192 47.619 0.00 0.00 0.00 2.71
244 245 1.201987 CGGCGAAAACCCTAACGATTG 60.202 52.381 0.00 0.00 0.00 2.67
245 246 1.081094 CGGCGAAAACCCTAACGATT 58.919 50.000 0.00 0.00 0.00 3.34
246 247 1.363885 GCGGCGAAAACCCTAACGAT 61.364 55.000 12.98 0.00 0.00 3.73
247 248 2.028733 GCGGCGAAAACCCTAACGA 61.029 57.895 12.98 0.00 0.00 3.85
248 249 1.571215 AAGCGGCGAAAACCCTAACG 61.571 55.000 12.98 0.00 0.00 3.18
296 298 3.324713 CCCTAAGGCCACAGGAGG 58.675 66.667 21.29 11.78 33.42 4.30
333 335 3.072468 CCGCCAGTAAGGACCGGA 61.072 66.667 9.46 0.00 43.39 5.14
370 372 8.635328 ACACAAACCCTACGAAAATTAGAAAAT 58.365 29.630 0.00 0.00 0.00 1.82
383 390 3.135225 TGAACATGACACAAACCCTACG 58.865 45.455 0.00 0.00 0.00 3.51
384 391 4.819630 TCTTGAACATGACACAAACCCTAC 59.180 41.667 0.00 0.00 0.00 3.18
415 422 0.885879 TCTTAAGAAGTCGCCGCTGA 59.114 50.000 1.68 0.00 0.00 4.26
444 452 0.983378 GGGGGCTAGGCAGAGAGAAA 60.983 60.000 19.14 0.00 0.00 2.52
450 458 1.922821 GAAATGGGGGCTAGGCAGA 59.077 57.895 19.14 0.89 0.00 4.26
516 525 1.550072 ACCAAATCCTGCAAAATCCGG 59.450 47.619 0.00 0.00 0.00 5.14
522 531 1.861542 CGCCGACCAAATCCTGCAAA 61.862 55.000 0.00 0.00 0.00 3.68
564 573 1.893801 AGACGAACAAAGACCGGATCT 59.106 47.619 9.46 4.30 40.46 2.75
589 610 1.514678 GCATCCAACCAGACACGCAA 61.515 55.000 0.00 0.00 0.00 4.85
591 612 1.237285 AAGCATCCAACCAGACACGC 61.237 55.000 0.00 0.00 0.00 5.34
592 613 1.238439 AAAGCATCCAACCAGACACG 58.762 50.000 0.00 0.00 0.00 4.49
593 614 2.622942 TCAAAAGCATCCAACCAGACAC 59.377 45.455 0.00 0.00 0.00 3.67
594 615 2.942804 TCAAAAGCATCCAACCAGACA 58.057 42.857 0.00 0.00 0.00 3.41
595 616 3.760684 AGATCAAAAGCATCCAACCAGAC 59.239 43.478 0.00 0.00 0.00 3.51
598 619 4.098349 GCATAGATCAAAAGCATCCAACCA 59.902 41.667 0.00 0.00 0.00 3.67
607 628 6.674694 TGAAGAGAAGCATAGATCAAAAGC 57.325 37.500 0.00 0.00 0.00 3.51
634 655 2.664851 CAGAACAGCAACCGCCGA 60.665 61.111 0.00 0.00 39.83 5.54
665 686 0.803117 TCGTCGTGCTAAGGTCTCAG 59.197 55.000 0.00 0.00 0.00 3.35
668 689 1.199558 GAAGTCGTCGTGCTAAGGTCT 59.800 52.381 0.00 0.00 0.00 3.85
670 691 1.199558 GAGAAGTCGTCGTGCTAAGGT 59.800 52.381 0.00 0.00 0.00 3.50
696 717 2.344025 GGCAAACCTTGTCGTAGTAGG 58.656 52.381 0.00 0.00 35.14 3.18
704 725 2.597510 AGCCGGGCAAACCTTGTC 60.598 61.111 23.09 0.00 36.97 3.18
826 870 5.532406 CCACCTATTCATCATCCGTCAATTT 59.468 40.000 0.00 0.00 0.00 1.82
