Multiple sequence alignment - TraesCS3D01G270000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G270000 chr3D 100.000 3234 0 0 1 3234 374686461 374689694 0.000000e+00 5973.0
1 TraesCS3D01G270000 chr3D 86.852 791 79 12 1 785 374396892 374397663 0.000000e+00 861.0
2 TraesCS3D01G270000 chr3D 79.688 576 84 14 2684 3233 29470694 29471262 5.060000e-103 385.0
3 TraesCS3D01G270000 chr3A 89.147 1336 104 24 852 2175 497453760 497455066 0.000000e+00 1626.0
4 TraesCS3D01G270000 chr3A 86.511 556 68 5 2684 3234 626727687 626727134 3.570000e-169 604.0
5 TraesCS3D01G270000 chr3A 86.348 564 60 10 2676 3229 740040761 740041317 1.660000e-167 599.0
6 TraesCS3D01G270000 chr3A 89.447 398 42 0 1 398 497207647 497208044 1.340000e-138 503.0
7 TraesCS3D01G270000 chr3A 87.186 398 51 0 1 398 497118514 497118911 1.370000e-123 453.0
8 TraesCS3D01G270000 chr3A 84.680 359 34 6 433 785 497208045 497208388 4.000000e-89 339.0
9 TraesCS3D01G270000 chr3A 83.922 255 19 9 619 857 497297796 497298044 1.170000e-54 224.0
10 TraesCS3D01G270000 chr1A 96.774 558 16 2 2677 3234 548742243 548742798 0.000000e+00 929.0
11 TraesCS3D01G270000 chr4A 96.403 556 18 2 2679 3234 34560088 34560641 0.000000e+00 915.0
12 TraesCS3D01G270000 chr3B 85.409 795 91 9 1 785 488315646 488314867 0.000000e+00 802.0
13 TraesCS3D01G270000 chr3B 82.176 432 65 10 2678 3101 479877191 479877618 8.530000e-96 361.0
14 TraesCS3D01G270000 chr4D 87.814 558 57 9 2684 3234 448174497 448173944 0.000000e+00 643.0
15 TraesCS3D01G270000 chr6B 86.572 566 61 11 2672 3228 673029276 673029835 7.670000e-171 610.0
16 TraesCS3D01G270000 chr2B 85.487 565 58 7 2688 3234 765471614 765471056 4.680000e-158 568.0
17 TraesCS3D01G270000 chr7B 79.417 583 81 21 2685 3233 731150028 731150605 3.050000e-100 375.0
18 TraesCS3D01G270000 chr7B 82.550 149 23 3 576 723 291570209 291570355 9.420000e-26 128.0
19 TraesCS3D01G270000 chr2A 80.000 485 71 20 2685 3149 584592290 584592768 5.170000e-88 335.0
20 TraesCS3D01G270000 chr2A 79.870 154 28 3 416 567 202099361 202099513 3.410000e-20 110.0
21 TraesCS3D01G270000 chr5D 83.684 190 24 4 576 763 461908413 461908597 4.290000e-39 172.0
22 TraesCS3D01G270000 chr6D 81.395 172 27 5 2303 2471 6272344 6272513 5.630000e-28 135.0
23 TraesCS3D01G270000 chr4B 84.028 144 20 3 576 718 10834947 10835088 5.630000e-28 135.0
24 TraesCS3D01G270000 chr4B 83.673 147 18 6 575 718 142913390 142913533 2.020000e-27 134.0
25 TraesCS3D01G270000 chrUn 80.435 184 26 9 582 763 176747891 176748066 7.280000e-27 132.0
26 TraesCS3D01G270000 chr2D 82.237 152 26 1 416 567 71413095 71413245 2.620000e-26 130.0
27 TraesCS3D01G270000 chr1B 79.781 183 28 8 576 755 561301928 561301752 1.220000e-24 124.0
28 TraesCS3D01G270000 chr7D 84.043 94 12 3 2532 2624 543060308 543060217 1.600000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G270000 chr3D 374686461 374689694 3233 False 5973 5973 100.0000 1 3234 1 chr3D.!!$F3 3233
1 TraesCS3D01G270000 chr3D 374396892 374397663 771 False 861 861 86.8520 1 785 1 chr3D.!!$F2 784
2 TraesCS3D01G270000 chr3D 29470694 29471262 568 False 385 385 79.6880 2684 3233 1 chr3D.!!$F1 549
3 TraesCS3D01G270000 chr3A 497453760 497455066 1306 False 1626 1626 89.1470 852 2175 1 chr3A.!!$F3 1323
4 TraesCS3D01G270000 chr3A 626727134 626727687 553 True 604 604 86.5110 2684 3234 1 chr3A.!!$R1 550
5 TraesCS3D01G270000 chr3A 740040761 740041317 556 False 599 599 86.3480 2676 3229 1 chr3A.!!$F4 553
6 TraesCS3D01G270000 chr3A 497207647 497208388 741 False 421 503 87.0635 1 785 2 chr3A.!!$F5 784
7 TraesCS3D01G270000 chr1A 548742243 548742798 555 False 929 929 96.7740 2677 3234 1 chr1A.!!$F1 557
8 TraesCS3D01G270000 chr4A 34560088 34560641 553 False 915 915 96.4030 2679 3234 1 chr4A.!!$F1 555
9 TraesCS3D01G270000 chr3B 488314867 488315646 779 True 802 802 85.4090 1 785 1 chr3B.!!$R1 784
10 TraesCS3D01G270000 chr4D 448173944 448174497 553 True 643 643 87.8140 2684 3234 1 chr4D.!!$R1 550
11 TraesCS3D01G270000 chr6B 673029276 673029835 559 False 610 610 86.5720 2672 3228 1 chr6B.!!$F1 556
12 TraesCS3D01G270000 chr2B 765471056 765471614 558 True 568 568 85.4870 2688 3234 1 chr2B.!!$R1 546
13 TraesCS3D01G270000 chr7B 731150028 731150605 577 False 375 375 79.4170 2685 3233 1 chr7B.!!$F2 548

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
757 769 0.041238 TCCCGGGTTCATCTGAGTCT 59.959 55.0 22.86 0.00 0.00 3.24 F
840 857 0.101759 TGAACGTATACGAGCCAGGC 59.898 55.0 30.77 1.84 43.02 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2016 2036 0.030638 GGTTTTGCATGACAGCGTGT 59.969 50.0 0.00 0.0 37.31 4.49 R
2401 2449 0.106469 TACCAACCAGCCTGTTGCAA 60.106 50.0 9.79 0.0 43.36 4.08 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
37 38 1.448540 CACAATCCGCCTCGAAGCT 60.449 57.895 4.21 0.00 0.00 3.74
189 191 1.531748 CCCCCTATCGCACAACCAT 59.468 57.895 0.00 0.00 0.00 3.55
198 200 1.167851 CGCACAACCATGGTCAGATT 58.832 50.000 20.07 0.00 0.00 2.40
279 281 4.953868 TGTGGCGGTCGACAACGG 62.954 66.667 18.91 4.36 40.21 4.44
314 316 2.677875 GGCTGCAACCTTCCTGGG 60.678 66.667 0.50 0.00 41.11 4.45
319 321 1.607467 GCAACCTTCCTGGGCACAT 60.607 57.895 0.00 0.00 41.11 3.21
377 379 0.394899 GGAGATTGGAGCCCAACCAG 60.395 60.000 8.59 0.00 46.95 4.00
381 383 2.085343 ATTGGAGCCCAACCAGCAGT 62.085 55.000 8.59 0.00 46.95 4.40
398 400 3.248043 GTGATTAGCACAGCCACCA 57.752 52.632 0.00 0.00 46.91 4.17
404 406 0.618680 TAGCACAGCCACCAGAGGAT 60.619 55.000 0.00 0.00 0.00 3.24
408 410 1.227380 CAGCCACCAGAGGATACGC 60.227 63.158 0.00 0.00 46.39 4.42
431 433 1.078143 CTGCCTCGGGGGAAGAAAG 60.078 63.158 1.90 0.00 43.76 2.62
439 441 1.074248 GGGGAAGAAAGGGACGCAA 59.926 57.895 0.00 0.00 0.00 4.85
453 455 0.693049 ACGCAACCAAGGGAGAGAAT 59.307 50.000 0.00 0.00 0.00 2.40
506 508 4.690719 CGGTGGTGCTTGCCGGTA 62.691 66.667 1.90 0.00 41.60 4.02
507 509 2.746277 GGTGGTGCTTGCCGGTAG 60.746 66.667 1.90 1.82 0.00 3.18
508 510 3.431725 GTGGTGCTTGCCGGTAGC 61.432 66.667 19.84 19.84 44.14 3.58
557 561 3.849951 GAGGCGGCGAAGATGGGA 61.850 66.667 12.98 0.00 0.00 4.37
677 683 4.285517 ACACACTCAGTCATCTTTCTCCAT 59.714 41.667 0.00 0.00 0.00 3.41
757 769 0.041238 TCCCGGGTTCATCTGAGTCT 59.959 55.000 22.86 0.00 0.00 3.24
763 775 2.183679 GGTTCATCTGAGTCTGGGAGT 58.816 52.381 0.00 0.00 0.00 3.85
772 789 0.616111 AGTCTGGGAGTCGCCTCATT 60.616 55.000 4.54 0.00 39.64 2.57
785 802 1.202545 GCCTCATTCCCTCTCCGTAAC 60.203 57.143 0.00 0.00 0.00 2.50
786 803 1.413077 CCTCATTCCCTCTCCGTAACC 59.587 57.143 0.00 0.00 0.00 2.85
787 804 2.389715 CTCATTCCCTCTCCGTAACCT 58.610 52.381 0.00 0.00 0.00 3.50
788 805 3.563223 CTCATTCCCTCTCCGTAACCTA 58.437 50.000 0.00 0.00 0.00 3.08
789 806 4.153411 CTCATTCCCTCTCCGTAACCTAT 58.847 47.826 0.00 0.00 0.00 2.57
790 807 4.553678 TCATTCCCTCTCCGTAACCTATT 58.446 43.478 0.00 0.00 0.00 1.73
791 808 4.344102 TCATTCCCTCTCCGTAACCTATTG 59.656 45.833 0.00 0.00 0.00 1.90
792 809 2.674420 TCCCTCTCCGTAACCTATTGG 58.326 52.381 0.00 0.00 39.83 3.16
793 810 2.245546 TCCCTCTCCGTAACCTATTGGA 59.754 50.000 0.00 0.00 37.04 3.53
794 811 3.116862 TCCCTCTCCGTAACCTATTGGAT 60.117 47.826 0.00 0.00 37.04 3.41
795 812 3.006967 CCCTCTCCGTAACCTATTGGATG 59.993 52.174 0.00 0.00 37.04 3.51
796 813 3.641906 CCTCTCCGTAACCTATTGGATGT 59.358 47.826 0.00 0.00 37.04 3.06
797 814 4.101119 CCTCTCCGTAACCTATTGGATGTT 59.899 45.833 0.00 0.00 37.04 2.71
798 815 5.018539 TCTCCGTAACCTATTGGATGTTG 57.981 43.478 0.00 0.00 37.04 3.33
799 816 4.712829 TCTCCGTAACCTATTGGATGTTGA 59.287 41.667 0.00 0.00 37.04 3.18
800 817 4.761975 TCCGTAACCTATTGGATGTTGAC 58.238 43.478 0.00 0.00 37.04 3.18
801 818 3.875134 CCGTAACCTATTGGATGTTGACC 59.125 47.826 0.00 0.00 37.04 4.02
802 819 3.875134 CGTAACCTATTGGATGTTGACCC 59.125 47.826 0.00 0.00 37.04 4.46
803 820 3.382083 AACCTATTGGATGTTGACCCC 57.618 47.619 0.00 0.00 37.04 4.95
804 821 2.573463 ACCTATTGGATGTTGACCCCT 58.427 47.619 0.00 0.00 37.04 4.79
805 822 2.926329 ACCTATTGGATGTTGACCCCTT 59.074 45.455 0.00 0.00 37.04 3.95
806 823 3.290710 CCTATTGGATGTTGACCCCTTG 58.709 50.000 0.00 0.00 34.57 3.61
807 824 2.236489 ATTGGATGTTGACCCCTTGG 57.764 50.000 0.00 0.00 37.80 3.61
819 836 3.222855 CCTTGGGCACGGCAACAA 61.223 61.111 0.00 0.00 0.00 2.83
820 837 2.027460 CTTGGGCACGGCAACAAC 59.973 61.111 0.00 0.00 0.00 3.32
821 838 2.441164 TTGGGCACGGCAACAACT 60.441 55.556 0.00 0.00 0.00 3.16
822 839 2.682256 CTTGGGCACGGCAACAACTG 62.682 60.000 0.00 0.00 0.00 3.16
823 840 2.904866 GGGCACGGCAACAACTGA 60.905 61.111 0.00 0.00 0.00 3.41
824 841 2.485795 GGGCACGGCAACAACTGAA 61.486 57.895 0.00 0.00 0.00 3.02
825 842 1.299089 GGCACGGCAACAACTGAAC 60.299 57.895 0.00 0.00 0.00 3.18
826 843 1.654137 GCACGGCAACAACTGAACG 60.654 57.895 0.00 0.00 34.35 3.95
827 844 1.719117 CACGGCAACAACTGAACGT 59.281 52.632 0.00 0.00 39.70 3.99
828 845 0.931702 CACGGCAACAACTGAACGTA 59.068 50.000 0.00 0.00 37.86 3.57
829 846 1.529438 CACGGCAACAACTGAACGTAT 59.471 47.619 0.00 0.00 37.86 3.06
830 847 2.732500 CACGGCAACAACTGAACGTATA 59.267 45.455 0.00 0.00 37.86 1.47
831 848 2.733026 ACGGCAACAACTGAACGTATAC 59.267 45.455 0.00 0.00 38.07 1.47
832 849 2.222420 CGGCAACAACTGAACGTATACG 60.222 50.000 23.24 23.24 46.33 3.06
833 850 2.988493 GGCAACAACTGAACGTATACGA 59.012 45.455 30.77 8.60 43.02 3.43
834 851 3.060363 GGCAACAACTGAACGTATACGAG 59.940 47.826 30.77 19.60 43.02 4.18
835 852 3.481467 GCAACAACTGAACGTATACGAGC 60.481 47.826 30.77 20.57 43.02 5.03
836 853 2.872370 ACAACTGAACGTATACGAGCC 58.128 47.619 30.77 18.01 43.02 4.70
837 854 2.229543 ACAACTGAACGTATACGAGCCA 59.770 45.455 30.77 21.03 43.02 4.75
838 855 2.846039 ACTGAACGTATACGAGCCAG 57.154 50.000 30.77 28.59 43.02 4.85
839 856 1.404391 ACTGAACGTATACGAGCCAGG 59.596 52.381 30.77 16.33 43.02 4.45
840 857 0.101759 TGAACGTATACGAGCCAGGC 59.898 55.000 30.77 1.84 43.02 4.85
841 858 0.384669 GAACGTATACGAGCCAGGCT 59.615 55.000 30.77 16.12 43.88 4.58
842 859 0.102481 AACGTATACGAGCCAGGCTG 59.898 55.000 30.77 13.98 39.88 4.85
843 860 1.007271 CGTATACGAGCCAGGCTGG 60.007 63.158 29.44 29.44 39.88 4.85
