Multiple sequence alignment - TraesCS3D01G256900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G256900 chr3D 100.000 3250 0 0 1 3250 359091168 359094417 0.000000e+00 6002
1 TraesCS3D01G256900 chr3D 92.739 303 18 3 2306 2606 285911912 285912212 4.980000e-118 435
2 TraesCS3D01G256900 chr3D 91.667 168 13 1 2881 3047 523761357 523761524 7.010000e-57 231
3 TraesCS3D01G256900 chr3B 93.641 2343 90 17 1 2315 465067544 465069855 0.000000e+00 3446
4 TraesCS3D01G256900 chr3B 92.857 308 19 3 2599 2906 465069852 465070156 8.270000e-121 444
5 TraesCS3D01G256900 chr3B 87.500 232 27 2 3017 3248 92188315 92188544 1.920000e-67 267
6 TraesCS3D01G256900 chr3A 91.220 2369 99 27 1 2315 478664520 478666833 0.000000e+00 3121
7 TraesCS3D01G256900 chr3A 84.155 284 22 4 2599 2881 478666830 478667091 1.500000e-63 254
8 TraesCS3D01G256900 chr5B 85.022 1342 151 25 987 2308 561693675 561692364 0.000000e+00 1319
9 TraesCS3D01G256900 chr5B 85.656 1227 128 27 1053 2261 561713665 561712469 0.000000e+00 1247
10 TraesCS3D01G256900 chr5B 76.518 247 46 11 1787 2027 353015784 353016024 1.220000e-24 124
11 TraesCS3D01G256900 chr5D 90.053 563 41 11 1762 2313 458458902 458458344 0.000000e+00 715
12 TraesCS3D01G256900 chr5D 94.218 294 16 1 2312 2605 399710922 399710630 6.400000e-122 448
13 TraesCS3D01G256900 chr5D 94.483 290 16 0 2312 2601 508089799 508089510 6.400000e-122 448
14 TraesCS3D01G256900 chr5D 82.022 178 23 7 2141 2313 458457463 458457290 3.380000e-30 143
15 TraesCS3D01G256900 chr5D 76.423 246 48 10 1787 2027 308220215 308220455 1.220000e-24 124
16 TraesCS3D01G256900 chr2B 78.606 818 141 25 1441 2240 53520464 53519663 8.040000e-141 510
17 TraesCS3D01G256900 chr2B 93.793 290 17 1 2312 2601 727675596 727675308 4.980000e-118 435
18 TraesCS3D01G256900 chr2B 93.789 161 9 1 2881 3040 500715864 500716024 1.170000e-59 241
19 TraesCS3D01G256900 chr2D 94.406 286 16 0 2314 2599 469115263 469114978 1.070000e-119 440
20 TraesCS3D01G256900 chr2D 93.836 292 17 1 2310 2601 422564674 422564964 3.850000e-119 438
21 TraesCS3D01G256900 chr2D 93.814 291 16 1 2312 2602 164992547 164992259 1.380000e-118 436
22 TraesCS3D01G256900 chr2D 93.515 293 18 1 2312 2604 581409477 581409768 4.980000e-118 435
23 TraesCS3D01G256900 chr2D 79.508 488 93 6 1762 2247 32595054 32594572 1.120000e-89 340
24 TraesCS3D01G256900 chr2D 92.857 168 11 1 2881 3047 637319384 637319217 3.240000e-60 243
25 TraesCS3D01G256900 chr6A 93.220 295 18 2 2310 2604 140019404 140019112 1.790000e-117 433
26 TraesCS3D01G256900 chr6A 87.069 232 28 2 3017 3248 289147277 289147506 8.940000e-66 261
27 TraesCS3D01G256900 chr5A 84.737 380 42 9 980 1354 576340536 576340168 1.840000e-97 366
28 TraesCS3D01G256900 chr5A 87.500 232 27 2 3017 3248 300057583 300057812 1.920000e-67 267
29 TraesCS3D01G256900 chr5A 93.168 161 10 1 2881 3040 73033338 73033498 5.420000e-58 235
30 TraesCS3D01G256900 chr5A 76.613 248 44 14 1787 2027 389724965 389724725 1.220000e-24 124
31 TraesCS3D01G256900 chr7B 87.500 232 27 2 3017 3248 743104296 743104067 1.920000e-67 267
32 TraesCS3D01G256900 chr7B 87.500 232 23 5 3017 3246 743074908 743075135 2.490000e-66 263
33 TraesCS3D01G256900 chr7A 87.500 232 27 2 3017 3248 671951949 671951720 1.920000e-67 267
34 TraesCS3D01G256900 chr7A 93.789 161 9 1 2881 3040 60105255 60105095 1.170000e-59 241
35 TraesCS3D01G256900 chr6B 87.069 232 28 2 3017 3248 394498550 394498779 8.940000e-66 261
36 TraesCS3D01G256900 chr6B 87.179 234 24 5 3017 3248 525686808 525687037 8.940000e-66 261
37 TraesCS3D01G256900 chr2A 86.638 232 29 2 3017 3248 735181383 735181612 4.160000e-64 255
38 TraesCS3D01G256900 chr7D 92.857 168 11 1 2881 3047 487835739 487835572 3.240000e-60 243
39 TraesCS3D01G256900 chr7D 92.857 168 11 1 2881 3047 579028109 579028276 3.240000e-60 243
40 TraesCS3D01G256900 chr1D 92.857 168 11 1 2881 3047 212469470 212469303 3.240000e-60 243
41 TraesCS3D01G256900 chr6D 92.262 168 12 1 2881 3047 108466094 108466261 1.510000e-58 237


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G256900 chr3D 359091168 359094417 3249 False 6002.0 6002 100.0000 1 3250 1 chr3D.!!$F2 3249
1 TraesCS3D01G256900 chr3B 465067544 465070156 2612 False 1945.0 3446 93.2490 1 2906 2 chr3B.!!$F2 2905
2 TraesCS3D01G256900 chr3A 478664520 478667091 2571 False 1687.5 3121 87.6875 1 2881 2 chr3A.!!$F1 2880
3 TraesCS3D01G256900 chr5B 561692364 561693675 1311 True 1319.0 1319 85.0220 987 2308 1 chr5B.!!$R1 1321
4 TraesCS3D01G256900 chr5B 561712469 561713665 1196 True 1247.0 1247 85.6560 1053 2261 1 chr5B.!!$R2 1208
5 TraesCS3D01G256900 chr5D 458457290 458458902 1612 True 429.0 715 86.0375 1762 2313 2 chr5D.!!$R3 551