827 871 5.065914 CCACCTATTCATCATCCGTCAATT 58.934 41.667 0.00 0.00 0.00 2.32
828 872 4.505566 CCCACCTATTCATCATCCGTCAAT 60.506 45.833 0.00 0.00 0.00 2.57
834 878 4.713792 ACTTCCCACCTATTCATCATCC 57.286 45.455 0.00 0.00 0.00 3.51
895 939 8.709308 TGGGTAATCATCCTTTTCAAAGAAAAA 58.291 29.630 6.41 0.00 38.28 1.94
896 940 8.256356 TGGGTAATCATCCTTTTCAAAGAAAA 57.744 30.769 0.56 5.00 38.28 2.29
897 941 7.039082 CCTGGGTAATCATCCTTTTCAAAGAAA 60.039 37.037 0.56 0.00 38.28 2.52
898 942 6.437162 CCTGGGTAATCATCCTTTTCAAAGAA 59.563 38.462 0.56 0.00 38.28 2.52
899 943 5.951747 CCTGGGTAATCATCCTTTTCAAAGA 59.048 40.000 0.56 0.00 38.28 2.52
900 944 5.127682 CCCTGGGTAATCATCCTTTTCAAAG 59.872 44.000 3.97 0.00 35.79 2.77
901 945 5.022787 CCCTGGGTAATCATCCTTTTCAAA 58.977 41.667 3.97 0.00 0.00 2.69
902 946 4.609301 CCCTGGGTAATCATCCTTTTCAA 58.391 43.478 3.97 0.00 0.00 2.69
903 947 3.627237 GCCCTGGGTAATCATCCTTTTCA 60.627 47.826 15.56 0.00 0.00 2.69
904 948 2.959030 GCCCTGGGTAATCATCCTTTTC 59.041 50.000 15.56 0.00 0.00 2.29
905 949 2.587307 AGCCCTGGGTAATCATCCTTTT 59.413 45.455 15.56 0.00 0.00 2.27
906 950 2.175715 GAGCCCTGGGTAATCATCCTTT 59.824 50.000 15.56 0.00 0.00 3.11
907 951 1.777272 GAGCCCTGGGTAATCATCCTT 59.223 52.381 15.56 0.00 0.00 3.36
908 952 1.061033 AGAGCCCTGGGTAATCATCCT 60.061 52.381 15.56 0.00 0.00 3.24
909 953 1.439543 AGAGCCCTGGGTAATCATCC 58.560 55.000 15.56 0.00 0.00 3.51
910 954 3.840666 TGATAGAGCCCTGGGTAATCATC 59.159 47.826 15.56 11.20 0.00 2.92
911 955 3.843027 CTGATAGAGCCCTGGGTAATCAT 59.157 47.826 15.56 1.70 31.94 2.45
912 956 3.116746 TCTGATAGAGCCCTGGGTAATCA 60.117 47.826 15.56 15.64 31.67 2.57
913 957 3.511477 TCTGATAGAGCCCTGGGTAATC 58.489 50.000 15.56 10.35 0.00 1.75
914 958 3.637821 TCTGATAGAGCCCTGGGTAAT 57.362 47.619 15.56 0.18 0.00 1.89
915 959 3.637821 ATCTGATAGAGCCCTGGGTAA 57.362 47.619 15.56 0.00 0.00 2.85
916 960 4.759793 TTATCTGATAGAGCCCTGGGTA 57.240 45.455 15.56 0.00 0.00 3.69
917 961 3.637821 TTATCTGATAGAGCCCTGGGT 57.362 47.619 15.56 0.49 0.00 4.51
918 962 3.370315 GCATTATCTGATAGAGCCCTGGG 60.370 52.174 8.86 8.86 0.00 4.45
919 963 3.262660 TGCATTATCTGATAGAGCCCTGG 59.737 47.826 15.97 0.00 0.00 4.45
920 964 4.252073 GTGCATTATCTGATAGAGCCCTG 58.748 47.826 15.97 4.23 0.00 4.45
921 965 3.906218 TGTGCATTATCTGATAGAGCCCT 59.094 43.478 15.97 0.00 0.00 5.19