844 861 1.367840 GTATACGAGCCAGGCTGGG 59.632 63.158 33.43 19.95 39.88 4.45
857 874 1.614711 GCTGGGTTCCCATCCATCA 59.385 57.895 11.26 0.00 35.33 3.07
871 888 4.439153 CCATCCATCAAACAATCAGTTCGG 60.439 45.833 0.00 0.00 40.26 4.30
888 905 2.106683 GGACGGGACAAGGAATGCG 61.107 63.158 0.00 0.00 0.00 4.73
897 914 2.749621 GACAAGGAATGCGAATGGAGTT 59.250 45.455 0.00 0.00 0.00 3.01
909 926 1.656652 ATGGAGTTCGGCTTCATTCG 58.343 50.000 0.00 0.00 40.48 3.34
918 935 1.450531 GGCTTCATTCGGCATCCAGG 61.451 60.000 0.00 0.00 0.00 4.45
921 938 0.461870 TTCATTCGGCATCCAGGTCG 60.462 55.000 0.00 0.00 37.19 4.79
962 979 1.068472 CGACAGCGTTCCTCTGTACTT 60.068 52.381 0.00 0.00 44.09 2.24
963 980 2.329379 GACAGCGTTCCTCTGTACTTG 58.671 52.381 0.00 0.00 44.09 3.16
964 981 1.071605 CAGCGTTCCTCTGTACTTGC 58.928 55.000 0.00 0.00 0.00 4.01
965 982 0.388649 AGCGTTCCTCTGTACTTGCG 60.389 55.000 0.00 0.00 0.00 4.85
966 983 0.388134 GCGTTCCTCTGTACTTGCGA 60.388 55.000 0.00 0.00 0.00 5.10
967 984 1.618861 CGTTCCTCTGTACTTGCGAG 58.381 55.000 0.00 0.00 0.00 5.03
968 985 1.068472 CGTTCCTCTGTACTTGCGAGT 60.068 52.381 12.27 12.27 39.97 4.18
969 986 2.607282 CGTTCCTCTGTACTTGCGAGTT 60.607 50.000 12.97 0.00 37.33 3.01
970 987 2.987821 GTTCCTCTGTACTTGCGAGTTC 59.012 50.000 12.97 7.94 37.33 3.01
971 988 2.235891 TCCTCTGTACTTGCGAGTTCA 58.764 47.619 12.97 12.62 37.33 3.18
972 989 2.626266 TCCTCTGTACTTGCGAGTTCAA 59.374 45.455 12.97 4.04 37.33 2.69
973 990 3.258372 TCCTCTGTACTTGCGAGTTCAAT 59.742 43.478 12.97 0.00 37.33 2.57
974 991 3.997021 CCTCTGTACTTGCGAGTTCAATT 59.003 43.478 12.97 0.00 37.33 2.32
975 992 5.047590 TCCTCTGTACTTGCGAGTTCAATTA 60.048 40.000 12.97 1.42 37.33 1.40
976 993 5.812642 CCTCTGTACTTGCGAGTTCAATTAT 59.187 40.000 12.97 0.00 37.33 1.28
977 994 6.237942 CCTCTGTACTTGCGAGTTCAATTATG 60.238 42.308 12.97 1.41 37.33 1.90
1031 1048 1.419387 AGATAGCCAGCCAACCTCATC 59.581 52.381 0.00 0.00 0.00 2.92
1042 1059 5.413833 CAGCCAACCTCATCATATTCATACC 59.586 44.000 0.00 0.00 0.00 2.73
1071 1088 2.600731 GATCGATCCAAGCCTCATACG 58.399 52.381 14.76 0.00 0.00 3.06
1078 1095 1.068588 CCAAGCCTCATACGATCCGAA 59.931 52.381 0.00 0.00 0.00 4.30
1086 1103 4.022762 CCTCATACGATCCGAATTGTCTCT 60.023 45.833 0.00 0.00 31.65 3.10
1087 1104 5.109662 TCATACGATCCGAATTGTCTCTC 57.890 43.478 0.00 0.00 31.65 3.20
1088 1105 2.476873 ACGATCCGAATTGTCTCTCG 57.523 50.000 0.00 0.00 34.83 4.04
1092 1109 4.478195 CGAATTGTCTCTCGGCGT 57.522 55.556 6.85 0.00 0.00 5.68
1093 1110 2.279469 CGAATTGTCTCTCGGCGTC 58.721 57.895 6.85 0.00 0.00 5.19
1094 1111 1.464429 CGAATTGTCTCTCGGCGTCG 61.464 60.000 1.15 1.15 37.82 5.12
1096 1113 3.701604 ATTGTCTCTCGGCGTCGGC 62.702 63.158 10.62 9.07 36.95 5.54
1124 1141 0.458889 CGCCGACTTAATTCCACCGA 60.459 55.000 0.00 0.00 0.00 4.69
1148 1165 0.109272 TCGAGACCATGTGCTTCGTC 60.109 55.000 0.00 0.00 0.00 4.20
1163 1180 2.635338 GTCGACGGCCAAACAACC 59.365 61.111 2.24 0.00 0.00 3.77
1166 1183 1.890041 CGACGGCCAAACAACCAGA 60.890 57.895 2.24 0.00 0.00 3.86
1169 1186 2.919494 CGGCCAAACAACCAGAGCC 61.919 63.158 2.24 0.00 37.03 4.70
1201 1218 4.175489 GCTCATGCTGGCTGTGCG 62.175 66.667 0.00 0.00 36.03 5.34
1386 1406 1.830145 CCGGACTGGATACCCAAGG 59.170 63.158 0.00 0.00 42.98 3.61
1388 1408 0.464452 CGGACTGGATACCCAAGGTC 59.536 60.000 0.00 0.00 42.98 3.85
1398 1418 2.269241 CCAAGGTCCTTCTCCCGC 59.731 66.667 0.00 0.00 0.00 6.13
1425 1445 0.944311 ACTGTGCGCTGACTTAACCG 60.944 55.000 9.73 0.00 0.00 4.44
1470 1490 0.733223 GACGAAGAGCGACCTTGACC 60.733 60.000 0.00 0.00 44.57 4.02
1487 1507 0.834687 ACCCTCAGCAGAACCGGTTA 60.835 55.000 22.33 1.80 0.00 2.85
1532 1552 0.324830 GGCTACTCCCACTCCTCACT 60.325 60.000 0.00 0.00 0.00 3.41
1536 1556 0.896019 ACTCCCACTCCTCACTGACG 60.896 60.000 0.00 0.00 0.00 4.35
1538 1558 0.894184 TCCCACTCCTCACTGACGAC 60.894 60.000 0.00 0.00 0.00 4.34
1564 1584 2.043625 CGGCCGCCAACCTACTATA 58.956 57.895 14.67 0.00 0.00 1.31
1567 1587 0.670162 GCCGCCAACCTACTATACGA 59.330 55.000 0.00 0.00 0.00 3.43
1578 1598 0.179156 ACTATACGACCAACCACGCG 60.179 55.000 3.53 3.53 0.00 6.01
1595 1615 2.380410 CGTTCGAAGGGCAAGTCCG 61.380 63.158 9.98 0.00 34.94 4.79
1597 1617 0.391263 GTTCGAAGGGCAAGTCCGAT 60.391 55.000 0.00 0.00 34.94 4.18
1620 1640 4.813526 CGCCAGAGGACGACGACG 62.814 72.222 5.58 5.58 45.75 5.12
1642 1662 1.230281 TGCAGGGGAGGAAGGGAAT 60.230 57.895 0.00 0.00 0.00 3.01
1651 1671 1.843206 GAGGAAGGGAATGAAGAGGCT 59.157 52.381 0.00 0.00 0.00 4.58
1715 1735 1.202510 AGCAACCTGAGCATCGAGATC 60.203 52.381 0.00 0.00 38.61 2.75
1717 1737 2.897436 CAACCTGAGCATCGAGATCAA 58.103 47.619 0.00 0.00 43.01 2.57
1850 1870 0.750911 GGGCATTCAAGCAGAGGGAG 60.751 60.000 0.00 0.00 35.83 4.30
1907 1927 2.096174 CCCGCTCTATATCGTGCTAGTC 59.904 54.545 0.00 0.00 0.00 2.59
1917 1937 6.795098 ATATCGTGCTAGTCAACAAACAAA 57.205 33.333 0.00 0.00 0.00 2.83
1928 1948 2.003443 CAAACAAACACGGCGAGCG 61.003 57.895 16.62 3.73 0.00 5.03
1993 2013 4.312231 CATGCCGGCGCCGTAATG 62.312 66.667 43.12 37.35 37.81 1.90
2000 2020 3.925238 GCGCCGTAATGCAGGACG 61.925 66.667 14.51 14.51 38.79 4.79
2006 2026 1.421410 CGTAATGCAGGACGCTGGTC 61.421 60.000 9.88 0.00 43.06 4.02
2014 2034 4.664677 GACGCTGGTCCGCACAGT 62.665 66.667 6.53 0.00 38.22 3.55
2015 2035 3.277211 GACGCTGGTCCGCACAGTA 62.277 63.158 6.53 0.00 38.22 2.74
2016 2036 2.048597 CGCTGGTCCGCACAGTAA 60.049 61.111 6.53 0.00 38.22 2.24
2017 2037 2.380410 CGCTGGTCCGCACAGTAAC 61.380 63.158 6.53 0.00 38.22 2.50
2018 2038 1.301401 GCTGGTCCGCACAGTAACA 60.301 57.895 0.00 0.00 38.22 2.41
2019 2039 1.566018 GCTGGTCCGCACAGTAACAC 61.566 60.000 0.00 0.00 38.22 3.32
2020 2040 1.282248 CTGGTCCGCACAGTAACACG 61.282 60.000 0.00 0.00 0.00 4.49
2021 2041 2.664436 GGTCCGCACAGTAACACGC 61.664 63.158 0.00 0.00 0.00 5.34
2022 2042 1.663702 GTCCGCACAGTAACACGCT 60.664 57.895 0.00 0.00 0.00 5.07
2023 2043 1.663388 TCCGCACAGTAACACGCTG 60.663 57.895 0.00 0.00 39.67 5.18
2024 2044 1.954146 CCGCACAGTAACACGCTGT 60.954 57.895 0.00 0.00 46.86 4.40
2025 2045 1.487231 CGCACAGTAACACGCTGTC 59.513 57.895 0.00 0.00 44.43 3.51
2026 2046 1.212455 CGCACAGTAACACGCTGTCA 61.212 55.000 0.00 0.00 44.43 3.58
2027 2047 1.148310 GCACAGTAACACGCTGTCAT 58.852 50.000 0.00 0.00 44.43 3.06
2028 2048 1.136252 GCACAGTAACACGCTGTCATG 60.136 52.381 0.00 0.00 44.43 3.07
2029 2049 1.136252 CACAGTAACACGCTGTCATGC 60.136 52.381 0.00 0.00 44.43 4.06
2030 2050 1.147473 CAGTAACACGCTGTCATGCA 58.853 50.000 0.00 0.00 0.00 3.96
2031 2051 1.530720 CAGTAACACGCTGTCATGCAA 59.469 47.619 0.00 0.00 0.00 4.08
2032 2052 2.032117 CAGTAACACGCTGTCATGCAAA 60.032 45.455 0.00 0.00 0.00 3.68
2033 2053 2.616376 AGTAACACGCTGTCATGCAAAA 59.384 40.909 0.00 0.00 0.00 2.44
2034 2054 1.838913 AACACGCTGTCATGCAAAAC 58.161 45.000 0.00 0.00 0.00 2.43
2035 2055 0.030638 ACACGCTGTCATGCAAAACC 59.969 50.000 0.00 0.00 0.00 3.27
2036 2056 0.311790 CACGCTGTCATGCAAAACCT 59.688 50.000 0.00 0.00 0.00 3.50
2037 2057 1.032014 ACGCTGTCATGCAAAACCTT 58.968 45.000 0.00 0.00 0.00 3.50
2066 2086 6.884280 TTTCTTTTCTGATCAGGACTTTCC 57.116 37.500 22.42 0.00 36.58 3.13
2071 2091 4.543590 TCTGATCAGGACTTTCCAGAAC 57.456 45.455 22.42 0.00 39.61 3.01
2073 2093 2.305927 TGATCAGGACTTTCCAGAACCC 59.694 50.000 0.00 0.00 39.61 4.11
2108 2156 1.855360 CAGTATCGAGCCGAAAAGAGC 59.145 52.381 1.44 0.00 39.99 4.09
2115 2163 2.079925 GAGCCGAAAAGAGCTGTCAAT 58.920 47.619 0.00 0.00 40.11 2.57
2148 2196 3.241067 TGTAATACGCTCAGTTCCACC 57.759 47.619 0.00 0.00 0.00 4.61
2149 2197 2.829720 TGTAATACGCTCAGTTCCACCT 59.170 45.455 0.00 0.00 0.00 4.00
2150 2198 3.259876 TGTAATACGCTCAGTTCCACCTT 59.740 43.478 0.00 0.00 0.00 3.50
2199 2247 6.935741 TTTTTCTATTACCATGCACGCTAT 57.064 33.333 0.00 0.00 0.00 2.97
2201 2249 8.439993 TTTTTCTATTACCATGCACGCTATAA 57.560 30.769 0.00 0.00 0.00 0.98
2202 2250 8.439993 TTTTCTATTACCATGCACGCTATAAA 57.560 30.769 0.00 0.00 0.00 1.40
2203 2251 8.615878 TTTCTATTACCATGCACGCTATAAAT 57.384 30.769 0.00 0.00 0.00 1.40
2204 2252 7.595311 TCTATTACCATGCACGCTATAAATG 57.405 36.000 0.00 0.00 0.00 2.32
2205 2253 7.158697 TCTATTACCATGCACGCTATAAATGT 58.841 34.615 0.00 0.00 0.00 2.71
2206 2254 8.308207 TCTATTACCATGCACGCTATAAATGTA 58.692 33.333 0.00 0.00 0.00 2.29
2207 2255 6.533819 TTACCATGCACGCTATAAATGTAC 57.466 37.500 0.00 0.00 0.00 2.90
2208 2256 3.813166 ACCATGCACGCTATAAATGTACC 59.187 43.478 0.00 0.00 0.00 3.34
2209 2257 3.188460 CCATGCACGCTATAAATGTACCC 59.812 47.826 0.00 0.00 0.00 3.69
2210 2258 3.830744 TGCACGCTATAAATGTACCCT 57.169 42.857 0.00 0.00 0.00 4.34
2211 2259 4.940905 TGCACGCTATAAATGTACCCTA 57.059 40.909 0.00 0.00 0.00 3.53
2212 2260 5.279255 TGCACGCTATAAATGTACCCTAA 57.721 39.130 0.00 0.00 0.00 2.69
2213 2261 5.672503 TGCACGCTATAAATGTACCCTAAA 58.327 37.500 0.00 0.00 0.00 1.85
2214 2262 6.114089 TGCACGCTATAAATGTACCCTAAAA 58.886 36.000 0.00 0.00 0.00 1.52
2215 2263 6.598457 TGCACGCTATAAATGTACCCTAAAAA 59.402 34.615 0.00 0.00 0.00 1.94
2252 2300 8.644318 AAGTGTAATAAATCACCATACGAGTC 57.356 34.615 0.00 0.00 35.45 3.36
2253 2301 7.778083 AGTGTAATAAATCACCATACGAGTCA 58.222 34.615 0.00 0.00 35.45 3.41
2254 2302 8.421784 AGTGTAATAAATCACCATACGAGTCAT 58.578 33.333 0.00 0.00 35.45 3.06
2255 2303 8.700644 GTGTAATAAATCACCATACGAGTCATC 58.299 37.037 0.00 0.00 0.00 2.92
2265 2313 3.955291 CGAGTCATCGCTTGGAGAT 57.045 52.632 0.00 0.00 42.97 2.75
2266 2314 1.764851 CGAGTCATCGCTTGGAGATC 58.235 55.000 0.00 0.00 42.97 2.75
2267 2315 1.336440 CGAGTCATCGCTTGGAGATCT 59.664 52.381 0.00 0.00 42.97 2.75
2268 2316 2.741612 GAGTCATCGCTTGGAGATCTG 58.258 52.381 0.00 0.00 0.00 2.90
2269 2317 2.100584 GAGTCATCGCTTGGAGATCTGT 59.899 50.000 0.00 0.00 0.00 3.41
2270 2318 2.159128 AGTCATCGCTTGGAGATCTGTG 60.159 50.000 0.00 0.00 0.00 3.66
2271 2319 1.827344 TCATCGCTTGGAGATCTGTGT 59.173 47.619 0.00 0.00 0.00 3.72
2272 2320 2.159184 TCATCGCTTGGAGATCTGTGTC 60.159 50.000 0.00 0.00 0.00 3.67
2273 2321 1.256812 TCGCTTGGAGATCTGTGTCA 58.743 50.000 0.00 0.00 0.00 3.58
2274 2322 1.827344 TCGCTTGGAGATCTGTGTCAT 59.173 47.619 0.00 0.00 0.00 3.06
2275 2323 1.931841 CGCTTGGAGATCTGTGTCATG 59.068 52.381 0.00 0.00 0.00 3.07
