Multiple sequence alignment - TraesCS3D01G264600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G264600 chr3D 100.000 1608 0 0 1 1608 366225407 366223800 0.000000e+00 2970.0
1 TraesCS3D01G264600 chr3D 100.000 549 0 0 1781 2329 366223627 366223079 0.000000e+00 1014.0
2 TraesCS3D01G264600 chr3D 91.340 739 34 10 864 1582 366208913 366208185 0.000000e+00 983.0
3 TraesCS3D01G264600 chr3D 100.000 441 0 0 2641 3081 366222767 366222327 0.000000e+00 815.0
4 TraesCS3D01G264600 chr3D 86.237 683 48 14 864 1529 366015328 366014675 0.000000e+00 699.0
5 TraesCS3D01G264600 chr3D 94.033 419 23 2 1 417 402495099 402494681 4.330000e-178 634.0
6 TraesCS3D01G264600 chr3D 100.000 36 0 0 1573 1608 366207719 366207684 1.980000e-07 67.6
7 TraesCS3D01G264600 chr3A 92.403 1211 42 18 437 1608 488304410 488303211 0.000000e+00 1681.0
8 TraesCS3D01G264600 chr3A 85.248 766 63 12 864 1608 488261374 488260638 0.000000e+00 743.0
9 TraesCS3D01G264600 chr3A 88.950 362 22 8 1781 2130 488303169 488302814 6.100000e-117 431.0
10 TraesCS3D01G264600 chr3B 87.967 1205 81 33 440 1607 477626507 477625330 0.000000e+00 1363.0
11 TraesCS3D01G264600 chr3B 85.460 729 59 14 864 1575 477370015 477369317 0.000000e+00 715.0
12 TraesCS3D01G264600 chr3B 89.634 328 25 7 1794 2113 477624920 477624594 2.860000e-110 409.0
13 TraesCS3D01G264600 chr3B 83.333 210 16 11 864 1067 477371188 477370992 3.160000e-40 176.0
14 TraesCS3D01G264600 chr3B 92.000 50 2 2 2843 2891 544812341 544812389 5.510000e-08 69.4
15 TraesCS3D01G264600 chr1D 94.749 419 19 3 1 417 236079929 236080346 0.000000e+00 649.0
16 TraesCS3D01G264600 chr1D 94.286 420 17 5 1 417 433908176 433907761 1.210000e-178 636.0
17 TraesCS3D01G264600 chr7D 94.258 418 23 1 1 417 397377637 397378054 3.350000e-179 638.0
18 TraesCS3D01G264600 chr7D 94.203 414 20 2 1 413 562194253 562194663 2.020000e-176 628.0
19 TraesCS3D01G264600 chr5D 94.258 418 23 1 1 417 525594828 525595245 3.350000e-179 638.0
20 TraesCS3D01G264600 chr5D 94.005 417 21 2 2 417 464611036 464610623 2.020000e-176 628.0
21 TraesCS3D01G264600 chr5A 93.795 419 21 3 1 417 580928261 580927846 2.610000e-175 625.0
22 TraesCS3D01G264600 chr2B 93.541 418 26 1 1 417 159331141 159330724 3.370000e-174 621.0
23 TraesCS3D01G264600 chr6A 92.000 50 2 2 2843 2891 39462967 39463015 5.510000e-08 69.4
24 TraesCS3D01G264600 chr4D 92.857 42 3 0 3040 3081 437815251 437815210 9.220000e-06 62.1
25 TraesCS3D01G264600 chrUn 94.737 38 2 0 2845 2882 82948472 82948509 3.320000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G264600 chr3D 366222327 366225407 3080 True 1599.666667 2970 100.0000 1 3081 3 chr3D.!!$R4 3080
1 TraesCS3D01G264600 chr3D 366014675 366015328 653 True 699.000000 699 86.2370 864 1529 1 chr3D.!!$R1 665
2 TraesCS3D01G264600 chr3D 366207684 366208913 1229 True 525.300000 983 95.6700 864 1608 2 chr3D.!!$R3 744
3 TraesCS3D01G264600 chr3A 488302814 488304410 1596 True 1056.000000 1681 90.6765 437 2130 2 chr3A.!!$R2 1693
4 TraesCS3D01G264600 chr3A 488260638 488261374 736 True 743.000000 743 85.2480 864 1608 1 chr3A.!!$R1 744
5 TraesCS3D01G264600 chr3B 477624594 477626507 1913 True 886.000000 1363 88.8005 440 2113 2 chr3B.!!$R2 1673
6 TraesCS3D01G264600 chr3B 477369317 477371188 1871 True 445.500000 715 84.3965 864 1575 2 chr3B.!!$R1 711

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
175 176 0.031178 CACCTTTTCTGTGTGCTGGC 59.969 55.0 0.0 0.0 0.0 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2131 4092 0.25361 TCCGTTTGGGTCACTGTGTT 59.746 50.0 7.79 0.0 37.0 3.32 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.747855 GCCAAGGAAGAGGCCGTG 60.748 66.667 0.00 0.00 45.18 4.94
22 23 2.750350 CAAGGAAGAGGCCGTGGT 59.250 61.111 0.00 0.00 34.34 4.16
23 24 1.073199 CAAGGAAGAGGCCGTGGTT 59.927 57.895 0.00 0.00 34.34 3.67
24 25 0.955919 CAAGGAAGAGGCCGTGGTTC 60.956 60.000 0.00 0.00 34.34 3.62
25 26 2.434359 GGAAGAGGCCGTGGTTCG 60.434 66.667 0.00 0.00 39.52 3.95
26 27 2.654877 GAAGAGGCCGTGGTTCGA 59.345 61.111 0.00 0.00 42.86 3.71
27 28 1.446272 GAAGAGGCCGTGGTTCGAG 60.446 63.158 0.00 0.00 42.86 4.04
28 29 1.874345 GAAGAGGCCGTGGTTCGAGA 61.874 60.000 0.00 0.00 42.86 4.04
29 30 1.469335 AAGAGGCCGTGGTTCGAGAA 61.469 55.000 0.00 0.00 42.86 2.87
30 31 1.446272 GAGGCCGTGGTTCGAGAAG 60.446 63.158 0.00 0.00 42.86 2.85
31 32 1.874345 GAGGCCGTGGTTCGAGAAGA 61.874 60.000 0.00 0.00 42.86 2.87
32 33 1.218316 GGCCGTGGTTCGAGAAGAT 59.782 57.895 0.00 0.00 42.86 2.40
33 34 1.084370 GGCCGTGGTTCGAGAAGATG 61.084 60.000 0.00 0.00 42.86 2.90
34 35 1.696832 GCCGTGGTTCGAGAAGATGC 61.697 60.000 0.00 0.00 42.86 3.91
35 36 0.389817 CCGTGGTTCGAGAAGATGCA 60.390 55.000 0.00 0.00 42.86 3.96
36 37 0.994995 CGTGGTTCGAGAAGATGCAG 59.005 55.000 0.00 0.00 42.86 4.41
37 38 1.363744 GTGGTTCGAGAAGATGCAGG 58.636 55.000 0.00 0.00 0.00 4.85
38 39 0.391661 TGGTTCGAGAAGATGCAGGC 60.392 55.000 0.00 0.00 0.00 4.85
39 40 1.092345 GGTTCGAGAAGATGCAGGCC 61.092 60.000 0.00 0.00 0.00 5.19
40 41 1.153568 TTCGAGAAGATGCAGGCCG 60.154 57.895 0.00 0.00 0.00 6.13
41 42 1.604147 TTCGAGAAGATGCAGGCCGA 61.604 55.000 0.00 0.00 0.00 5.54
42 43 1.880340 CGAGAAGATGCAGGCCGAC 60.880 63.158 0.00 0.00 0.00 4.79
43 44 1.219124 GAGAAGATGCAGGCCGACA 59.781 57.895 0.00 0.00 0.00 4.35
44 45 0.179062 GAGAAGATGCAGGCCGACAT 60.179 55.000 12.73 12.73 0.00 3.06
45 46 0.463295 AGAAGATGCAGGCCGACATG 60.463 55.000 17.07 1.62 0.00 3.21
46 47 2.056481 GAAGATGCAGGCCGACATGC 62.056 60.000 17.07 12.61 42.86 4.06
47 48 2.515523 GATGCAGGCCGACATGCT 60.516 61.111 17.07 2.82 42.98 3.79
48 49 2.515523 ATGCAGGCCGACATGCTC 60.516 61.111 10.24 0.00 42.98 4.26
49 50 3.333899 ATGCAGGCCGACATGCTCA 62.334 57.895 10.24 0.00 42.98 4.26
50 51 2.747460 GCAGGCCGACATGCTCAA 60.747 61.111 0.00 0.00 39.38 3.02
51 52 2.758089 GCAGGCCGACATGCTCAAG 61.758 63.158 0.00 0.00 39.38 3.02
52 53 1.376424 CAGGCCGACATGCTCAAGT 60.376 57.895 0.00 0.00 0.00 3.16
53 54 0.957395 CAGGCCGACATGCTCAAGTT 60.957 55.000 0.00 0.00 0.00 2.66
54 55 0.674895 AGGCCGACATGCTCAAGTTC 60.675 55.000 0.00 0.00 0.00 3.01
55 56 1.421485 GCCGACATGCTCAAGTTCG 59.579 57.895 0.00 0.00 0.00 3.95
56 57 1.014044 GCCGACATGCTCAAGTTCGA 61.014 55.000 0.00 0.00 0.00 3.71
57 58 0.716108 CCGACATGCTCAAGTTCGAC 59.284 55.000 0.00 0.00 0.00 4.20
58 59 0.363512 CGACATGCTCAAGTTCGACG 59.636 55.000 0.00 0.00 0.00 5.12
59 60 1.698165 GACATGCTCAAGTTCGACGA 58.302 50.000 0.00 0.00 0.00 4.20
60 61 1.387084 GACATGCTCAAGTTCGACGAC 59.613 52.381 0.00 0.00 0.00 4.34
61 62 0.363512 CATGCTCAAGTTCGACGACG 59.636 55.000 0.00 0.00 41.26 5.12
73 74 1.865340 TCGACGACGAGTGATCTATGG 59.135 52.381 5.75 0.00 43.81 2.74
74 75 1.660614 CGACGACGAGTGATCTATGGC 60.661 57.143 0.00 0.00 42.66 4.40
75 76 0.308068 ACGACGAGTGATCTATGGCG 59.692 55.000 0.00 0.00 36.92 5.69
76 77 0.386100 CGACGAGTGATCTATGGCGG 60.386 60.000 0.00 0.00 30.29 6.13
77 78 0.664767 GACGAGTGATCTATGGCGGC 60.665 60.000 0.00 0.00 0.00 6.53
78 79 1.730902 CGAGTGATCTATGGCGGCG 60.731 63.158 0.51 0.51 0.00 6.46
79 80 1.660355 GAGTGATCTATGGCGGCGA 59.340 57.895 12.98 0.00 0.00 5.54
80 81 0.387878 GAGTGATCTATGGCGGCGAG 60.388 60.000 12.98 4.23 0.00 5.03
81 82 1.373497 GTGATCTATGGCGGCGAGG 60.373 63.158 12.98 0.00 0.00 4.63
82 83 1.530655 TGATCTATGGCGGCGAGGA 60.531 57.895 12.98 2.04 0.00 3.71
83 84 1.080434 GATCTATGGCGGCGAGGAC 60.080 63.158 12.98 0.00 0.00 3.85
84 85 2.493907 GATCTATGGCGGCGAGGACC 62.494 65.000 12.98 1.84 0.00 4.46
85 86 3.536917 CTATGGCGGCGAGGACCA 61.537 66.667 12.98 9.10 37.99 4.02
86 87 2.842462 TATGGCGGCGAGGACCAT 60.842 61.111 12.98 16.51 45.94 3.55
87 88 2.771763 CTATGGCGGCGAGGACCATC 62.772 65.000 18.00 0.00 43.14 3.51
89 90 4.162690 GGCGGCGAGGACCATCTT 62.163 66.667 12.98 0.00 0.00 2.40
90 91 2.125106 GCGGCGAGGACCATCTTT 60.125 61.111 12.98 0.00 0.00 2.52
91 92 1.745489 GCGGCGAGGACCATCTTTT 60.745 57.895 12.98 0.00 0.00 2.27
92 93 1.706287 GCGGCGAGGACCATCTTTTC 61.706 60.000 12.98 0.00 0.00 2.29
93 94 1.421410 CGGCGAGGACCATCTTTTCG 61.421 60.000 0.00 0.00 0.00 3.46
94 95 0.391263 GGCGAGGACCATCTTTTCGT 60.391 55.000 0.00 0.00 34.05 3.85
95 96 1.134907 GGCGAGGACCATCTTTTCGTA 60.135 52.381 0.00 0.00 34.05 3.43
96 97 2.483188 GGCGAGGACCATCTTTTCGTAT 60.483 50.000 0.00 0.00 34.05 3.06
97 98 2.540101 GCGAGGACCATCTTTTCGTATG 59.460 50.000 0.00 0.00 34.05 2.39
98 99 2.540101 CGAGGACCATCTTTTCGTATGC 59.460 50.000 0.00 0.00 0.00 3.14
99 100 2.872858 GAGGACCATCTTTTCGTATGCC 59.127 50.000 0.00 0.00 0.00 4.40
100 101 1.597663 GGACCATCTTTTCGTATGCCG 59.402 52.381 0.00 0.00 38.13 5.69