922 966 3.999663 GTGTGCATTATCTGATAGAGCCC 59.000 47.826 15.97 8.89 0.00 5.19
923 967 4.635223 TGTGTGCATTATCTGATAGAGCC 58.365 43.478 15.97 10.47 0.00 4.70
924 968 4.152045 GCTGTGTGCATTATCTGATAGAGC 59.848 45.833 13.32 13.32 42.31 4.09
925 969 4.385146 CGCTGTGTGCATTATCTGATAGAG 59.615 45.833 0.00 0.00 43.06 2.43
926 970 4.037923 TCGCTGTGTGCATTATCTGATAGA 59.962 41.667 0.00 0.00 43.06 1.98
927 971 4.301628 TCGCTGTGTGCATTATCTGATAG 58.698 43.478 0.00 0.00 43.06 2.08
928 972 4.320608 TCGCTGTGTGCATTATCTGATA 57.679 40.909 0.00 0.00 43.06 2.15
929 973 3.183793 TCGCTGTGTGCATTATCTGAT 57.816 42.857 0.00 0.00 43.06 2.90
930 974 2.671130 TCGCTGTGTGCATTATCTGA 57.329 45.000 0.00 0.00 43.06 3.27
931 975 2.416202 TGTTCGCTGTGTGCATTATCTG 59.584 45.455 0.00 0.00 43.06 2.90
932 976 2.698803 TGTTCGCTGTGTGCATTATCT 58.301 42.857 0.00 0.00 43.06 1.98
933 977 3.469899 TTGTTCGCTGTGTGCATTATC 57.530 42.857 0.00 0.00 43.06 1.75
934 978 3.913548 TTTGTTCGCTGTGTGCATTAT 57.086 38.095 0.00 0.00 43.06 1.28
935 979 3.699779 TTTTGTTCGCTGTGTGCATTA 57.300 38.095 0.00 0.00 43.06 1.90
936 980 2.575694 TTTTGTTCGCTGTGTGCATT 57.424 40.000 0.00 0.00 43.06 3.56
937 981 2.575694 TTTTTGTTCGCTGTGTGCAT 57.424 40.000 0.00 0.00 43.06 3.96
938 982 2.191802 CATTTTTGTTCGCTGTGTGCA 58.808 42.857 0.00 0.00 43.06 4.57
939 983 1.071305 GCATTTTTGTTCGCTGTGTGC 60.071 47.619 0.00 0.00 38.57 4.57
940 984 2.462889 AGCATTTTTGTTCGCTGTGTG 58.537 42.857 0.00 0.00 32.33 3.82
941 985 2.869233 AGCATTTTTGTTCGCTGTGT 57.131 40.000 0.00 0.00 32.33 3.72
942 986 3.908382 GTCTAGCATTTTTGTTCGCTGTG 59.092 43.478 0.00 0.00 35.93 3.66
943 987 3.363970 CGTCTAGCATTTTTGTTCGCTGT 60.364 43.478 0.00 0.00 35.93 4.40
944 988 3.155998 CGTCTAGCATTTTTGTTCGCTG 58.844 45.455 0.00 0.00 35.93 5.18
945 989 2.806244 ACGTCTAGCATTTTTGTTCGCT 59.194 40.909 0.00 0.00 38.51 4.93
946 990 3.183237 ACGTCTAGCATTTTTGTTCGC 57.817 42.857 0.00 0.00 0.00 4.70
947 991 5.258685 TGTACGTCTAGCATTTTTGTTCG 57.741 39.130 0.00 0.00 0.00 3.95
948 992 7.853929 TCTTTTGTACGTCTAGCATTTTTGTTC 59.146 33.333 0.00 0.00 0.00 3.18
949 993 7.699566 TCTTTTGTACGTCTAGCATTTTTGTT 58.300 30.769 0.00 0.00 0.00 2.83
950 994 7.254227 TCTTTTGTACGTCTAGCATTTTTGT 57.746 32.000 0.00 0.00 0.00 2.83
951 995 8.728088 ATTCTTTTGTACGTCTAGCATTTTTG 57.272 30.769 0.00 0.00 0.00 2.44
952 996 9.821662 GTATTCTTTTGTACGTCTAGCATTTTT 57.178 29.630 0.00 0.00 0.00 1.94