2276 2324 1.669779 GCTTGGAGATCTGTGTCATGC 59.330 52.381 0.00 3.81 0.00 4.06
2277 2325 2.680221 GCTTGGAGATCTGTGTCATGCT 60.680 50.000 0.00 0.00 0.00 3.79
2278 2326 3.607741 CTTGGAGATCTGTGTCATGCTT 58.392 45.455 0.00 0.00 0.00 3.91
2279 2327 3.708403 TGGAGATCTGTGTCATGCTTT 57.292 42.857 0.00 0.00 0.00 3.51
2280 2328 4.025040 TGGAGATCTGTGTCATGCTTTT 57.975 40.909 0.00 0.00 0.00 2.27
2281 2329 4.401022 TGGAGATCTGTGTCATGCTTTTT 58.599 39.130 0.00 0.00 0.00 1.94
2282 2330 5.559770 TGGAGATCTGTGTCATGCTTTTTA 58.440 37.500 0.00 0.00 0.00 1.52
2283 2331 6.003326 TGGAGATCTGTGTCATGCTTTTTAA 58.997 36.000 0.00 0.00 0.00 1.52
2284 2332 6.660521 TGGAGATCTGTGTCATGCTTTTTAAT 59.339 34.615 0.00 0.00 0.00 1.40
2285 2333 6.971184 GGAGATCTGTGTCATGCTTTTTAATG 59.029 38.462 0.00 0.00 0.00 1.90
2286 2334 7.362401 GGAGATCTGTGTCATGCTTTTTAATGT 60.362 37.037 0.00 0.00 0.00 2.71
2287 2335 7.889469 AGATCTGTGTCATGCTTTTTAATGTT 58.111 30.769 0.00 0.00 0.00 2.71
2288 2336 8.362639 AGATCTGTGTCATGCTTTTTAATGTTT 58.637 29.630 0.00 0.00 0.00 2.83
2289 2337 7.697352 TCTGTGTCATGCTTTTTAATGTTTG 57.303 32.000 0.00 0.00 0.00 2.93
2290 2338 6.700960 TCTGTGTCATGCTTTTTAATGTTTGG 59.299 34.615 0.00 0.00 0.00 3.28
2291 2339 5.757320 TGTGTCATGCTTTTTAATGTTTGGG 59.243 36.000 0.00 0.00 0.00 4.12
2292 2340 5.757808 GTGTCATGCTTTTTAATGTTTGGGT 59.242 36.000 0.00 0.00 0.00 4.51
2293 2341 5.757320 TGTCATGCTTTTTAATGTTTGGGTG 59.243 36.000 0.00 0.00 0.00 4.61
2294 2342 5.988561 GTCATGCTTTTTAATGTTTGGGTGA 59.011 36.000 0.00 0.00 0.00 4.02
2295 2343 5.988561 TCATGCTTTTTAATGTTTGGGTGAC 59.011 36.000 0.00 0.00 0.00 3.67
2296 2344 4.363999 TGCTTTTTAATGTTTGGGTGACG 58.636 39.130 0.00 0.00 0.00 4.35
2297 2345 3.183574 GCTTTTTAATGTTTGGGTGACGC 59.816 43.478 0.00 0.00 0.00 5.19
2298 2346 4.616953 CTTTTTAATGTTTGGGTGACGCT 58.383 39.130 0.31 0.00 0.00 5.07
2299 2347 5.764131 CTTTTTAATGTTTGGGTGACGCTA 58.236 37.500 0.31 0.00 0.00 4.26
2300 2348 4.752661 TTTAATGTTTGGGTGACGCTAC 57.247 40.909 0.31 0.20 0.00 3.58
2301 2349 1.153353 AATGTTTGGGTGACGCTACG 58.847 50.000 0.31 0.00 0.00 3.51
2302 2350 0.319083 ATGTTTGGGTGACGCTACGA 59.681 50.000 0.31 0.00 0.00 3.43
2303 2351 0.598158 TGTTTGGGTGACGCTACGAC 60.598 55.000 0.31 0.00 0.00 4.34
2304 2352 1.372004 TTTGGGTGACGCTACGACG 60.372 57.895 0.31 0.00 39.50 5.12
2305 2353 3.902162 TTGGGTGACGCTACGACGC 62.902 63.158 0.31 0.00 36.19 5.19
2326 2374 2.817834 CGCCGGCGGATGAAAGAA 60.818 61.111 40.50 0.00 35.56 2.52
2327 2375 2.395360 CGCCGGCGGATGAAAGAAA 61.395 57.895 40.50 0.00 35.56 2.52
2328 2376 1.880186 GCCGGCGGATGAAAGAAAA 59.120 52.632 33.44 0.00 0.00 2.29
2329 2377 0.456142 GCCGGCGGATGAAAGAAAAC 60.456 55.000 33.44 2.51 0.00 2.43
2330 2378 0.878416 CCGGCGGATGAAAGAAAACA 59.122 50.000 24.41 0.00 0.00 2.83
2331 2379 1.472480 CCGGCGGATGAAAGAAAACAT 59.528 47.619 24.41 0.00 0.00 2.71
2332 2380 2.477863 CCGGCGGATGAAAGAAAACATC 60.478 50.000 24.41 0.00 41.18 3.06
2333 2381 2.161410 CGGCGGATGAAAGAAAACATCA 59.839 45.455 0.00 0.00 42.95 3.07
2334 2382 3.728864 CGGCGGATGAAAGAAAACATCAG 60.729 47.826 0.00 0.00 42.95 2.90
2336 2384 3.762779 CGGATGAAAGAAAACATCAGCC 58.237 45.455 0.00 0.00 44.21 4.85
2337 2385 3.428045 CGGATGAAAGAAAACATCAGCCC 60.428 47.826 0.00 0.00 44.69 5.19
2338 2386 3.118992 GGATGAAAGAAAACATCAGCCCC 60.119 47.826 0.00 0.00 42.39 5.80
2339 2387 2.247358 TGAAAGAAAACATCAGCCCCC 58.753 47.619 0.00 0.00 0.00 5.40
2340 2388 2.158325 TGAAAGAAAACATCAGCCCCCT 60.158 45.455 0.00 0.00 0.00 4.79
2341 2389 2.222227 AAGAAAACATCAGCCCCCTC 57.778 50.000 0.00 0.00 0.00 4.30
2342 2390 0.332972 AGAAAACATCAGCCCCCTCC 59.667 55.000 0.00 0.00 0.00 4.30
2343 2391 1.000896 AAAACATCAGCCCCCTCCG 60.001 57.895 0.00 0.00 0.00 4.63
2344 2392 1.497309 AAAACATCAGCCCCCTCCGA 61.497 55.000 0.00 0.00 0.00 4.55
2345 2393 1.915078 AAACATCAGCCCCCTCCGAG 61.915 60.000 0.00 0.00 0.00 4.63
2346 2394 3.554342 CATCAGCCCCCTCCGAGG 61.554 72.222 7.56 7.56 34.30 4.63
2355 2403 2.919856 CCTCCGAGGCCATCCGAT 60.920 66.667 5.01 0.00 37.47 4.18
2356 2404 2.511452 CCTCCGAGGCCATCCGATT 61.511 63.158 5.01 0.00 37.47 3.34
2357 2405 1.301244 CTCCGAGGCCATCCGATTG 60.301 63.158 5.01 0.00 37.47 2.67
2358 2406 1.748329 CTCCGAGGCCATCCGATTGA 61.748 60.000 5.01 0.00 37.47 2.57
2359 2407 1.595382 CCGAGGCCATCCGATTGAC 60.595 63.158 5.01 0.00 37.47 3.18
2360 2408 1.951130 CGAGGCCATCCGATTGACG 60.951 63.158 5.01 0.00 42.18 4.35
2361 2409 2.203070 AGGCCATCCGATTGACGC 60.203 61.111 5.01 0.00 41.07 5.19
2362 2410 2.513666 GGCCATCCGATTGACGCA 60.514 61.111 0.00 0.00 41.07 5.24
2363 2411 2.112198 GGCCATCCGATTGACGCAA 61.112 57.895 0.00 0.00 41.07 4.85
2364 2412 1.653094 GGCCATCCGATTGACGCAAA 61.653 55.000 0.00 0.00 41.07 3.68
2365 2413 0.170116 GCCATCCGATTGACGCAAAA 59.830 50.000 0.00 0.00 41.07 2.44
2366 2414 1.202290 GCCATCCGATTGACGCAAAAT 60.202 47.619 0.00 0.00 41.07 1.82
2367 2415 2.032799 GCCATCCGATTGACGCAAAATA 59.967 45.455 0.00 0.00 41.07 1.40
2368 2416 3.849645 GCCATCCGATTGACGCAAAATAG 60.850 47.826 0.00 0.00 41.07 1.73
2369 2417 3.291585 CATCCGATTGACGCAAAATAGC 58.708 45.455 0.00 0.00 41.07 2.97
2370 2418 1.668751 TCCGATTGACGCAAAATAGCC 59.331 47.619 0.00 0.00 41.07 3.93
2371 2419 1.594518 CCGATTGACGCAAAATAGCCG 60.595 52.381 0.00 0.00 41.07 5.52
2372 2420 1.062002 CGATTGACGCAAAATAGCCGT 59.938 47.619 0.00 0.00 34.51 5.68
2373 2421 2.705154 GATTGACGCAAAATAGCCGTC 58.295 47.619 5.55 5.55 38.01 4.79
2374 2422 1.514003 TTGACGCAAAATAGCCGTCA 58.486 45.000 10.55 10.55 42.06 4.35
2375 2423 1.075542 TGACGCAAAATAGCCGTCAG 58.924 50.000 10.55 0.00 40.40 3.51
2376 2424 1.337354 TGACGCAAAATAGCCGTCAGA 60.337 47.619 10.55 0.00 40.40 3.27
2377 2425 1.933853 GACGCAAAATAGCCGTCAGAT 59.066 47.619 7.44 0.00 37.70 2.90
2378 2426 1.933853 ACGCAAAATAGCCGTCAGATC 59.066 47.619 0.00 0.00 0.00 2.75
2379 2427 1.261619 CGCAAAATAGCCGTCAGATCC 59.738 52.381 0.00 0.00 0.00 3.36
2380 2428 1.604278 GCAAAATAGCCGTCAGATCCC 59.396 52.381 0.00 0.00 0.00 3.85
2381 2429 2.222027 CAAAATAGCCGTCAGATCCCC 58.778 52.381 0.00 0.00 0.00 4.81
2382 2430 0.765510 AAATAGCCGTCAGATCCCCC 59.234 55.000 0.00 0.00 0.00 5.40
2383 2431 0.399949 AATAGCCGTCAGATCCCCCA 60.400 55.000 0.00 0.00 0.00 4.96
2384 2432 0.399949 ATAGCCGTCAGATCCCCCAA 60.400 55.000 0.00 0.00 0.00 4.12
2385 2433 0.619255 TAGCCGTCAGATCCCCCAAA 60.619 55.000 0.00 0.00 0.00 3.28
2386 2434 1.452108 GCCGTCAGATCCCCCAAAG 60.452 63.158 0.00 0.00 0.00 2.77
2387 2435 1.224592 CCGTCAGATCCCCCAAAGG 59.775 63.158 0.00 0.00 0.00 3.11
2388 2436 1.562672 CCGTCAGATCCCCCAAAGGT 61.563 60.000 0.00 0.00 0.00 3.50
2389 2437 0.392998 CGTCAGATCCCCCAAAGGTG 60.393 60.000 0.00 0.00 0.00 4.00
2390 2438 0.698818 GTCAGATCCCCCAAAGGTGT 59.301 55.000 0.00 0.00 0.00 4.16
2391 2439 0.698238 TCAGATCCCCCAAAGGTGTG 59.302 55.000 0.00 0.00 0.00 3.82
2392 2440 0.967380 CAGATCCCCCAAAGGTGTGC 60.967 60.000 0.00 0.00 0.00 4.57
2393 2441 2.035626 ATCCCCCAAAGGTGTGCG 59.964 61.111 0.00 0.00 0.00 5.34
2394 2442 4.966787 TCCCCCAAAGGTGTGCGC 62.967 66.667 0.00 0.00 0.00 6.09
2398 2446 4.326766 CCAAAGGTGTGCGCCGTG 62.327 66.667 4.18 0.00 0.00 4.94
2399 2447 3.276091 CAAAGGTGTGCGCCGTGA 61.276 61.111 4.18 0.00 0.00 4.35
2400 2448 2.515057 AAAGGTGTGCGCCGTGAA 60.515 55.556 4.18 0.00 0.00 3.18
2401 2449 1.896660 AAAGGTGTGCGCCGTGAAT 60.897 52.632 4.18 0.00 0.00 2.57
2402 2450 1.452145 AAAGGTGTGCGCCGTGAATT 61.452 50.000 4.18 0.00 0.00 2.17
2403 2451 2.126888 GGTGTGCGCCGTGAATTG 60.127 61.111 4.18 0.00 0.00 2.32
2404 2452 2.800746 GTGTGCGCCGTGAATTGC 60.801 61.111 4.18 0.00 0.00 3.56
2405 2453 3.282920 TGTGCGCCGTGAATTGCA 61.283 55.556 4.18 0.00 34.44 4.08
2406 2454 2.050533 GTGCGCCGTGAATTGCAA 60.051 55.556 4.18 0.00 39.34 4.08
2407 2455 2.050533 TGCGCCGTGAATTGCAAC 60.051 55.556 4.18 0.00 33.80 4.17
2408 2456 2.050533 GCGCCGTGAATTGCAACA 60.051 55.556 0.00 0.00 0.00 3.33
2409 2457 2.082366 GCGCCGTGAATTGCAACAG 61.082 57.895 0.00 0.00 0.00 3.16
2410 2458 1.442520 CGCCGTGAATTGCAACAGG 60.443 57.895 0.00 1.71 0.00 4.00
2411 2459 1.734117 GCCGTGAATTGCAACAGGC 60.734 57.895 0.00 8.96 45.13 4.85
2412 2460 1.959085 CCGTGAATTGCAACAGGCT 59.041 52.632 0.00 0.00 45.15 4.58
2413 2461 0.387622 CCGTGAATTGCAACAGGCTG 60.388 55.000 14.16 14.16 45.15 4.85
2414 2462 0.387622 CGTGAATTGCAACAGGCTGG 60.388 55.000 20.34 2.59 45.15 4.85
2415 2463 0.675633 GTGAATTGCAACAGGCTGGT 59.324 50.000 20.34 10.09 45.15 4.00
2416 2464 1.069049 GTGAATTGCAACAGGCTGGTT 59.931 47.619 20.34 7.93 45.15 3.67
2418 2466 0.393820 AATTGCAACAGGCTGGTTGG 59.606 50.000 20.34 1.96 46.36 3.77
2419 2467 0.760189 ATTGCAACAGGCTGGTTGGT 60.760 50.000 20.34 0.00 46.36 3.67
2420 2468 0.106469 TTGCAACAGGCTGGTTGGTA 60.106 50.000 20.34 0.00 46.36 3.25
2421 2469 0.821711 TGCAACAGGCTGGTTGGTAC 60.822 55.000 20.34 8.66 46.36 3.34
2422 2470 1.852067 GCAACAGGCTGGTTGGTACG 61.852 60.000 20.34 0.00 46.36 3.67
2423 2471 0.250124 CAACAGGCTGGTTGGTACGA 60.250 55.000 20.34 0.00 43.39 3.43
2424 2472 0.690762 AACAGGCTGGTTGGTACGAT 59.309 50.000 20.34 0.00 0.00 3.73
2425 2473 1.563924 ACAGGCTGGTTGGTACGATA 58.436 50.000 20.34 0.00 0.00 2.92
2426 2474 2.116238 ACAGGCTGGTTGGTACGATAT 58.884 47.619 20.34 0.00 0.00 1.63
2427 2475 2.504175 ACAGGCTGGTTGGTACGATATT 59.496 45.455 20.34 0.00 0.00 1.28
2428 2476 3.131396 CAGGCTGGTTGGTACGATATTC 58.869 50.000 6.61 0.00 0.00 1.75
2429 2477 2.769663 AGGCTGGTTGGTACGATATTCA 59.230 45.455 0.00 0.00 0.00 2.57
2430 2478 2.870411 GGCTGGTTGGTACGATATTCAC 59.130 50.000 0.00 0.00 0.00 3.18
2431 2479 3.431766 GGCTGGTTGGTACGATATTCACT 60.432 47.826 0.00 0.00 0.00 3.41
2432 2480 3.802685 GCTGGTTGGTACGATATTCACTC 59.197 47.826 0.00 0.00 0.00 3.51
2433 2481 4.441634 GCTGGTTGGTACGATATTCACTCT 60.442 45.833 0.00 0.00 0.00 3.24
2434 2482 5.006153 TGGTTGGTACGATATTCACTCTG 57.994 43.478 0.00 0.00 0.00 3.35
2435 2483 3.802685 GGTTGGTACGATATTCACTCTGC 59.197 47.826 0.00 0.00 0.00 4.26
2436 2484 4.430007 GTTGGTACGATATTCACTCTGCA 58.570 43.478 0.00 0.00 0.00 4.41
2437 2485 4.729227 TGGTACGATATTCACTCTGCAA 57.271 40.909 0.00 0.00 0.00 4.08