101 102 1.597663 GACCATCTTTTCGTATGCCGG 59.402 52.381 0.00 0.00 37.11 6.13
102 103 0.307760 CCATCTTTTCGTATGCCGGC 59.692 55.000 22.73 22.73 37.11 6.13
103 104 1.013596 CATCTTTTCGTATGCCGGCA 58.986 50.000 34.80 34.80 37.11 5.69
104 105 1.003545 CATCTTTTCGTATGCCGGCAG 60.004 52.381 35.36 21.54 37.11 4.85
105 106 0.742990 TCTTTTCGTATGCCGGCAGG 60.743 55.000 35.36 24.92 41.62 4.85
106 107 1.003112 TTTTCGTATGCCGGCAGGT 60.003 52.632 35.36 21.86 40.50 4.00
107 108 1.302383 TTTTCGTATGCCGGCAGGTG 61.302 55.000 35.36 24.75 40.50 4.00
108 109 2.457743 TTTCGTATGCCGGCAGGTGT 62.458 55.000 35.36 20.64 40.50 4.16
109 110 3.195002 CGTATGCCGGCAGGTGTG 61.195 66.667 35.36 18.02 40.50 3.82
119 120 3.434319 CAGGTGTGCCGGCATGAC 61.434 66.667 35.23 29.57 40.50 3.06
120 121 4.722700 AGGTGTGCCGGCATGACC 62.723 66.667 36.43 36.43 40.50 4.02
122 123 3.737172 GTGTGCCGGCATGACCAC 61.737 66.667 35.23 29.85 39.03 4.16
127 128 4.838152 CCGGCATGACCACGGGAG 62.838 72.222 0.00 0.00 43.69 4.30
142 143 4.760047 GAGCCGCGATGGTGTGGT 62.760 66.667 8.23 0.00 41.67 4.16
143 144 4.760047 AGCCGCGATGGTGTGGTC 62.760 66.667 8.23 0.00 41.67 4.02
145 146 4.429212 CCGCGATGGTGTGGTCGA 62.429 66.667 8.23 0.00 40.11 4.20
146 147 2.431771 CGCGATGGTGTGGTCGAA 60.432 61.111 0.00 0.00 40.11 3.71
147 148 2.726691 CGCGATGGTGTGGTCGAAC 61.727 63.158 0.00 0.00 40.11 3.95
148 149 1.374252 GCGATGGTGTGGTCGAACT 60.374 57.895 0.33 0.00 40.11 3.01
149 150 1.352156 GCGATGGTGTGGTCGAACTC 61.352 60.000 0.33 0.00 40.11 3.01
150 151 0.038618 CGATGGTGTGGTCGAACTCA 60.039 55.000 0.33 0.18 40.11 3.41
151 152 1.604438 CGATGGTGTGGTCGAACTCAA 60.604 52.381 6.82 0.00 40.11 3.02
152 153 2.069273 GATGGTGTGGTCGAACTCAAG 58.931 52.381 6.82 0.00 0.00 3.02
153 154 0.828022 TGGTGTGGTCGAACTCAAGT 59.172 50.000 6.82 0.00 0.00 3.16
154 155 1.202486 TGGTGTGGTCGAACTCAAGTC 60.202 52.381 6.82 1.29 0.00 3.01
155 156 1.499049 GTGTGGTCGAACTCAAGTCC 58.501 55.000 6.82 0.00 0.00 3.85
156 157 0.391597 TGTGGTCGAACTCAAGTCCC 59.608 55.000 2.05 0.00 0.00 4.46
157 158 0.391597 GTGGTCGAACTCAAGTCCCA 59.608 55.000 0.33 0.00 0.00 4.37
158 159 0.391597 TGGTCGAACTCAAGTCCCAC 59.608 55.000 0.33 0.00 0.00 4.61
159 160 0.320508 GGTCGAACTCAAGTCCCACC 60.321 60.000 0.00 0.00 0.00 4.61
160 161 0.680061 GTCGAACTCAAGTCCCACCT 59.320 55.000 0.00 0.00 0.00 4.00
161 162 1.070289 GTCGAACTCAAGTCCCACCTT 59.930 52.381 0.00 0.00 0.00 3.50
162 163 1.766496 TCGAACTCAAGTCCCACCTTT 59.234 47.619 0.00 0.00 0.00 3.11
163 164 2.171870 TCGAACTCAAGTCCCACCTTTT 59.828 45.455 0.00 0.00 0.00 2.27
164 165 2.548480 CGAACTCAAGTCCCACCTTTTC 59.452 50.000 0.00 0.00 0.00 2.29
165 166 3.744530 CGAACTCAAGTCCCACCTTTTCT 60.745 47.826 0.00 0.00 0.00 2.52
166 167 3.214696 ACTCAAGTCCCACCTTTTCTG 57.785 47.619 0.00 0.00 0.00 3.02
167 168 2.509964 ACTCAAGTCCCACCTTTTCTGT 59.490 45.455 0.00 0.00 0.00 3.41
168 169 2.880890 CTCAAGTCCCACCTTTTCTGTG 59.119 50.000 0.00 0.00 0.00 3.66
169 170 2.241176 TCAAGTCCCACCTTTTCTGTGT 59.759 45.455 0.00 0.00 31.71 3.72
170 171 2.348411 AGTCCCACCTTTTCTGTGTG 57.652 50.000 0.00 0.00 31.71 3.82
171 172 0.668535 GTCCCACCTTTTCTGTGTGC 59.331 55.000 0.00 0.00 31.71 4.57
172 173 0.550914 TCCCACCTTTTCTGTGTGCT 59.449 50.000 0.00 0.00 31.71 4.40
173 174 0.670162 CCCACCTTTTCTGTGTGCTG 59.330 55.000 0.00 0.00 31.71 4.41
174 175 0.670162 CCACCTTTTCTGTGTGCTGG 59.330 55.000 0.00 0.00 31.71 4.85
175 176 0.031178 CACCTTTTCTGTGTGCTGGC 59.969 55.000 0.00 0.00 0.00 4.85
176 177 0.395586 ACCTTTTCTGTGTGCTGGCA 60.396 50.000 0.00 0.00 0.00 4.92
177 178 0.963962 CCTTTTCTGTGTGCTGGCAT 59.036 50.000 0.00 0.00 0.00 4.40
178 179 1.336517 CCTTTTCTGTGTGCTGGCATG 60.337 52.381 0.00 0.00 0.00 4.06
179 180 1.338973 CTTTTCTGTGTGCTGGCATGT 59.661 47.619 0.00 0.00 0.00 3.21
180 181 0.669619 TTTCTGTGTGCTGGCATGTG 59.330 50.000 0.00 0.00 0.00 3.21
181 182 0.466007 TTCTGTGTGCTGGCATGTGT 60.466 50.000 0.00 0.00 0.00 3.72
182 183 1.167781 TCTGTGTGCTGGCATGTGTG 61.168 55.000 0.00 0.00 0.00 3.82
222 223 2.865119 TCAGCATGAACTGTGGTGAT 57.135 45.000 0.00 0.00 45.97 3.06
223 224 3.979101 TCAGCATGAACTGTGGTGATA 57.021 42.857 0.00 0.00 45.97 2.15
224 225 4.492494 TCAGCATGAACTGTGGTGATAT 57.508 40.909 0.00 0.00 45.97 1.63
225 226 4.847198 TCAGCATGAACTGTGGTGATATT 58.153 39.130 0.00 0.00 45.97 1.28
226 227 5.255687 TCAGCATGAACTGTGGTGATATTT 58.744 37.500 0.00 0.00 45.97 1.40
227 228 5.711506 TCAGCATGAACTGTGGTGATATTTT 59.288 36.000 0.00 0.00 45.97 1.82
228 229 6.032094 CAGCATGAACTGTGGTGATATTTTC 58.968 40.000 0.00 0.00 45.32 2.29
229 230 5.948162 AGCATGAACTGTGGTGATATTTTCT 59.052 36.000 0.00 0.00 0.00 2.52
230 231 6.032094 GCATGAACTGTGGTGATATTTTCTG 58.968 40.000 0.00 0.00 0.00 3.02
231 232 6.127925 GCATGAACTGTGGTGATATTTTCTGA 60.128 38.462 0.00 0.00 0.00 3.27
232 233 7.575532 GCATGAACTGTGGTGATATTTTCTGAA 60.576 37.037 0.00 0.00 0.00 3.02
233 234 7.439157 TGAACTGTGGTGATATTTTCTGAAG 57.561 36.000 0.00 0.00 0.00 3.02
234 235 5.886960 ACTGTGGTGATATTTTCTGAAGC 57.113 39.130 0.00 0.00 0.00 3.86
235 236 4.702131 ACTGTGGTGATATTTTCTGAAGCC 59.298 41.667 0.00 0.00 0.00 4.35
236 237 3.689161 TGTGGTGATATTTTCTGAAGCCG 59.311 43.478 0.00 0.00 0.00 5.52
237 238 3.065371 GTGGTGATATTTTCTGAAGCCGG 59.935 47.826 0.00 0.00 0.00 6.13
238 239 2.033424 GGTGATATTTTCTGAAGCCGGC 59.967 50.000 21.89 21.89 0.00 6.13
239 240 2.682856 GTGATATTTTCTGAAGCCGGCA 59.317 45.455 31.54 7.07 0.00 5.69
240 241 3.316308 GTGATATTTTCTGAAGCCGGCAT 59.684 43.478 31.54 19.26 0.00 4.40
241 242 3.953612 TGATATTTTCTGAAGCCGGCATT 59.046 39.130 31.54 19.82 0.00 3.56
242 243 2.660189 ATTTTCTGAAGCCGGCATTG 57.340 45.000 31.54 15.57 0.00 2.82
243 244 1.327303 TTTTCTGAAGCCGGCATTGT 58.673 45.000 31.54 10.83 0.00 2.71
244 245 2.192664 TTTCTGAAGCCGGCATTGTA 57.807 45.000 31.54 8.10 0.00 2.41
245 246 2.418368 TTCTGAAGCCGGCATTGTAT 57.582 45.000 31.54 2.66 0.00 2.29
246 247 1.667236 TCTGAAGCCGGCATTGTATG 58.333 50.000 31.54 11.61 0.00 2.39
255 256 2.328989 CATTGTATGCCGGCGCTG 59.671 61.111 23.90 9.96 35.36 5.18
256 257 2.901840 ATTGTATGCCGGCGCTGG 60.902 61.111 31.57 31.57 35.36 4.85
273 274 3.285215 GCATGGAGCCGGCATGAG 61.285 66.667 31.54 15.22 37.23 2.90
274 275 2.507452 CATGGAGCCGGCATGAGA 59.493 61.111 31.54 7.74 0.00 3.27
275 276 1.890979 CATGGAGCCGGCATGAGAC 60.891 63.158 31.54 11.98 0.00 3.36
276 277 2.369633 ATGGAGCCGGCATGAGACA 61.370 57.895 31.54 17.40 0.00 3.41
277 278 1.913951 ATGGAGCCGGCATGAGACAA 61.914 55.000 31.54 6.26 0.00 3.18
278 279 1.817099 GGAGCCGGCATGAGACAAG 60.817 63.158 31.54 0.00 0.00 3.16
279 280 1.817099 GAGCCGGCATGAGACAAGG 60.817 63.158 31.54 0.00 0.00 3.61
280 281 3.512516 GCCGGCATGAGACAAGGC 61.513 66.667 24.80 0.00 37.61 4.35
281 282 2.825836 CCGGCATGAGACAAGGCC 60.826 66.667 0.00 0.00 42.98 5.19
283 284 3.512516 GGCATGAGACAAGGCCGC 61.513 66.667 0.00 0.00 36.58 6.53
284 285 3.512516 GCATGAGACAAGGCCGCC 61.513 66.667 0.00 0.00 0.00 6.13
285 286 3.197790 CATGAGACAAGGCCGCCG 61.198 66.667 3.05 0.00 0.00 6.46
286 287 4.473520 ATGAGACAAGGCCGCCGG 62.474 66.667 0.00 0.00 0.00 6.13
312 313 3.509659 GCCGCGGGCTCTTTTTAT 58.490 55.556 29.38 0.00 46.69 1.40
313 314 1.807226 GCCGCGGGCTCTTTTTATT 59.193 52.632 29.38 0.00 46.69 1.40
314 315 0.172578 GCCGCGGGCTCTTTTTATTT 59.827 50.000 29.38 0.00 46.69 1.40
315 316 1.402613 GCCGCGGGCTCTTTTTATTTA 59.597 47.619 29.38 0.00 46.69 1.40
316 317 2.159352 GCCGCGGGCTCTTTTTATTTAA 60.159 45.455 29.38 0.00 46.69 1.52
317 318 3.673866 GCCGCGGGCTCTTTTTATTTAAA 60.674 43.478 29.38 0.00 46.69 1.52
318 319 4.487019 CCGCGGGCTCTTTTTATTTAAAA 58.513 39.130 20.10 0.00 34.64 1.52
319 320 6.906509 GCCGCGGGCTCTTTTTATTTAAAAG 61.907 44.000 29.38 2.25 46.69 2.27
341 342 7.553881 AAGTTGAATACGGACATGAAATAGG 57.446 36.000 0.00 0.00 0.00 2.57
342 343 6.650120 AGTTGAATACGGACATGAAATAGGT 58.350 36.000 0.00 0.00 0.00 3.08
343 344 6.761714 AGTTGAATACGGACATGAAATAGGTC 59.238 38.462 0.00 0.00 39.31 3.85
344 345 5.286438 TGAATACGGACATGAAATAGGTCG 58.714 41.667 0.00 0.00 40.89 4.79
345 346 2.596904 ACGGACATGAAATAGGTCGG 57.403 50.000 0.00 0.00 43.42 4.79
346 347 1.217882 CGGACATGAAATAGGTCGGC 58.782 55.000 0.00 0.00 40.89 5.54
347 348 1.217882 GGACATGAAATAGGTCGGCG 58.782 55.000 0.00 0.00 40.89 6.46
348 349 0.582005 GACATGAAATAGGTCGGCGC 59.418 55.000 0.00 0.00 29.60 6.53
349 350 1.151777 ACATGAAATAGGTCGGCGCG 61.152 55.000 0.00 0.00 0.00 6.86
350 351 1.143183 ATGAAATAGGTCGGCGCGT 59.857 52.632 8.43 1.54 0.00 6.01
351 352 0.461339 ATGAAATAGGTCGGCGCGTT 60.461 50.000 8.43 0.00 0.00 4.84
352 353 1.347221 GAAATAGGTCGGCGCGTTG 59.653 57.895 8.43 0.00 0.00 4.10