6 TraesCS3D01G256900 chr2B 53519663 53520464 801 True 510.0 510 78.6060 1441 2240 1 chr2B.!!$R1 799

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
963 1001 0.179081 GGAGGATTGCTACCGTGTCC 60.179 60.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2910 4085 0.171007 CCACGCCTACAAAATGCCAG 59.829 55.0 0.0 0.0 0.0 4.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.384789 AGAAACAAAGGGTCAAAGAAGGC 59.615 43.478 0.00 0.00 0.00 4.35
39 40 0.853530 AAGAAGGCTTTGGACACCCT 59.146 50.000 0.00 0.00 0.00 4.34
40 41 1.742308 AGAAGGCTTTGGACACCCTA 58.258 50.000 0.00 0.00 0.00 3.53
45 47 1.073284 GGCTTTGGACACCCTACTGAA 59.927 52.381 0.00 0.00 0.00 3.02
77 85 4.801521 TCAATGGATGATGACTTCCCAT 57.198 40.909 0.00 0.00 38.91 4.00
78 86 4.466827 TCAATGGATGATGACTTCCCATG 58.533 43.478 0.00 0.00 38.91 3.66
86 94 4.096681 TGATGACTTCCCATGTACTGTCT 58.903 43.478 0.00 0.00 0.00 3.41
100 108 8.960591 CCATGTACTGTCTGAATAAAAATTCCT 58.039 33.333 0.00 0.00 0.00 3.36
101 109 9.994432 CATGTACTGTCTGAATAAAAATTCCTC 57.006 33.333 0.00 0.00 0.00 3.71
206 217 2.816777 TGGCACAGGGTATATGCAAA 57.183 45.000 0.00 0.00 41.27 3.68
499 514 1.377463 CGGGAGACTGACCTCGTCT 60.377 63.158 0.00 0.00 43.97 4.18
755 770 0.908180 CCCGGACCCCAGACTACTTT 60.908 60.000 0.73 0.00 0.00 2.66
918 956 4.268405 ACGTCACGGTTTTACTTACAGTTG 59.732 41.667 0.35 0.00 0.00 3.16
923 961 5.523188 CACGGTTTTACTTACAGTTGGTGTA 59.477 40.000 0.00 0.00 40.94 2.90
941 979 6.624423 TGGTGTAGGATTTTACGTAGAGTTC 58.376 40.000 0.00 0.00 0.00 3.01
945 983 4.741342 AGGATTTTACGTAGAGTTCGTGG 58.259 43.478 0.00 0.00 41.62 4.94
952 990 2.163815 ACGTAGAGTTCGTGGAGGATTG 59.836 50.000 0.00 0.00 40.07 2.67
963 1001 0.179081 GGAGGATTGCTACCGTGTCC 60.179 60.000 0.00 0.00 0.00 4.02
967 1012 1.209128 GATTGCTACCGTGTCCGATG 58.791 55.000 0.00 0.00 35.63 3.84
1008 1053 2.091885 TCCCATAAAAGGCATGGAGGTC 60.092 50.000 3.28 0.00 44.95 3.85
1076 1121 3.195698 GACGATGGGGCGCAACTC 61.196 66.667 10.83 1.29 33.86 3.01
1320 1368 0.249398 ATGCCAACTACAGGTCGGTC 59.751 55.000 0.00 0.00 0.00 4.79
1321 1369 1.445582 GCCAACTACAGGTCGGTCG 60.446 63.158 0.00 0.00 0.00 4.79
1322 1370 1.214589 CCAACTACAGGTCGGTCGG 59.785 63.158 0.00 0.00 0.00 4.79
1323 1371 1.530013 CCAACTACAGGTCGGTCGGT 61.530 60.000 0.00 0.00 0.00 4.69
1324 1372 0.388134 CAACTACAGGTCGGTCGGTG 60.388 60.000 0.00 0.00 0.00 4.94
1325 1373 0.825010 AACTACAGGTCGGTCGGTGT 60.825 55.000 0.00 0.00 0.00 4.16
1326 1374 0.036732 ACTACAGGTCGGTCGGTGTA 59.963 55.000 0.00 0.00 0.00 2.90
1327 1375 1.167851 CTACAGGTCGGTCGGTGTAA 58.832 55.000 0.00 0.00 0.00 2.41
1349 1397 8.963130 TGTAATTAAAAGCTCAAAATCGTGTTG 58.037 29.630 0.00 0.00 0.00 3.33
1356 1404 3.725740 GCTCAAAATCGTGTTGTCAAGTG 59.274 43.478 0.00 0.00 0.00 3.16
1358 1406 3.066064 TCAAAATCGTGTTGTCAAGTGGG 59.934 43.478 0.00 0.00 0.00 4.61
1669 1731 0.038251 CTACTTCACCGACAGCAGCA 60.038 55.000 0.00 0.00 0.00 4.41
1716 1786 1.021968 GCCCGATCACGCCTTAATTT 58.978 50.000 0.00 0.00 38.29 1.82
1721 1791 5.735070 GCCCGATCACGCCTTAATTTTATTT 60.735 40.000 0.00 0.00 38.29 1.40
1722 1792 6.270064 CCCGATCACGCCTTAATTTTATTTT 58.730 36.000 0.00 0.00 38.29 1.82
1723 1793 7.419204 CCCGATCACGCCTTAATTTTATTTTA 58.581 34.615 0.00 0.00 38.29 1.52
1851 1952 3.898627 AAGCTCGTCACGGTGCTCG 62.899 63.158 16.60 15.44 45.88 5.03
1881 1982 4.403137 CGTACCCGAACGGCGTCA 62.403 66.667 15.17 0.00 39.19 4.35
2145 2249 3.063084 GCGTGGAGGTCGAGGAGT 61.063 66.667 0.00 0.00 0.00 3.85
2202 3363 1.963338 GAGCAGAGCGGCAACAAGT 60.963 57.895 1.45 0.00 35.83 3.16
2208 3369 1.724582 GAGCGGCAACAAGTTGTGGT 61.725 55.000 9.79 11.87 42.31 4.16
2261 3423 6.073548 GCCTCTTAGTTTGATCGATTATGTGG 60.074 42.308 0.00 2.11 0.00 4.17
2293 3467 8.841305 CCTTTATGGATTAGTACGGGTTCGTTG 61.841 44.444 0.00 0.00 42.32 4.10
2315 3489 4.346709 TGGTGGTTGTCTCATTGAGTTAGA 59.653 41.667 13.23 0.00 0.00 2.10
2316 3490 4.691216 GGTGGTTGTCTCATTGAGTTAGAC 59.309 45.833 13.23 5.36 40.05 2.59
2317 3491 5.511545 GGTGGTTGTCTCATTGAGTTAGACT 60.512 44.000 13.23 0.00 40.25 3.24
2318 3492 6.295123 GGTGGTTGTCTCATTGAGTTAGACTA 60.295 42.308 13.23 4.45 40.25 2.59
2319 3493 6.809196 GTGGTTGTCTCATTGAGTTAGACTAG 59.191 42.308 13.23 0.00 40.25 2.57
2320 3494 5.808030 GGTTGTCTCATTGAGTTAGACTAGC 59.192 44.000 13.23 7.41 40.25 3.42
2321 3495 5.584253 TGTCTCATTGAGTTAGACTAGCC 57.416 43.478 13.23 0.00 40.25 3.93
2322 3496 5.016831 TGTCTCATTGAGTTAGACTAGCCA 58.983 41.667 13.23 0.00 40.25 4.75
2323 3497 5.105716 TGTCTCATTGAGTTAGACTAGCCAC 60.106 44.000 13.23 0.96 40.25 5.01
2324 3498 5.016831 TCTCATTGAGTTAGACTAGCCACA 58.983 41.667 13.23 0.00 0.00 4.17
2325 3499 5.480422 TCTCATTGAGTTAGACTAGCCACAA 59.520 40.000 13.23 8.24 0.00 3.33
2326 3500 6.155221 TCTCATTGAGTTAGACTAGCCACAAT 59.845 38.462 13.23 10.96 0.00 2.71