2438 2486 4.430007 TGGTACGATATTCACTCTGCAAC 58.570 43.478 0.00 0.00 0.00 4.17
2439 2487 4.081917 TGGTACGATATTCACTCTGCAACA 60.082 41.667 0.00 0.00 0.00 3.33
2440 2488 4.868171 GGTACGATATTCACTCTGCAACAA 59.132 41.667 0.00 0.00 0.00 2.83
2441 2489 5.350365 GGTACGATATTCACTCTGCAACAAA 59.650 40.000 0.00 0.00 0.00 2.83
2442 2490 5.536554 ACGATATTCACTCTGCAACAAAG 57.463 39.130 0.00 0.00 0.00 2.77
2443 2491 4.393062 ACGATATTCACTCTGCAACAAAGG 59.607 41.667 0.00 0.00 0.00 3.11
2444 2492 4.666237 GATATTCACTCTGCAACAAAGGC 58.334 43.478 0.00 0.00 0.00 4.35
2445 2493 2.057137 TTCACTCTGCAACAAAGGCT 57.943 45.000 0.00 0.00 0.00 4.58
2446 2494 2.057137 TCACTCTGCAACAAAGGCTT 57.943 45.000 0.00 0.00 0.00 4.35
2447 2495 1.949525 TCACTCTGCAACAAAGGCTTC 59.050 47.619 0.00 0.00 0.00 3.86
2448 2496 1.677576 CACTCTGCAACAAAGGCTTCA 59.322 47.619 0.00 0.00 0.00 3.02
2449 2497 2.295349 CACTCTGCAACAAAGGCTTCAT 59.705 45.455 0.00 0.00 0.00 2.57
2450 2498 2.961062 ACTCTGCAACAAAGGCTTCATT 59.039 40.909 0.00 0.00 0.00 2.57
2451 2499 3.243636 ACTCTGCAACAAAGGCTTCATTG 60.244 43.478 15.52 15.52 0.00 2.82
2452 2500 1.796459 CTGCAACAAAGGCTTCATTGC 59.204 47.619 28.29 28.29 44.66 3.56
2453 2501 1.868469 GCAACAAAGGCTTCATTGCA 58.132 45.000 29.25 0.00 44.01 4.08
2454 2502 2.211806 GCAACAAAGGCTTCATTGCAA 58.788 42.857 29.25 0.00 44.01 4.08
2455 2503 2.613133 GCAACAAAGGCTTCATTGCAAA 59.387 40.909 29.25 0.00 44.01 3.68
2456 2504 3.065095 GCAACAAAGGCTTCATTGCAAAA 59.935 39.130 29.25 0.00 44.01 2.44
2457 2505 4.590226 CAACAAAGGCTTCATTGCAAAAC 58.410 39.130 1.71 0.00 34.04 2.43
2458 2506 3.205338 ACAAAGGCTTCATTGCAAAACC 58.795 40.909 1.71 0.56 34.04 3.27
2459 2507 3.204526 CAAAGGCTTCATTGCAAAACCA 58.795 40.909 1.71 0.00 34.04 3.67
2460 2508 3.775261 AAGGCTTCATTGCAAAACCAT 57.225 38.095 1.71 0.00 34.04 3.55
2461 2509 3.323751 AGGCTTCATTGCAAAACCATC 57.676 42.857 1.71 0.00 34.04 3.51
2462 2510 2.027837 AGGCTTCATTGCAAAACCATCC 60.028 45.455 1.71 0.94 34.04 3.51
2463 2511 2.289569 GGCTTCATTGCAAAACCATCCA 60.290 45.455 1.71 0.00 34.04 3.41
2464 2512 3.401182 GCTTCATTGCAAAACCATCCAA 58.599 40.909 1.71 0.00 0.00 3.53
2465 2513 3.814283 GCTTCATTGCAAAACCATCCAAA 59.186 39.130 1.71 0.00 0.00 3.28
2466 2514 4.275443 GCTTCATTGCAAAACCATCCAAAA 59.725 37.500 1.71 0.00 0.00 2.44
2467 2515 5.561339 GCTTCATTGCAAAACCATCCAAAAG 60.561 40.000 1.71 0.00 0.00 2.27
2468 2516 3.814283 TCATTGCAAAACCATCCAAAAGC 59.186 39.130 1.71 0.00 0.00 3.51
2469 2517 1.863267 TGCAAAACCATCCAAAAGCG 58.137 45.000 0.00 0.00 0.00 4.68
2470 2518 1.137872 TGCAAAACCATCCAAAAGCGT 59.862 42.857 0.00 0.00 0.00 5.07
2471 2519 2.209273 GCAAAACCATCCAAAAGCGTT 58.791 42.857 0.00 0.00 0.00 4.84
2472 2520 2.611751 GCAAAACCATCCAAAAGCGTTT 59.388 40.909 0.00 0.00 0.00 3.60
2473 2521 3.064682 GCAAAACCATCCAAAAGCGTTTT 59.935 39.130 0.00 0.00 37.17 2.43
2474 2522 4.438065 GCAAAACCATCCAAAAGCGTTTTT 60.438 37.500 3.95 3.95 35.14 1.94
2482 2530 2.942621 CAAAAGCGTTTTTGCGTGAAG 58.057 42.857 21.83 0.10 44.59 3.02
2483 2531 2.271821 AAAGCGTTTTTGCGTGAAGT 57.728 40.000 0.00 0.00 40.67 3.01
2484 2532 1.544686 AAGCGTTTTTGCGTGAAGTG 58.455 45.000 0.00 0.00 40.67 3.16
2485 2533 0.450184 AGCGTTTTTGCGTGAAGTGT 59.550 45.000 0.00 0.00 40.67 3.55
2486 2534 1.135517 AGCGTTTTTGCGTGAAGTGTT 60.136 42.857 0.00 0.00 40.67 3.32
2487 2535 2.096174 AGCGTTTTTGCGTGAAGTGTTA 59.904 40.909 0.00 0.00 40.67 2.41
2488 2536 3.040099 GCGTTTTTGCGTGAAGTGTTAT 58.960 40.909 0.00 0.00 0.00 1.89
2489 2537 3.484285 GCGTTTTTGCGTGAAGTGTTATT 59.516 39.130 0.00 0.00 0.00 1.40
2490 2538 4.027214 GCGTTTTTGCGTGAAGTGTTATTT 60.027 37.500 0.00 0.00 0.00 1.40
2491 2539 5.499493 GCGTTTTTGCGTGAAGTGTTATTTT 60.499 36.000 0.00 0.00 0.00 1.82
2492 2540 6.462647 CGTTTTTGCGTGAAGTGTTATTTTT 58.537 32.000 0.00 0.00 0.00 1.94
2493 2541 6.403777 CGTTTTTGCGTGAAGTGTTATTTTTG 59.596 34.615 0.00 0.00 0.00 2.44
2494 2542 5.382573 TTTGCGTGAAGTGTTATTTTTGC 57.617 34.783 0.00 0.00 0.00 3.68
2495 2543 4.033990 TGCGTGAAGTGTTATTTTTGCA 57.966 36.364 0.00 0.00 0.00 4.08
2496 2544 4.424626 TGCGTGAAGTGTTATTTTTGCAA 58.575 34.783 0.00 0.00 0.00 4.08
2497 2545 4.864806 TGCGTGAAGTGTTATTTTTGCAAA 59.135 33.333 8.05 8.05 0.00 3.68
2498 2546 5.005203 TGCGTGAAGTGTTATTTTTGCAAAG 59.995 36.000 12.41 0.00 0.00 2.77
2499 2547 5.005299 GCGTGAAGTGTTATTTTTGCAAAGT 59.995 36.000 12.41 8.07 0.00 2.66
2500 2548 6.627274 CGTGAAGTGTTATTTTTGCAAAGTC 58.373 36.000 12.41 3.57 0.00 3.01
2501 2549 6.252441 CGTGAAGTGTTATTTTTGCAAAGTCA 59.748 34.615 12.41 5.97 0.00 3.41
2502 2550 7.043458 CGTGAAGTGTTATTTTTGCAAAGTCAT 60.043 33.333 12.41 8.61 0.00 3.06
2503 2551 8.057742 GTGAAGTGTTATTTTTGCAAAGTCATG 58.942 33.333 12.41 0.00 0.00 3.07
2504 2552 7.763528 TGAAGTGTTATTTTTGCAAAGTCATGT 59.236 29.630 12.41 0.00 0.00 3.21
2505 2553 8.491331 AAGTGTTATTTTTGCAAAGTCATGTT 57.509 26.923 12.41 0.00 0.00 2.71
2506 2554 7.908230 AGTGTTATTTTTGCAAAGTCATGTTG 58.092 30.769 12.41 0.00 0.00 3.33
2507 2555 7.548780 AGTGTTATTTTTGCAAAGTCATGTTGT 59.451 29.630 12.41 0.00 0.00 3.32
2508 2556 8.812329 GTGTTATTTTTGCAAAGTCATGTTGTA 58.188 29.630 12.41 0.00 0.00 2.41
2509 2557 9.029243 TGTTATTTTTGCAAAGTCATGTTGTAG 57.971 29.630 12.41 0.00 0.00 2.74
2510 2558 9.243637 GTTATTTTTGCAAAGTCATGTTGTAGA 57.756 29.630 12.41 0.00 0.00 2.59
2511 2559 9.809096 TTATTTTTGCAAAGTCATGTTGTAGAA 57.191 25.926 12.41 0.00 0.00 2.10
2512 2560 8.891671 ATTTTTGCAAAGTCATGTTGTAGAAT 57.108 26.923 12.41 1.81 0.00 2.40
2513 2561 8.715191 TTTTTGCAAAGTCATGTTGTAGAATT 57.285 26.923 12.41 0.00 0.00 2.17
2514 2562 8.715191 TTTTGCAAAGTCATGTTGTAGAATTT 57.285 26.923 12.41 0.00 32.94 1.82
2515 2563 8.715191 TTTGCAAAGTCATGTTGTAGAATTTT 57.285 26.923 8.05 0.00 30.63 1.82
2516 2564 8.715191 TTGCAAAGTCATGTTGTAGAATTTTT 57.285 26.923 0.00 0.00 30.63 1.94
2536 2584 2.445682 TTTTGCTACAGGGGTTGTGT 57.554 45.000 0.00 0.00 41.10 3.72
2537 2585 2.445682 TTTGCTACAGGGGTTGTGTT 57.554 45.000 0.00 0.00 41.10 3.32
2538 2586 3.579534 TTTGCTACAGGGGTTGTGTTA 57.420 42.857 0.00 0.00 41.10 2.41
2539 2587 2.554370 TGCTACAGGGGTTGTGTTAC 57.446 50.000 0.00 0.00 41.10 2.50
2540 2588 1.769465 TGCTACAGGGGTTGTGTTACA 59.231 47.619 0.00 0.00 41.10 2.41
2541 2589 2.373836 TGCTACAGGGGTTGTGTTACAT 59.626 45.455 0.00 0.00 41.10 2.29
2542 2590 3.583526 TGCTACAGGGGTTGTGTTACATA 59.416 43.478 0.00 0.00 41.10 2.29
2543 2591 4.041815 TGCTACAGGGGTTGTGTTACATAA 59.958 41.667 0.00 0.00 41.10 1.90
2544 2592 5.190677 GCTACAGGGGTTGTGTTACATAAT 58.809 41.667 0.00 0.00 41.10 1.28
2545 2593 5.650703 GCTACAGGGGTTGTGTTACATAATT 59.349 40.000 0.00 0.00 41.10 1.40
2546 2594 6.824704 GCTACAGGGGTTGTGTTACATAATTA 59.175 38.462 0.00 0.00 41.10 1.40
2547 2595 7.501225 GCTACAGGGGTTGTGTTACATAATTAT 59.499 37.037 0.00 0.00 41.10 1.28
2548 2596 9.403583 CTACAGGGGTTGTGTTACATAATTATT 57.596 33.333 0.00 0.00 41.10 1.40
2549 2597 8.658840 ACAGGGGTTGTGTTACATAATTATTT 57.341 30.769 0.00 0.00 38.99 1.40
2550 2598 9.095700 ACAGGGGTTGTGTTACATAATTATTTT 57.904 29.630 0.00 0.00 38.99 1.82
2551 2599 9.936759 CAGGGGTTGTGTTACATAATTATTTTT 57.063 29.630 0.00 0.00 0.00 1.94
2571 2619 5.771602 TTTTTCGTCTTTCACCTTTTTGC 57.228 34.783 0.00 0.00 0.00 3.68
2572 2620 4.442375 TTTCGTCTTTCACCTTTTTGCA 57.558 36.364 0.00 0.00 0.00 4.08
2573 2621 4.442375 TTCGTCTTTCACCTTTTTGCAA 57.558 36.364 0.00 0.00 0.00 4.08
2574 2622 3.765026 TCGTCTTTCACCTTTTTGCAAC 58.235 40.909 0.00 0.00 0.00 4.17
2575 2623 3.191581 TCGTCTTTCACCTTTTTGCAACA 59.808 39.130 0.00 0.00 0.00 3.33
2576 2624 4.111916 CGTCTTTCACCTTTTTGCAACAT 58.888 39.130 0.00 0.00 0.00 2.71
2577 2625 5.066634 TCGTCTTTCACCTTTTTGCAACATA 59.933 36.000 0.00 0.00 0.00 2.29
2578 2626 5.173131 CGTCTTTCACCTTTTTGCAACATAC 59.827 40.000 0.00 0.00 0.00 2.39
2579 2627 6.039616 GTCTTTCACCTTTTTGCAACATACA 58.960 36.000 0.00 0.00 0.00 2.29
2580 2628 6.701400 GTCTTTCACCTTTTTGCAACATACAT 59.299 34.615 0.00 0.00 0.00 2.29
2581 2629 6.700960 TCTTTCACCTTTTTGCAACATACATG 59.299 34.615 0.00 0.00 0.00 3.21
2582 2630 5.781210 TCACCTTTTTGCAACATACATGA 57.219 34.783 0.00 0.00 0.00 3.07
2583 2631 6.343716 TCACCTTTTTGCAACATACATGAT 57.656 33.333 0.00 0.00 0.00 2.45
2584 2632 6.157904 TCACCTTTTTGCAACATACATGATG 58.842 36.000 0.00 1.48 41.79 3.07
2595 2643 4.816786 CATACATGATGTTGCGGAATGA 57.183 40.909 2.29 0.00 0.00 2.57
2596 2644 5.366829 CATACATGATGTTGCGGAATGAT 57.633 39.130 2.29 0.00 0.00 2.45
2597 2645 5.765176 CATACATGATGTTGCGGAATGATT 58.235 37.500 2.29 0.00 0.00 2.57
2598 2646 4.724074 ACATGATGTTGCGGAATGATTT 57.276 36.364 0.00 0.00 0.00 2.17
2599 2647 5.075858 ACATGATGTTGCGGAATGATTTT 57.924 34.783 0.00 0.00 0.00 1.82
2600 2648 5.481105 ACATGATGTTGCGGAATGATTTTT 58.519 33.333 0.00 0.00 0.00 1.94
2601 2649 5.349270 ACATGATGTTGCGGAATGATTTTTG 59.651 36.000 0.00 0.00 0.00 2.44
2602 2650 3.679025 TGATGTTGCGGAATGATTTTTGC 59.321 39.130 0.00 0.00 0.00 3.68
2603 2651 3.103447 TGTTGCGGAATGATTTTTGCA 57.897 38.095 0.00 0.00 0.00 4.08
2604 2652 3.461061 TGTTGCGGAATGATTTTTGCAA 58.539 36.364 0.00 0.00 39.73 4.08
2606 2654 3.103447 TGCGGAATGATTTTTGCAACA 57.897 38.095 0.00 0.00 0.00 3.33
2607 2655 3.461061 TGCGGAATGATTTTTGCAACAA 58.539 36.364 0.00 0.00 0.00 2.83
2608 2656 3.493877 TGCGGAATGATTTTTGCAACAAG 59.506 39.130 0.00 0.00 0.00 3.16
2609 2657 3.120580 GCGGAATGATTTTTGCAACAAGG 60.121 43.478 0.00 0.00 0.00 3.61
2610 2658 4.305769 CGGAATGATTTTTGCAACAAGGA 58.694 39.130 0.00 0.00 0.00 3.36
2611 2659 4.931002 CGGAATGATTTTTGCAACAAGGAT 59.069 37.500 0.00 0.00 0.00 3.24
2612 2660 5.163933 CGGAATGATTTTTGCAACAAGGATG 60.164 40.000 0.00 0.00 0.00 3.51
2613 2661 5.933463 GGAATGATTTTTGCAACAAGGATGA 59.067 36.000 0.00 0.00 0.00 2.92
2614 2662 6.596497 GGAATGATTTTTGCAACAAGGATGAT 59.404 34.615 0.00 0.00 0.00 2.45
2615 2663 6.978343 ATGATTTTTGCAACAAGGATGATG 57.022 33.333 0.00 0.00 32.84 3.07
2616 2664 5.856156 TGATTTTTGCAACAAGGATGATGT 58.144 33.333 0.00 0.00 32.33 3.06
2617 2665 6.289834 TGATTTTTGCAACAAGGATGATGTT 58.710 32.000 0.00 0.00 41.50 2.71
2624 2672 4.686191 AACAAGGATGATGTTGCCAAAA 57.314 36.364 0.00 0.00 39.43 2.44