353 354 2.032185 GAAATAGGTCGGCGCGTTGG 62.032 60.000 8.43 0.00 0.00 3.77
354 355 4.524318 ATAGGTCGGCGCGTTGGG 62.524 66.667 8.43 0.00 0.00 4.12
372 373 3.055719 CGCACTGCCGACCCAAAT 61.056 61.111 0.00 0.00 0.00 2.32
373 374 2.568090 GCACTGCCGACCCAAATG 59.432 61.111 0.00 0.00 0.00 2.32
374 375 2.568090 CACTGCCGACCCAAATGC 59.432 61.111 0.00 0.00 0.00 3.56
375 376 2.115052 ACTGCCGACCCAAATGCA 59.885 55.556 0.00 0.00 0.00 3.96
376 377 1.304381 ACTGCCGACCCAAATGCAT 60.304 52.632 0.00 0.00 32.53 3.96
377 378 0.034574 ACTGCCGACCCAAATGCATA 60.035 50.000 0.00 0.00 32.53 3.14
378 379 1.102154 CTGCCGACCCAAATGCATAA 58.898 50.000 0.00 0.00 32.53 1.90
379 380 0.814457 TGCCGACCCAAATGCATAAC 59.186 50.000 0.00 0.00 0.00 1.89
380 381 1.102978 GCCGACCCAAATGCATAACT 58.897 50.000 0.00 0.00 0.00 2.24
381 382 1.202290 GCCGACCCAAATGCATAACTG 60.202 52.381 0.00 0.00 0.00 3.16
382 383 1.405105 CCGACCCAAATGCATAACTGG 59.595 52.381 13.15 13.15 0.00 4.00
385 386 0.102844 CCCAAATGCATAACTGGGCG 59.897 55.000 22.07 6.44 42.10 6.13
386 387 0.102844 CCAAATGCATAACTGGGCGG 59.897 55.000 0.00 0.00 0.00 6.13
387 388 1.102154 CAAATGCATAACTGGGCGGA 58.898 50.000 0.00 0.00 0.00 5.54
388 389 1.682854 CAAATGCATAACTGGGCGGAT 59.317 47.619 0.00 0.00 0.00 4.18
389 390 1.321474 AATGCATAACTGGGCGGATG 58.679 50.000 0.00 0.00 0.00 3.51
390 391 1.174712 ATGCATAACTGGGCGGATGC 61.175 55.000 0.00 0.00 44.00 3.91
420 421 3.101428 CGACCCAAACGGACGTCG 61.101 66.667 9.92 7.64 43.65 5.12
421 422 2.735857 GACCCAAACGGACGTCGG 60.736 66.667 20.28 20.28 44.45 4.79
422 423 4.974989 ACCCAAACGGACGTCGGC 62.975 66.667 21.60 2.31 44.45 5.54
477 478 4.569564 GGATTTTCGCTAGTTGGTCGTAAT 59.430 41.667 0.00 0.00 0.00 1.89
487 488 5.654603 AGTTGGTCGTAATATGTCACTCA 57.345 39.130 0.00 0.00 0.00 3.41
499 500 1.271001 TGTCACTCATCAGCAAGTGGG 60.271 52.381 2.96 0.00 42.52 4.61
621 630 4.278310 AGTGGATTTTACAGGGTAATGGC 58.722 43.478 0.00 0.00 0.00 4.40
622 631 4.020543 GTGGATTTTACAGGGTAATGGCA 58.979 43.478 0.00 0.00 0.00 4.92
644 653 0.399075 GGTTTCTTTCTCGTCCCCCA 59.601 55.000 0.00 0.00 0.00 4.96
735 763 3.508840 CCCACGCGCAAATCCTCC 61.509 66.667 5.73 0.00 0.00 4.30
800 828 0.318762 ACTCAGCTCACCTTTCGTCC 59.681 55.000 0.00 0.00 0.00 4.79
801 829 0.734253 CTCAGCTCACCTTTCGTCCG 60.734 60.000 0.00 0.00 0.00 4.79
898 940 2.159421 AGTATATATCTCCCGCGCAACG 60.159 50.000 8.75 0.00 43.15 4.10
962 2185 1.270826 TCCTCGCACTCTGTCTTCAAG 59.729 52.381 0.00 0.00 0.00 3.02
983 2215 6.211584 TCAAGCTTATCGCCTTTATCCTATCT 59.788 38.462 0.00 0.00 40.39 1.98
987 2219 2.168496 TCGCCTTTATCCTATCTCCGG 58.832 52.381 0.00 0.00 0.00 5.14
1147 2379 4.794648 CGCCGGGCCATTTCCTGA 62.795 66.667 14.55 0.00 34.34 3.86
1541 2785 4.129737 GGAGAGCTACGCCGCACA 62.130 66.667 0.00 0.00 0.00 4.57
1924 3872 0.251916 TTCTCACTTACCCATGGGCG 59.748 55.000 31.73 20.90 39.32 6.13
1940 3897 4.595762 TGGGCGACACTAGTATAATTCC 57.404 45.455 0.00 0.00 0.00 3.01
2003 3962 6.068931 CCTTTGTTATAACTCAACAACGACG 58.931 40.000 16.33 0.00 43.57 5.12
2005 3964 6.442487 TTGTTATAACTCAACAACGACGAG 57.558 37.500 16.33 0.00 40.12 4.18
2049 4010 7.737972 TTTCTTTGTCGAAAGGATTCATACA 57.262 32.000 0.00 0.00 39.36 2.29
2121 4082 7.307337 GCCAACAACTTTCATTGGAATGTTAAG 60.307 37.037 6.42 11.80 44.73 1.85
2124 4085 7.147976 ACAACTTTCATTGGAATGTTAAGAGC 58.852 34.615 16.63 0.00 44.73 4.09
2126 4087 7.288810 ACTTTCATTGGAATGTTAAGAGCAA 57.711 32.000 16.63 0.00 37.96 3.91
2127 4088 7.147976 ACTTTCATTGGAATGTTAAGAGCAAC 58.852 34.615 16.63 0.00 37.96 4.17
2129 4090 6.899393 TCATTGGAATGTTAAGAGCAACTT 57.101 33.333 0.00 2.10 38.69 2.66
2130 4091 6.913170 TCATTGGAATGTTAAGAGCAACTTC 58.087 36.000 0.00 0.00 37.55 3.01
2131 4092 6.489700 TCATTGGAATGTTAAGAGCAACTTCA 59.510 34.615 0.00 0.00 37.55 3.02
2132 4093 6.707440 TTGGAATGTTAAGAGCAACTTCAA 57.293 33.333 0.00 0.00 39.72 2.69
2133 4094 6.072112 TGGAATGTTAAGAGCAACTTCAAC 57.928 37.500 0.00 4.97 39.72 3.18
2134 4095 5.592282 TGGAATGTTAAGAGCAACTTCAACA 59.408 36.000 14.14 14.14 39.72 3.33
2135 4096 5.915196 GGAATGTTAAGAGCAACTTCAACAC 59.085 40.000 14.11 8.05 39.72 3.32
2136 4097 6.449635 AATGTTAAGAGCAACTTCAACACA 57.550 33.333 14.11 8.86 39.72 3.72
2137 4098 5.484173 TGTTAAGAGCAACTTCAACACAG 57.516 39.130 0.00 0.00 39.72 3.66
2138 4099 4.941263 TGTTAAGAGCAACTTCAACACAGT 59.059 37.500 0.00 0.00 39.72 3.55
2139 4100 5.163764 TGTTAAGAGCAACTTCAACACAGTG 60.164 40.000 0.00 0.00 39.72 3.66
2140 4101 3.266510 AGAGCAACTTCAACACAGTGA 57.733 42.857 7.81 0.00 0.00 3.41
2141 4102 2.939103 AGAGCAACTTCAACACAGTGAC 59.061 45.455 7.81 0.00 0.00 3.67
2142 4103 2.017049 AGCAACTTCAACACAGTGACC 58.983 47.619 7.81 0.00 0.00 4.02
2143 4104 1.065551 GCAACTTCAACACAGTGACCC 59.934 52.381 7.81 0.00 0.00 4.46
2144 4105 2.364632 CAACTTCAACACAGTGACCCA 58.635 47.619 7.81 0.00 0.00 4.51
2145 4106 2.752354 CAACTTCAACACAGTGACCCAA 59.248 45.455 7.81 0.00 0.00 4.12
2146 4107 3.080300 ACTTCAACACAGTGACCCAAA 57.920 42.857 7.81 0.00 0.00 3.28
2147 4108 2.752903 ACTTCAACACAGTGACCCAAAC 59.247 45.455 7.81 0.00 0.00 2.93
2148 4109 1.374560 TCAACACAGTGACCCAAACG 58.625 50.000 7.81 0.00 0.00 3.60
2149 4110 0.380378 CAACACAGTGACCCAAACGG 59.620 55.000 7.81 0.00 37.81 4.44
2150 4111 0.253610 AACACAGTGACCCAAACGGA 59.746 50.000 7.81 0.00 34.64 4.69
2151 4112 0.472471 ACACAGTGACCCAAACGGAT 59.528 50.000 7.81 0.00 34.64 4.18
2152 4113 1.695242 ACACAGTGACCCAAACGGATA 59.305 47.619 7.81 0.00 34.64 2.59
2153 4114 2.304761 ACACAGTGACCCAAACGGATAT 59.695 45.455 7.81 0.00 34.64 1.63
2154 4115 2.677836 CACAGTGACCCAAACGGATATG 59.322 50.000 0.00 0.00 34.64 1.78
2155 4116 2.288666 CAGTGACCCAAACGGATATGG 58.711 52.381 0.00 0.00 36.42 2.74
2156 4117 2.093181 CAGTGACCCAAACGGATATGGA 60.093 50.000 0.00 0.00 39.12 3.41
2157 4118 2.777692 AGTGACCCAAACGGATATGGAT 59.222 45.455 0.00 0.00 39.12 3.41
2158 4119 3.202151 AGTGACCCAAACGGATATGGATT 59.798 43.478 0.00 0.00 39.12 3.01
2159 4120 3.951680 GTGACCCAAACGGATATGGATTT 59.048 43.478 0.00 0.00 39.12 2.17
2160 4121 4.401202 GTGACCCAAACGGATATGGATTTT 59.599 41.667 0.00 0.00 39.12 1.82
2161 4122 4.400884 TGACCCAAACGGATATGGATTTTG 59.599 41.667 0.00 0.00 39.12 2.44
2162 4123 4.349365 ACCCAAACGGATATGGATTTTGT 58.651 39.130 0.00 0.00 39.12 2.83
2163 4124 4.401202 ACCCAAACGGATATGGATTTTGTC 59.599 41.667 0.00 0.00 39.12 3.18
2164 4125 6.617882 ACCCAAACGGATATGGATTTTGTCC 61.618 44.000 0.00 0.00 40.64 4.02
2176 4137 4.041723 GGATTTTGTCCGCATTTTATCCG 58.958 43.478 0.00 0.00 37.23 4.18
2177 4138 4.439563 GGATTTTGTCCGCATTTTATCCGT 60.440 41.667 0.00 0.00 37.23 4.69
2178 4139 4.506886 TTTTGTCCGCATTTTATCCGTT 57.493 36.364 0.00 0.00 0.00 4.44
2179 4140 4.506886 TTTGTCCGCATTTTATCCGTTT 57.493 36.364 0.00 0.00 0.00 3.60
2180 4141 3.750639 TGTCCGCATTTTATCCGTTTC 57.249 42.857 0.00 0.00 0.00 2.78
2181 4142 2.094575 TGTCCGCATTTTATCCGTTTCG 59.905 45.455 0.00 0.00 0.00 3.46
2211 4172 3.905678 CCTAGCGGAGGCGGACAG 61.906 72.222 0.00 0.00 46.35 3.51
2212 4173 3.905678 CTAGCGGAGGCGGACAGG 61.906 72.222 0.00 0.00 46.35 4.00
2229 4190 4.424711 GGGCTGCCCGTGGATGAA 62.425 66.667 24.16 0.00 32.13 2.57
2230 4191 2.361104 GGCTGCCCGTGGATGAAA 60.361 61.111 7.66 0.00 0.00 2.69
2231 4192 2.700773 GGCTGCCCGTGGATGAAAC 61.701 63.158 7.66 0.00 0.00 2.78
2232 4193 2.700773 GCTGCCCGTGGATGAAACC 61.701 63.158 0.00 0.00 0.00 3.27
2233 4194 1.303236 CTGCCCGTGGATGAAACCA 60.303 57.895 0.00 0.00 37.63 3.67
2234 4195 0.893270 CTGCCCGTGGATGAAACCAA 60.893 55.000 0.00 0.00 41.87 3.67
2235 4196 1.175983 TGCCCGTGGATGAAACCAAC 61.176 55.000 0.00 0.00 41.87 3.77
2236 4197 1.873165 CCCGTGGATGAAACCAACG 59.127 57.895 0.00 0.00 41.87 4.10
2237 4198 1.209127 CCGTGGATGAAACCAACGC 59.791 57.895 0.00 0.00 41.87 4.84
2238 4199 1.511318 CCGTGGATGAAACCAACGCA 61.511 55.000 0.00 0.00 41.87 5.24
2239 4200 0.385473 CGTGGATGAAACCAACGCAC 60.385 55.000 0.00 0.00 41.87 5.34
2240 4201 0.665835 GTGGATGAAACCAACGCACA 59.334 50.000 0.00 0.00 41.87 4.57
2241 4202 1.066303 GTGGATGAAACCAACGCACAA 59.934 47.619 0.00 0.00 41.87 3.33
2242 4203 1.336440 TGGATGAAACCAACGCACAAG 59.664 47.619 0.00 0.00 36.96 3.16
2243 4204 1.606668 GGATGAAACCAACGCACAAGA 59.393 47.619 0.00 0.00 0.00 3.02
2244 4205 2.604614 GGATGAAACCAACGCACAAGAC 60.605 50.000 0.00 0.00 0.00 3.01
2245 4206 1.454201 TGAAACCAACGCACAAGACA 58.546 45.000 0.00 0.00 0.00 3.41
2246 4207 1.813178 TGAAACCAACGCACAAGACAA 59.187 42.857 0.00 0.00 0.00 3.18
2247 4208 2.229062 TGAAACCAACGCACAAGACAAA 59.771 40.909 0.00 0.00 0.00 2.83
2248 4209 3.246619 GAAACCAACGCACAAGACAAAA 58.753 40.909 0.00 0.00 0.00 2.44