2327 3501 6.108687 TCATTGAGTTAGACTAGCCACAATG 58.891 40.000 24.10 24.10 42.22 2.82
2328 3502 4.471904 TGAGTTAGACTAGCCACAATGG 57.528 45.455 0.00 0.00 41.55 3.16
2329 3503 3.197766 TGAGTTAGACTAGCCACAATGGG 59.802 47.826 0.00 0.00 38.19 4.00
2342 3516 6.518208 GCCACAATGGGTAGTAACATAAAA 57.482 37.500 0.00 0.00 38.19 1.52
2343 3517 7.107639 GCCACAATGGGTAGTAACATAAAAT 57.892 36.000 0.00 0.00 38.19 1.82
2344 3518 8.228035 GCCACAATGGGTAGTAACATAAAATA 57.772 34.615 0.00 0.00 38.19 1.40
2345 3519 8.349983 GCCACAATGGGTAGTAACATAAAATAG 58.650 37.037 0.00 0.00 38.19 1.73
2346 3520 9.403583 CCACAATGGGTAGTAACATAAAATAGT 57.596 33.333 0.00 0.00 32.67 2.12
2357 3531 9.469097 AGTAACATAAAATAGTAACATTGCCCA 57.531 29.630 0.00 0.00 0.00 5.36
2393 3567 9.901651 TTTATGTTACTACCTCTATAATGGGGA 57.098 33.333 0.00 0.00 0.00 4.81
2394 3568 9.543231 TTATGTTACTACCTCTATAATGGGGAG 57.457 37.037 0.00 0.00 37.12 4.30
2395 3569 6.930475 TGTTACTACCTCTATAATGGGGAGT 58.070 40.000 0.00 0.00 45.34 3.85
2396 3570 8.060727 TGTTACTACCTCTATAATGGGGAGTA 57.939 38.462 0.00 0.00 42.00 2.59
2398 3572 8.946797 TTACTACCTCTATAATGGGGAGTAAC 57.053 38.462 10.83 0.00 45.93 2.50
2399 3573 6.930475 ACTACCTCTATAATGGGGAGTAACA 58.070 40.000 0.00 0.00 42.00 2.41
2400 3574 7.545546 ACTACCTCTATAATGGGGAGTAACAT 58.454 38.462 0.00 0.00 42.00 2.71
2401 3575 8.685311 ACTACCTCTATAATGGGGAGTAACATA 58.315 37.037 0.00 0.00 42.00 2.29
2402 3576 9.716556 CTACCTCTATAATGGGGAGTAACATAT 57.283 37.037 0.00 0.00 0.00 1.78
2403 3577 8.380742 ACCTCTATAATGGGGAGTAACATATG 57.619 38.462 0.00 0.00 0.00 1.78
2404 3578 7.962003 ACCTCTATAATGGGGAGTAACATATGT 59.038 37.037 1.41 1.41 0.00 2.29
2405 3579 8.260818 CCTCTATAATGGGGAGTAACATATGTG 58.739 40.741 9.63 0.00 0.00 3.21
2406 3580 8.736097 TCTATAATGGGGAGTAACATATGTGT 57.264 34.615 9.63 2.63 41.28 3.72
2407 3581 8.593679 TCTATAATGGGGAGTAACATATGTGTG 58.406 37.037 9.63 0.00 38.92 3.82
2408 3582 3.924114 TGGGGAGTAACATATGTGTGG 57.076 47.619 9.63 0.00 38.92 4.17
2409 3583 3.186283 TGGGGAGTAACATATGTGTGGT 58.814 45.455 9.63 0.00 38.92 4.16
2410 3584 4.363573 TGGGGAGTAACATATGTGTGGTA 58.636 43.478 9.63 0.00 38.92 3.25
2411 3585 4.783763 TGGGGAGTAACATATGTGTGGTAA 59.216 41.667 9.63 0.00 38.92 2.85
2412 3586 5.121105 GGGGAGTAACATATGTGTGGTAAC 58.879 45.833 9.63 1.91 38.92 2.50
2463 3637 6.835174 AGACTCATATTGCCTTGATATGTGT 58.165 36.000 10.02 10.02 42.36 3.72
2464 3638 6.709397 AGACTCATATTGCCTTGATATGTGTG 59.291 38.462 13.37 5.43 40.99 3.82
2465 3639 6.594744 ACTCATATTGCCTTGATATGTGTGA 58.405 36.000 9.63 0.00 40.17 3.58
2466 3640 7.229308 ACTCATATTGCCTTGATATGTGTGAT 58.771 34.615 9.63 0.00 40.17 3.06
2467 3641 7.174426 ACTCATATTGCCTTGATATGTGTGATG 59.826 37.037 9.63 0.00 40.17 3.07
2468 3642 6.999871 TCATATTGCCTTGATATGTGTGATGT 59.000 34.615 0.00 0.00 38.21 3.06
2469 3643 7.503230 TCATATTGCCTTGATATGTGTGATGTT 59.497 33.333 0.00 0.00 38.21 2.71
2470 3644 8.785946 CATATTGCCTTGATATGTGTGATGTTA 58.214 33.333 0.00 0.00 34.35 2.41
2471 3645 6.435430 TTGCCTTGATATGTGTGATGTTAC 57.565 37.500 0.00 0.00 0.00 2.50
2472 3646 5.744171 TGCCTTGATATGTGTGATGTTACT 58.256 37.500 0.00 0.00 0.00 2.24
2473 3647 5.817296 TGCCTTGATATGTGTGATGTTACTC 59.183 40.000 0.00 0.00 0.00 2.59
2474 3648 5.817296 GCCTTGATATGTGTGATGTTACTCA 59.183 40.000 0.00 0.00 0.00 3.41
2475 3649 6.484643 GCCTTGATATGTGTGATGTTACTCAT 59.515 38.462 0.00 0.00 38.11 2.90
2476 3650 7.657354 GCCTTGATATGTGTGATGTTACTCATA 59.343 37.037 0.00 0.00 39.73 2.15
2477 3651 8.982685 CCTTGATATGTGTGATGTTACTCATAC 58.017 37.037 0.00 5.35 38.84 2.39
2478 3652 9.755804 CTTGATATGTGTGATGTTACTCATACT 57.244 33.333 10.75 3.32 38.84 2.12
2484 3658 8.803397 TGTGTGATGTTACTCATACTAGTAGT 57.197 34.615 8.85 8.14 37.92 2.73
2485 3659 9.895138 TGTGTGATGTTACTCATACTAGTAGTA 57.105 33.333 12.38 12.38 37.92 1.82
2503 3677 9.334947 CTAGTAGTAACTAGCTATGTTACCACA 57.665 37.037 26.31 18.52 46.53 4.17
2504 3678 8.763984 AGTAGTAACTAGCTATGTTACCACAT 57.236 34.615 26.31 18.10 46.31 3.21
2505 3679 8.630917 AGTAGTAACTAGCTATGTTACCACATG 58.369 37.037 26.31 0.00 46.31 3.21
2506 3680 7.419711 AGTAACTAGCTATGTTACCACATGT 57.580 36.000 25.92 14.18 46.31 3.21
2507 3681 7.490000 AGTAACTAGCTATGTTACCACATGTC 58.510 38.462 25.92 11.54 46.31 3.06
2508 3682 6.546428 AACTAGCTATGTTACCACATGTCT 57.454 37.500 0.00 0.00 43.92 3.41
2509 3683 6.150396 ACTAGCTATGTTACCACATGTCTC 57.850 41.667 0.00 0.00 43.92 3.36
2510 3684 5.894393 ACTAGCTATGTTACCACATGTCTCT 59.106 40.000 0.00 0.00 43.92 3.10
2511 3685 5.269505 AGCTATGTTACCACATGTCTCTC 57.730 43.478 0.00 0.00 43.92 3.20
2512 3686 4.959210 AGCTATGTTACCACATGTCTCTCT 59.041 41.667 0.00 0.00 43.92 3.10
2513 3687 5.423610 AGCTATGTTACCACATGTCTCTCTT 59.576 40.000 0.00 0.00 43.92 2.85