2625 2673 4.686191 ACAAGGATGATGTTGCCAAAAA 57.314 36.364 0.00 0.00 0.00 1.94
2666 2714 7.658179 ATGATCAAAGTTATATACACGCTGG 57.342 36.000 0.00 0.00 0.00 4.85
2667 2715 5.465390 TGATCAAAGTTATATACACGCTGGC 59.535 40.000 0.00 0.00 0.00 4.85
2668 2716 5.018539 TCAAAGTTATATACACGCTGGCT 57.981 39.130 0.00 0.00 0.00 4.75
2669 2717 6.151663 TCAAAGTTATATACACGCTGGCTA 57.848 37.500 0.00 0.00 0.00 3.93
2670 2718 5.981315 TCAAAGTTATATACACGCTGGCTAC 59.019 40.000 0.00 0.00 0.00 3.58
2671 2719 5.786264 AAGTTATATACACGCTGGCTACT 57.214 39.130 0.00 0.00 0.00 2.57
2672 2720 5.786264 AGTTATATACACGCTGGCTACTT 57.214 39.130 0.00 0.00 0.00 2.24
2673 2721 5.529791 AGTTATATACACGCTGGCTACTTG 58.470 41.667 0.00 0.00 0.00 3.16
2674 2722 5.068723 AGTTATATACACGCTGGCTACTTGT 59.931 40.000 0.00 0.00 0.00 3.16
2790 2840 1.909302 TGGAGGGATCTGAACCACTTC 59.091 52.381 6.29 0.88 0.00 3.01
2863 2914 5.580691 CACATTTGCAGTATAGACCTCGAAA 59.419 40.000 0.00 0.00 0.00 3.46
2897 2949 3.551890 ACGAGCATTTTCAGCTATACACG 59.448 43.478 0.00 0.00 43.58 4.49
2899 2951 2.614057 AGCATTTTCAGCTATACACGGC 59.386 45.455 0.00 0.00 41.32 5.68
2929 2982 5.608437 TGCCCATCTCCTCTTAGTTTGATAT 59.392 40.000 0.00 0.00 0.00 1.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
41 42 1.378514 GACCACATTCCCATGCGGT 60.379 57.895 0.00 0.00 46.75 5.68
49 50 1.398390 GTCTTGCGATGACCACATTCC 59.602 52.381 0.00 0.00 36.82 3.01
177 179 0.324614 TCTGACCATGGTTGTGCGAT 59.675 50.000 20.85 0.00 0.00 4.58
178 180 0.324614 ATCTGACCATGGTTGTGCGA 59.675 50.000 20.85 11.38 0.00 5.10
189 191 2.500229 GTTCGTTCCCAAATCTGACCA 58.500 47.619 0.00 0.00 0.00 4.02
198 200 2.114411 GGGCTGGTTCGTTCCCAA 59.886 61.111 0.00 0.00 38.62 4.12
286 288 4.601794 TGCAGCCACCCCAACCTG 62.602 66.667 0.00 0.00 0.00 4.00
290 292 3.387609 AAGGTTGCAGCCACCCCAA 62.388 57.895 22.64 0.00 0.00 4.12
335 337 2.759114 CTGCTTGAGGCCCTCCAA 59.241 61.111 8.62 0.23 40.92 3.53
357 359 1.139498 TGGTTGGGCTCCAATCTCCA 61.139 55.000 15.52 12.32 45.80 3.86
381 383 0.983467 TCTGGTGGCTGTGCTAATCA 59.017 50.000 0.00 0.00 0.00 2.57
398 400 1.433879 GCAGTCGTGCGTATCCTCT 59.566 57.895 0.00 0.00 40.71 3.69
423 425 0.536460 TGGTTGCGTCCCTTTCTTCC 60.536 55.000 0.00 0.00 0.00 3.46
431 433 2.359975 CTCCCTTGGTTGCGTCCC 60.360 66.667 0.00 0.00 0.00 4.46
503 505 1.227002 CTCTTTCCTCGCCGCTACC 60.227 63.158 0.00 0.00 0.00 3.18
504 506 0.248702 CTCTCTTTCCTCGCCGCTAC 60.249 60.000 0.00 0.00 0.00 3.58
505 507 1.384989 CCTCTCTTTCCTCGCCGCTA 61.385 60.000 0.00 0.00 0.00 4.26
506 508 2.716017 CCTCTCTTTCCTCGCCGCT 61.716 63.158 0.00 0.00 0.00 5.52
507 509 2.202810 CCTCTCTTTCCTCGCCGC 60.203 66.667 0.00 0.00 0.00 6.53
508 510 2.496817 CCCTCTCTTTCCTCGCCG 59.503 66.667 0.00 0.00 0.00 6.46
509 511 2.188207 GCCCTCTCTTTCCTCGCC 59.812 66.667 0.00 0.00 0.00 5.54
510 512 2.202810 CGCCCTCTCTTTCCTCGC 60.203 66.667 0.00 0.00 0.00 5.03
511 513 1.032657 TCTCGCCCTCTCTTTCCTCG 61.033 60.000 0.00 0.00 0.00 4.63
512 514 1.136110 CTTCTCGCCCTCTCTTTCCTC 59.864 57.143 0.00 0.00 0.00 3.71
513 515 1.190643 CTTCTCGCCCTCTCTTTCCT 58.809 55.000 0.00 0.00 0.00 3.36
514 516 0.461163 GCTTCTCGCCCTCTCTTTCC 60.461 60.000 0.00 0.00 0.00 3.13
515 517 0.804156 CGCTTCTCGCCCTCTCTTTC 60.804 60.000 0.00 0.00 34.21 2.62
516 518 1.216710 CGCTTCTCGCCCTCTCTTT 59.783 57.895 0.00 0.00 34.21 2.52
517 519 2.716017 CCGCTTCTCGCCCTCTCTT 61.716 63.158 0.00 0.00 36.73 2.85
538 542 3.854669 CCATCTTCGCCGCCTCCT 61.855 66.667 0.00 0.00 0.00 3.69
616 622 6.939132 ATTTCAGAGCATTTGAGTATCTGG 57.061 37.500 0.00 0.00 38.32 3.86
619 625 6.474751 GCCAAATTTCAGAGCATTTGAGTATC 59.525 38.462 14.69 0.00 41.18 2.24
623 629 4.387862 GTGCCAAATTTCAGAGCATTTGAG 59.612 41.667 14.69 8.68 41.18 3.02
718 726 5.414454 CGGGAGTGAACAAAAAGGATAATCA 59.586 40.000 0.00 0.00 0.00 2.57
723 731 2.514803 CCGGGAGTGAACAAAAAGGAT 58.485 47.619 0.00 0.00 0.00 3.24
726 734 1.687563 ACCCGGGAGTGAACAAAAAG 58.312 50.000 32.02 0.00 0.00 2.27
727 735 2.025898 GAACCCGGGAGTGAACAAAAA 58.974 47.619 32.02 0.00 0.00 1.94
728 736 1.064611 TGAACCCGGGAGTGAACAAAA 60.065 47.619 32.02 0.00 0.00 2.44
732 740 0.613777 AGATGAACCCGGGAGTGAAC 59.386 55.000 32.02 13.57 0.00 3.18
735 743 0.176680 CTCAGATGAACCCGGGAGTG 59.823 60.000 32.02 14.31 0.00 3.51
763 775 2.127869 CGGAGAGGGAATGAGGCGA 61.128 63.158 0.00 0.00 0.00 5.54
772 789 2.245546 TCCAATAGGTTACGGAGAGGGA 59.754 50.000 0.00 0.00 35.89 4.20
785 802 3.290710 CAAGGGGTCAACATCCAATAGG 58.709 50.000 0.00 0.00 0.00 2.57
786 803 3.290710 CCAAGGGGTCAACATCCAATAG 58.709 50.000 0.00 0.00 0.00 1.73
787 804 2.024464 CCCAAGGGGTCAACATCCAATA 60.024 50.000 0.00 0.00 38.25 1.90
788 805 1.273211 CCCAAGGGGTCAACATCCAAT 60.273 52.381 0.00 0.00 38.25 3.16
789 806 0.114168 CCCAAGGGGTCAACATCCAA 59.886 55.000 0.00 0.00 38.25 3.53
790 807 1.773635 CCCAAGGGGTCAACATCCA 59.226 57.895 0.00 0.00 38.25 3.41
791 808 1.682344 GCCCAAGGGGTCAACATCC 60.682 63.158 7.36 0.00 46.51 3.51
792 809 1.076549 TGCCCAAGGGGTCAACATC 59.923 57.895 7.36 0.00 46.51 3.06
793 810 1.228862 GTGCCCAAGGGGTCAACAT 60.229 57.895 7.36 0.00 46.51 2.71
794 811 2.197324 GTGCCCAAGGGGTCAACA 59.803 61.111 7.36 0.00 46.51 3.33
795 812 2.983592 CGTGCCCAAGGGGTCAAC 60.984 66.667 7.36 0.00 46.51 3.18
796 813 4.278513 CCGTGCCCAAGGGGTCAA 62.279 66.667 7.36 0.00 46.51 3.18
802 819 3.222855 TTGTTGCCGTGCCCAAGG 61.223 61.111 0.00 0.00 0.00 3.61
803 820 2.027460 GTTGTTGCCGTGCCCAAG 59.973 61.111 0.00 0.00 0.00 3.61
804 821 2.441164 AGTTGTTGCCGTGCCCAA 60.441 55.556 0.00 0.00 0.00 4.12
805 822 3.215568 CAGTTGTTGCCGTGCCCA 61.216 61.111 0.00 0.00 0.00 5.36
806 823 2.485795 TTCAGTTGTTGCCGTGCCC 61.486 57.895 0.00 0.00 0.00 5.36
807 824 1.299089 GTTCAGTTGTTGCCGTGCC 60.299 57.895 0.00 0.00 0.00 5.01
808 825 1.654137 CGTTCAGTTGTTGCCGTGC 60.654 57.895 0.00 0.00 0.00 5.34
809 826 0.931702 TACGTTCAGTTGTTGCCGTG 59.068 50.000 0.00 0.00 36.18 4.94
810 827 1.873698 ATACGTTCAGTTGTTGCCGT 58.126 45.000 0.00 0.00 37.66 5.68
811 828 2.222420 CGTATACGTTCAGTTGTTGCCG 60.222 50.000 17.16 0.00 34.11 5.69
812 829 2.988493 TCGTATACGTTCAGTTGTTGCC 59.012 45.455 23.67 0.00 40.80 4.52
813 830 3.481467 GCTCGTATACGTTCAGTTGTTGC 60.481 47.826 23.67 10.19 40.80 4.17
814 831 3.060363 GGCTCGTATACGTTCAGTTGTTG 59.940 47.826 23.67 5.15 40.80 3.33
815 832 3.248266 GGCTCGTATACGTTCAGTTGTT 58.752 45.455 23.67 0.00 40.80 2.83
816 833 2.229543 TGGCTCGTATACGTTCAGTTGT 59.770 45.455 23.67 0.00 40.80 3.32
817 834 2.852413 CTGGCTCGTATACGTTCAGTTG 59.148 50.000 23.67 7.02 40.80 3.16
818 835 2.159282 CCTGGCTCGTATACGTTCAGTT 60.159 50.000 23.67 0.00 40.80 3.16
819 836 1.404391 CCTGGCTCGTATACGTTCAGT 59.596 52.381 23.67 0.00 40.80 3.41
820 837 1.864435 GCCTGGCTCGTATACGTTCAG 60.864 57.143 23.67 23.95 40.80 3.02
821 838 0.101759 GCCTGGCTCGTATACGTTCA 59.898 55.000 23.67 17.79 40.80 3.18
822 839 0.384669 AGCCTGGCTCGTATACGTTC 59.615 55.000 23.67 15.92 40.80 3.95
823 840 0.102481 CAGCCTGGCTCGTATACGTT 59.898 55.000 20.49 0.00 36.40 3.99
824 841 1.734137 CAGCCTGGCTCGTATACGT 59.266 57.895 20.49 0.00 36.40 3.57
825 842 1.007271 CCAGCCTGGCTCGTATACG 60.007 63.158 20.49 19.23 36.40 3.06
826 843 1.367840 CCCAGCCTGGCTCGTATAC 59.632 63.158 20.49 0.00 36.40 1.47
827 844 0.689745 AACCCAGCCTGGCTCGTATA 60.690 55.000 20.49 0.00 36.40 1.47
828 845 1.972660 GAACCCAGCCTGGCTCGTAT 61.973 60.000 20.49 5.70 36.40 3.06
829 846 2.606519 AACCCAGCCTGGCTCGTA 60.607 61.111 20.49 0.00 36.40 3.43
830 847 4.021925 GAACCCAGCCTGGCTCGT 62.022 66.667 20.49 15.11 36.40 4.18
831 848 4.785453 GGAACCCAGCCTGGCTCG 62.785 72.222 20.49 13.06 36.40 5.03
843 860 7.979701 AACTGATTGTTTGATGGATGGGAACC 61.980 42.308 0.00 0.00 43.10 3.62
844 861 4.463891 ACTGATTGTTTGATGGATGGGAAC 59.536 41.667 0.00 0.00 0.00 3.62
845 862 4.676109 ACTGATTGTTTGATGGATGGGAA 58.324 39.130 0.00 0.00 0.00 3.97
846 863 4.320546 ACTGATTGTTTGATGGATGGGA 57.679 40.909 0.00 0.00 0.00 4.37
847 864 4.439153 CGAACTGATTGTTTGATGGATGGG 60.439 45.833 0.00 0.00 41.46 4.00
848 865 4.439153 CCGAACTGATTGTTTGATGGATGG 60.439 45.833 0.00 0.00 41.46 3.51
849 866 4.395854 TCCGAACTGATTGTTTGATGGATG 59.604 41.667 0.00 0.00 41.46 3.51
850 867 4.396166 GTCCGAACTGATTGTTTGATGGAT 59.604 41.667 0.00 0.00 41.46 3.41
857 874 1.071071 TCCCGTCCGAACTGATTGTTT 59.929 47.619 0.00 0.00 39.30 2.83
871 888 0.672401 TTCGCATTCCTTGTCCCGTC 60.672 55.000 0.00 0.00 0.00 4.79
888 905 2.030946 CGAATGAAGCCGAACTCCATTC 59.969 50.000 7.13 7.13 39.52 2.67
897 914 1.523711 GGATGCCGAATGAAGCCGA 60.524 57.895 0.00 0.00 0.00 5.54
954 971 6.163476 ACATAATTGAACTCGCAAGTACAGA 58.837 36.000 0.00 0.00 33.48 3.41
955 972 6.408858 ACATAATTGAACTCGCAAGTACAG 57.591 37.500 0.00 0.00 33.48 2.74
957 974 6.741358 GGAAACATAATTGAACTCGCAAGTAC 59.259 38.462 0.00 0.00 33.48 2.73
958 975 6.128117 GGGAAACATAATTGAACTCGCAAGTA 60.128 38.462 0.00 0.00 33.48 2.24
959 976 5.335661 GGGAAACATAATTGAACTCGCAAGT 60.336 40.000 0.00 0.00 37.32 3.16
962 979 3.126171 CGGGAAACATAATTGAACTCGCA 59.874 43.478 0.00 0.00 0.00 5.10
963 980 3.486875 CCGGGAAACATAATTGAACTCGC 60.487 47.826 0.00 0.00 0.00 5.03
964 981 3.936453 TCCGGGAAACATAATTGAACTCG 59.064 43.478 0.00 0.00 0.00 4.18
965 982 4.201920 GCTCCGGGAAACATAATTGAACTC 60.202 45.833 0.00 0.00 0.00 3.01
966 983 3.694566 GCTCCGGGAAACATAATTGAACT 59.305 43.478 0.00 0.00 0.00 3.01
967 984 3.442273 TGCTCCGGGAAACATAATTGAAC 59.558 43.478 0.00 0.00 0.00 3.18
968 985 3.691575 TGCTCCGGGAAACATAATTGAA 58.308 40.909 0.00 0.00 0.00 2.69
969 986 3.358111 TGCTCCGGGAAACATAATTGA 57.642 42.857 0.00 0.00 0.00 2.57
970 987 4.499696 GGAATGCTCCGGGAAACATAATTG 60.500 45.833 11.46 0.00 30.03 2.32
971 988 3.636764 GGAATGCTCCGGGAAACATAATT 59.363 43.478 11.46 0.00 30.03 1.40
972 989 3.222603 GGAATGCTCCGGGAAACATAAT 58.777 45.455 11.46 0.00 30.03 1.28
973 990 2.650322 GGAATGCTCCGGGAAACATAA 58.350 47.619 11.46 0.00 30.03 1.90
974 991 2.341846 GGAATGCTCCGGGAAACATA 57.658 50.000 11.46 0.00 30.03 2.29
975 992 3.191182 GGAATGCTCCGGGAAACAT 57.809 52.632 0.00 2.13 30.03 2.71
976 993 4.734652 GGAATGCTCCGGGAAACA 57.265 55.556 0.00 0.00 30.03 2.83