2249 4210 3.305398 AACCAACGCACAAGACAAAAA 57.695 38.095 0.00 0.00 0.00 1.94
2269 4230 2.935955 CGGACACGCAAGGTTGTC 59.064 61.111 0.00 0.00 46.39 3.18
2270 4231 2.935955 GGACACGCAAGGTTGTCG 59.064 61.111 5.41 5.41 46.39 4.35
2271 4232 2.604174 GGACACGCAAGGTTGTCGG 61.604 63.158 10.01 3.91 46.39 4.79
2272 4233 3.236618 GACACGCAAGGTTGTCGGC 62.237 63.158 10.01 0.00 46.39 5.54
2275 4236 4.368808 CGCAAGGTTGTCGGCGTG 62.369 66.667 6.85 0.00 44.11 5.34
2276 4237 4.025401 GCAAGGTTGTCGGCGTGG 62.025 66.667 6.85 0.00 0.00 4.94
2277 4238 2.280524 CAAGGTTGTCGGCGTGGA 60.281 61.111 6.85 0.00 0.00 4.02
2278 4239 2.030562 AAGGTTGTCGGCGTGGAG 59.969 61.111 6.85 0.00 0.00 3.86
2279 4240 2.504274 AAGGTTGTCGGCGTGGAGA 61.504 57.895 6.85 0.00 0.00 3.71
2280 4241 1.827399 AAGGTTGTCGGCGTGGAGAT 61.827 55.000 6.85 0.00 0.00 2.75
2281 4242 2.100631 GGTTGTCGGCGTGGAGATG 61.101 63.158 6.85 0.00 0.00 2.90
2282 4243 2.434185 TTGTCGGCGTGGAGATGC 60.434 61.111 6.85 0.00 0.00 3.91
2283 4244 3.233259 TTGTCGGCGTGGAGATGCA 62.233 57.895 6.85 0.00 35.60 3.96
2284 4245 2.434185 GTCGGCGTGGAGATGCAA 60.434 61.111 6.85 0.00 35.60 4.08
2285 4246 2.434185 TCGGCGTGGAGATGCAAC 60.434 61.111 6.85 0.00 35.60 4.17
2286 4247 2.434884 CGGCGTGGAGATGCAACT 60.435 61.111 0.00 0.00 35.60 3.16
2287 4248 2.034879 CGGCGTGGAGATGCAACTT 61.035 57.895 0.00 0.00 35.60 2.66
2288 4249 1.577328 CGGCGTGGAGATGCAACTTT 61.577 55.000 0.00 0.00 35.60 2.66
2289 4250 0.169009 GGCGTGGAGATGCAACTTTC 59.831 55.000 0.00 0.00 35.60 2.62
2290 4251 0.169009 GCGTGGAGATGCAACTTTCC 59.831 55.000 0.00 0.00 33.89 3.13
2291 4252 1.813513 CGTGGAGATGCAACTTTCCT 58.186 50.000 0.00 0.00 0.00 3.36
2292 4253 1.734465 CGTGGAGATGCAACTTTCCTC 59.266 52.381 0.00 0.00 0.00 3.71
2293 4254 2.087646 GTGGAGATGCAACTTTCCTCC 58.912 52.381 0.00 5.02 42.72 4.30
2294 4255 1.004745 TGGAGATGCAACTTTCCTCCC 59.995 52.381 0.00 0.00 41.96 4.30
2295 4256 1.373570 GAGATGCAACTTTCCTCCCG 58.626 55.000 0.00 0.00 0.00 5.14
2296 4257 0.678048 AGATGCAACTTTCCTCCCGC 60.678 55.000 0.00 0.00 0.00 6.13
2297 4258 1.657751 GATGCAACTTTCCTCCCGCC 61.658 60.000 0.00 0.00 0.00 6.13
2298 4259 3.062466 GCAACTTTCCTCCCGCCC 61.062 66.667 0.00 0.00 0.00 6.13
2299 4260 2.361230 CAACTTTCCTCCCGCCCC 60.361 66.667 0.00 0.00 0.00 5.80
2300 4261 4.029809 AACTTTCCTCCCGCCCCG 62.030 66.667 0.00 0.00 0.00 5.73
2747 4708 4.814041 GGCCTCCCTCCCTGAGCT 62.814 72.222 0.00 0.00 0.00 4.09
2748 4709 3.160748 GCCTCCCTCCCTGAGCTC 61.161 72.222 6.82 6.82 0.00 4.09
2749 4710 2.837291 CCTCCCTCCCTGAGCTCG 60.837 72.222 9.64 3.88 0.00 5.03
2750 4711 3.535962 CTCCCTCCCTGAGCTCGC 61.536 72.222 9.64 0.00 0.00 5.03
2753 4714 4.154347 CCTCCCTGAGCTCGCCAC 62.154 72.222 9.64 0.00 0.00 5.01
2754 4715 4.504916 CTCCCTGAGCTCGCCACG 62.505 72.222 9.64 0.00 0.00 4.94
2767 4728 2.676121 CCACGCCCAGCCAATGAA 60.676 61.111 0.00 0.00 0.00 2.57
2768 4729 2.568090 CACGCCCAGCCAATGAAC 59.432 61.111 0.00 0.00 0.00 3.18
2769 4730 1.973281 CACGCCCAGCCAATGAACT 60.973 57.895 0.00 0.00 0.00 3.01
2770 4731 1.973281 ACGCCCAGCCAATGAACTG 60.973 57.895 0.00 0.00 0.00 3.16
2771 4732 2.575461 GCCCAGCCAATGAACTGC 59.425 61.111 0.00 0.00 32.37 4.40
2772 4733 1.980772 GCCCAGCCAATGAACTGCT 60.981 57.895 0.00 0.00 35.25 4.24
2774 4735 4.883026 CAGCCAATGAACTGCTGC 57.117 55.556 0.00 0.00 45.09 5.25
2775 4736 2.264124 CAGCCAATGAACTGCTGCT 58.736 52.632 0.00 0.00 45.09 4.24
2776 4737 0.109272 CAGCCAATGAACTGCTGCTG 60.109 55.000 4.89 4.89 45.09 4.41
2777 4738 1.445582 GCCAATGAACTGCTGCTGC 60.446 57.895 8.89 8.89 40.20 5.25
2778 4739 1.874345 GCCAATGAACTGCTGCTGCT 61.874 55.000 17.00 0.00 40.48 4.24
2779 4740 0.109272 CCAATGAACTGCTGCTGCTG 60.109 55.000 18.66 18.66 42.70 4.41
2825 4786 3.796443 TCGAAGTCGAGGACGCCG 61.796 66.667 0.00 6.53 44.22 6.46
2826 4787 4.099170 CGAAGTCGAGGACGCCGT 62.099 66.667 0.00 0.00 43.02 5.68
2827 4788 2.202453 GAAGTCGAGGACGCCGTC 60.202 66.667 9.15 9.15 37.67 4.79
2833 4794 4.517703 GAGGACGCCGTCGACGAG 62.518 72.222 37.65 30.10 43.02 4.18
2840 4801 3.494378 CCGTCGACGAGGCTTAGA 58.506 61.111 37.65 0.00 43.02 2.10
2841 4802 1.798735 CCGTCGACGAGGCTTAGAA 59.201 57.895 37.65 0.00 43.02 2.10
2842 4803 0.522915 CCGTCGACGAGGCTTAGAAC 60.523 60.000 37.65 0.00 43.02 3.01
2843 4804 0.856490 CGTCGACGAGGCTTAGAACG 60.856 60.000 33.35 0.30 43.02 3.95
2844 4805 0.522915 GTCGACGAGGCTTAGAACGG 60.523 60.000 0.00 0.00 0.00 4.44
2845 4806 1.226603 CGACGAGGCTTAGAACGGG 60.227 63.158 0.00 0.00 0.00 5.28
2846 4807 1.651240 CGACGAGGCTTAGAACGGGA 61.651 60.000 0.00 0.00 0.00 5.14
2847 4808 0.100861 GACGAGGCTTAGAACGGGAG 59.899 60.000 0.00 0.00 0.00 4.30
2848 4809 1.321074 ACGAGGCTTAGAACGGGAGG 61.321 60.000 0.00 0.00 0.00 4.30
2849 4810 1.144276 GAGGCTTAGAACGGGAGGC 59.856 63.158 0.00 0.00 36.33 4.70
2850 4811 2.202892 GGCTTAGAACGGGAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
2851 4812 2.202892 GCTTAGAACGGGAGGCGG 60.203 66.667 0.00 0.00 0.00 6.13
2852 4813 2.202892 CTTAGAACGGGAGGCGGC 60.203 66.667 0.00 0.00 0.00 6.53
2853 4814 4.137872 TTAGAACGGGAGGCGGCG 62.138 66.667 0.51 0.51 0.00 6.46
2941 4902 3.434319 CGGCCTGTGCATGTGGTC 61.434 66.667 0.00 0.00 40.13 4.02
2942 4903 2.034687 GGCCTGTGCATGTGGTCT 59.965 61.111 0.00 0.00 40.13 3.85
2943 4904 1.604593 GGCCTGTGCATGTGGTCTT 60.605 57.895 0.00 0.00 40.13 3.01
2944 4905 1.582968 GCCTGTGCATGTGGTCTTG 59.417 57.895 0.00 0.00 37.47 3.02
2945 4906 1.582968 CCTGTGCATGTGGTCTTGC 59.417 57.895 0.00 0.00 42.57 4.01
2946 4907 1.582968 CTGTGCATGTGGTCTTGCC 59.417 57.895 0.00 0.00 41.89 4.52
2947 4908 2.191354 CTGTGCATGTGGTCTTGCCG 62.191 60.000 0.00 0.00 41.89 5.69
2948 4909 2.672651 TGCATGTGGTCTTGCCGG 60.673 61.111 0.00 0.00 41.89 6.13
2949 4910 2.672996 GCATGTGGTCTTGCCGGT 60.673 61.111 1.90 0.00 41.21 5.28
2950 4911 2.981560 GCATGTGGTCTTGCCGGTG 61.982 63.158 1.90 0.00 41.21 4.94
2951 4912 2.672996 ATGTGGTCTTGCCGGTGC 60.673 61.111 1.90 0.00 41.21 5.01
2962 4923 3.625232 CCGGTGCATCGGTATTCG 58.375 61.111 30.46 3.09 44.60 3.34
2963 4924 2.594962 CCGGTGCATCGGTATTCGC 61.595 63.158 30.46 0.00 44.60 4.70
2964 4925 1.591594 CGGTGCATCGGTATTCGCT 60.592 57.895 12.68 0.00 39.05 4.93
2965 4926 1.548973 CGGTGCATCGGTATTCGCTC 61.549 60.000 12.68 0.00 39.05 5.03
2966 4927 1.548973 GGTGCATCGGTATTCGCTCG 61.549 60.000 0.00 0.00 39.05 5.03
2967 4928 0.870307 GTGCATCGGTATTCGCTCGT 60.870 55.000 0.00 0.00 39.05 4.18
2968 4929 0.664224 TGCATCGGTATTCGCTCGTA 59.336 50.000 0.00 0.00 39.05 3.43
2969 4930 1.050767 GCATCGGTATTCGCTCGTAC 58.949 55.000 0.00 0.00 39.05 3.67
2970 4931 1.315497 CATCGGTATTCGCTCGTACG 58.685 55.000 9.53 9.53 39.05 3.67
2971 4932 0.385223 ATCGGTATTCGCTCGTACGC 60.385 55.000 11.24 0.00 39.05 4.42
2980 4941 4.156622 CTCGTACGCGGTCGCTGA 62.157 66.667 12.47 5.30 39.84 4.26
2981 4942 3.450559 CTCGTACGCGGTCGCTGAT 62.451 63.158 12.47 1.82 39.84 2.90
2982 4943 2.097661 CTCGTACGCGGTCGCTGATA 62.098 60.000 12.47 0.90 39.84 2.15
2983 4944 1.082300 CGTACGCGGTCGCTGATAT 60.082 57.895 12.47 0.00 39.84 1.63
2984 4945 0.659417 CGTACGCGGTCGCTGATATT 60.659 55.000 12.47 0.00 39.84 1.28
2985 4946 1.484356 GTACGCGGTCGCTGATATTT 58.516 50.000 12.47 0.00 39.84 1.40
2986 4947 1.189446 GTACGCGGTCGCTGATATTTG 59.811 52.381 12.47 0.00 39.84 2.32
2987 4948 1.151777 ACGCGGTCGCTGATATTTGG 61.152 55.000 12.47 0.00 39.84 3.28
2988 4949 1.831389 CGCGGTCGCTGATATTTGGG 61.831 60.000 13.51 0.00 39.32 4.12
2989 4950 0.814010 GCGGTCGCTGATATTTGGGT 60.814 55.000 8.20 0.00 38.26 4.51
2990 4951 1.217882 CGGTCGCTGATATTTGGGTC 58.782 55.000 0.00 0.00 0.00 4.46
2991 4952 1.202533 CGGTCGCTGATATTTGGGTCT 60.203 52.381 0.00 0.00 0.00 3.85
2992 4953 2.035449 CGGTCGCTGATATTTGGGTCTA 59.965 50.000 0.00 0.00 0.00 2.59
2993 4954 3.654414 GGTCGCTGATATTTGGGTCTAG 58.346 50.000 0.00 0.00 0.00 2.43
2994 4955 3.555168 GGTCGCTGATATTTGGGTCTAGG 60.555 52.174 0.00 0.00 0.00 3.02
2995 4956 2.632996 TCGCTGATATTTGGGTCTAGGG 59.367 50.000 0.00 0.00 0.00 3.53
2996 4957 2.784347 GCTGATATTTGGGTCTAGGGC 58.216 52.381 0.00 0.00 0.00 5.19
2997 4958 2.872038 GCTGATATTTGGGTCTAGGGCG 60.872 54.545 0.00 0.00 0.00 6.13
2998 4959 1.697432 TGATATTTGGGTCTAGGGCGG 59.303 52.381 0.00 0.00 0.00 6.13
2999 4960 1.975680 GATATTTGGGTCTAGGGCGGA 59.024 52.381 0.00 0.00 0.00 5.54
3000 4961 1.125633 TATTTGGGTCTAGGGCGGAC 58.874 55.000 0.00 0.00 0.00 4.79
3001 4962 0.912487 ATTTGGGTCTAGGGCGGACA 60.912 55.000 0.00 0.00 35.61 4.02
3002 4963 1.833787 TTTGGGTCTAGGGCGGACAC 61.834 60.000 0.00 3.45 37.60 3.67
3003 4964 3.834799 GGGTCTAGGGCGGACACG 61.835 72.222 0.00 0.00 44.63 4.49