953 997 8.995220 TGTATTCTTTTGTACGTCTAGCATTTT 58.005 29.630 0.00 0.00 0.00 1.82
954 998 8.542497 TGTATTCTTTTGTACGTCTAGCATTT 57.458 30.769 0.00 0.00 0.00 2.32
955 999 7.277981 CCTGTATTCTTTTGTACGTCTAGCATT 59.722 37.037 0.00 0.00 0.00 3.56
956 1000 6.757010 CCTGTATTCTTTTGTACGTCTAGCAT 59.243 38.462 0.00 0.00 0.00 3.79
957 1001 6.071784 TCCTGTATTCTTTTGTACGTCTAGCA 60.072 38.462 0.00 0.00 0.00 3.49
958 1002 6.327934 TCCTGTATTCTTTTGTACGTCTAGC 58.672 40.000 0.00 0.00 0.00 3.42
959 1003 8.928270 AATCCTGTATTCTTTTGTACGTCTAG 57.072 34.615 0.00 0.00 0.00 2.43
960 1004 9.715121 AAAATCCTGTATTCTTTTGTACGTCTA 57.285 29.630 0.00 0.00 0.00 2.59
961 1005 8.617290 AAAATCCTGTATTCTTTTGTACGTCT 57.383 30.769 0.00 0.00 0.00 4.18
962 1006 9.750882 GTAAAATCCTGTATTCTTTTGTACGTC 57.249 33.333 0.00 0.00 0.00 4.34
963 1007 9.275398 TGTAAAATCCTGTATTCTTTTGTACGT 57.725 29.630 0.00 0.00 0.00 3.57
964 1008 9.755064 CTGTAAAATCCTGTATTCTTTTGTACG 57.245 33.333 0.00 0.00 0.00 3.67
966 1010 8.736244 GCCTGTAAAATCCTGTATTCTTTTGTA 58.264 33.333 0.00 0.00 0.00 2.41
967 1011 7.451566 AGCCTGTAAAATCCTGTATTCTTTTGT 59.548 33.333 0.00 0.00 0.00 2.83
968 1012 7.830739 AGCCTGTAAAATCCTGTATTCTTTTG 58.169 34.615 0.00 0.00 0.00 2.44
969 1013 7.890655 AGAGCCTGTAAAATCCTGTATTCTTTT 59.109 33.333 0.00 0.00 0.00 2.27
970 1014 7.406104 AGAGCCTGTAAAATCCTGTATTCTTT 58.594 34.615 0.00 0.00 0.00 2.52
971 1015 6.963322 AGAGCCTGTAAAATCCTGTATTCTT 58.037 36.000 0.00 0.00 0.00 2.52
972 1016 6.567602 AGAGCCTGTAAAATCCTGTATTCT 57.432 37.500 0.00 0.00 0.00 2.40
973 1017 7.631717 AAAGAGCCTGTAAAATCCTGTATTC 57.368 36.000 0.00 0.00 0.00 1.75
974 1018 7.669722 TGAAAAGAGCCTGTAAAATCCTGTATT 59.330 33.333 0.00 0.00 0.00 1.89
975 1019 7.175104 TGAAAAGAGCCTGTAAAATCCTGTAT 58.825 34.615 0.00 0.00 0.00 2.29
976 1020 6.539173 TGAAAAGAGCCTGTAAAATCCTGTA 58.461 36.000 0.00 0.00 0.00 2.74
977 1021 5.385198 TGAAAAGAGCCTGTAAAATCCTGT 58.615 37.500 0.00 0.00 0.00 4.00
978 1022 5.964958 TGAAAAGAGCCTGTAAAATCCTG 57.035 39.130 0.00 0.00 0.00 3.86
979 1023 6.488715 AGATGAAAAGAGCCTGTAAAATCCT 58.511 36.000 0.00 0.00 0.00 3.24
980 1024 6.765915 AGATGAAAAGAGCCTGTAAAATCC 57.234 37.500 0.00 0.00 0.00 3.01
981 1025 8.499403 ACTAGATGAAAAGAGCCTGTAAAATC 57.501 34.615 0.00 0.00 0.00 2.17
982 1026 9.959721 TTACTAGATGAAAAGAGCCTGTAAAAT 57.040 29.630 0.00 0.00 0.00 1.82