1003 1020 6.205298 AGGTTGGCTGGCTATCTGATATATA 58.795 40.000 2.00 0.00 0.00 0.86
1031 1048 2.297880 TCGTCGGTGGGGTATGAATATG 59.702 50.000 0.00 0.00 0.00 1.78
1042 1059 2.011741 TTGGATCGATCGTCGGTGGG 62.012 60.000 18.81 0.00 40.88 4.61
1078 1095 2.490217 CCGACGCCGAGAGACAAT 59.510 61.111 0.00 0.00 38.22 2.71
1103 1120 1.004595 GGTGGAATTAAGTCGGCGAC 58.995 55.000 31.33 31.33 0.00 5.19
1104 1121 0.458889 CGGTGGAATTAAGTCGGCGA 60.459 55.000 4.99 4.99 0.00 5.54
1105 1122 0.458889 TCGGTGGAATTAAGTCGGCG 60.459 55.000 0.00 0.00 0.00 6.46
1106 1123 1.134907 TCTCGGTGGAATTAAGTCGGC 60.135 52.381 0.00 0.00 0.00 5.54
1107 1124 2.426024 TCTCTCGGTGGAATTAAGTCGG 59.574 50.000 0.00 0.00 0.00 4.79
1108 1125 3.777465 TCTCTCGGTGGAATTAAGTCG 57.223 47.619 0.00 0.00 0.00 4.18
1109 1126 4.036498 TCGATCTCTCGGTGGAATTAAGTC 59.964 45.833 0.00 0.00 45.10 3.01
1110 1127 3.952323 TCGATCTCTCGGTGGAATTAAGT 59.048 43.478 0.00 0.00 45.10 2.24
1111 1128 4.276183 TCTCGATCTCTCGGTGGAATTAAG 59.724 45.833 0.00 0.00 45.10 1.85
1112 1129 4.036498 GTCTCGATCTCTCGGTGGAATTAA 59.964 45.833 0.00 0.00 45.10 1.40
1113 1130 3.564644 GTCTCGATCTCTCGGTGGAATTA 59.435 47.826 0.00 0.00 45.10 1.40
1124 1141 1.774110 AGCACATGGTCTCGATCTCT 58.226 50.000 0.00 0.00 0.00 3.10
1148 1165 1.841663 CTCTGGTTGTTTGGCCGTCG 61.842 60.000 0.00 0.00 0.00 5.12
1244 1264 1.128692 GCAACCGCTGACATGTTAGTC 59.871 52.381 17.93 9.96 38.99 2.59
1274 1294 2.125673 GGCGCCACGTACATGACT 60.126 61.111 24.80 0.00 0.00 3.41
1313 1333 1.078708 CGGGACAGCATTTACGGGT 60.079 57.895 0.00 0.00 0.00 5.28
1386 1406 0.390472 CTCAGTTGCGGGAGAAGGAC 60.390 60.000 0.00 0.00 32.87 3.85
1388 1408 0.390472 GTCTCAGTTGCGGGAGAAGG 60.390 60.000 0.00 0.00 41.48 3.46
1398 1418 0.598419 TCAGCGCACAGTCTCAGTTG 60.598 55.000 11.47 0.00 0.00 3.16
1425 1445 2.520979 CTTCTCGTCGATGAAGGTCAC 58.479 52.381 18.77 0.00 36.84 3.67
1470 1490 0.736325 CGTAACCGGTTCTGCTGAGG 60.736 60.000 26.16 6.99 0.00 3.86
1509 1529 4.208686 GAGTGGGAGTAGCCGGCG 62.209 72.222 23.20 0.00 37.63 6.46
1550 1570 1.677576 TGGTCGTATAGTAGGTTGGCG 59.322 52.381 0.00 0.00 0.00 5.69
1564 1584 2.963320 GAACGCGTGGTTGGTCGT 60.963 61.111 14.98 0.00 39.50 4.34
1567 1587 2.202905 TTCGAACGCGTGGTTGGT 60.203 55.556 14.98 0.00 39.50 3.67
1578 1598 0.391263 ATCGGACTTGCCCTTCGAAC 60.391 55.000 0.00 0.00 33.53 3.95
1595 1615 1.153549 GTCCTCTGGCGGTGTCATC 60.154 63.158 0.00 0.00 0.00 2.92
1597 1617 3.680786 CGTCCTCTGGCGGTGTCA 61.681 66.667 0.00 0.00 0.00 3.58
1620 1640 4.785453 CTTCCTCCCCTGCACCGC 62.785 72.222 0.00 0.00 0.00 5.68
1621 1641 4.101448 CCTTCCTCCCCTGCACCG 62.101 72.222 0.00 0.00 0.00 4.94
1636 1656 1.284841 CCCCAGCCTCTTCATTCCCT 61.285 60.000 0.00 0.00 0.00 4.20
1642 1662 0.911525 CTTCCTCCCCAGCCTCTTCA 60.912 60.000 0.00 0.00 0.00 3.02
1676 1696 3.740397 CTGGCCACCACGTGCATG 61.740 66.667 10.91 10.52 31.34 4.06
1788 1808 3.127533 GAAGCCGCACTTGCCGAT 61.128 61.111 0.00 0.00 39.29 4.18
1823 1843 2.483106 CTGCTTGAATGCCCATATCTCG 59.517 50.000 0.00 0.00 0.00 4.04
1850 1870 0.179012 TCACCCCAAAGTTCCGGAAC 60.179 55.000 35.28 35.28 41.45 3.62
1907 1927 1.187715 CTCGCCGTGTTTGTTTGTTG 58.812 50.000 0.00 0.00 0.00 3.33
1997 2017 2.758770 TTACTGTGCGGACCAGCGTC 62.759 60.000 4.04 0.00 40.67 5.19
1998 2018 2.863346 TTACTGTGCGGACCAGCGT 61.863 57.895 4.04 0.00 40.67 5.07
2000 2020 1.301401 TGTTACTGTGCGGACCAGC 60.301 57.895 4.04 0.00 33.09 4.85
2006 2026 1.954146 ACAGCGTGTTACTGTGCGG 60.954 57.895 0.00 0.00 46.38 5.69
2014 2034 2.287308 GGTTTTGCATGACAGCGTGTTA 60.287 45.455 0.00 0.00 37.31 2.41
2015 2035 1.535860 GGTTTTGCATGACAGCGTGTT 60.536 47.619 0.00 0.00 37.31 3.32
2016 2036 0.030638 GGTTTTGCATGACAGCGTGT 59.969 50.000 0.00 0.00 37.31 4.49
2017 2037 0.311790 AGGTTTTGCATGACAGCGTG 59.688 50.000 0.00 0.00 37.31 5.34
2018 2038 1.032014 AAGGTTTTGCATGACAGCGT 58.968 45.000 0.00 0.00 37.31 5.07
2019 2039 2.138596 AAAGGTTTTGCATGACAGCG 57.861 45.000 0.00 0.00 37.31 5.18
2094 2142 0.667487 TGACAGCTCTTTTCGGCTCG 60.667 55.000 0.00 0.00 36.59 5.03
2108 2156 7.931578 TTACATTTACCCCAGTTATTGACAG 57.068 36.000 0.00 0.00 0.00 3.51
2115 2163 6.127111 TGAGCGTATTACATTTACCCCAGTTA 60.127 38.462 0.00 0.00 0.00 2.24
2148 2196 4.238514 CTCTCGTCCACAAGGTCTAAAAG 58.761 47.826 0.00 0.00 35.89 2.27
2149 2197 3.640029 ACTCTCGTCCACAAGGTCTAAAA 59.360 43.478 0.00 0.00 35.89 1.52
2150 2198 3.005472 CACTCTCGTCCACAAGGTCTAAA 59.995 47.826 0.00 0.00 35.89 1.85
2176 2224 6.935741 ATAGCGTGCATGGTAATAGAAAAA 57.064 33.333 20.81 0.00 0.00 1.94
2177 2225 8.439993 TTTATAGCGTGCATGGTAATAGAAAA 57.560 30.769 20.81 13.01 0.00 2.29
2178 2226 8.503196 CATTTATAGCGTGCATGGTAATAGAAA 58.497 33.333 20.81 17.06 0.00 2.52
2179 2227 7.659799 ACATTTATAGCGTGCATGGTAATAGAA 59.340 33.333 20.81 13.07 0.00 2.10
2180 2228 7.158697 ACATTTATAGCGTGCATGGTAATAGA 58.841 34.615 20.81 9.98 0.00 1.98
2181 2229 7.364522 ACATTTATAGCGTGCATGGTAATAG 57.635 36.000 20.81 11.84 0.00 1.73
2182 2230 7.332430 GGTACATTTATAGCGTGCATGGTAATA 59.668 37.037 20.81 9.68 0.00 0.98
2183 2231 6.148811 GGTACATTTATAGCGTGCATGGTAAT 59.851 38.462 20.81 9.95 0.00 1.89
2184 2232 5.467399 GGTACATTTATAGCGTGCATGGTAA 59.533 40.000 20.81 8.00 0.00 2.85
2185 2233 4.992319 GGTACATTTATAGCGTGCATGGTA 59.008 41.667 19.41 19.41 0.00 3.25
2186 2234 3.813166 GGTACATTTATAGCGTGCATGGT 59.187 43.478 15.97 15.97 0.00 3.55
2187 2235 3.188460 GGGTACATTTATAGCGTGCATGG 59.812 47.826 8.27 0.00 0.00 3.66
2188 2236 4.065088 AGGGTACATTTATAGCGTGCATG 58.935 43.478 0.09 0.09 0.00 4.06
2189 2237 4.351874 AGGGTACATTTATAGCGTGCAT 57.648 40.909 0.00 0.00 0.00 3.96
2190 2238 3.830744 AGGGTACATTTATAGCGTGCA 57.169 42.857 0.00 0.00 0.00 4.57
2191 2239 6.607735 TTTTAGGGTACATTTATAGCGTGC 57.392 37.500 0.00 0.00 0.00 5.34
2226 2274 9.740239 GACTCGTATGGTGATTTATTACACTTA 57.260 33.333 0.00 0.00 37.22 2.24
2227 2275 8.255206 TGACTCGTATGGTGATTTATTACACTT 58.745 33.333 0.00 0.00 37.22 3.16
2228 2276 7.778083 TGACTCGTATGGTGATTTATTACACT 58.222 34.615 0.00 0.00 37.22 3.55
2229 2277 7.997107 TGACTCGTATGGTGATTTATTACAC 57.003 36.000 0.00 0.00 36.44 2.90
2230 2278 7.593644 CGATGACTCGTATGGTGATTTATTACA 59.406 37.037 0.00 0.00 40.07 2.41
2231 2279 7.410513 GCGATGACTCGTATGGTGATTTATTAC 60.411 40.741 0.00 0.00 46.71 1.89
2232 2280 6.584942 GCGATGACTCGTATGGTGATTTATTA 59.415 38.462 0.00 0.00 46.71 0.98
2233 2281 5.405571 GCGATGACTCGTATGGTGATTTATT 59.594 40.000 0.00 0.00 46.71 1.40
2234 2282 4.923871 GCGATGACTCGTATGGTGATTTAT 59.076 41.667 0.00 0.00 46.71 1.40
2235 2283 4.037565 AGCGATGACTCGTATGGTGATTTA 59.962 41.667 0.00 0.00 46.71 1.40
2236 2284 3.123804 GCGATGACTCGTATGGTGATTT 58.876 45.455 0.00 0.00 46.71 2.17
2237 2285 2.362397 AGCGATGACTCGTATGGTGATT 59.638 45.455 0.00 0.00 46.71 2.57
2238 2286 1.957177 AGCGATGACTCGTATGGTGAT 59.043 47.619 0.00 0.00 46.71 3.06
2239 2287 1.389555 AGCGATGACTCGTATGGTGA 58.610 50.000 0.00 0.00 46.71 4.02
2240 2288 1.854743 CAAGCGATGACTCGTATGGTG 59.145 52.381 0.00 0.00 46.71 4.17
2241 2289 1.202417 CCAAGCGATGACTCGTATGGT 60.202 52.381 10.85 0.00 46.71 3.55
2242 2290 1.067060 TCCAAGCGATGACTCGTATGG 59.933 52.381 12.12 12.12 46.71 2.74
2243 2291 2.033424 TCTCCAAGCGATGACTCGTATG 59.967 50.000 0.00 0.00 46.71 2.39
2244 2292 2.298610 TCTCCAAGCGATGACTCGTAT 58.701 47.619 0.00 0.00 46.71 3.06
2245 2293 1.746470 TCTCCAAGCGATGACTCGTA 58.254 50.000 0.00 0.00 46.71 3.43
2246 2294 1.066303 GATCTCCAAGCGATGACTCGT 59.934 52.381 0.00 0.00 46.71 4.18
2248 2296 2.100584 ACAGATCTCCAAGCGATGACTC 59.899 50.000 0.00 0.00 0.00 3.36
2249 2297 2.106566 ACAGATCTCCAAGCGATGACT 58.893 47.619 0.00 0.00 0.00 3.41
2250 2298 2.200067 CACAGATCTCCAAGCGATGAC 58.800 52.381 0.00 0.00 0.00 3.06
2251 2299 1.827344 ACACAGATCTCCAAGCGATGA 59.173 47.619 0.00 0.00 0.00 2.92
2252 2300 2.200067 GACACAGATCTCCAAGCGATG 58.800 52.381 0.00 0.00 0.00 3.84
2253 2301 1.827344 TGACACAGATCTCCAAGCGAT 59.173 47.619 0.00 0.00 0.00 4.58
2254 2302 1.256812 TGACACAGATCTCCAAGCGA 58.743 50.000 0.00 0.00 0.00 4.93
2255 2303 1.931841 CATGACACAGATCTCCAAGCG 59.068 52.381 0.00 0.00 0.00 4.68
2256 2304 1.669779 GCATGACACAGATCTCCAAGC 59.330 52.381 0.00 0.00 0.00 4.01
2257 2305 3.263489 AGCATGACACAGATCTCCAAG 57.737 47.619 0.00 0.00 0.00 3.61
2258 2306 3.708403 AAGCATGACACAGATCTCCAA 57.292 42.857 0.00 0.00 0.00 3.53
2259 2307 3.708403 AAAGCATGACACAGATCTCCA 57.292 42.857 0.00 0.00 0.00 3.86
2260 2308 6.500684 TTAAAAAGCATGACACAGATCTCC 57.499 37.500 0.00 0.00 0.00 3.71
2261 2309 7.533426 ACATTAAAAAGCATGACACAGATCTC 58.467 34.615 0.00 0.00 0.00 2.75
2262 2310 7.458409 ACATTAAAAAGCATGACACAGATCT 57.542 32.000 0.00 0.00 0.00 2.75
2263 2311 8.430063 CAAACATTAAAAAGCATGACACAGATC 58.570 33.333 0.00 0.00 0.00 2.75
2264 2312 7.385752 CCAAACATTAAAAAGCATGACACAGAT 59.614 33.333 0.00 0.00 0.00 2.90
2265 2313 6.700960 CCAAACATTAAAAAGCATGACACAGA 59.299 34.615 0.00 0.00 0.00 3.41
2266 2314 6.073657 CCCAAACATTAAAAAGCATGACACAG 60.074 38.462 0.00 0.00 0.00 3.66
2267 2315 5.757320 CCCAAACATTAAAAAGCATGACACA 59.243 36.000 0.00 0.00 0.00 3.72
2268 2316 5.757808 ACCCAAACATTAAAAAGCATGACAC 59.242 36.000 0.00 0.00 0.00 3.67
2269 2317 5.757320 CACCCAAACATTAAAAAGCATGACA 59.243 36.000 0.00 0.00 0.00 3.58
2270 2318 5.988561 TCACCCAAACATTAAAAAGCATGAC 59.011 36.000 0.00 0.00 0.00 3.06
2271 2319 5.988561 GTCACCCAAACATTAAAAAGCATGA 59.011 36.000 0.00 0.00 0.00 3.07
2272 2320 5.107530 CGTCACCCAAACATTAAAAAGCATG 60.108 40.000 0.00 0.00 0.00 4.06
2273 2321 4.987912 CGTCACCCAAACATTAAAAAGCAT 59.012 37.500 0.00 0.00 0.00 3.79
2274 2322 4.363999 CGTCACCCAAACATTAAAAAGCA 58.636 39.130 0.00 0.00 0.00 3.91
2275 2323 3.183574 GCGTCACCCAAACATTAAAAAGC 59.816 43.478 0.00 0.00 0.00 3.51
2276 2324 4.616953 AGCGTCACCCAAACATTAAAAAG 58.383 39.130 0.00 0.00 0.00 2.27
2277 2325 4.657436 AGCGTCACCCAAACATTAAAAA 57.343 36.364 0.00 0.00 0.00 1.94
2278 2326 4.319622 CGTAGCGTCACCCAAACATTAAAA 60.320 41.667 0.00 0.00 0.00 1.52
2279 2327 3.186817 CGTAGCGTCACCCAAACATTAAA 59.813 43.478 0.00 0.00 0.00 1.52
2280 2328 2.737783 CGTAGCGTCACCCAAACATTAA 59.262 45.455 0.00 0.00 0.00 1.40
2281 2329 2.029200 TCGTAGCGTCACCCAAACATTA 60.029 45.455 0.00 0.00 0.00 1.90