3004 4965 2.753043 GGTCTAGGGCGGACACGA 60.753 66.667 0.00 0.00 44.60 4.35
3005 4966 2.772691 GGTCTAGGGCGGACACGAG 61.773 68.421 0.00 0.00 44.60 4.18
3006 4967 3.138798 TCTAGGGCGGACACGAGC 61.139 66.667 0.00 0.00 44.60 5.03
3007 4968 4.554363 CTAGGGCGGACACGAGCG 62.554 72.222 0.00 0.00 44.60 5.03
3037 4998 2.601481 GCATCCGCTTTTATCCATCG 57.399 50.000 0.00 0.00 34.30 3.84
3038 4999 1.400242 GCATCCGCTTTTATCCATCGC 60.400 52.381 0.00 0.00 34.30 4.58
3039 5000 1.136252 CATCCGCTTTTATCCATCGCG 60.136 52.381 0.00 0.00 43.08 5.87
3048 5009 2.994699 TCCATCGCGGACCCATTT 59.005 55.556 6.13 0.00 39.64 2.32
3049 5010 1.451207 TCCATCGCGGACCCATTTG 60.451 57.895 6.13 0.00 39.64 2.32
3050 5011 1.748879 CCATCGCGGACCCATTTGT 60.749 57.895 6.13 0.00 36.56 2.83
3051 5012 1.429021 CATCGCGGACCCATTTGTG 59.571 57.895 6.13 0.00 0.00 3.33
3052 5013 1.024046 CATCGCGGACCCATTTGTGA 61.024 55.000 6.13 0.00 0.00 3.58
3053 5014 1.024579 ATCGCGGACCCATTTGTGAC 61.025 55.000 6.13 0.00 0.00 3.67
3054 5015 1.671054 CGCGGACCCATTTGTGACT 60.671 57.895 0.00 0.00 0.00 3.41
3055 5016 1.635663 CGCGGACCCATTTGTGACTC 61.636 60.000 0.00 0.00 0.00 3.36
3056 5017 0.605319 GCGGACCCATTTGTGACTCA 60.605 55.000 0.00 0.00 0.00 3.41
3057 5018 1.890876 CGGACCCATTTGTGACTCAA 58.109 50.000 0.00 0.00 0.00 3.02
3067 5028 4.320608 TTTGTGACTCAAATTTGGGCTC 57.679 40.909 18.16 14.18 40.56 4.70
3068 5029 2.942804 TGTGACTCAAATTTGGGCTCA 58.057 42.857 18.16 16.37 29.59 4.26
3069 5030 3.295093 TGTGACTCAAATTTGGGCTCAA 58.705 40.909 18.16 0.00 29.59 3.02
3070 5031 3.896888 TGTGACTCAAATTTGGGCTCAAT 59.103 39.130 18.16 0.00 32.28 2.57
3071 5032 4.344679 TGTGACTCAAATTTGGGCTCAATT 59.655 37.500 18.16 0.00 32.28 2.32
3072 5033 5.163322 TGTGACTCAAATTTGGGCTCAATTT 60.163 36.000 18.16 0.00 32.28 1.82
3073 5034 5.178067 GTGACTCAAATTTGGGCTCAATTTG 59.822 40.000 18.16 19.69 35.37 2.32
3074 5035 4.644498 ACTCAAATTTGGGCTCAATTTGG 58.356 39.130 18.16 14.82 35.12 3.28
3075 5036 4.347583 ACTCAAATTTGGGCTCAATTTGGA 59.652 37.500 18.16 17.38 35.12 3.53
3076 5037 5.013391 ACTCAAATTTGGGCTCAATTTGGAT 59.987 36.000 18.16 14.25 35.12 3.41
3077 5038 5.490159 TCAAATTTGGGCTCAATTTGGATC 58.510 37.500 22.74 0.00 35.12 3.36
3078 5039 5.012871 TCAAATTTGGGCTCAATTTGGATCA 59.987 36.000 22.74 9.83 35.12 2.92
3079 5040 5.502089 AATTTGGGCTCAATTTGGATCAA 57.498 34.783 0.00 0.00 32.28 2.57
3080 5041 4.540359 TTTGGGCTCAATTTGGATCAAG 57.460 40.909 0.00 0.00 32.28 3.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 2.045926 CCACGGCCTCTTCCTTGG 60.046 66.667 0.00 0.00 38.88 3.61
5 6 0.955919 GAACCACGGCCTCTTCCTTG 60.956 60.000 0.00 0.00 0.00 3.61
6 7 1.375326 GAACCACGGCCTCTTCCTT 59.625 57.895 0.00 0.00 0.00 3.36
7 8 2.943978 CGAACCACGGCCTCTTCCT 61.944 63.158 0.00 0.00 38.46 3.36
8 9 2.434359 CGAACCACGGCCTCTTCC 60.434 66.667 0.00 0.00 38.46 3.46
9 10 1.446272 CTCGAACCACGGCCTCTTC 60.446 63.158 0.00 0.00 42.82 2.87
10 11 1.469335 TTCTCGAACCACGGCCTCTT 61.469 55.000 0.00 0.00 42.82 2.85
11 12 1.878656 CTTCTCGAACCACGGCCTCT 61.879 60.000 0.00 0.00 42.82 3.69
12 13 1.446272 CTTCTCGAACCACGGCCTC 60.446 63.158 0.00 0.00 42.82 4.70
13 14 1.258445 ATCTTCTCGAACCACGGCCT 61.258 55.000 0.00 0.00 42.82 5.19
14 15 1.084370 CATCTTCTCGAACCACGGCC 61.084 60.000 0.00 0.00 42.82 6.13
15 16 1.696832 GCATCTTCTCGAACCACGGC 61.697 60.000 0.00 0.00 42.82 5.68
16 17 0.389817 TGCATCTTCTCGAACCACGG 60.390 55.000 0.00 0.00 42.82 4.94
17 18 0.994995 CTGCATCTTCTCGAACCACG 59.005 55.000 0.00 0.00 44.09 4.94
18 19 1.363744 CCTGCATCTTCTCGAACCAC 58.636 55.000 0.00 0.00 0.00 4.16
19 20 0.391661 GCCTGCATCTTCTCGAACCA 60.392 55.000 0.00 0.00 0.00 3.67
20 21 1.092345 GGCCTGCATCTTCTCGAACC 61.092 60.000 0.00 0.00 0.00 3.62
21 22 1.424493 CGGCCTGCATCTTCTCGAAC 61.424 60.000 0.00 0.00 0.00 3.95
22 23 1.153568 CGGCCTGCATCTTCTCGAA 60.154 57.895 0.00 0.00 0.00 3.71
23 24 2.052104 TCGGCCTGCATCTTCTCGA 61.052 57.895 0.00 0.00 0.00 4.04
24 25 1.880340 GTCGGCCTGCATCTTCTCG 60.880 63.158 0.00 0.00 0.00 4.04
25 26 0.179062 ATGTCGGCCTGCATCTTCTC 60.179 55.000 0.00 0.00 0.00 2.87
26 27 0.463295 CATGTCGGCCTGCATCTTCT 60.463 55.000 0.00 0.00 0.00 2.85
27 28 2.020131 CATGTCGGCCTGCATCTTC 58.980 57.895 0.00 0.00 0.00 2.87
28 29 2.117156 GCATGTCGGCCTGCATCTT 61.117 57.895 12.62 0.00 36.47 2.40
29 30 2.515523 GCATGTCGGCCTGCATCT 60.516 61.111 12.62 0.00 36.47 2.90
30 31 2.515523 AGCATGTCGGCCTGCATC 60.516 61.111 19.43 7.35 38.47 3.91
31 32 2.515523 GAGCATGTCGGCCTGCAT 60.516 61.111 19.43 9.89 38.47 3.96
32 33 3.549900 TTGAGCATGTCGGCCTGCA 62.550 57.895 19.43 7.94 38.47 4.41
33 34 2.747460 TTGAGCATGTCGGCCTGC 60.747 61.111 9.43 9.43 36.66 4.85
34 35 0.957395 AACTTGAGCATGTCGGCCTG 60.957 55.000 0.00 0.00 0.00 4.85
35 36 0.674895 GAACTTGAGCATGTCGGCCT 60.675 55.000 0.00 0.00 0.00 5.19
36 37 1.796796 GAACTTGAGCATGTCGGCC 59.203 57.895 0.00 0.00 0.00 6.13
37 38 1.014044 TCGAACTTGAGCATGTCGGC 61.014 55.000 0.00 0.00 0.00 5.54
38 39 0.716108 GTCGAACTTGAGCATGTCGG 59.284 55.000 0.00 0.00 0.00 4.79
39 40 0.363512 CGTCGAACTTGAGCATGTCG 59.636 55.000 0.00 0.00 0.00 4.35
40 41 1.387084 GTCGTCGAACTTGAGCATGTC 59.613 52.381 0.00 0.00 0.00 3.06
41 42 1.419374 GTCGTCGAACTTGAGCATGT 58.581 50.000 0.00 0.00 0.00 3.21
42 43 0.363512 CGTCGTCGAACTTGAGCATG 59.636 55.000 0.00 0.00 39.71 4.06
43 44 0.240145 TCGTCGTCGAACTTGAGCAT 59.760 50.000 1.37 0.00 43.34 3.79
44 45 0.385598 CTCGTCGTCGAACTTGAGCA 60.386 55.000 6.19 0.00 45.61 4.26
45 46 0.385723 ACTCGTCGTCGAACTTGAGC 60.386 55.000 6.19 0.00 45.61 4.26
46 47 1.070108 TCACTCGTCGTCGAACTTGAG 60.070 52.381 6.19 5.10 45.61 3.02
47 48 0.939419 TCACTCGTCGTCGAACTTGA 59.061 50.000 6.19 6.43 45.61 3.02
48 49 1.905687 GATCACTCGTCGTCGAACTTG 59.094 52.381 6.19 4.25 45.61 3.16
49 50 1.805345 AGATCACTCGTCGTCGAACTT 59.195 47.619 6.19 0.00 45.61 2.66
50 51 1.440708 AGATCACTCGTCGTCGAACT 58.559 50.000 6.19 0.00 45.61 3.01
51 52 3.281601 CATAGATCACTCGTCGTCGAAC 58.718 50.000 6.19 0.00 45.61 3.95
52 53 2.287103 CCATAGATCACTCGTCGTCGAA 59.713 50.000 6.19 0.00 45.61 3.71
53 54 1.865340 CCATAGATCACTCGTCGTCGA 59.135 52.381 4.42 4.42 44.12 4.20
54 55 1.660614 GCCATAGATCACTCGTCGTCG 60.661 57.143 0.00 0.00 38.55 5.12
55 56 1.660614 CGCCATAGATCACTCGTCGTC 60.661 57.143 0.00 0.00 0.00 4.20
56 57 0.308068 CGCCATAGATCACTCGTCGT 59.692 55.000 0.00 0.00 0.00 4.34
57 58 0.386100 CCGCCATAGATCACTCGTCG 60.386 60.000 0.00 0.00 0.00 5.12
58 59 0.664767 GCCGCCATAGATCACTCGTC 60.665 60.000 0.00 0.00 0.00 4.20
59 60 1.364171 GCCGCCATAGATCACTCGT 59.636 57.895 0.00 0.00 0.00 4.18
60 61 1.730902 CGCCGCCATAGATCACTCG 60.731 63.158 0.00 0.00 0.00 4.18
61 62 0.387878 CTCGCCGCCATAGATCACTC 60.388 60.000 0.00 0.00 0.00 3.51
62 63 1.662608 CTCGCCGCCATAGATCACT 59.337 57.895 0.00 0.00 0.00 3.41
63 64 1.373497 CCTCGCCGCCATAGATCAC 60.373 63.158 0.00 0.00 0.00 3.06
64 65 1.530655 TCCTCGCCGCCATAGATCA 60.531 57.895 0.00 0.00 0.00 2.92
65 66 1.080434 GTCCTCGCCGCCATAGATC 60.080 63.158 0.00 0.00 0.00 2.75
66 67 2.574955 GGTCCTCGCCGCCATAGAT 61.575 63.158 0.00 0.00 0.00 1.98
67 68 3.224324 GGTCCTCGCCGCCATAGA 61.224 66.667 0.00 0.00 0.00 1.98
68 69 2.771763 GATGGTCCTCGCCGCCATAG 62.772 65.000 0.00 0.00 42.48 2.23
69 70 2.842462 ATGGTCCTCGCCGCCATA 60.842 61.111 0.00 0.00 40.83 2.74
70 71 4.241555 GATGGTCCTCGCCGCCAT 62.242 66.667 0.00 0.00 44.82 4.40
72 73 3.682292 AAAGATGGTCCTCGCCGCC 62.682 63.158 0.00 0.00 0.00 6.13
73 74 1.706287 GAAAAGATGGTCCTCGCCGC 61.706 60.000 0.00 0.00 0.00 6.53
74 75 1.421410 CGAAAAGATGGTCCTCGCCG 61.421 60.000 0.00 0.00 0.00 6.46
75 76 0.391263 ACGAAAAGATGGTCCTCGCC 60.391 55.000 0.00 0.00 32.86 5.54
76 77 2.288961 TACGAAAAGATGGTCCTCGC 57.711 50.000 0.00 0.00 32.86 5.03
77 78 2.540101 GCATACGAAAAGATGGTCCTCG 59.460 50.000 0.00 0.00 35.68 4.63
78 79 2.872858 GGCATACGAAAAGATGGTCCTC 59.127 50.000 0.00 0.00 0.00 3.71
79 80 2.919228 GGCATACGAAAAGATGGTCCT 58.081 47.619 0.00 0.00 0.00 3.85
92 93 3.195002 CACACCTGCCGGCATACG 61.195 66.667 32.87 22.55 43.80 3.06
93 94 3.508840 GCACACCTGCCGGCATAC 61.509 66.667 32.87 12.06 37.45 2.39
102 103 3.434319 GTCATGCCGGCACACCTG 61.434 66.667 35.50 26.35 0.00 4.00
103 104 4.722700 GGTCATGCCGGCACACCT 62.723 66.667 36.54 21.00 32.36 4.00
105 106 3.737172 GTGGTCATGCCGGCACAC 61.737 66.667 35.50 29.83 41.21 3.82
110 111 4.838152 CTCCCGTGGTCATGCCGG 62.838 72.222 0.00 0.00 41.21 6.13
125 126 4.760047 ACCACACCATCGCGGCTC 62.760 66.667 6.13 0.00 39.03 4.70
126 127 4.760047 GACCACACCATCGCGGCT 62.760 66.667 6.13 0.00 39.03 5.52
128 129 3.925362 TTCGACCACACCATCGCGG 62.925 63.158 6.13 0.00 38.24 6.46