983 1027 9.216117 GTTACTAGATGAAAAGAGCCTGTAAAA 57.784 33.333 0.00 0.00 0.00 1.52
984 1028 7.822822 GGTTACTAGATGAAAAGAGCCTGTAAA 59.177 37.037 0.00 0.00 0.00 2.01
985 1029 7.038587 TGGTTACTAGATGAAAAGAGCCTGTAA 60.039 37.037 0.00 0.00 0.00 2.41
986 1030 6.439375 TGGTTACTAGATGAAAAGAGCCTGTA 59.561 38.462 0.00 0.00 0.00 2.74
987 1031 5.248477 TGGTTACTAGATGAAAAGAGCCTGT 59.752 40.000 0.00 0.00 0.00 4.00
988 1032 5.734720 TGGTTACTAGATGAAAAGAGCCTG 58.265 41.667 0.00 0.00 0.00 4.85
989 1033 6.374417 TTGGTTACTAGATGAAAAGAGCCT 57.626 37.500 0.00 0.00 0.00 4.58
990 1034 6.823689 TGATTGGTTACTAGATGAAAAGAGCC 59.176 38.462 0.00 0.00 0.00 4.70
991 1035 7.334421 TGTGATTGGTTACTAGATGAAAAGAGC 59.666 37.037 0.00 0.00 0.00 4.09
992 1036 8.777865 TGTGATTGGTTACTAGATGAAAAGAG 57.222 34.615 0.00 0.00 0.00 2.85
993 1037 9.567776 TTTGTGATTGGTTACTAGATGAAAAGA 57.432 29.630 0.00 0.00 0.00 2.52
994 1038 9.612620 GTTTGTGATTGGTTACTAGATGAAAAG 57.387 33.333 0.00 0.00 0.00 2.27
995 1039 9.349713 AGTTTGTGATTGGTTACTAGATGAAAA 57.650 29.630 0.00 0.00 0.00 2.29
996 1040 8.918202 AGTTTGTGATTGGTTACTAGATGAAA 57.082 30.769 0.00 0.00 0.00 2.69
997 1041 8.783093 CAAGTTTGTGATTGGTTACTAGATGAA 58.217 33.333 0.00 0.00 0.00 2.57
998 1042 7.094805 GCAAGTTTGTGATTGGTTACTAGATGA 60.095 37.037 0.00 0.00 0.00 2.92
999 1043 7.023575 GCAAGTTTGTGATTGGTTACTAGATG 58.976 38.462 0.00 0.00 0.00 2.90
1000 1044 6.151144 GGCAAGTTTGTGATTGGTTACTAGAT 59.849 38.462 0.00 0.00 0.00 1.98
1001 1045 5.472137 GGCAAGTTTGTGATTGGTTACTAGA 59.528 40.000 0.00 0.00 0.00 2.43
1002 1046 5.473504 AGGCAAGTTTGTGATTGGTTACTAG 59.526 40.000 0.00 0.00 0.00 2.57
1003 1047 5.381757 AGGCAAGTTTGTGATTGGTTACTA 58.618 37.500 0.00 0.00 0.00 1.82
1004 1048 4.215109 AGGCAAGTTTGTGATTGGTTACT 58.785 39.130 0.00 0.00 0.00 2.24
1005 1049 4.546570 GAGGCAAGTTTGTGATTGGTTAC 58.453 43.478 0.00 0.00 0.00 2.50
1006 1050 3.572255 GGAGGCAAGTTTGTGATTGGTTA 59.428 43.478 0.00 0.00 0.00 2.85
1007 1051 2.365293 GGAGGCAAGTTTGTGATTGGTT 59.635 45.455 0.00 0.00 0.00 3.67
1008 1052 1.963515 GGAGGCAAGTTTGTGATTGGT 59.036 47.619 0.00 0.00 0.00 3.67
1009 1053 1.273327 GGGAGGCAAGTTTGTGATTGG 59.727 52.381 0.00 0.00 0.00 3.16
1010 1054 1.273327 GGGGAGGCAAGTTTGTGATTG 59.727 52.381 0.00 0.00 0.00 2.67
1011 1055 1.147817 AGGGGAGGCAAGTTTGTGATT 59.852 47.619 0.00 0.00 0.00 2.57