2282 2330 1.153353 CGTAGCGTCACCCAAACATT 58.847 50.000 0.00 0.00 0.00 2.71
2283 2331 0.319083 TCGTAGCGTCACCCAAACAT 59.681 50.000 0.00 0.00 0.00 2.71
2284 2332 0.598158 GTCGTAGCGTCACCCAAACA 60.598 55.000 0.00 0.00 0.00 2.83
2285 2333 1.611592 CGTCGTAGCGTCACCCAAAC 61.612 60.000 0.00 0.00 0.00 2.93
2286 2334 1.372004 CGTCGTAGCGTCACCCAAA 60.372 57.895 0.00 0.00 0.00 3.28
2287 2335 2.256158 CGTCGTAGCGTCACCCAA 59.744 61.111 0.00 0.00 0.00 4.12
2288 2336 4.409218 GCGTCGTAGCGTCACCCA 62.409 66.667 0.00 0.00 0.00 4.51
2309 2357 1.917782 TTTTCTTTCATCCGCCGGCG 61.918 55.000 41.00 41.00 39.44 6.46
2310 2358 0.456142 GTTTTCTTTCATCCGCCGGC 60.456 55.000 19.07 19.07 0.00 6.13
2311 2359 0.878416 TGTTTTCTTTCATCCGCCGG 59.122 50.000 0.00 0.00 0.00 6.13
2312 2360 2.161410 TGATGTTTTCTTTCATCCGCCG 59.839 45.455 0.00 0.00 39.47 6.46
2313 2361 3.762779 CTGATGTTTTCTTTCATCCGCC 58.237 45.455 0.00 0.00 39.47 6.13
2314 2362 3.174375 GCTGATGTTTTCTTTCATCCGC 58.826 45.455 0.00 0.00 41.29 5.54
2315 2363 3.428045 GGGCTGATGTTTTCTTTCATCCG 60.428 47.826 0.00 0.00 39.47 4.18
2316 2364 3.118992 GGGGCTGATGTTTTCTTTCATCC 60.119 47.826 0.00 0.00 39.47 3.51
2317 2365 3.118992 GGGGGCTGATGTTTTCTTTCATC 60.119 47.826 0.00 0.00 40.29 2.92
2318 2366 2.833943 GGGGGCTGATGTTTTCTTTCAT 59.166 45.455 0.00 0.00 0.00 2.57
2319 2367 2.158325 AGGGGGCTGATGTTTTCTTTCA 60.158 45.455 0.00 0.00 0.00 2.69
2320 2368 2.493675 GAGGGGGCTGATGTTTTCTTTC 59.506 50.000 0.00 0.00 0.00 2.62
2321 2369 2.529632 GAGGGGGCTGATGTTTTCTTT 58.470 47.619 0.00 0.00 0.00 2.52
2322 2370 1.272704 GGAGGGGGCTGATGTTTTCTT 60.273 52.381 0.00 0.00 0.00 2.52
2323 2371 0.332972 GGAGGGGGCTGATGTTTTCT 59.667 55.000 0.00 0.00 0.00 2.52
2324 2372 1.032114 CGGAGGGGGCTGATGTTTTC 61.032 60.000 0.00 0.00 0.00 2.29
2325 2373 1.000896 CGGAGGGGGCTGATGTTTT 60.001 57.895 0.00 0.00 0.00 2.43
2326 2374 1.915078 CTCGGAGGGGGCTGATGTTT 61.915 60.000 0.00 0.00 0.00 2.83
2327 2375 2.285368 TCGGAGGGGGCTGATGTT 60.285 61.111 0.00 0.00 0.00 2.71
2328 2376 2.765807 CTCGGAGGGGGCTGATGT 60.766 66.667 0.00 0.00 0.00 3.06
2329 2377 3.554342 CCTCGGAGGGGGCTGATG 61.554 72.222 16.59 0.00 0.00 3.07
2338 2386 2.511452 AATCGGATGGCCTCGGAGG 61.511 63.158 19.95 19.95 36.74 4.30
2339 2387 1.301244 CAATCGGATGGCCTCGGAG 60.301 63.158 3.32 0.00 36.74 4.63
2340 2388 1.760480 TCAATCGGATGGCCTCGGA 60.760 57.895 3.32 9.45 37.58 4.55
2341 2389 1.595382 GTCAATCGGATGGCCTCGG 60.595 63.158 3.32 3.87 0.00 4.63
2342 2390 1.951130 CGTCAATCGGATGGCCTCG 60.951 63.158 3.32 5.79 35.71 4.63
2343 2391 2.247437 GCGTCAATCGGATGGCCTC 61.247 63.158 3.32 0.00 40.26 4.70
2344 2392 2.203070 GCGTCAATCGGATGGCCT 60.203 61.111 3.32 0.00 40.26 5.19
2345 2393 1.653094 TTTGCGTCAATCGGATGGCC 61.653 55.000 0.00 0.00 39.99 5.36
2346 2394 0.170116 TTTTGCGTCAATCGGATGGC 59.830 50.000 0.00 0.00 39.99 4.40
2347 2395 2.849880 ATTTTGCGTCAATCGGATGG 57.150 45.000 0.00 0.00 39.99 3.51
2348 2396 3.291585 GCTATTTTGCGTCAATCGGATG 58.708 45.455 0.00 0.00 39.99 3.51
2349 2397 2.290641 GGCTATTTTGCGTCAATCGGAT 59.709 45.455 0.00 0.00 39.99 4.18
2350 2398 1.668751 GGCTATTTTGCGTCAATCGGA 59.331 47.619 0.00 0.00 40.26 4.55
2351 2399 1.594518 CGGCTATTTTGCGTCAATCGG 60.595 52.381 0.00 0.00 40.26 4.18
2352 2400 1.062002 ACGGCTATTTTGCGTCAATCG 59.938 47.619 0.00 0.00 43.12 3.34
2353 2401 2.095213 TGACGGCTATTTTGCGTCAATC 59.905 45.455 9.21 0.00 40.47 2.67
2354 2402 2.080693 TGACGGCTATTTTGCGTCAAT 58.919 42.857 9.21 0.00 40.47 2.57
2355 2403 1.463056 CTGACGGCTATTTTGCGTCAA 59.537 47.619 12.07 0.00 41.65 3.18
2356 2404 1.075542 CTGACGGCTATTTTGCGTCA 58.924 50.000 10.82 10.82 40.81 4.35
2357 2405 1.355971 TCTGACGGCTATTTTGCGTC 58.644 50.000 0.00 0.00 37.17 5.19
2358 2406 1.933853 GATCTGACGGCTATTTTGCGT 59.066 47.619 0.00 0.00 0.00 5.24
2359 2407 1.261619 GGATCTGACGGCTATTTTGCG 59.738 52.381 0.00 0.00 0.00 4.85
2360 2408 1.604278 GGGATCTGACGGCTATTTTGC 59.396 52.381 0.00 0.00 0.00 3.68
2361 2409 2.222027 GGGGATCTGACGGCTATTTTG 58.778 52.381 0.00 0.00 0.00 2.44
2362 2410 1.143073 GGGGGATCTGACGGCTATTTT 59.857 52.381 0.00 0.00 0.00 1.82
2363 2411 0.765510 GGGGGATCTGACGGCTATTT 59.234 55.000 0.00 0.00 0.00 1.40
2364 2412 0.399949 TGGGGGATCTGACGGCTATT 60.400 55.000 0.00 0.00 0.00 1.73
2365 2413 0.399949 TTGGGGGATCTGACGGCTAT 60.400 55.000 0.00 0.00 0.00 2.97
2366 2414 0.619255 TTTGGGGGATCTGACGGCTA 60.619 55.000 0.00 0.00 0.00 3.93
2367 2415 1.915078 CTTTGGGGGATCTGACGGCT 61.915 60.000 0.00 0.00 0.00 5.52
2368 2416 1.452108 CTTTGGGGGATCTGACGGC 60.452 63.158 0.00 0.00 0.00 5.68
2369 2417 1.224592 CCTTTGGGGGATCTGACGG 59.775 63.158 0.00 0.00 0.00 4.79
2370 2418 0.392998 CACCTTTGGGGGATCTGACG 60.393 60.000 0.00 0.00 38.59 4.35
2371 2419 0.698818 ACACCTTTGGGGGATCTGAC 59.301 55.000 0.00 0.00 38.59 3.51
2372 2420 0.698238 CACACCTTTGGGGGATCTGA 59.302 55.000 0.00 0.00 38.59 3.27
2373 2421 0.967380 GCACACCTTTGGGGGATCTG 60.967 60.000 0.00 0.00 38.59 2.90
2374 2422 1.384191 GCACACCTTTGGGGGATCT 59.616 57.895 0.00 0.00 38.59 2.75
2375 2423 2.046285 CGCACACCTTTGGGGGATC 61.046 63.158 0.00 0.00 41.71 3.36
2376 2424 2.035626 CGCACACCTTTGGGGGAT 59.964 61.111 0.00 0.00 41.71 3.85
2377 2425 4.966787 GCGCACACCTTTGGGGGA 62.967 66.667 0.30 0.00 41.71 4.81
2381 2429 4.326766 CACGGCGCACACCTTTGG 62.327 66.667 10.83 0.00 0.00 3.28
2382 2430 2.128853 ATTCACGGCGCACACCTTTG 62.129 55.000 10.83 0.00 0.00 2.77
2383 2431 1.452145 AATTCACGGCGCACACCTTT 61.452 50.000 10.83 0.00 0.00 3.11
2384 2432 1.896660 AATTCACGGCGCACACCTT 60.897 52.632 10.83 0.00 0.00 3.50
2385 2433 2.281484 AATTCACGGCGCACACCT 60.281 55.556 10.83 0.00 0.00 4.00
2386 2434 2.126888 CAATTCACGGCGCACACC 60.127 61.111 10.83 0.00 0.00 4.16
2387 2435 2.800746 GCAATTCACGGCGCACAC 60.801 61.111 10.83 0.00 0.00 3.82
2388 2436 2.838974 TTGCAATTCACGGCGCACA 61.839 52.632 10.83 0.00 33.29 4.57
2389 2437 2.050533 TTGCAATTCACGGCGCAC 60.051 55.556 10.83 0.00 33.29 5.34
2390 2438 2.050533 GTTGCAATTCACGGCGCA 60.051 55.556 10.83 0.00 0.00 6.09
2391 2439 2.050533 TGTTGCAATTCACGGCGC 60.051 55.556 6.90 0.00 0.00 6.53
2392 2440 1.442520 CCTGTTGCAATTCACGGCG 60.443 57.895 4.80 4.80 0.00 6.46
2393 2441 1.734117 GCCTGTTGCAATTCACGGC 60.734 57.895 0.59 8.35 40.77 5.68
2394 2442 0.387622 CAGCCTGTTGCAATTCACGG 60.388 55.000 0.59 0.00 44.83 4.94
2395 2443 0.387622 CCAGCCTGTTGCAATTCACG 60.388 55.000 0.59 0.00 44.83 4.35
2396 2444 0.675633 ACCAGCCTGTTGCAATTCAC 59.324 50.000 0.59 0.00 44.83 3.18
2397 2445 1.068895 CAACCAGCCTGTTGCAATTCA 59.931 47.619 0.59 0.00 44.83 2.57
2398 2446 1.606224 CCAACCAGCCTGTTGCAATTC 60.606 52.381 0.59 0.00 43.36 2.17
2399 2447 0.393820 CCAACCAGCCTGTTGCAATT 59.606 50.000 0.59 0.00 43.36 2.32
2400 2448 0.760189 ACCAACCAGCCTGTTGCAAT 60.760 50.000 0.59 0.00 43.36 3.56
2401 2449 0.106469 TACCAACCAGCCTGTTGCAA 60.106 50.000 9.79 0.00 43.36 4.08
2402 2450 0.821711 GTACCAACCAGCCTGTTGCA 60.822 55.000 9.79 0.00 43.36 4.08
2403 2451 1.852067 CGTACCAACCAGCCTGTTGC 61.852 60.000 9.79 0.00 43.36 4.17
2404 2452 0.250124 TCGTACCAACCAGCCTGTTG 60.250 55.000 8.58 8.58 44.12 3.33
2405 2453 0.690762 ATCGTACCAACCAGCCTGTT 59.309 50.000 0.00 0.00 0.00 3.16
2406 2454 1.563924 TATCGTACCAACCAGCCTGT 58.436 50.000 0.00 0.00 0.00 4.00
2407 2455 2.910688 ATATCGTACCAACCAGCCTG 57.089 50.000 0.00 0.00 0.00 4.85
2408 2456 2.769663 TGAATATCGTACCAACCAGCCT 59.230 45.455 0.00 0.00 0.00 4.58
2409 2457 2.870411 GTGAATATCGTACCAACCAGCC 59.130 50.000 0.00 0.00 0.00 4.85
2410 2458 3.793559 AGTGAATATCGTACCAACCAGC 58.206 45.455 0.00 0.00 0.00 4.85
2411 2459 5.043903 CAGAGTGAATATCGTACCAACCAG 58.956 45.833 0.00 0.00 0.00 4.00
2412 2460 4.679639 GCAGAGTGAATATCGTACCAACCA 60.680 45.833 0.00 0.00 0.00 3.67
2413 2461 3.802685 GCAGAGTGAATATCGTACCAACC 59.197 47.826 0.00 0.00 0.00 3.77
2414 2462 4.430007 TGCAGAGTGAATATCGTACCAAC 58.570 43.478 0.00 0.00 0.00 3.77
2415 2463 4.729227 TGCAGAGTGAATATCGTACCAA 57.271 40.909 0.00 0.00 0.00 3.67
2416 2464 4.081917 TGTTGCAGAGTGAATATCGTACCA 60.082 41.667 0.00 0.00 0.00 3.25
2417 2465 4.430007 TGTTGCAGAGTGAATATCGTACC 58.570 43.478 0.00 0.00 0.00 3.34
2418 2466 6.403333 TTTGTTGCAGAGTGAATATCGTAC 57.597 37.500 0.00 0.00 0.00 3.67
2419 2467 5.580691 CCTTTGTTGCAGAGTGAATATCGTA 59.419 40.000 0.00 0.00 0.00 3.43
2420 2468 4.393062 CCTTTGTTGCAGAGTGAATATCGT 59.607 41.667 0.00 0.00 0.00 3.73
2421 2469 4.728882 GCCTTTGTTGCAGAGTGAATATCG 60.729 45.833 0.00 0.00 0.00 2.92
2422 2470 4.397417 AGCCTTTGTTGCAGAGTGAATATC 59.603 41.667 0.00 0.00 0.00 1.63
2423 2471 4.338879 AGCCTTTGTTGCAGAGTGAATAT 58.661 39.130 0.00 0.00 0.00 1.28
2424 2472 3.754965 AGCCTTTGTTGCAGAGTGAATA 58.245 40.909 0.00 0.00 0.00 1.75
2425 2473 2.590821 AGCCTTTGTTGCAGAGTGAAT 58.409 42.857 0.00 0.00 0.00 2.57
2426 2474 2.057137 AGCCTTTGTTGCAGAGTGAA 57.943 45.000 0.00 0.00 0.00 3.18
2427 2475 1.949525 GAAGCCTTTGTTGCAGAGTGA 59.050 47.619 0.00 0.00 0.00 3.41
2428 2476 1.677576 TGAAGCCTTTGTTGCAGAGTG 59.322 47.619 0.00 0.00 0.00 3.51
2429 2477 2.057137 TGAAGCCTTTGTTGCAGAGT 57.943 45.000 0.00 0.00 0.00 3.24
2430 2478 3.314553 CAATGAAGCCTTTGTTGCAGAG 58.685 45.455 0.00 0.00 0.00 3.35
2431 2479 2.546373 GCAATGAAGCCTTTGTTGCAGA 60.546 45.455 17.50 0.00 43.33 4.26
2432 2480 1.796459 GCAATGAAGCCTTTGTTGCAG 59.204 47.619 17.50 0.00 43.33 4.41
2433 2481 1.868469 GCAATGAAGCCTTTGTTGCA 58.132 45.000 17.50 0.00 43.33 4.08
2434 2482 1.868469 TGCAATGAAGCCTTTGTTGC 58.132 45.000 16.26 16.26 43.93 4.17
2435 2483 4.496175 GGTTTTGCAATGAAGCCTTTGTTG 60.496 41.667 0.00 0.08 32.06 3.33
2436 2484 3.627123 GGTTTTGCAATGAAGCCTTTGTT 59.373 39.130 0.00 0.00 32.06 2.83
2437 2485 3.205338 GGTTTTGCAATGAAGCCTTTGT 58.795 40.909 0.00 0.00 32.06 2.83
2438 2486 3.204526 TGGTTTTGCAATGAAGCCTTTG 58.795 40.909 0.00 0.00 0.00 2.77
2439 2487 3.557228 TGGTTTTGCAATGAAGCCTTT 57.443 38.095 0.00 0.00 0.00 3.11
2440 2488 3.557686 GGATGGTTTTGCAATGAAGCCTT 60.558 43.478 0.00 0.00 0.00 4.35
2441 2489 2.027837 GGATGGTTTTGCAATGAAGCCT 60.028 45.455 0.00 0.00 0.00 4.58
2442 2490 2.289569 TGGATGGTTTTGCAATGAAGCC 60.290 45.455 0.00 0.00 0.00 4.35