2514 3688 6.070538 AGCTATGTTACCACATGTCTCTCTTT 60.071 38.462 0.00 0.00 43.92 2.52
2515 3689 6.256757 GCTATGTTACCACATGTCTCTCTTTC 59.743 42.308 0.00 0.00 43.92 2.62
2516 3690 5.808366 TGTTACCACATGTCTCTCTTTCT 57.192 39.130 0.00 0.00 0.00 2.52
2517 3691 6.174720 TGTTACCACATGTCTCTCTTTCTT 57.825 37.500 0.00 0.00 0.00 2.52
2518 3692 6.223852 TGTTACCACATGTCTCTCTTTCTTC 58.776 40.000 0.00 0.00 0.00 2.87
2519 3693 4.963318 ACCACATGTCTCTCTTTCTTCA 57.037 40.909 0.00 0.00 0.00 3.02
2520 3694 5.495926 ACCACATGTCTCTCTTTCTTCAT 57.504 39.130 0.00 0.00 0.00 2.57
2521 3695 5.874093 ACCACATGTCTCTCTTTCTTCATT 58.126 37.500 0.00 0.00 0.00 2.57
2522 3696 6.302269 ACCACATGTCTCTCTTTCTTCATTT 58.698 36.000 0.00 0.00 0.00 2.32
2523 3697 7.453393 ACCACATGTCTCTCTTTCTTCATTTA 58.547 34.615 0.00 0.00 0.00 1.40
2524 3698 8.105829 ACCACATGTCTCTCTTTCTTCATTTAT 58.894 33.333 0.00 0.00 0.00 1.40
2525 3699 8.954350 CCACATGTCTCTCTTTCTTCATTTATT 58.046 33.333 0.00 0.00 0.00 1.40
2526 3700 9.770503 CACATGTCTCTCTTTCTTCATTTATTG 57.229 33.333 0.00 0.00 0.00 1.90
2527 3701 8.457261 ACATGTCTCTCTTTCTTCATTTATTGC 58.543 33.333 0.00 0.00 0.00 3.56
2528 3702 8.675504 CATGTCTCTCTTTCTTCATTTATTGCT 58.324 33.333 0.00 0.00 0.00 3.91
2529 3703 8.627208 TGTCTCTCTTTCTTCATTTATTGCTT 57.373 30.769 0.00 0.00 0.00 3.91
2530 3704 8.509690 TGTCTCTCTTTCTTCATTTATTGCTTG 58.490 33.333 0.00 0.00 0.00 4.01
2531 3705 7.484324 GTCTCTCTTTCTTCATTTATTGCTTGC 59.516 37.037 0.00 0.00 0.00 4.01
2532 3706 6.624423 TCTCTTTCTTCATTTATTGCTTGCC 58.376 36.000 0.00 0.00 0.00 4.52
2533 3707 6.209192 TCTCTTTCTTCATTTATTGCTTGCCA 59.791 34.615 0.00 0.00 0.00 4.92
2534 3708 6.158598 TCTTTCTTCATTTATTGCTTGCCAC 58.841 36.000 0.00 0.00 0.00 5.01
2535 3709 5.465532 TTCTTCATTTATTGCTTGCCACA 57.534 34.783 0.00 0.00 0.00 4.17
2536 3710 5.664294 TCTTCATTTATTGCTTGCCACAT 57.336 34.783 0.00 0.00 0.00 3.21
2537 3711 5.653507 TCTTCATTTATTGCTTGCCACATC 58.346 37.500 0.00 0.00 0.00 3.06
2538 3712 5.185442 TCTTCATTTATTGCTTGCCACATCA 59.815 36.000 0.00 0.00 0.00 3.07
2539 3713 5.601583 TCATTTATTGCTTGCCACATCAT 57.398 34.783 0.00 0.00 0.00 2.45
2540 3714 5.593968 TCATTTATTGCTTGCCACATCATC 58.406 37.500 0.00 0.00 0.00 2.92
2541 3715 5.361571 TCATTTATTGCTTGCCACATCATCT 59.638 36.000 0.00 0.00 0.00 2.90
2542 3716 6.546772 TCATTTATTGCTTGCCACATCATCTA 59.453 34.615 0.00 0.00 0.00 1.98
2543 3717 6.964807 TTTATTGCTTGCCACATCATCTAT 57.035 33.333 0.00 0.00 0.00 1.98
2544 3718 6.964807 TTATTGCTTGCCACATCATCTATT 57.035 33.333 0.00 0.00 0.00 1.73
2545 3719 5.864418 ATTGCTTGCCACATCATCTATTT 57.136 34.783 0.00 0.00 0.00 1.40
2546 3720 5.664294 TTGCTTGCCACATCATCTATTTT 57.336 34.783 0.00 0.00 0.00 1.82
2547 3721 6.772360 TTGCTTGCCACATCATCTATTTTA 57.228 33.333 0.00 0.00 0.00 1.52
2548 3722 6.964807 TGCTTGCCACATCATCTATTTTAT 57.035 33.333 0.00 0.00 0.00 1.40
2549 3723 6.973843 TGCTTGCCACATCATCTATTTTATC 58.026 36.000 0.00 0.00 0.00 1.75
2550 3724 6.774170 TGCTTGCCACATCATCTATTTTATCT 59.226 34.615 0.00 0.00 0.00 1.98
2551 3725 7.938490 TGCTTGCCACATCATCTATTTTATCTA 59.062 33.333 0.00 0.00 0.00 1.98
2552 3726 8.449397 GCTTGCCACATCATCTATTTTATCTAG 58.551 37.037 0.00 0.00 0.00 2.43
2553 3727 9.716531 CTTGCCACATCATCTATTTTATCTAGA 57.283 33.333 0.00 0.00 0.00 2.43
2582 3756 9.811995 TGTGTGATGTTATTACCTATGTTACTC 57.188 33.333 0.00 0.00 0.00 2.59
2583 3757 9.257651 GTGTGATGTTATTACCTATGTTACTCC 57.742 37.037 0.00 0.00 0.00 3.85
2584 3758 8.426489 TGTGATGTTATTACCTATGTTACTCCC 58.574 37.037 0.00 0.00 0.00 4.30
2585 3759 8.426489 GTGATGTTATTACCTATGTTACTCCCA 58.574 37.037 0.00 0.00 0.00 4.37
2586 3760 8.426489 TGATGTTATTACCTATGTTACTCCCAC 58.574 37.037 0.00 0.00 0.00 4.61
2587 3761 7.983166 TGTTATTACCTATGTTACTCCCACT 57.017 36.000 0.00 0.00 0.00 4.00
2588 3762 7.788026 TGTTATTACCTATGTTACTCCCACTG 58.212 38.462 0.00 0.00 0.00 3.66
2589 3763 7.400915 TGTTATTACCTATGTTACTCCCACTGT 59.599 37.037 0.00 0.00 0.00 3.55
2590 3764 8.917088 GTTATTACCTATGTTACTCCCACTGTA 58.083 37.037 0.00 0.00 0.00 2.74
2591 3765 7.598759 ATTACCTATGTTACTCCCACTGTAG 57.401 40.000 0.00 0.00 0.00 2.74
2592 3766 4.287552 ACCTATGTTACTCCCACTGTAGG 58.712 47.826 0.00 0.00 33.21 3.18
2593 3767 4.264713 ACCTATGTTACTCCCACTGTAGGT 60.265 45.833 0.00 0.00 34.40 3.08
2594 3768 5.043881 ACCTATGTTACTCCCACTGTAGGTA 60.044 44.000 0.00 0.00 35.99 3.08
2595 3769 5.535406 CCTATGTTACTCCCACTGTAGGTAG 59.465 48.000 0.00 0.00 0.00 3.18
2596 3770 4.393239 TGTTACTCCCACTGTAGGTAGT 57.607 45.455 0.00 0.00 0.00 2.73
2597 3771 4.338879 TGTTACTCCCACTGTAGGTAGTC 58.661 47.826 0.00 0.00 0.00 2.59
2598 3772 4.043812 TGTTACTCCCACTGTAGGTAGTCT 59.956 45.833 0.00 0.00 0.00 3.24
2599 3773 3.829728 ACTCCCACTGTAGGTAGTCTT 57.170 47.619 0.00 0.00 0.00 3.01