1012 1056 0.779997 AGGGGAGGCAAGTTTGTGAT 59.220 50.000 0.00 0.00 0.00 3.06
1013 1057 0.178992 CAGGGGAGGCAAGTTTGTGA 60.179 55.000 0.00 0.00 0.00 3.58
1014 1058 0.178992 TCAGGGGAGGCAAGTTTGTG 60.179 55.000 0.00 0.00 0.00 3.33
1015 1059 0.779997 ATCAGGGGAGGCAAGTTTGT 59.220 50.000 0.00 0.00 0.00 2.83
1016 1060 1.928868 AATCAGGGGAGGCAAGTTTG 58.071 50.000 0.00 0.00 0.00 2.93
1017 1061 2.702270 AAATCAGGGGAGGCAAGTTT 57.298 45.000 0.00 0.00 0.00 2.66
1018 1062 2.158325 TGAAAATCAGGGGAGGCAAGTT 60.158 45.455 0.00 0.00 0.00 2.66
1019 1063 1.428912 TGAAAATCAGGGGAGGCAAGT 59.571 47.619 0.00 0.00 0.00 3.16
1020 1064 2.097825 CTGAAAATCAGGGGAGGCAAG 58.902 52.381 0.00 0.00 40.71 4.01
1021 1065 2.220653 CTGAAAATCAGGGGAGGCAA 57.779 50.000 0.00 0.00 40.71 4.52
1022 1066 3.985410 CTGAAAATCAGGGGAGGCA 57.015 52.632 0.00 0.00 40.71 4.75
1030 1074 1.355720 AGGACCACCCCTGAAAATCAG 59.644 52.381 0.00 0.32 43.91 2.90
1031 1075 1.455822 AGGACCACCCCTGAAAATCA 58.544 50.000 0.00 0.00 34.68 2.57
1039 1083 1.075536 GTTTCAATCAGGACCACCCCT 59.924 52.381 0.00 0.00 36.90 4.79
1040 1084 1.545841 GTTTCAATCAGGACCACCCC 58.454 55.000 0.00 0.00 36.73 4.95
1041 1085 1.165270 CGTTTCAATCAGGACCACCC 58.835 55.000 0.00 0.00 36.73 4.61
1042 1086 0.521735 GCGTTTCAATCAGGACCACC 59.478 55.000 0.00 0.00 0.00 4.61
1043 1087 1.523758 AGCGTTTCAATCAGGACCAC 58.476 50.000 0.00 0.00 0.00 4.16
1044 1088 3.270027 CATAGCGTTTCAATCAGGACCA 58.730 45.455 0.00 0.00 0.00 4.02
1045 1089 2.614057 CCATAGCGTTTCAATCAGGACC 59.386 50.000 0.00 0.00 0.00 4.46
1046 1090 3.531538 TCCATAGCGTTTCAATCAGGAC 58.468 45.455 0.00 0.00 0.00 3.85
1047 1091 3.797039 CTCCATAGCGTTTCAATCAGGA 58.203 45.455 0.00 0.00 0.00 3.86
1086 1130 5.528043 TTCAACTGCTTTAAATGAAGGCA 57.472 34.783 0.00 0.00 46.99 4.75
1171 1223 4.665833 ACAGTCTGTGCTGTTTGTACTA 57.334 40.909 4.21 0.00 46.45 1.82
1195 1252 6.994496 TGCTAGGTACTACGTACATCATTAGT 59.006 38.462 6.51 0.00 40.41 2.24
1199 1256 6.002082 TGATGCTAGGTACTACGTACATCAT 58.998 40.000 13.92 7.27 40.41 2.45
1201 1258 5.936686 TGATGCTAGGTACTACGTACATC 57.063 43.478 10.13 10.13 40.41 3.06
1202 1259 6.072064 GGAATGATGCTAGGTACTACGTACAT 60.072 42.308 6.51 1.99 40.41 2.29
1203 1260 5.240183 GGAATGATGCTAGGTACTACGTACA 59.760 44.000 6.51 0.00 40.41 2.90
1205 1262 5.240183 GTGGAATGATGCTAGGTACTACGTA 59.760 44.000 0.00 0.00 41.75 3.57