129 130 2.431771 TTCGACCACACCATCGCG 60.432 61.111 0.00 0.00 38.24 5.87
130 131 1.352156 GAGTTCGACCACACCATCGC 61.352 60.000 0.00 0.00 38.24 4.58
131 132 0.038618 TGAGTTCGACCACACCATCG 60.039 55.000 0.00 0.00 39.72 3.84
132 133 2.069273 CTTGAGTTCGACCACACCATC 58.931 52.381 0.00 0.00 0.00 3.51
133 134 1.416401 ACTTGAGTTCGACCACACCAT 59.584 47.619 0.00 0.00 0.00 3.55
134 135 0.828022 ACTTGAGTTCGACCACACCA 59.172 50.000 0.00 0.00 0.00 4.17
135 136 1.499049 GACTTGAGTTCGACCACACC 58.501 55.000 0.00 0.00 0.00 4.16
136 137 1.499049 GGACTTGAGTTCGACCACAC 58.501 55.000 0.00 0.00 0.00 3.82
137 138 0.391597 GGGACTTGAGTTCGACCACA 59.608 55.000 0.00 0.00 0.00 4.17
138 139 0.391597 TGGGACTTGAGTTCGACCAC 59.608 55.000 0.00 0.00 0.00 4.16
139 140 0.391597 GTGGGACTTGAGTTCGACCA 59.608 55.000 0.00 0.00 0.00 4.02
140 141 0.320508 GGTGGGACTTGAGTTCGACC 60.321 60.000 7.72 7.72 43.60 4.79
141 142 0.680061 AGGTGGGACTTGAGTTCGAC 59.320 55.000 0.00 0.00 32.27 4.20
142 143 1.420430 AAGGTGGGACTTGAGTTCGA 58.580 50.000 0.00 0.00 0.00 3.71
143 144 2.256117 AAAGGTGGGACTTGAGTTCG 57.744 50.000 0.00 0.00 0.00 3.95
144 145 3.565902 CAGAAAAGGTGGGACTTGAGTTC 59.434 47.826 0.00 0.00 0.00 3.01
145 146 3.053619 ACAGAAAAGGTGGGACTTGAGTT 60.054 43.478 0.00 0.00 0.00 3.01
146 147 2.509964 ACAGAAAAGGTGGGACTTGAGT 59.490 45.455 0.00 0.00 0.00 3.41
147 148 2.880890 CACAGAAAAGGTGGGACTTGAG 59.119 50.000 0.00 0.00 32.65 3.02
148 149 2.241176 ACACAGAAAAGGTGGGACTTGA 59.759 45.455 0.00 0.00 40.54 3.02
149 150 2.358898 CACACAGAAAAGGTGGGACTTG 59.641 50.000 0.00 0.00 42.26 3.16
150 151 2.654863 CACACAGAAAAGGTGGGACTT 58.345 47.619 0.00 0.00 42.26 3.01
151 152 1.750682 GCACACAGAAAAGGTGGGACT 60.751 52.381 0.00 0.00 42.26 3.85
152 153 0.668535 GCACACAGAAAAGGTGGGAC 59.331 55.000 0.00 0.00 42.26 4.46
153 154 0.550914 AGCACACAGAAAAGGTGGGA 59.449 50.000 0.00 0.00 42.26 4.37
154 155 0.670162 CAGCACACAGAAAAGGTGGG 59.330 55.000 0.00 0.00 42.56 4.61
155 156 0.670162 CCAGCACACAGAAAAGGTGG 59.330 55.000 0.00 0.00 42.38 4.61
156 157 0.031178 GCCAGCACACAGAAAAGGTG 59.969 55.000 0.00 0.00 41.95 4.00
157 158 0.395586 TGCCAGCACACAGAAAAGGT 60.396 50.000 0.00 0.00 0.00 3.50
158 159 0.963962 ATGCCAGCACACAGAAAAGG 59.036 50.000 0.00 0.00 0.00 3.11
159 160 1.338973 ACATGCCAGCACACAGAAAAG 59.661 47.619 0.00 0.00 0.00 2.27
160 161 1.067364 CACATGCCAGCACACAGAAAA 59.933 47.619 0.00 0.00 0.00 2.29
161 162 0.669619 CACATGCCAGCACACAGAAA 59.330 50.000 0.00 0.00 0.00 2.52
162 163 0.466007 ACACATGCCAGCACACAGAA 60.466 50.000 0.00 0.00 0.00 3.02
163 164 1.148949 ACACATGCCAGCACACAGA 59.851 52.632 0.00 0.00 0.00 3.41
164 165 1.284715 CACACATGCCAGCACACAG 59.715 57.895 0.00 0.00 0.00 3.66
165 166 2.847754 GCACACATGCCAGCACACA 61.848 57.895 0.00 0.00 46.97 3.72
166 167 2.049802 GCACACATGCCAGCACAC 60.050 61.111 0.00 0.00 46.97 3.82
200 201 1.230635 ACCACAGTTCATGCTGACGC 61.231 55.000 7.27 0.00 39.62 5.19
201 202 0.514255 CACCACAGTTCATGCTGACG 59.486 55.000 7.27 0.26 39.62 4.35
202 203 1.882912 TCACCACAGTTCATGCTGAC 58.117 50.000 7.27 0.00 39.62 3.51
203 204 2.865119 ATCACCACAGTTCATGCTGA 57.135 45.000 7.27 0.00 39.62 4.26
204 205 5.571784 AAATATCACCACAGTTCATGCTG 57.428 39.130 0.00 0.00 41.92 4.41
205 206 5.948162 AGAAAATATCACCACAGTTCATGCT 59.052 36.000 0.00 0.00 0.00 3.79
206 207 6.032094 CAGAAAATATCACCACAGTTCATGC 58.968 40.000 0.00 0.00 0.00 4.06
207 208 7.381766 TCAGAAAATATCACCACAGTTCATG 57.618 36.000 0.00 0.00 0.00 3.07
208 209 7.362401 GCTTCAGAAAATATCACCACAGTTCAT 60.362 37.037 0.00 0.00 0.00 2.57
209 210 6.072508 GCTTCAGAAAATATCACCACAGTTCA 60.073 38.462 0.00 0.00 0.00 3.18
210 211 6.317857 GCTTCAGAAAATATCACCACAGTTC 58.682 40.000 0.00 0.00 0.00 3.01
211 212 5.183904 GGCTTCAGAAAATATCACCACAGTT 59.816 40.000 0.00 0.00 0.00 3.16
212 213 4.702131 GGCTTCAGAAAATATCACCACAGT 59.298 41.667 0.00 0.00 0.00 3.55
213 214 4.201851 CGGCTTCAGAAAATATCACCACAG 60.202 45.833 0.00 0.00 0.00 3.66
214 215 3.689161 CGGCTTCAGAAAATATCACCACA 59.311 43.478 0.00 0.00 0.00 4.17
215 216 3.065371 CCGGCTTCAGAAAATATCACCAC 59.935 47.826 0.00 0.00 0.00 4.16
216 217 3.278574 CCGGCTTCAGAAAATATCACCA 58.721 45.455 0.00 0.00 0.00 4.17
217 218 2.033424 GCCGGCTTCAGAAAATATCACC 59.967 50.000 22.15 0.00 0.00 4.02
218 219 2.682856 TGCCGGCTTCAGAAAATATCAC 59.317 45.455 29.70 0.00 0.00 3.06
219 220 2.997980 TGCCGGCTTCAGAAAATATCA 58.002 42.857 29.70 0.00 0.00 2.15
220 221 4.202050 ACAATGCCGGCTTCAGAAAATATC 60.202 41.667 29.70 0.00 0.00 1.63
221 222 3.701040 ACAATGCCGGCTTCAGAAAATAT 59.299 39.130 29.70 5.23 0.00 1.28
222 223 3.088532 ACAATGCCGGCTTCAGAAAATA 58.911 40.909 29.70 2.45 0.00 1.40
223 224 1.895131 ACAATGCCGGCTTCAGAAAAT 59.105 42.857 29.70 6.94 0.00 1.82
224 225 1.327303 ACAATGCCGGCTTCAGAAAA 58.673 45.000 29.70 4.25 0.00 2.29
225 226 2.192664 TACAATGCCGGCTTCAGAAA 57.807 45.000 29.70 5.17 0.00 2.52
226 227 2.016318 CATACAATGCCGGCTTCAGAA 58.984 47.619 29.70 6.08 0.00 3.02
227 228 1.667236 CATACAATGCCGGCTTCAGA 58.333 50.000 29.70 7.00 0.00 3.27
238 239 2.328989 CAGCGCCGGCATACAATG 59.671 61.111 28.98 9.29 43.41 2.82
239 240 2.901840 CCAGCGCCGGCATACAAT 60.902 61.111 28.98 1.24 43.41 2.71
256 257 3.285215 CTCATGCCGGCTCCATGC 61.285 66.667 29.70 0.00 39.83 4.06
257 258 1.890979 GTCTCATGCCGGCTCCATG 60.891 63.158 29.70 22.58 41.03 3.66
258 259 1.913951 TTGTCTCATGCCGGCTCCAT 61.914 55.000 29.70 10.42 0.00 3.41
259 260 2.526450 CTTGTCTCATGCCGGCTCCA 62.526 60.000 29.70 7.94 0.00 3.86
260 261 1.817099 CTTGTCTCATGCCGGCTCC 60.817 63.158 29.70 9.18 0.00 4.70
261 262 1.817099 CCTTGTCTCATGCCGGCTC 60.817 63.158 29.70 11.18 0.00 4.70
262 263 2.270205 CCTTGTCTCATGCCGGCT 59.730 61.111 29.70 10.60 0.00 5.52
263 264 3.512516 GCCTTGTCTCATGCCGGC 61.513 66.667 22.73 22.73 0.00 6.13
264 265 2.825836 GGCCTTGTCTCATGCCGG 60.826 66.667 0.00 0.00 33.59 6.13
266 267 3.512516 GCGGCCTTGTCTCATGCC 61.513 66.667 0.00 0.00 40.54 4.40
267 268 3.512516 GGCGGCCTTGTCTCATGC 61.513 66.667 12.87 0.00 0.00 4.06
268 269 3.197790 CGGCGGCCTTGTCTCATG 61.198 66.667 18.34 0.00 0.00 3.07
269 270 4.473520 CCGGCGGCCTTGTCTCAT 62.474 66.667 15.42 0.00 0.00 2.90
295 296 5.146696 TTTTAAATAAAAAGAGCCCGCGGC 61.147 41.667 22.85 16.01 39.46 6.53
296 297 3.768468 TTAAATAAAAAGAGCCCGCGG 57.232 42.857 21.04 21.04 0.00 6.46
315 316 8.458843 CCTATTTCATGTCCGTATTCAACTTTT 58.541 33.333 0.00 0.00 0.00 2.27
316 317 7.610305 ACCTATTTCATGTCCGTATTCAACTTT 59.390 33.333 0.00 0.00 0.00 2.66
317 318 7.110155 ACCTATTTCATGTCCGTATTCAACTT 58.890 34.615 0.00 0.00 0.00 2.66
318 319 6.650120 ACCTATTTCATGTCCGTATTCAACT 58.350 36.000 0.00 0.00 0.00 3.16
319 320 6.292168 CGACCTATTTCATGTCCGTATTCAAC 60.292 42.308 0.00 0.00 0.00 3.18
320 321 5.751509 CGACCTATTTCATGTCCGTATTCAA 59.248 40.000 0.00 0.00 0.00 2.69
321 322 5.286438 CGACCTATTTCATGTCCGTATTCA 58.714 41.667 0.00 0.00 0.00 2.57
322 323 4.684703 CCGACCTATTTCATGTCCGTATTC 59.315 45.833 0.00 0.00 0.00 1.75
323 324 4.628074 CCGACCTATTTCATGTCCGTATT 58.372 43.478 0.00 0.00 0.00 1.89
324 325 3.554337 GCCGACCTATTTCATGTCCGTAT 60.554 47.826 0.00 0.00 0.00 3.06
325 326 2.223876 GCCGACCTATTTCATGTCCGTA 60.224 50.000 0.00 0.00 0.00 4.02
326 327 1.472728 GCCGACCTATTTCATGTCCGT 60.473 52.381 0.00 0.00 0.00 4.69
327 328 1.217882 GCCGACCTATTTCATGTCCG 58.782 55.000 0.00 0.00 0.00 4.79
328 329 1.217882 CGCCGACCTATTTCATGTCC 58.782 55.000 0.00 0.00 0.00 4.02
329 330 0.582005 GCGCCGACCTATTTCATGTC 59.418 55.000 0.00 0.00 0.00 3.06
330 331 1.151777 CGCGCCGACCTATTTCATGT 61.152 55.000 0.00 0.00 0.00 3.21
331 332 1.151777 ACGCGCCGACCTATTTCATG 61.152 55.000 5.73 0.00 0.00 3.07
332 333 0.461339 AACGCGCCGACCTATTTCAT 60.461 50.000 5.73 0.00 0.00 2.57
333 334 1.079681 AACGCGCCGACCTATTTCA 60.080 52.632 5.73 0.00 0.00 2.69
334 335 1.347221 CAACGCGCCGACCTATTTC 59.653 57.895 5.73 0.00 0.00 2.17
335 336 2.104253 CCAACGCGCCGACCTATTT 61.104 57.895 5.73 0.00 0.00 1.40
336 337 2.510691 CCAACGCGCCGACCTATT 60.511 61.111 5.73 0.00 0.00 1.73
337 338 4.524318 CCCAACGCGCCGACCTAT 62.524 66.667 5.73 0.00 0.00 2.57
355 356 3.055719 ATTTGGGTCGGCAGTGCG 61.056 61.111 9.45 4.79 0.00 5.34
356 357 2.568090 CATTTGGGTCGGCAGTGC 59.432 61.111 6.55 6.55 0.00 4.40
357 358 1.597797 ATGCATTTGGGTCGGCAGTG 61.598 55.000 0.00 0.00 39.95 3.66
358 359 0.034574 TATGCATTTGGGTCGGCAGT 60.035 50.000 3.54 0.00 39.95 4.40
359 360 1.102154 TTATGCATTTGGGTCGGCAG 58.898 50.000 3.54 0.00 39.95 4.85
360 361 0.814457 GTTATGCATTTGGGTCGGCA 59.186 50.000 3.54 0.00 41.00 5.69
361 362 1.102978 AGTTATGCATTTGGGTCGGC 58.897 50.000 3.54 0.00 0.00 5.54