2600 3774 4.942363 ACTCCCACTGTAGGTAGTCTTA 57.058 45.455 0.00 0.00 0.00 2.10
2601 3775 4.598022 ACTCCCACTGTAGGTAGTCTTAC 58.402 47.826 0.00 0.00 0.00 2.34
2602 3776 4.291777 ACTCCCACTGTAGGTAGTCTTACT 59.708 45.833 0.00 0.00 0.00 2.24
2603 3777 5.490357 ACTCCCACTGTAGGTAGTCTTACTA 59.510 44.000 0.00 0.00 0.00 1.82
2604 3778 6.012157 ACTCCCACTGTAGGTAGTCTTACTAA 60.012 42.308 0.00 0.00 31.62 2.24
2634 3808 0.179045 AGGTCATGGCTTCGTATGGC 60.179 55.000 0.00 0.00 0.00 4.40
2729 3903 8.225777 CCATTTGCTTTGCTTAAGATCTTTTTC 58.774 33.333 14.36 3.63 35.80 2.29
2730 3904 8.985805 CATTTGCTTTGCTTAAGATCTTTTTCT 58.014 29.630 14.36 0.00 35.80 2.52
2731 3905 7.935338 TTGCTTTGCTTAAGATCTTTTTCTG 57.065 32.000 14.36 1.38 35.80 3.02
2735 3909 8.271487 GCTTTGCTTAAGATCTTTTTCTGTTTG 58.729 33.333 14.36 0.00 35.80 2.93
2754 3928 7.765360 TCTGTTTGCATGTTTTTCTTTCTGAAT 59.235 29.630 0.00 0.00 34.24 2.57
2848 4022 9.525826 AAAAGTCATCCAGAATTCTTTCTACAT 57.474 29.630 4.86 0.00 40.28 2.29
2888 4063 7.490962 AAAAGTTGTTCGATACTCATGTTGA 57.509 32.000 0.00 0.00 0.00 3.18
2897 4072 5.348724 TCGATACTCATGTTGACTTTGAAGC 59.651 40.000 0.00 0.00 0.00 3.86
2902 4077 4.388485 TCATGTTGACTTTGAAGCAGCTA 58.612 39.130 0.00 0.00 0.00 3.32
2906 4081 4.023792 TGTTGACTTTGAAGCAGCTACATG 60.024 41.667 0.00 0.00 0.00 3.21
2907 4082 3.076621 TGACTTTGAAGCAGCTACATGG 58.923 45.455 0.00 0.00 0.00 3.66
2908 4083 3.077359 GACTTTGAAGCAGCTACATGGT 58.923 45.455 0.00 0.00 0.00 3.55
2909 4084 4.253685 GACTTTGAAGCAGCTACATGGTA 58.746 43.478 0.00 0.00 0.00 3.25
2910 4085 4.003648 ACTTTGAAGCAGCTACATGGTAC 58.996 43.478 0.00 0.00 0.00 3.34
2911 4086 3.981071 TTGAAGCAGCTACATGGTACT 57.019 42.857 0.00 0.00 0.00 2.73
2912 4087 3.251479 TGAAGCAGCTACATGGTACTG 57.749 47.619 0.00 2.10 0.00 2.74
2913 4088 2.093500 TGAAGCAGCTACATGGTACTGG 60.093 50.000 0.00 0.00 0.00 4.00
2914 4089 0.179000 AGCAGCTACATGGTACTGGC 59.821 55.000 0.00 2.27 0.00 4.85
2915 4090 0.107703 GCAGCTACATGGTACTGGCA 60.108 55.000 11.56 0.00 0.00 4.92
2916 4091 1.475751 GCAGCTACATGGTACTGGCAT 60.476 52.381 11.56 0.00 0.00 4.40
2917 4092 2.923121 CAGCTACATGGTACTGGCATT 58.077 47.619 0.00 0.00 0.00 3.56
2918 4093 3.282021 CAGCTACATGGTACTGGCATTT 58.718 45.455 0.00 0.00 0.00 2.32
2919 4094 3.696051 CAGCTACATGGTACTGGCATTTT 59.304 43.478 0.00 0.00 0.00 1.82
2920 4095 3.696051 AGCTACATGGTACTGGCATTTTG 59.304 43.478 0.00 0.00 0.00 2.44
2921 4096 3.443681 GCTACATGGTACTGGCATTTTGT 59.556 43.478 0.00 0.00 0.00 2.83
2922 4097 4.638421 GCTACATGGTACTGGCATTTTGTA 59.362 41.667 0.00 0.00 0.00 2.41
2923 4098 5.220854 GCTACATGGTACTGGCATTTTGTAG 60.221 44.000 0.00 12.13 38.71 2.74
2924 4099 4.016444 ACATGGTACTGGCATTTTGTAGG 58.984 43.478 0.00 0.00 0.00 3.18
2925 4100 2.442413 TGGTACTGGCATTTTGTAGGC 58.558 47.619 0.00 0.00 0.00 3.93
2926 4101 1.400494 GGTACTGGCATTTTGTAGGCG 59.600 52.381 0.00 0.00 0.00 5.52
2927 4102 2.081462 GTACTGGCATTTTGTAGGCGT 58.919 47.619 0.00 0.00 0.00 5.68
2928 4103 0.881118 ACTGGCATTTTGTAGGCGTG 59.119 50.000 0.00 0.00 0.00 5.34
2929 4104 0.171007 CTGGCATTTTGTAGGCGTGG 59.829 55.000 0.00 0.00 0.00 4.94
2930 4105 0.538516 TGGCATTTTGTAGGCGTGGT 60.539 50.000 0.00 0.00 0.00 4.16
2931 4106 0.601057 GGCATTTTGTAGGCGTGGTT 59.399 50.000 0.00 0.00 0.00 3.67
2932 4107 1.402325 GGCATTTTGTAGGCGTGGTTC 60.402 52.381 0.00 0.00 0.00 3.62
2933 4108 1.727857 GCATTTTGTAGGCGTGGTTCG 60.728 52.381 0.00 0.00 43.12 3.95
2934 4109 1.135803 CATTTTGTAGGCGTGGTTCGG 60.136 52.381 0.00 0.00 40.26 4.30
2935 4110 0.179051 TTTTGTAGGCGTGGTTCGGT 60.179 50.000 0.00 0.00 40.26 4.69
2936 4111 0.179051 TTTGTAGGCGTGGTTCGGTT 60.179 50.000 0.00 0.00 40.26 4.44
2937 4112 0.179051 TTGTAGGCGTGGTTCGGTTT 60.179 50.000 0.00 0.00 40.26 3.27
2938 4113 0.179051 TGTAGGCGTGGTTCGGTTTT 60.179 50.000 0.00 0.00 40.26 2.43
2939 4114 0.946528 GTAGGCGTGGTTCGGTTTTT 59.053 50.000 0.00 0.00 40.26 1.94
2940 4115 1.069703 GTAGGCGTGGTTCGGTTTTTC 60.070 52.381 0.00 0.00 40.26 2.29
2941 4116 1.008194 GGCGTGGTTCGGTTTTTCC 60.008 57.895 0.00 0.00 40.26 3.13
2942 4117 1.008194 GCGTGGTTCGGTTTTTCCC 60.008 57.895 0.00 0.00 40.26 3.97
2943 4118 1.726533 GCGTGGTTCGGTTTTTCCCA 61.727 55.000 0.00 0.00 40.26 4.37
2944 4119 0.955905 CGTGGTTCGGTTTTTCCCAT 59.044 50.000 0.00 0.00 35.71 4.00
2945 4120 1.338655 CGTGGTTCGGTTTTTCCCATT 59.661 47.619 0.00 0.00 35.71 3.16
2946 4121 2.223852 CGTGGTTCGGTTTTTCCCATTT 60.224 45.455 0.00 0.00 35.71 2.32
2947 4122 3.127589 GTGGTTCGGTTTTTCCCATTTG 58.872 45.455 0.00 0.00 0.00 2.32
2948 4123 2.766828 TGGTTCGGTTTTTCCCATTTGT 59.233 40.909 0.00 0.00 0.00 2.83
2949 4124 3.181474 TGGTTCGGTTTTTCCCATTTGTC 60.181 43.478 0.00 0.00 0.00 3.18
2950 4125 3.069016 GGTTCGGTTTTTCCCATTTGTCT 59.931 43.478 0.00 0.00 0.00 3.41