2443 2491 3.042871 TGGATGGTTTTGCAATGAAGC 57.957 42.857 0.00 2.74 0.00 3.86
2444 2492 5.561339 GCTTTTGGATGGTTTTGCAATGAAG 60.561 40.000 0.00 0.00 0.00 3.02
2445 2493 4.275443 GCTTTTGGATGGTTTTGCAATGAA 59.725 37.500 0.00 0.00 0.00 2.57
2446 2494 3.814283 GCTTTTGGATGGTTTTGCAATGA 59.186 39.130 0.00 0.00 0.00 2.57
2447 2495 3.364167 CGCTTTTGGATGGTTTTGCAATG 60.364 43.478 0.00 0.00 0.00 2.82
2448 2496 2.807392 CGCTTTTGGATGGTTTTGCAAT 59.193 40.909 0.00 0.00 0.00 3.56
2449 2497 2.208431 CGCTTTTGGATGGTTTTGCAA 58.792 42.857 0.00 0.00 0.00 4.08
2450 2498 1.137872 ACGCTTTTGGATGGTTTTGCA 59.862 42.857 0.00 0.00 0.00 4.08
2451 2499 1.864565 ACGCTTTTGGATGGTTTTGC 58.135 45.000 0.00 0.00 0.00 3.68
2452 2500 4.873768 AAAACGCTTTTGGATGGTTTTG 57.126 36.364 0.00 0.00 38.82 2.44
2453 2501 5.228579 CAAAAACGCTTTTGGATGGTTTT 57.771 34.783 14.76 0.00 45.15 2.43
2454 2502 4.873768 CAAAAACGCTTTTGGATGGTTT 57.126 36.364 14.76 0.00 45.15 3.27
2463 2511 2.344142 CACTTCACGCAAAAACGCTTTT 59.656 40.909 0.00 0.00 35.02 2.27
2464 2512 1.917303 CACTTCACGCAAAAACGCTTT 59.083 42.857 0.00 0.00 36.19 3.51
2465 2513 1.135517 ACACTTCACGCAAAAACGCTT 60.136 42.857 0.00 0.00 36.19 4.68
2466 2514 0.450184 ACACTTCACGCAAAAACGCT 59.550 45.000 0.00 0.00 36.19 5.07
2467 2515 1.264672 AACACTTCACGCAAAAACGC 58.735 45.000 0.00 0.00 36.19 4.84
2468 2516 5.613964 AAATAACACTTCACGCAAAAACG 57.386 34.783 0.00 0.00 39.50 3.60
2469 2517 6.191956 GCAAAAATAACACTTCACGCAAAAAC 59.808 34.615 0.00 0.00 0.00 2.43
2470 2518 6.128553 TGCAAAAATAACACTTCACGCAAAAA 60.129 30.769 0.00 0.00 0.00 1.94
2471 2519 5.348724 TGCAAAAATAACACTTCACGCAAAA 59.651 32.000 0.00 0.00 0.00 2.44
2472 2520 4.864806 TGCAAAAATAACACTTCACGCAAA 59.135 33.333 0.00 0.00 0.00 3.68
2473 2521 4.424626 TGCAAAAATAACACTTCACGCAA 58.575 34.783 0.00 0.00 0.00 4.85
2474 2522 4.033990 TGCAAAAATAACACTTCACGCA 57.966 36.364 0.00 0.00 0.00 5.24
2475 2523 5.005299 ACTTTGCAAAAATAACACTTCACGC 59.995 36.000 13.84 0.00 0.00 5.34
2476 2524 6.252441 TGACTTTGCAAAAATAACACTTCACG 59.748 34.615 13.84 0.00 0.00 4.35
2477 2525 7.518731 TGACTTTGCAAAAATAACACTTCAC 57.481 32.000 13.84 0.00 0.00 3.18
2478 2526 7.763528 ACATGACTTTGCAAAAATAACACTTCA 59.236 29.630 13.84 5.26 0.00 3.02
2479 2527 8.130307 ACATGACTTTGCAAAAATAACACTTC 57.870 30.769 13.84 0.08 0.00 3.01
2480 2528 8.389603 CAACATGACTTTGCAAAAATAACACTT 58.610 29.630 13.84 2.75 0.00 3.16
2481 2529 7.548780 ACAACATGACTTTGCAAAAATAACACT 59.451 29.630 13.84 0.00 0.00 3.55
2482 2530 7.683746 ACAACATGACTTTGCAAAAATAACAC 58.316 30.769 13.84 1.02 0.00 3.32
2483 2531 7.840342 ACAACATGACTTTGCAAAAATAACA 57.160 28.000 13.84 9.13 0.00 2.41
2484 2532 9.243637 TCTACAACATGACTTTGCAAAAATAAC 57.756 29.630 13.84 3.95 0.00 1.89
2485 2533 9.809096 TTCTACAACATGACTTTGCAAAAATAA 57.191 25.926 13.84 0.00 0.00 1.40
2486 2534 9.979578 ATTCTACAACATGACTTTGCAAAAATA 57.020 25.926 13.84 2.46 0.00 1.40
2487 2535 8.891671 ATTCTACAACATGACTTTGCAAAAAT 57.108 26.923 13.84 4.23 0.00 1.82
2488 2536 8.715191 AATTCTACAACATGACTTTGCAAAAA 57.285 26.923 13.84 2.35 0.00 1.94
2489 2537 8.715191 AAATTCTACAACATGACTTTGCAAAA 57.285 26.923 13.84 0.00 0.00 2.44
2490 2538 8.715191 AAAATTCTACAACATGACTTTGCAAA 57.285 26.923 12.14 12.14 0.00 3.68
2491 2539 8.715191 AAAAATTCTACAACATGACTTTGCAA 57.285 26.923 0.00 0.00 0.00 4.08
2516 2564 2.741145 ACACAACCCCTGTAGCAAAAA 58.259 42.857 0.00 0.00 36.10 1.94
2517 2565 2.445682 ACACAACCCCTGTAGCAAAA 57.554 45.000 0.00 0.00 36.10 2.44
2518 2566 2.445682 AACACAACCCCTGTAGCAAA 57.554 45.000 0.00 0.00 36.10 3.68
2519 2567 2.172930 TGTAACACAACCCCTGTAGCAA 59.827 45.455 0.00 0.00 36.10 3.91
2520 2568 1.769465 TGTAACACAACCCCTGTAGCA 59.231 47.619 0.00 0.00 36.10 3.49
2521 2569 2.554370 TGTAACACAACCCCTGTAGC 57.446 50.000 0.00 0.00 36.10 3.58
2522 2570 8.974060 ATAATTATGTAACACAACCCCTGTAG 57.026 34.615 0.00 0.00 36.10 2.74
2523 2571 9.756571 AAATAATTATGTAACACAACCCCTGTA 57.243 29.630 0.00 0.00 36.10 2.74
2524 2572 8.658840 AAATAATTATGTAACACAACCCCTGT 57.341 30.769 0.00 0.00 39.56 4.00
2525 2573 9.936759 AAAAATAATTATGTAACACAACCCCTG 57.063 29.630 0.00 0.00 0.00 4.45
2549 2597 5.230942 TGCAAAAAGGTGAAAGACGAAAAA 58.769 33.333 0.00 0.00 0.00 1.94
2550 2598 4.810790 TGCAAAAAGGTGAAAGACGAAAA 58.189 34.783 0.00 0.00 0.00 2.29
2551 2599 4.442375 TGCAAAAAGGTGAAAGACGAAA 57.558 36.364 0.00 0.00 0.00 3.46
2552 2600 4.170256 GTTGCAAAAAGGTGAAAGACGAA 58.830 39.130 0.00 0.00 0.00 3.85
2553 2601 3.191581 TGTTGCAAAAAGGTGAAAGACGA 59.808 39.130 0.00 0.00 0.00 4.20
2554 2602 3.506810 TGTTGCAAAAAGGTGAAAGACG 58.493 40.909 0.00 0.00 0.00 4.18
2555 2603 6.039616 TGTATGTTGCAAAAAGGTGAAAGAC 58.960 36.000 0.00 0.00 0.00 3.01
2556 2604 6.214191 TGTATGTTGCAAAAAGGTGAAAGA 57.786 33.333 0.00 0.00 0.00 2.52
2557 2605 6.700960 TCATGTATGTTGCAAAAAGGTGAAAG 59.299 34.615 0.00 0.00 0.00 2.62
2558 2606 6.577103 TCATGTATGTTGCAAAAAGGTGAAA 58.423 32.000 0.00 0.00 0.00 2.69
2559 2607 6.154203 TCATGTATGTTGCAAAAAGGTGAA 57.846 33.333 0.00 0.00 0.00 3.18
2560 2608 5.781210 TCATGTATGTTGCAAAAAGGTGA 57.219 34.783 0.00 0.00 0.00 4.02
2561 2609 6.397831 CATCATGTATGTTGCAAAAAGGTG 57.602 37.500 0.00 0.00 0.00 4.00
2574 2622 4.816786 TCATTCCGCAACATCATGTATG 57.183 40.909 0.00 0.00 41.74 2.39
2575 2623 6.395426 AAATCATTCCGCAACATCATGTAT 57.605 33.333 0.00 0.00 0.00 2.29
2576 2624 5.833406 AAATCATTCCGCAACATCATGTA 57.167 34.783 0.00 0.00 0.00 2.29
2577 2625 4.724074 AAATCATTCCGCAACATCATGT 57.276 36.364 0.00 0.00 0.00 3.21
2578 2626 5.725590 GCAAAAATCATTCCGCAACATCATG 60.726 40.000 0.00 0.00 0.00 3.07
2579 2627 4.330620 GCAAAAATCATTCCGCAACATCAT 59.669 37.500 0.00 0.00 0.00 2.45
2580 2628 3.679025 GCAAAAATCATTCCGCAACATCA 59.321 39.130 0.00 0.00 0.00 3.07
2581 2629 3.679025 TGCAAAAATCATTCCGCAACATC 59.321 39.130 0.00 0.00 0.00 3.06
2582 2630 3.661944 TGCAAAAATCATTCCGCAACAT 58.338 36.364 0.00 0.00 0.00 2.71
2583 2631 3.103447 TGCAAAAATCATTCCGCAACA 57.897 38.095 0.00 0.00 0.00 3.33
2584 2632 3.247173 TGTTGCAAAAATCATTCCGCAAC 59.753 39.130 18.10 18.10 46.42 4.17
2585 2633 3.461061 TGTTGCAAAAATCATTCCGCAA 58.539 36.364 0.00 0.00 34.85 4.85
2586 2634 3.103447 TGTTGCAAAAATCATTCCGCA 57.897 38.095 0.00 0.00 0.00 5.69
2587 2635 3.120580 CCTTGTTGCAAAAATCATTCCGC 60.121 43.478 1.65 0.00 0.00 5.54
2588 2636 4.305769 TCCTTGTTGCAAAAATCATTCCG 58.694 39.130 1.65 0.00 0.00 4.30
2589 2637 5.933463 TCATCCTTGTTGCAAAAATCATTCC 59.067 36.000 1.65 0.00 0.00 3.01
2590 2638 7.118680 ACATCATCCTTGTTGCAAAAATCATTC 59.881 33.333 1.65 0.00 0.00 2.67
2591 2639 6.938030 ACATCATCCTTGTTGCAAAAATCATT 59.062 30.769 1.65 0.00 0.00 2.57
2592 2640 6.469410 ACATCATCCTTGTTGCAAAAATCAT 58.531 32.000 1.65 0.00 0.00 2.45
2593 2641 5.856156 ACATCATCCTTGTTGCAAAAATCA 58.144 33.333 1.65 0.00 0.00 2.57
2594 2642 6.595794 CAACATCATCCTTGTTGCAAAAATC 58.404 36.000 1.65 0.00 45.10 2.17
2595 2643 6.548441 CAACATCATCCTTGTTGCAAAAAT 57.452 33.333 1.65 0.00 45.10 1.82
2596 2644 5.987777 CAACATCATCCTTGTTGCAAAAA 57.012 34.783 0.00 0.00 45.10 1.94
2640 2688 9.371136 CCAGCGTGTATATAACTTTGATCATAT 57.629 33.333 0.00 0.00 0.00 1.78
2641 2689 7.330946 GCCAGCGTGTATATAACTTTGATCATA 59.669 37.037 0.00 0.00 0.00 2.15
2642 2690 6.147821 GCCAGCGTGTATATAACTTTGATCAT 59.852 38.462 0.00 0.00 0.00 2.45
2643 2691 5.465390 GCCAGCGTGTATATAACTTTGATCA 59.535 40.000 0.00 0.00 0.00 2.92
2644 2692 5.696724 AGCCAGCGTGTATATAACTTTGATC 59.303 40.000 0.00 0.00 0.00 2.92
2645 2693 5.611374 AGCCAGCGTGTATATAACTTTGAT 58.389 37.500 0.00 0.00 0.00 2.57
2646 2694 5.018539 AGCCAGCGTGTATATAACTTTGA 57.981 39.130 0.00 0.00 0.00 2.69
2647 2695 5.983720 AGTAGCCAGCGTGTATATAACTTTG 59.016 40.000 0.00 0.00 0.00 2.77
2648 2696 6.158023 AGTAGCCAGCGTGTATATAACTTT 57.842 37.500 0.00 0.00 0.00 2.66
2649 2697 5.786264 AGTAGCCAGCGTGTATATAACTT 57.214 39.130 0.00 0.00 0.00 2.66
2650 2698 5.068723 ACAAGTAGCCAGCGTGTATATAACT 59.931 40.000 0.00 0.00 0.00 2.24
2651 2699 5.287226 ACAAGTAGCCAGCGTGTATATAAC 58.713 41.667 0.00 0.00 0.00 1.89
2652 2700 5.524971 ACAAGTAGCCAGCGTGTATATAA 57.475 39.130 0.00 0.00 0.00 0.98
2653 2701 5.286438 CAACAAGTAGCCAGCGTGTATATA 58.714 41.667 0.00 0.00 0.00 0.86
2654 2702 4.119862 CAACAAGTAGCCAGCGTGTATAT 58.880 43.478 0.00 0.00 0.00 0.86
2655 2703 3.517602 CAACAAGTAGCCAGCGTGTATA 58.482 45.455 0.00 0.00 0.00 1.47
2656 2704 2.346803 CAACAAGTAGCCAGCGTGTAT 58.653 47.619 0.00 0.00 0.00 2.29
2657 2705 1.606994 CCAACAAGTAGCCAGCGTGTA 60.607 52.381 0.00 0.00 0.00 2.90
2658 2706 0.884704 CCAACAAGTAGCCAGCGTGT 60.885 55.000 0.00 0.00 0.00 4.49
2659 2707 1.577328 CCCAACAAGTAGCCAGCGTG 61.577 60.000 0.00 0.00 0.00 5.34
2660 2708 1.302511 CCCAACAAGTAGCCAGCGT 60.303 57.895 0.00 0.00 0.00 5.07
2661 2709 2.040544 CCCCAACAAGTAGCCAGCG 61.041 63.158 0.00 0.00 0.00 5.18
2662 2710 1.678970 CCCCCAACAAGTAGCCAGC 60.679 63.158 0.00 0.00 0.00 4.85
2663 2711 1.678970 GCCCCCAACAAGTAGCCAG 60.679 63.158 0.00 0.00 0.00 4.85
2664 2712 2.160171 AGCCCCCAACAAGTAGCCA 61.160 57.895 0.00 0.00 0.00 4.75
2665 2713 1.678970 CAGCCCCCAACAAGTAGCC 60.679 63.158 0.00 0.00 0.00 3.93
2666 2714 1.678970 CCAGCCCCCAACAAGTAGC 60.679 63.158 0.00 0.00 0.00 3.58
2667 2715 0.322546 GTCCAGCCCCCAACAAGTAG 60.323 60.000 0.00 0.00 0.00 2.57
2668 2716 0.770557 AGTCCAGCCCCCAACAAGTA 60.771 55.000 0.00 0.00 0.00 2.24
2669 2717 0.770557 TAGTCCAGCCCCCAACAAGT 60.771 55.000 0.00 0.00 0.00 3.16
2670 2718 0.322546 GTAGTCCAGCCCCCAACAAG 60.323 60.000 0.00 0.00 0.00 3.16
2671 2719 1.063070 TGTAGTCCAGCCCCCAACAA 61.063 55.000 0.00 0.00 0.00 2.83
2672 2720 1.063070 TTGTAGTCCAGCCCCCAACA 61.063 55.000 0.00 0.00 0.00 3.33
2673 2721 0.331616 ATTGTAGTCCAGCCCCCAAC 59.668 55.000 0.00 0.00 0.00 3.77
2674 2722 1.843851 CTATTGTAGTCCAGCCCCCAA 59.156 52.381 0.00 0.00 0.00 4.12
2790 2840 4.533222 GGGTTTTCTGTGAAACGTACATG 58.467 43.478 0.00 0.00 42.39 3.21
2863 2914 7.144722 TGAAAATGCTCGTATTTCATGAAGT 57.855 32.000 8.41 8.52 37.95 3.01
2899 2951 0.467384 AGAGGAGATGGGCATCAACG 59.533 55.000 0.00 0.00 40.22 4.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.