362 363 1.405105 CCAGTTATGCATTTGGGTCGG 59.595 52.381 3.54 0.00 0.00 4.79
363 364 1.405105 CCCAGTTATGCATTTGGGTCG 59.595 52.381 24.78 9.01 44.27 4.79
367 368 0.102844 CCGCCCAGTTATGCATTTGG 59.897 55.000 3.54 10.86 0.00 3.28
368 369 1.102154 TCCGCCCAGTTATGCATTTG 58.898 50.000 3.54 1.32 0.00 2.32
369 370 1.682854 CATCCGCCCAGTTATGCATTT 59.317 47.619 3.54 0.00 0.00 2.32
370 371 1.321474 CATCCGCCCAGTTATGCATT 58.679 50.000 3.54 0.00 0.00 3.56
371 372 1.174712 GCATCCGCCCAGTTATGCAT 61.175 55.000 3.79 3.79 43.30 3.96
372 373 1.823470 GCATCCGCCCAGTTATGCA 60.823 57.895 0.00 0.00 43.30 3.96
373 374 3.034030 GCATCCGCCCAGTTATGC 58.966 61.111 0.00 0.00 38.09 3.14
398 399 4.629523 TCCGTTTGGGTCGGCCAC 62.630 66.667 9.07 0.00 46.49 5.01
399 400 4.629523 GTCCGTTTGGGTCGGCCA 62.630 66.667 9.07 0.00 46.49 5.36
404 405 2.735857 CCGACGTCCGTTTGGGTC 60.736 66.667 10.58 0.00 37.00 4.46
405 406 4.974989 GCCGACGTCCGTTTGGGT 62.975 66.667 10.58 0.00 37.00 4.51
421 422 2.521958 TTAGAGCAACTCCAGCGGGC 62.522 60.000 0.00 0.00 37.01 6.13
422 423 0.741221 GTTAGAGCAACTCCAGCGGG 60.741 60.000 0.00 0.00 37.01 6.13
423 424 0.247736 AGTTAGAGCAACTCCAGCGG 59.752 55.000 0.00 0.00 44.48 5.52
424 425 1.067565 TCAGTTAGAGCAACTCCAGCG 60.068 52.381 0.00 0.00 44.48 5.18
425 426 2.751166 TCAGTTAGAGCAACTCCAGC 57.249 50.000 0.00 0.00 44.48 4.85
426 427 4.431809 CTGATCAGTTAGAGCAACTCCAG 58.568 47.826 14.95 0.00 44.48 3.86
427 428 3.368843 GCTGATCAGTTAGAGCAACTCCA 60.369 47.826 23.38 0.00 44.48 3.86
428 429 3.194062 GCTGATCAGTTAGAGCAACTCC 58.806 50.000 23.38 0.00 44.48 3.85
429 430 2.857152 CGCTGATCAGTTAGAGCAACTC 59.143 50.000 23.38 1.87 44.48 3.01
431 432 2.857152 CTCGCTGATCAGTTAGAGCAAC 59.143 50.000 23.38 3.08 43.01 4.17
432 433 2.493675 ACTCGCTGATCAGTTAGAGCAA 59.506 45.455 28.46 4.44 43.01 3.91
433 434 2.095461 ACTCGCTGATCAGTTAGAGCA 58.905 47.619 28.46 8.60 41.05 4.26
434 435 2.458951 CACTCGCTGATCAGTTAGAGC 58.541 52.381 28.46 15.28 33.38 4.09
435 436 2.685388 TCCACTCGCTGATCAGTTAGAG 59.315 50.000 27.63 27.63 34.91 2.43
477 478 3.369787 CCCACTTGCTGATGAGTGACATA 60.370 47.826 5.15 0.00 44.65 2.29
487 488 2.531522 GCAAAAACCCACTTGCTGAT 57.468 45.000 0.00 0.00 43.68 2.90
499 500 1.871039 TCACGACCAGCTAGCAAAAAC 59.129 47.619 18.83 3.33 0.00 2.43
621 630 3.532542 GGGGACGAGAAAGAAACCTATG 58.467 50.000 0.00 0.00 0.00 2.23
622 631 2.504585 GGGGGACGAGAAAGAAACCTAT 59.495 50.000 0.00 0.00 0.00 2.57
659 673 4.035102 GCTTCGGTTGGGCTCCCT 62.035 66.667 6.50 0.00 36.94 4.20
717 745 4.179579 GAGGATTTGCGCGTGGGC 62.180 66.667 8.43 1.46 0.00 5.36
735 763 3.103911 GTTGGCGTCGTCGTCCAG 61.104 66.667 14.80 0.00 41.33 3.86
800 828 2.405594 CGAGGAGCGAGAGGAACG 59.594 66.667 0.00 0.00 44.57 3.95
801 829 2.103340 GCGAGGAGCGAGAGGAAC 59.897 66.667 0.00 0.00 44.57 3.62
830 858 4.936823 GTGACGACGGTGGCGTGT 62.937 66.667 0.80 0.00 42.77 4.49
926 968 2.289072 CGAGGAATGAGAGTTGGTGTGT 60.289 50.000 0.00 0.00 0.00 3.72
1883 3831 1.474478 TGCTCGATCTCCTTGACTCAC 59.526 52.381 0.00 0.00 0.00 3.51
1924 3872 8.894768 AGCAGAAATGGAATTATACTAGTGTC 57.105 34.615 5.39 0.00 33.67 3.67
1976 3933 8.124199 GTCGTTGTTGAGTTATAACAAAGGAAA 58.876 33.333 17.65 2.63 46.10 3.13
2020 3979 8.615878 TGAATCCTTTCGACAAAGAAATAGAA 57.384 30.769 0.00 0.00 41.60 2.10
2022 3981 9.922305 GTATGAATCCTTTCGACAAAGAAATAG 57.078 33.333 0.00 0.00 41.60 1.73
2024 3983 8.335532 TGTATGAATCCTTTCGACAAAGAAAT 57.664 30.769 0.00 0.00 41.60 2.17
2075 4036 2.991540 GGCTGCCCAGGTTCAACC 60.992 66.667 7.66 0.00 38.99 3.77
2121 4082 2.032178 GGTCACTGTGTTGAAGTTGCTC 59.968 50.000 7.79 0.00 0.00 4.26
2124 4085 2.364632 TGGGTCACTGTGTTGAAGTTG 58.635 47.619 7.79 0.00 0.00 3.16
2126 4087 2.752903 GTTTGGGTCACTGTGTTGAAGT 59.247 45.455 7.79 0.00 0.00 3.01
2127 4088 2.223249 CGTTTGGGTCACTGTGTTGAAG 60.223 50.000 7.79 0.00 0.00 3.02
2129 4090 1.374560 CGTTTGGGTCACTGTGTTGA 58.625 50.000 7.79 0.00 0.00 3.18
2130 4091 0.380378 CCGTTTGGGTCACTGTGTTG 59.620 55.000 7.79 0.00 0.00 3.33
2131 4092 0.253610 TCCGTTTGGGTCACTGTGTT 59.746 50.000 7.79 0.00 37.00 3.32
2132 4093 0.472471 ATCCGTTTGGGTCACTGTGT 59.528 50.000 7.79 0.00 37.00 3.72
2133 4094 2.465860 TATCCGTTTGGGTCACTGTG 57.534 50.000 0.17 0.17 37.00 3.66
2134 4095 2.355716 CCATATCCGTTTGGGTCACTGT 60.356 50.000 0.00 0.00 37.00 3.55
2135 4096 2.093181 TCCATATCCGTTTGGGTCACTG 60.093 50.000 0.00 0.00 37.00 3.66
2136 4097 2.193127 TCCATATCCGTTTGGGTCACT 58.807 47.619 0.00 0.00 37.00 3.41
2137 4098 2.702592 TCCATATCCGTTTGGGTCAC 57.297 50.000 0.00 0.00 37.00 3.67
2138 4099 3.943671 AATCCATATCCGTTTGGGTCA 57.056 42.857 0.00 0.00 37.00 4.02
2139 4100 4.401202 ACAAAATCCATATCCGTTTGGGTC 59.599 41.667 0.00 0.00 34.28 4.46
2140 4101 4.349365 ACAAAATCCATATCCGTTTGGGT 58.651 39.130 0.00 0.00 34.28 4.51
2141 4102 4.932146 GACAAAATCCATATCCGTTTGGG 58.068 43.478 0.00 0.00 34.28 4.12
2154 4115 4.041723 CGGATAAAATGCGGACAAAATCC 58.958 43.478 0.00 0.00 45.20 3.01
2195 4156 3.905678 CCTGTCCGCCTCCGCTAG 61.906 72.222 0.00 0.00 0.00 3.42
2212 4173 3.936772 TTTCATCCACGGGCAGCCC 62.937 63.158 22.33 22.33 41.09 5.19
2213 4174 2.361104 TTTCATCCACGGGCAGCC 60.361 61.111 1.26 1.26 0.00 4.85
2214 4175 2.700773 GGTTTCATCCACGGGCAGC 61.701 63.158 0.00 0.00 0.00 5.25
2215 4176 0.893270 TTGGTTTCATCCACGGGCAG 60.893 55.000 0.00 0.00 37.20 4.85
2216 4177 1.151679 TTGGTTTCATCCACGGGCA 59.848 52.632 0.00 0.00 37.20 5.36
2217 4178 1.584495 GTTGGTTTCATCCACGGGC 59.416 57.895 0.00 0.00 37.20 6.13
2218 4179 1.873165 CGTTGGTTTCATCCACGGG 59.127 57.895 0.00 0.00 37.20 5.28
2219 4180 1.209127 GCGTTGGTTTCATCCACGG 59.791 57.895 0.00 0.00 37.20 4.94
2220 4181 0.385473 GTGCGTTGGTTTCATCCACG 60.385 55.000 0.00 0.00 37.20 4.94
2221 4182 0.665835 TGTGCGTTGGTTTCATCCAC 59.334 50.000 0.00 0.00 37.20 4.02
2222 4183 1.336440 CTTGTGCGTTGGTTTCATCCA 59.664 47.619 0.00 0.00 35.49 3.41
2223 4184 1.606668 TCTTGTGCGTTGGTTTCATCC 59.393 47.619 0.00 0.00 0.00 3.51
2224 4185 2.032799 TGTCTTGTGCGTTGGTTTCATC 59.967 45.455 0.00 0.00 0.00 2.92
2225 4186 2.020720 TGTCTTGTGCGTTGGTTTCAT 58.979 42.857 0.00 0.00 0.00 2.57
2226 4187 1.454201 TGTCTTGTGCGTTGGTTTCA 58.546 45.000 0.00 0.00 0.00 2.69
2227 4188 2.553079 TTGTCTTGTGCGTTGGTTTC 57.447 45.000 0.00 0.00 0.00 2.78
2228 4189 3.305398 TTTTGTCTTGTGCGTTGGTTT 57.695 38.095 0.00 0.00 0.00 3.27
2229 4190 3.305398 TTTTTGTCTTGTGCGTTGGTT 57.695 38.095 0.00 0.00 0.00 3.67
2252 4213 2.935955 GACAACCTTGCGTGTCCG 59.064 61.111 0.00 0.00 37.07 4.79
2253 4214 2.604174 CCGACAACCTTGCGTGTCC 61.604 63.158 0.00 0.00 0.00 4.02
2254 4215 2.935955 CCGACAACCTTGCGTGTC 59.064 61.111 0.00 0.00 0.00 3.67
2255 4216 3.276846 GCCGACAACCTTGCGTGT 61.277 61.111 0.00 0.00 0.00 4.49
2256 4217 4.368808 CGCCGACAACCTTGCGTG 62.369 66.667 0.00 0.00 41.95 5.34
2259 4220 4.025401 CCACGCCGACAACCTTGC 62.025 66.667 0.00 0.00 0.00 4.01
2260 4221 2.280524 TCCACGCCGACAACCTTG 60.281 61.111 0.00 0.00 0.00 3.61
2261 4222 1.827399 ATCTCCACGCCGACAACCTT 61.827 55.000 0.00 0.00 0.00 3.50
2262 4223 2.283529 ATCTCCACGCCGACAACCT 61.284 57.895 0.00 0.00 0.00 3.50
2263 4224 2.100631 CATCTCCACGCCGACAACC 61.101 63.158 0.00 0.00 0.00 3.77
2264 4225 2.740714 GCATCTCCACGCCGACAAC 61.741 63.158 0.00 0.00 0.00 3.32
2265 4226 2.434185 GCATCTCCACGCCGACAA 60.434 61.111 0.00 0.00 0.00 3.18
2266 4227 3.233259 TTGCATCTCCACGCCGACA 62.233 57.895 0.00 0.00 0.00 4.35
2267 4228 2.434185 TTGCATCTCCACGCCGAC 60.434 61.111 0.00 0.00 0.00 4.79
2268 4229 2.434185 GTTGCATCTCCACGCCGA 60.434 61.111 0.00 0.00 0.00 5.54
2269 4230 1.577328 AAAGTTGCATCTCCACGCCG 61.577 55.000 0.00 0.00 0.00 6.46
2270 4231 0.169009 GAAAGTTGCATCTCCACGCC 59.831 55.000 0.00 0.00 0.00 5.68
2271 4232 0.169009 GGAAAGTTGCATCTCCACGC 59.831 55.000 0.00 0.00 0.00 5.34
2272 4233 1.734465 GAGGAAAGTTGCATCTCCACG 59.266 52.381 0.00 0.00 0.00 4.94
2273 4234 2.087646 GGAGGAAAGTTGCATCTCCAC 58.912 52.381 0.00 0.00 42.49 4.02
2274 4235 1.004745 GGGAGGAAAGTTGCATCTCCA 59.995 52.381 8.09 0.00 44.17 3.86
2275 4236 1.756430 GGGAGGAAAGTTGCATCTCC 58.244 55.000 0.00 0.00 42.28 3.71
2276 4237 1.373570 CGGGAGGAAAGTTGCATCTC 58.626 55.000 0.00 0.00 0.00 2.75
2277 4238 0.678048 GCGGGAGGAAAGTTGCATCT 60.678 55.000 0.00 0.00 0.00 2.90
2278 4239 1.657751 GGCGGGAGGAAAGTTGCATC 61.658 60.000 0.00 0.00 0.00 3.91
2279 4240 1.678970 GGCGGGAGGAAAGTTGCAT 60.679 57.895 0.00 0.00 0.00 3.96
2280 4241 2.282180 GGCGGGAGGAAAGTTGCA 60.282 61.111 0.00 0.00 0.00 4.08
2281 4242 3.062466 GGGCGGGAGGAAAGTTGC 61.062 66.667 0.00 0.00 0.00 4.17