2951 4126 4.295870 GTTCGGTTTTTCCCATTTGTCTC 58.704 43.478 0.00 0.00 0.00 3.36
2952 4127 3.827722 TCGGTTTTTCCCATTTGTCTCT 58.172 40.909 0.00 0.00 0.00 3.10
2953 4128 4.975631 TCGGTTTTTCCCATTTGTCTCTA 58.024 39.130 0.00 0.00 0.00 2.43
2954 4129 5.566469 TCGGTTTTTCCCATTTGTCTCTAT 58.434 37.500 0.00 0.00 0.00 1.98
2955 4130 5.646360 TCGGTTTTTCCCATTTGTCTCTATC 59.354 40.000 0.00 0.00 0.00 2.08
2956 4131 5.648092 CGGTTTTTCCCATTTGTCTCTATCT 59.352 40.000 0.00 0.00 0.00 1.98
2957 4132 6.821665 CGGTTTTTCCCATTTGTCTCTATCTA 59.178 38.462 0.00 0.00 0.00 1.98
2958 4133 7.499232 CGGTTTTTCCCATTTGTCTCTATCTAT 59.501 37.037 0.00 0.00 0.00 1.98
2959 4134 9.190317 GGTTTTTCCCATTTGTCTCTATCTATT 57.810 33.333 0.00 0.00 0.00 1.73
2961 4136 7.807977 TTTCCCATTTGTCTCTATCTATTGC 57.192 36.000 0.00 0.00 0.00 3.56
2962 4137 6.753913 TCCCATTTGTCTCTATCTATTGCT 57.246 37.500 0.00 0.00 0.00 3.91
2963 4138 6.528321 TCCCATTTGTCTCTATCTATTGCTG 58.472 40.000 0.00 0.00 0.00 4.41
2964 4139 5.704515 CCCATTTGTCTCTATCTATTGCTGG 59.295 44.000 0.00 0.00 0.00 4.85
2965 4140 5.704515 CCATTTGTCTCTATCTATTGCTGGG 59.295 44.000 0.00 0.00 0.00 4.45
2966 4141 6.464892 CCATTTGTCTCTATCTATTGCTGGGA 60.465 42.308 0.00 0.00 0.00 4.37
2967 4142 6.560003 TTTGTCTCTATCTATTGCTGGGAA 57.440 37.500 0.00 0.00 0.00 3.97
2968 4143 5.798125 TGTCTCTATCTATTGCTGGGAAG 57.202 43.478 0.00 0.00 0.00 3.46
2969 4144 4.590647 TGTCTCTATCTATTGCTGGGAAGG 59.409 45.833 0.00 0.00 0.00 3.46
2970 4145 4.591072 GTCTCTATCTATTGCTGGGAAGGT 59.409 45.833 0.00 0.00 0.00 3.50
2971 4146 5.775701 GTCTCTATCTATTGCTGGGAAGGTA 59.224 44.000 0.00 0.00 0.00 3.08
2972 4147 6.439058 GTCTCTATCTATTGCTGGGAAGGTAT 59.561 42.308 0.00 0.00 0.00 2.73
2973 4148 7.616150 GTCTCTATCTATTGCTGGGAAGGTATA 59.384 40.741 0.00 0.00 0.00 1.47
2974 4149 8.347591 TCTCTATCTATTGCTGGGAAGGTATAT 58.652 37.037 0.00 0.00 0.00 0.86
2975 4150 8.311395 TCTATCTATTGCTGGGAAGGTATATG 57.689 38.462 0.00 0.00 0.00 1.78
2976 4151 8.122481 TCTATCTATTGCTGGGAAGGTATATGA 58.878 37.037 0.00 0.00 0.00 2.15
2977 4152 7.574021 ATCTATTGCTGGGAAGGTATATGAA 57.426 36.000 0.00 0.00 0.00 2.57
2978 4153 7.387265 TCTATTGCTGGGAAGGTATATGAAA 57.613 36.000 0.00 0.00 0.00 2.69
2979 4154 7.453393 TCTATTGCTGGGAAGGTATATGAAAG 58.547 38.462 0.00 0.00 0.00 2.62
2980 4155 5.708736 TTGCTGGGAAGGTATATGAAAGA 57.291 39.130 0.00 0.00 0.00 2.52
2981 4156 5.708736 TGCTGGGAAGGTATATGAAAGAA 57.291 39.130 0.00 0.00 0.00 2.52
2982 4157 5.684704 TGCTGGGAAGGTATATGAAAGAAG 58.315 41.667 0.00 0.00 0.00 2.85
2983 4158 5.066593 GCTGGGAAGGTATATGAAAGAAGG 58.933 45.833 0.00 0.00 0.00 3.46
2984 4159 5.398012 GCTGGGAAGGTATATGAAAGAAGGT 60.398 44.000 0.00 0.00 0.00 3.50
2985 4160 6.183361 GCTGGGAAGGTATATGAAAGAAGGTA 60.183 42.308 0.00 0.00 0.00 3.08
2986 4161 7.637301 GCTGGGAAGGTATATGAAAGAAGGTAA 60.637 40.741 0.00 0.00 0.00 2.85
2987 4162 7.571025 TGGGAAGGTATATGAAAGAAGGTAAC 58.429 38.462 0.00 0.00 0.00 2.50
2988 4163 6.704937 GGGAAGGTATATGAAAGAAGGTAACG 59.295 42.308 0.00 0.00 46.39 3.18
2989 4164 7.418254 GGGAAGGTATATGAAAGAAGGTAACGA 60.418 40.741 0.00 0.00 46.39 3.85
2990 4165 7.983484 GGAAGGTATATGAAAGAAGGTAACGAA 59.017 37.037 0.00 0.00 46.39 3.85
2991 4166 9.374838 GAAGGTATATGAAAGAAGGTAACGAAA 57.625 33.333 0.00 0.00 46.39 3.46
2992 4167 9.729281 AAGGTATATGAAAGAAGGTAACGAAAA 57.271 29.630 0.00 0.00 46.39 2.29
2993 4168 9.379791 AGGTATATGAAAGAAGGTAACGAAAAG 57.620 33.333 0.00 0.00 46.39 2.27
2994 4169 9.159364 GGTATATGAAAGAAGGTAACGAAAAGT 57.841 33.333 0.00 0.00 46.39 2.66
2995 4170 9.968743 GTATATGAAAGAAGGTAACGAAAAGTG 57.031 33.333 0.00 0.00 46.39 3.16
2996 4171 5.744666 TGAAAGAAGGTAACGAAAAGTGG 57.255 39.130 0.00 0.00 46.39 4.00
2997 4172 5.430007 TGAAAGAAGGTAACGAAAAGTGGA 58.570 37.500 0.00 0.00 46.39 4.02
2998 4173 6.059484 TGAAAGAAGGTAACGAAAAGTGGAT 58.941 36.000 0.00 0.00 46.39 3.41
2999 4174 6.204108 TGAAAGAAGGTAACGAAAAGTGGATC 59.796 38.462 0.00 0.00 46.39 3.36
3000 4175 4.243270 AGAAGGTAACGAAAAGTGGATCG 58.757 43.478 0.00 0.00 44.33 3.69
3001 4176 3.947910 AGGTAACGAAAAGTGGATCGA 57.052 42.857 1.84 0.00 41.43 3.59
3002 4177 3.846360 AGGTAACGAAAAGTGGATCGAG 58.154 45.455 1.84 0.00 41.43 4.04
3003 4178 2.928116 GGTAACGAAAAGTGGATCGAGG 59.072 50.000 1.84 0.00 41.43 4.63
3004 4179 3.367703 GGTAACGAAAAGTGGATCGAGGA 60.368 47.826 1.84 0.00 41.43 3.71
3005 4180 3.396260 AACGAAAAGTGGATCGAGGAA 57.604 42.857 1.84 0.00 41.43 3.36
3006 4181 3.611766 ACGAAAAGTGGATCGAGGAAT 57.388 42.857 1.84 0.00 41.43 3.01
3007 4182 4.730949 ACGAAAAGTGGATCGAGGAATA 57.269 40.909 1.84 0.00 41.43 1.75
3008 4183 5.080969 ACGAAAAGTGGATCGAGGAATAA 57.919 39.130 1.84 0.00 41.43 1.40
3009 4184 5.484715 ACGAAAAGTGGATCGAGGAATAAA 58.515 37.500 1.84 0.00 41.43 1.40