1206 1263 4.037684 GTGGAATGATGCTAGGTACTACGT 59.962 45.833 0.00 0.00 41.75 3.57
1210 1267 3.384168 TGGTGGAATGATGCTAGGTACT 58.616 45.455 0.00 0.00 46.37 2.73
1302 1614 2.567615 GAGCTCTTCCCTTGTTGTAGGA 59.432 50.000 6.43 0.00 37.50 2.94
1328 1648 2.993899 CTCTAATATTTGTAGGCGCCCG 59.006 50.000 26.15 0.00 0.00 6.13
1346 1735 2.191400 TGGATTAGTTCTGGCTGCTCT 58.809 47.619 0.00 0.00 0.00 4.09
1355 1744 8.993121 CGTATATTTGCTTCATGGATTAGTTCT 58.007 33.333 0.00 0.00 0.00 3.01
1367 1756 6.372937 TGGTCAATCAACGTATATTTGCTTCA 59.627 34.615 0.00 0.00 0.00 3.02
1374 1763 4.124238 CCGGTGGTCAATCAACGTATATT 58.876 43.478 0.00 0.00 45.39 1.28
1381 1770 1.579429 GCACCGGTGGTCAATCAAC 59.421 57.895 34.58 11.86 31.02 3.18
1422 1868 1.508808 CTAGGCGTCTCGAGGTAGGC 61.509 65.000 13.56 15.61 0.00 3.93
1621 2067 2.257207 TCTTCTTCTTCCGTGGGATGT 58.743 47.619 0.00 0.00 0.00 3.06
1701 2153 3.319198 CACCACTAGCCCACCGGT 61.319 66.667 0.00 0.00 0.00 5.28
1702 2154 4.096003 CCACCACTAGCCCACCGG 62.096 72.222 0.00 0.00 0.00 5.28
1704 2156 1.612442 TCTCCACCACTAGCCCACC 60.612 63.158 0.00 0.00 0.00 4.61
1711 2163 0.965866 CCTCAGCGTCTCCACCACTA 60.966 60.000 0.00 0.00 0.00 2.74
1712 2164 2.279069 CCTCAGCGTCTCCACCACT 61.279 63.158 0.00 0.00 0.00 4.00
1850 2302 0.532573 GCTCCTCACCATCTTCGTCA 59.467 55.000 0.00 0.00 0.00 4.35
1851 2303 0.820871 AGCTCCTCACCATCTTCGTC 59.179 55.000 0.00 0.00 0.00 4.20
1852 2304 0.534412 CAGCTCCTCACCATCTTCGT 59.466 55.000 0.00 0.00 0.00 3.85
1853 2305 0.534412 ACAGCTCCTCACCATCTTCG 59.466 55.000 0.00 0.00 0.00 3.79
1854 2306 1.406614 CCACAGCTCCTCACCATCTTC 60.407 57.143 0.00 0.00 0.00 2.87
1855 2307 0.617413 CCACAGCTCCTCACCATCTT 59.383 55.000 0.00 0.00 0.00 2.40
1856 2308 0.546267 ACCACAGCTCCTCACCATCT 60.546 55.000 0.00 0.00 0.00 2.90
1857 2309 0.392193 CACCACAGCTCCTCACCATC 60.392 60.000 0.00 0.00 0.00 3.51
1858 2310 1.681666 CACCACAGCTCCTCACCAT 59.318 57.895 0.00 0.00 0.00 3.55
1950 2402 3.795688 ACCAGGGGTTAGCATCATATG 57.204 47.619 0.00 0.00 27.29 1.78
1980 2432 2.266055 GTCTGCTCCGTTCCTGGG 59.734 66.667 0.00 0.00 0.00 4.45
2030 2482 0.392461 GCAGGGCGTCCATGAGTTTA 60.392 55.000 9.71 0.00 34.83 2.01
2388 2844 2.750888 GCAAGGCCGGTAAGCTTCG 61.751 63.158 0.00 0.40 0.00 3.79
2389 2845 1.241315 TTGCAAGGCCGGTAAGCTTC 61.241 55.000 0.00 0.00 0.00 3.86
2392 2848 0.458370 CATTTGCAAGGCCGGTAAGC 60.458 55.000 1.90 3.10 0.00 3.09