2282 4243 2.361230 GGGGCGGGAGGAAAGTTG 60.361 66.667 0.00 0.00 0.00 3.16
2283 4244 4.029809 CGGGGCGGGAGGAAAGTT 62.030 66.667 0.00 0.00 0.00 2.66
2730 4691 4.814041 AGCTCAGGGAGGGAGGCC 62.814 72.222 0.00 0.00 32.96 5.19
2731 4692 3.160748 GAGCTCAGGGAGGGAGGC 61.161 72.222 9.40 0.00 32.96 4.70
2732 4693 2.837291 CGAGCTCAGGGAGGGAGG 60.837 72.222 15.40 0.00 32.96 4.30
2733 4694 3.535962 GCGAGCTCAGGGAGGGAG 61.536 72.222 15.40 0.00 35.47 4.30
2736 4697 4.154347 GTGGCGAGCTCAGGGAGG 62.154 72.222 15.40 0.00 0.00 4.30
2737 4698 4.504916 CGTGGCGAGCTCAGGGAG 62.505 72.222 15.40 0.00 0.00 4.30
2750 4711 2.676121 TTCATTGGCTGGGCGTGG 60.676 61.111 0.00 0.00 0.00 4.94
2751 4712 1.973281 AGTTCATTGGCTGGGCGTG 60.973 57.895 0.00 0.00 0.00 5.34
2752 4713 1.973281 CAGTTCATTGGCTGGGCGT 60.973 57.895 0.00 0.00 0.00 5.68
2753 4714 2.879907 CAGTTCATTGGCTGGGCG 59.120 61.111 0.00 0.00 0.00 6.13
2754 4715 1.980772 AGCAGTTCATTGGCTGGGC 60.981 57.895 9.86 0.00 36.34 5.36
2755 4716 4.428845 AGCAGTTCATTGGCTGGG 57.571 55.556 9.86 0.00 36.34 4.45
2758 4719 1.874345 GCAGCAGCAGTTCATTGGCT 61.874 55.000 0.00 0.00 41.58 4.75
2759 4720 1.445582 GCAGCAGCAGTTCATTGGC 60.446 57.895 0.00 0.00 41.58 4.52
2760 4721 0.109272 CAGCAGCAGCAGTTCATTGG 60.109 55.000 3.17 0.00 45.49 3.16
2761 4722 0.596577 ACAGCAGCAGCAGTTCATTG 59.403 50.000 3.17 0.00 45.49 2.82
2762 4723 0.596577 CACAGCAGCAGCAGTTCATT 59.403 50.000 3.17 0.00 45.49 2.57
2763 4724 1.241990 CCACAGCAGCAGCAGTTCAT 61.242 55.000 3.17 0.00 45.49 2.57
2764 4725 1.895231 CCACAGCAGCAGCAGTTCA 60.895 57.895 3.17 0.00 45.49 3.18
2765 4726 2.952245 CCACAGCAGCAGCAGTTC 59.048 61.111 3.17 0.00 45.49 3.01
2766 4727 3.292936 GCCACAGCAGCAGCAGTT 61.293 61.111 3.17 0.00 45.49 3.16
2809 4770 3.996744 GACGGCGTCCTCGACTTCG 62.997 68.421 28.72 0.00 43.80 3.79
2810 4771 2.202453 GACGGCGTCCTCGACTTC 60.202 66.667 28.72 0.73 43.80 3.01
2811 4772 4.099170 CGACGGCGTCCTCGACTT 62.099 66.667 31.86 0.00 43.80 3.01
2816 4777 4.517703 CTCGTCGACGGCGTCCTC 62.518 72.222 35.05 22.92 40.29 3.71
2822 4783 2.262471 TTCTAAGCCTCGTCGACGGC 62.262 60.000 35.05 29.83 46.65 5.68
2823 4784 0.522915 GTTCTAAGCCTCGTCGACGG 60.523 60.000 35.05 24.95 40.29 4.79
2824 4785 0.856490 CGTTCTAAGCCTCGTCGACG 60.856 60.000 31.30 31.30 41.45 5.12
2825 4786 0.522915 CCGTTCTAAGCCTCGTCGAC 60.523 60.000 5.18 5.18 0.00 4.20
2826 4787 1.651240 CCCGTTCTAAGCCTCGTCGA 61.651 60.000 0.00 0.00 0.00 4.20
2827 4788 1.226603 CCCGTTCTAAGCCTCGTCG 60.227 63.158 0.00 0.00 0.00 5.12
2828 4789 0.100861 CTCCCGTTCTAAGCCTCGTC 59.899 60.000 0.00 0.00 0.00 4.20
2829 4790 1.321074 CCTCCCGTTCTAAGCCTCGT 61.321 60.000 0.00 0.00 0.00 4.18
2830 4791 1.437986 CCTCCCGTTCTAAGCCTCG 59.562 63.158 0.00 0.00 0.00 4.63
2831 4792 1.144276 GCCTCCCGTTCTAAGCCTC 59.856 63.158 0.00 0.00 0.00 4.70
2832 4793 2.722201 CGCCTCCCGTTCTAAGCCT 61.722 63.158 0.00 0.00 0.00 4.58
2833 4794 2.202892 CGCCTCCCGTTCTAAGCC 60.203 66.667 0.00 0.00 0.00 4.35
2834 4795 2.202892 CCGCCTCCCGTTCTAAGC 60.203 66.667 0.00 0.00 34.38 3.09
2835 4796 2.202892 GCCGCCTCCCGTTCTAAG 60.203 66.667 0.00 0.00 34.38 2.18
2836 4797 4.137872 CGCCGCCTCCCGTTCTAA 62.138 66.667 0.00 0.00 34.38 2.10
2924 4885 3.434319 GACCACATGCACAGGCCG 61.434 66.667 0.00 0.00 40.13 6.13
2925 4886 1.604593 AAGACCACATGCACAGGCC 60.605 57.895 0.00 0.00 40.13 5.19
2926 4887 1.582968 CAAGACCACATGCACAGGC 59.417 57.895 0.00 0.00 41.68 4.85
2927 4888 1.582968 GCAAGACCACATGCACAGG 59.417 57.895 0.00 0.00 39.97 4.00
2928 4889 1.582968 GGCAAGACCACATGCACAG 59.417 57.895 0.00 0.00 41.66 3.66
2929 4890 2.260154 CGGCAAGACCACATGCACA 61.260 57.895 0.00 0.00 41.66 4.57
2930 4891 2.562912 CGGCAAGACCACATGCAC 59.437 61.111 0.00 0.00 41.66 4.57
2931 4892 2.672651 CCGGCAAGACCACATGCA 60.673 61.111 0.00 0.00 41.66 3.96
2932 4893 2.672996 ACCGGCAAGACCACATGC 60.673 61.111 0.00 0.00 39.57 4.06
2933 4894 2.981560 GCACCGGCAAGACCACATG 61.982 63.158 0.00 0.00 40.72 3.21
2934 4895 2.672996 GCACCGGCAAGACCACAT 60.673 61.111 0.00 0.00 40.72 3.21
2946 4907 1.548973 GAGCGAATACCGATGCACCG 61.549 60.000 0.00 0.00 41.76 4.94
2947 4908 1.548973 CGAGCGAATACCGATGCACC 61.549 60.000 0.00 0.00 41.76 5.01
2948 4909 0.870307 ACGAGCGAATACCGATGCAC 60.870 55.000 0.00 0.00 41.76 4.57
2949 4910 0.664224 TACGAGCGAATACCGATGCA 59.336 50.000 0.00 0.00 41.76 3.96
2950 4911 1.050767 GTACGAGCGAATACCGATGC 58.949 55.000 0.00 0.00 41.76 3.91
2951 4912 1.315497 CGTACGAGCGAATACCGATG 58.685 55.000 10.44 0.00 41.76 3.84
2952 4913 0.385223 GCGTACGAGCGAATACCGAT 60.385 55.000 21.65 0.00 41.76 4.18
2953 4914 1.010797 GCGTACGAGCGAATACCGA 60.011 57.895 21.65 0.00 41.76 4.69
2954 4915 3.507729 GCGTACGAGCGAATACCG 58.492 61.111 21.65 0.00 42.21 4.02
2970 4931 0.814010 ACCCAAATATCAGCGACCGC 60.814 55.000 6.25 6.25 42.33 5.68
2971 4932 1.202533 AGACCCAAATATCAGCGACCG 60.203 52.381 0.00 0.00 0.00 4.79
2972 4933 2.622064 AGACCCAAATATCAGCGACC 57.378 50.000 0.00 0.00 0.00 4.79
2973 4934 3.555168 CCCTAGACCCAAATATCAGCGAC 60.555 52.174 0.00 0.00 0.00 5.19
2974 4935 2.632996 CCCTAGACCCAAATATCAGCGA 59.367 50.000 0.00 0.00 0.00 4.93
2975 4936 2.872038 GCCCTAGACCCAAATATCAGCG 60.872 54.545 0.00 0.00 0.00 5.18
2976 4937 2.784347 GCCCTAGACCCAAATATCAGC 58.216 52.381 0.00 0.00 0.00 4.26
2977 4938 2.289694 CCGCCCTAGACCCAAATATCAG 60.290 54.545 0.00 0.00 0.00 2.90
2978 4939 1.697432 CCGCCCTAGACCCAAATATCA 59.303 52.381 0.00 0.00 0.00 2.15
2979 4940 1.975680 TCCGCCCTAGACCCAAATATC 59.024 52.381 0.00 0.00 0.00 1.63
2980 4941 1.697982 GTCCGCCCTAGACCCAAATAT 59.302 52.381 0.00 0.00 0.00 1.28
2981 4942 1.125633 GTCCGCCCTAGACCCAAATA 58.874 55.000 0.00 0.00 0.00 1.40
2982 4943 0.912487 TGTCCGCCCTAGACCCAAAT 60.912 55.000 0.00 0.00 33.09 2.32
2983 4944 1.536907 TGTCCGCCCTAGACCCAAA 60.537 57.895 0.00 0.00 33.09 3.28
2984 4945 2.120940 TGTCCGCCCTAGACCCAA 59.879 61.111 0.00 0.00 33.09 4.12
2985 4946 2.682494 GTGTCCGCCCTAGACCCA 60.682 66.667 0.00 0.00 33.09 4.51
2986 4947 3.834799 CGTGTCCGCCCTAGACCC 61.835 72.222 0.00 0.00 33.09 4.46
2987 4948 2.753043 TCGTGTCCGCCCTAGACC 60.753 66.667 0.00 0.00 33.09 3.85
2988 4949 2.799371 CTCGTGTCCGCCCTAGAC 59.201 66.667 0.00 0.00 34.72 2.59
2989 4950 3.138798 GCTCGTGTCCGCCCTAGA 61.139 66.667 0.00 0.00 0.00 2.43
2990 4951 4.554363 CGCTCGTGTCCGCCCTAG 62.554 72.222 0.00 0.00 0.00 3.02
3006 4967 4.899239 GGATGCTCCTGTCGCCCG 62.899 72.222 0.00 0.00 32.53 6.13
3007 4968 4.899239 CGGATGCTCCTGTCGCCC 62.899 72.222 1.51 0.00 33.30 6.13
3018 4979 1.400242 GCGATGGATAAAAGCGGATGC 60.400 52.381 0.00 0.00 43.24 3.91
3019 4980 1.136252 CGCGATGGATAAAAGCGGATG 60.136 52.381 0.00 0.00 46.06 3.51
3020 4981 1.148310 CGCGATGGATAAAAGCGGAT 58.852 50.000 0.00 0.00 46.06 4.18
3021 4982 2.600388 CGCGATGGATAAAAGCGGA 58.400 52.632 0.00 0.00 46.06 5.54
3023 4984 2.600388 TCCGCGATGGATAAAAGCG 58.400 52.632 8.23 0.87 43.74 4.68
3032 4993 1.748879 ACAAATGGGTCCGCGATGG 60.749 57.895 8.23 0.00 40.09 3.51
3033 4994 1.024046 TCACAAATGGGTCCGCGATG 61.024 55.000 8.23 0.00 0.00 3.84
3034 4995 1.024579 GTCACAAATGGGTCCGCGAT 61.025 55.000 8.23 0.00 0.00 4.58
3035 4996 1.669760 GTCACAAATGGGTCCGCGA 60.670 57.895 8.23 0.00 0.00 5.87
3036 4997 1.635663 GAGTCACAAATGGGTCCGCG 61.636 60.000 0.00 0.00 0.00 6.46
3037 4998 0.605319 TGAGTCACAAATGGGTCCGC 60.605 55.000 0.00 0.00 0.00 5.54
3038 4999 1.890876 TTGAGTCACAAATGGGTCCG 58.109 50.000 0.00 0.00 35.39 4.79
3046 5007 5.163322 ATTGAGCCCAAATTTGAGTCACAAA 60.163 36.000 19.86 5.63 41.80 2.83
3047 5008 3.295093 TGAGCCCAAATTTGAGTCACAA 58.705 40.909 19.86 0.00 36.65 3.33
3048 5009 2.942804 TGAGCCCAAATTTGAGTCACA 58.057 42.857 19.86 9.39 0.00 3.58
3049 5010 4.525912 ATTGAGCCCAAATTTGAGTCAC 57.474 40.909 19.86 7.15 35.67 3.67
3050 5011 5.299148 CAAATTGAGCCCAAATTTGAGTCA 58.701 37.500 19.86 14.63 35.38 3.41
3051 5012 4.692155 CCAAATTGAGCCCAAATTTGAGTC 59.308 41.667 19.86 12.40 35.38 3.36
3052 5013 4.347583 TCCAAATTGAGCCCAAATTTGAGT 59.652 37.500 19.86 3.27 35.38 3.41
3053 5014 4.897140 TCCAAATTGAGCCCAAATTTGAG 58.103 39.130 19.86 7.62 35.38 3.02
3054 5015 4.970860 TCCAAATTGAGCCCAAATTTGA 57.029 36.364 19.86 4.97 35.38 2.69
3055 5016 5.247084 TGATCCAAATTGAGCCCAAATTTG 58.753 37.500 11.40 11.40 35.67 2.32
3056 5017 5.502089 TGATCCAAATTGAGCCCAAATTT 57.498 34.783 0.00 0.00 35.67 1.82
3057 5018 5.493809 CTTGATCCAAATTGAGCCCAAATT 58.506 37.500 0.00 0.00 35.67 1.82
3058 5019 5.093849 CTTGATCCAAATTGAGCCCAAAT 57.906 39.130 0.00 0.00 35.67 2.32
3059 5020 4.540359 CTTGATCCAAATTGAGCCCAAA 57.460 40.909 0.00 0.00 35.67 3.28


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.