3010 4185 5.935789 ACGAAAAGTGGATCGAGGAATAAAA 59.064 36.000 1.84 0.00 41.43 1.52
3011 4186 6.092259 ACGAAAAGTGGATCGAGGAATAAAAG 59.908 38.462 1.84 0.00 41.43 2.27
3012 4187 5.819825 AAAGTGGATCGAGGAATAAAAGC 57.180 39.130 0.00 0.00 0.00 3.51
3013 4188 4.762289 AGTGGATCGAGGAATAAAAGCT 57.238 40.909 0.00 0.00 0.00 3.74
3014 4189 4.698575 AGTGGATCGAGGAATAAAAGCTC 58.301 43.478 0.00 0.00 0.00 4.09
3015 4190 3.491267 GTGGATCGAGGAATAAAAGCTCG 59.509 47.826 0.00 0.00 38.69 5.03
3019 4194 4.713824 TCGAGGAATAAAAGCTCGAAGA 57.286 40.909 0.00 0.00 42.42 2.87
3020 4195 4.421948 TCGAGGAATAAAAGCTCGAAGAC 58.578 43.478 0.00 0.00 42.42 3.01
3021 4196 4.082408 TCGAGGAATAAAAGCTCGAAGACA 60.082 41.667 0.00 0.00 42.42 3.41
3022 4197 4.625742 CGAGGAATAAAAGCTCGAAGACAA 59.374 41.667 0.00 0.00 39.56 3.18
3023 4198 5.120208 CGAGGAATAAAAGCTCGAAGACAAA 59.880 40.000 0.00 0.00 39.56 2.83
3024 4199 6.487689 AGGAATAAAAGCTCGAAGACAAAG 57.512 37.500 0.00 0.00 0.00 2.77
3025 4200 6.231211 AGGAATAAAAGCTCGAAGACAAAGA 58.769 36.000 0.00 0.00 0.00 2.52
3026 4201 6.370166 AGGAATAAAAGCTCGAAGACAAAGAG 59.630 38.462 0.00 0.00 35.28 2.85
3027 4202 6.369065 GGAATAAAAGCTCGAAGACAAAGAGA 59.631 38.462 0.00 0.00 34.13 3.10
3028 4203 7.095187 GGAATAAAAGCTCGAAGACAAAGAGAA 60.095 37.037 0.00 0.00 34.13 2.87
3029 4204 5.411083 AAAAGCTCGAAGACAAAGAGAAC 57.589 39.130 0.00 0.00 34.13 3.01
3030 4205 4.329462 AAGCTCGAAGACAAAGAGAACT 57.671 40.909 0.00 0.00 34.13 3.01
3031 4206 4.329462 AGCTCGAAGACAAAGAGAACTT 57.671 40.909 0.00 0.00 38.05 2.66
3032 4207 4.303282 AGCTCGAAGACAAAGAGAACTTC 58.697 43.478 0.00 0.00 35.05 3.01
3033 4208 4.038642 AGCTCGAAGACAAAGAGAACTTCT 59.961 41.667 0.00 0.00 37.27 2.85
3034 4209 4.384547 GCTCGAAGACAAAGAGAACTTCTC 59.615 45.833 10.43 10.43 43.70 2.87
3035 4210 4.872664 TCGAAGACAAAGAGAACTTCTCC 58.127 43.478 14.19 0.43 44.42 3.71
3036 4211 3.670991 CGAAGACAAAGAGAACTTCTCCG 59.329 47.826 14.19 6.96 44.42 4.63
3037 4212 3.669251 AGACAAAGAGAACTTCTCCGG 57.331 47.619 14.19 0.00 44.42 5.14
3038 4213 2.300437 AGACAAAGAGAACTTCTCCGGG 59.700 50.000 14.19 7.24 44.42 5.73
3039 4214 2.037381 GACAAAGAGAACTTCTCCGGGT 59.963 50.000 14.19 9.98 44.42 5.28
3040 4215 2.438392 ACAAAGAGAACTTCTCCGGGTT 59.562 45.455 14.19 0.00 44.42 4.11
3041 4216 3.644738 ACAAAGAGAACTTCTCCGGGTTA 59.355 43.478 14.19 0.00 44.42 2.85
3042 4217 4.246458 CAAAGAGAACTTCTCCGGGTTAG 58.754 47.826 14.19 0.00 44.42 2.34
3043 4218 3.172471 AGAGAACTTCTCCGGGTTAGT 57.828 47.619 14.19 0.00 44.42 2.24
3044 4219 2.826725 AGAGAACTTCTCCGGGTTAGTG 59.173 50.000 14.19 0.00 44.42 2.74
3045 4220 1.900486 AGAACTTCTCCGGGTTAGTGG 59.100 52.381 0.00 0.00 0.00 4.00
3046 4221 1.897802 GAACTTCTCCGGGTTAGTGGA 59.102 52.381 0.00 0.00 0.00 4.02
3051 4226 2.674958 TCCGGGTTAGTGGAGAACC 58.325 57.895 0.00 0.00 44.84 3.62
3060 4235 3.169378 TGGAGAACCCATGCAGCA 58.831 55.556 0.00 0.00 40.82 4.41
3061 4236 1.693034 TGGAGAACCCATGCAGCAT 59.307 52.632 0.52 0.52 40.82 3.79
3062 4237 0.681887 TGGAGAACCCATGCAGCATG 60.682 55.000 26.25 26.25 40.82 4.06
3070 4245 2.795165 CATGCAGCATGGCTTCTCT 58.205 52.632 25.63 0.00 36.40 3.10
3071 4246 0.382158 CATGCAGCATGGCTTCTCTG 59.618 55.000 25.63 0.00 36.40 3.35
3072 4247 0.255033 ATGCAGCATGGCTTCTCTGA 59.745 50.000 7.23 0.00 36.40 3.27
3073 4248 0.675837 TGCAGCATGGCTTCTCTGAC 60.676 55.000 0.00 0.00 36.40 3.51
3074 4249 1.703438 GCAGCATGGCTTCTCTGACG 61.703 60.000 0.00 0.00 36.40 4.35
3075 4250 0.108472 CAGCATGGCTTCTCTGACGA 60.108 55.000 0.00 0.00 36.40 4.20
3076 4251 0.175302 AGCATGGCTTCTCTGACGAG 59.825 55.000 0.00 0.00 33.89 4.18
3077 4252 1.427592 GCATGGCTTCTCTGACGAGC 61.428 60.000 0.00 0.17 37.19 5.03
3078 4253 0.108472 CATGGCTTCTCTGACGAGCA 60.108 55.000 9.05 0.00 38.14 4.26
3079 4254 0.175302 ATGGCTTCTCTGACGAGCAG 59.825 55.000 9.05 0.00 46.31 4.24
3080 4255 1.153667 GGCTTCTCTGACGAGCAGG 60.154 63.158 9.49 2.59 44.98 4.85
3081 4256 1.599606 GGCTTCTCTGACGAGCAGGA 61.600 60.000 9.49 4.46 44.98 3.86
3082 4257 0.244994 GCTTCTCTGACGAGCAGGAA 59.755 55.000 9.49 10.16 44.98 3.36
3083 4258 1.735369 GCTTCTCTGACGAGCAGGAAG 60.735 57.143 21.49 21.49 45.16 3.46
3084 4259 0.244994 TTCTCTGACGAGCAGGAAGC 59.755 55.000 9.49 0.00 44.98 3.86
3094 4269 2.904664 GCAGGAAGCCACAAAAAGC 58.095 52.632 0.00 0.00 37.23 3.51
3095 4270 0.104671 GCAGGAAGCCACAAAAAGCA 59.895 50.000 0.00 0.00 37.23 3.91
3096 4271 1.473080 GCAGGAAGCCACAAAAAGCAA 60.473 47.619 0.00 0.00 37.23 3.91
3097 4272 2.807837 GCAGGAAGCCACAAAAAGCAAT 60.808 45.455 0.00 0.00 37.23 3.56
3098 4273 2.803956 CAGGAAGCCACAAAAAGCAATG 59.196 45.455 0.00 0.00 0.00 2.82
3099 4274 2.435437 AGGAAGCCACAAAAAGCAATGT 59.565 40.909 0.00 0.00 0.00 2.71
3100 4275 3.640967 AGGAAGCCACAAAAAGCAATGTA 59.359 39.130 0.00 0.00 0.00 2.29