2395 2851 3.283303 GCATTTGCAAGGCCGGTA 58.717 55.556 12.66 0.00 41.59 4.02
2416 2872 6.156519 GCAATGTATGATTGTGATGATGCAT 58.843 36.000 0.00 0.00 34.66 3.96
2445 2904 3.070446 TGGAGAGCGAAGAAAGTAAACCA 59.930 43.478 0.00 0.00 0.00 3.67
2453 2912 2.876091 CATACGTGGAGAGCGAAGAAA 58.124 47.619 0.00 0.00 0.00 2.52
2455 2914 0.100682 GCATACGTGGAGAGCGAAGA 59.899 55.000 0.00 0.00 0.00 2.87
2668 3130 0.960861 GTACAAGGGAAGCTGCCACC 60.961 60.000 14.44 0.00 0.00 4.61
2671 3133 0.393132 GGAGTACAAGGGAAGCTGCC 60.393 60.000 0.16 0.16 0.00 4.85
2679 3141 4.635699 AAGTGGTAAAGGAGTACAAGGG 57.364 45.455 0.00 0.00 0.00 3.95
2715 4043 3.571571 TCTCAAGACCAAATCGTACACG 58.428 45.455 0.00 0.00 41.45 4.49
2749 4077 1.503542 CATCGTCAGGGCAACAAGC 59.496 57.895 0.00 0.00 44.65 4.01
2763 4091 3.405170 AATAAAAACCGAGCTGCATCG 57.595 42.857 1.02 8.37 42.36 3.84
2764 4092 4.732784 TGAAATAAAAACCGAGCTGCATC 58.267 39.130 1.02 0.00 0.00 3.91
2810 4138 2.878406 CCGAAACTGACACACCAAATCT 59.122 45.455 0.00 0.00 0.00 2.40
2813 4141 0.736053 GCCGAAACTGACACACCAAA 59.264 50.000 0.00 0.00 0.00 3.28
2829 4157 5.514204 CCCGTACTAAATAATATTCTCGCCG 59.486 44.000 0.00 0.00 0.00 6.46
2848 4345 2.121129 CCCTATCCTTTTGGTCCCGTA 58.879 52.381 0.00 0.00 41.38 4.02
2909 4406 1.188219 TCTGTGCTCCTGTCTGGTCC 61.188 60.000 0.00 0.00 37.07 4.46
2927 4424 6.134061 GTCGAAACACCTGACTTAAATGTTC 58.866 40.000 0.00 0.00 32.46 3.18
2948 4445 6.913132 CAGTGTAAGGTGATACTTAGATGTCG 59.087 42.308 0.00 0.00 33.87 4.35
2949 4446 6.697892 GCAGTGTAAGGTGATACTTAGATGTC 59.302 42.308 0.00 0.00 33.87 3.06
2973 4470 2.089349 GCGGACGACTCTTGACTGC 61.089 63.158 0.00 0.00 0.00 4.40
3059 4557 2.880268 TGTGAAGATGTTTCTGCCTGTG 59.120 45.455 0.00 0.00 30.72 3.66
3115 4614 3.877508 AGCTCAGTGGTAGTTTTGTGTTC 59.122 43.478 0.00 0.00 0.00 3.18
3174 4673 6.238103 CGTATCGTAGAAATCTTTTGCCATGT 60.238 38.462 0.00 0.00 43.58 3.21
3214 4713 5.337578 AGAATCTCTACCTTGCTTCAGTC 57.662 43.478 0.00 0.00 0.00 3.51
3265 4764 0.852136 GTTGTGACAAATTGTGCCGC 59.148 50.000 2.20 0.00 0.00 6.53
3266 4765 2.200792 TGTTGTGACAAATTGTGCCG 57.799 45.000 2.20 0.00 31.49 5.69
3585 5090 4.093850 GGTGTTTGTTTACTTCGACACTGT 59.906 41.667 0.00 0.00 37.93 3.55
3677 5185 0.609957 CTTCCATGGCAACTGCTGGA 60.610 55.000 6.96 8.24 41.70 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.