3101 4276 3.740832 GGAAGCCACAAAAAGCAATGTAC 59.259 43.478 0.00 0.00 0.00 2.90
3102 4277 4.501400 GGAAGCCACAAAAAGCAATGTACT 60.501 41.667 0.00 0.00 0.00 2.73
3103 4278 5.278758 GGAAGCCACAAAAAGCAATGTACTA 60.279 40.000 0.00 0.00 0.00 1.82
3104 4279 5.982890 AGCCACAAAAAGCAATGTACTAT 57.017 34.783 0.00 0.00 0.00 2.12
3105 4280 6.345096 AGCCACAAAAAGCAATGTACTATT 57.655 33.333 0.00 0.00 0.00 1.73
3106 4281 6.158598 AGCCACAAAAAGCAATGTACTATTG 58.841 36.000 11.43 11.43 0.00 1.90
3107 4282 5.925969 GCCACAAAAAGCAATGTACTATTGT 59.074 36.000 15.05 0.00 31.31 2.71
3108 4283 7.040062 AGCCACAAAAAGCAATGTACTATTGTA 60.040 33.333 15.05 0.00 30.56 2.41
3109 4284 7.596995 GCCACAAAAAGCAATGTACTATTGTAA 59.403 33.333 15.05 0.00 30.56 2.41
3110 4285 8.911662 CCACAAAAAGCAATGTACTATTGTAAC 58.088 33.333 15.05 4.25 30.56 2.50
3111 4286 9.677567 CACAAAAAGCAATGTACTATTGTAACT 57.322 29.630 15.05 5.81 30.56 2.24
3112 4287 9.677567 ACAAAAAGCAATGTACTATTGTAACTG 57.322 29.630 15.05 10.63 30.17 3.16
3113 4288 9.891828 CAAAAAGCAATGTACTATTGTAACTGA 57.108 29.630 15.05 0.00 0.00 3.41
3141 4316 4.765611 GGCGAAGTTGCCGAATTC 57.234 55.556 0.00 0.00 46.75 2.17
3142 4317 2.171635 GGCGAAGTTGCCGAATTCT 58.828 52.632 3.52 0.00 46.75 2.40
3143 4318 0.179189 GGCGAAGTTGCCGAATTCTG 60.179 55.000 3.52 0.00 46.75 3.02
3144 4319 0.796312 GCGAAGTTGCCGAATTCTGA 59.204 50.000 3.52 0.00 0.00 3.27
3145 4320 1.196808 GCGAAGTTGCCGAATTCTGAA 59.803 47.619 3.52 0.00 0.00 3.02
3146 4321 2.350388 GCGAAGTTGCCGAATTCTGAAA 60.350 45.455 3.52 0.00 0.00 2.69
3147 4322 3.670627 GCGAAGTTGCCGAATTCTGAAAT 60.671 43.478 3.52 0.00 0.00 2.17
3148 4323 4.091424 CGAAGTTGCCGAATTCTGAAATC 58.909 43.478 3.52 0.00 0.00 2.17
3149 4324 4.378356 CGAAGTTGCCGAATTCTGAAATCA 60.378 41.667 3.52 0.00 0.00 2.57
3150 4325 4.425577 AGTTGCCGAATTCTGAAATCAC 57.574 40.909 3.52 0.00 0.00 3.06
3151 4326 4.074970 AGTTGCCGAATTCTGAAATCACT 58.925 39.130 3.52 0.00 0.00 3.41
3152 4327 5.245531 AGTTGCCGAATTCTGAAATCACTA 58.754 37.500 3.52 0.00 0.00 2.74
3153 4328 5.122396 AGTTGCCGAATTCTGAAATCACTAC 59.878 40.000 3.52 4.71 0.00 2.73
3154 4329 4.574892 TGCCGAATTCTGAAATCACTACA 58.425 39.130 3.52 0.00 0.00 2.74
3155 4330 4.631377 TGCCGAATTCTGAAATCACTACAG 59.369 41.667 3.52 0.00 0.00 2.74
3156 4331 4.034510 GCCGAATTCTGAAATCACTACAGG 59.965 45.833 3.52 0.00 33.19 4.00
3157 4332 4.034510 CCGAATTCTGAAATCACTACAGGC 59.965 45.833 3.52 0.00 33.19 4.85
3158 4333 4.631377 CGAATTCTGAAATCACTACAGGCA 59.369 41.667 3.52 0.00 33.19 4.75
3159 4334 5.295292 CGAATTCTGAAATCACTACAGGCAT 59.705 40.000 3.52 0.00 33.19 4.40
3160 4335 6.183360 CGAATTCTGAAATCACTACAGGCATT 60.183 38.462 3.52 0.00 33.19 3.56
3161 4336 5.885230 TTCTGAAATCACTACAGGCATTG 57.115 39.130 0.00 0.00 33.19 2.82
3162 4337 4.910195 TCTGAAATCACTACAGGCATTGT 58.090 39.130 0.00 0.00 43.96 2.71
3163 4338 4.696877 TCTGAAATCACTACAGGCATTGTG 59.303 41.667 3.58 0.00 41.10 3.33
3164 4339 3.191162 TGAAATCACTACAGGCATTGTGC 59.809 43.478 3.58 0.00 44.08 4.57
3176 4351 3.693300 GCATTGTGCAGAAAATTGTCG 57.307 42.857 0.00 0.00 44.26 4.35
3177 4352 2.409378 GCATTGTGCAGAAAATTGTCGG 59.591 45.455 0.00 0.00 44.26 4.79
3178 4353 2.132740 TTGTGCAGAAAATTGTCGGC 57.867 45.000 13.25 13.25 38.95 5.54
3179 4354 0.313672 TGTGCAGAAAATTGTCGGCC 59.686 50.000 16.81 9.54 37.86 6.13
3180 4355 0.388520 GTGCAGAAAATTGTCGGCCC 60.389 55.000 16.81 2.96 37.86 5.80
3181 4356 0.539438 TGCAGAAAATTGTCGGCCCT 60.539 50.000 16.81 0.00 37.86 5.19
3182 4357 1.271652 TGCAGAAAATTGTCGGCCCTA 60.272 47.619 16.81 0.00 37.86 3.53
3183 4358 1.816224 GCAGAAAATTGTCGGCCCTAA 59.184 47.619 9.41 0.00 33.20 2.69
3184 4359 2.230266 GCAGAAAATTGTCGGCCCTAAA 59.770 45.455 9.41 0.00 33.20 1.85
3185 4360 3.305744 GCAGAAAATTGTCGGCCCTAAAA 60.306 43.478 9.41 0.00 33.20 1.52
3186 4361 4.797933 GCAGAAAATTGTCGGCCCTAAAAA 60.798 41.667 9.41 0.00 33.20 1.94
3187 4362 4.684242 CAGAAAATTGTCGGCCCTAAAAAC 59.316 41.667 0.00 0.00 0.00 2.43
3188 4363 3.291809 AAATTGTCGGCCCTAAAAACG 57.708 42.857 0.00 0.00 0.00 3.60
3189 4364 2.188062 ATTGTCGGCCCTAAAAACGA 57.812 45.000 0.00 0.00 0.00 3.85
3190 4365 2.188062 TTGTCGGCCCTAAAAACGAT 57.812 45.000 0.00 0.00 37.69 3.73
3191 4366 1.444836 TGTCGGCCCTAAAAACGATG 58.555 50.000 0.00 0.00 37.69 3.84
3192 4367 1.270947 TGTCGGCCCTAAAAACGATGT 60.271 47.619 0.00 0.00 37.69 3.06
3193 4368 1.129811 GTCGGCCCTAAAAACGATGTG 59.870 52.381 0.00 0.00 37.69 3.21
3194 4369 1.161843 CGGCCCTAAAAACGATGTGT 58.838 50.000 0.00 0.00 0.00 3.72
3195 4370 1.129811 CGGCCCTAAAAACGATGTGTC 59.870 52.381 0.00 0.00 0.00 3.67
3196 4371 1.471287 GGCCCTAAAAACGATGTGTCC 59.529 52.381 0.00 0.00 0.00 4.02
3197 4372 1.471287 GCCCTAAAAACGATGTGTCCC 59.529 52.381 0.00 0.00 0.00 4.46
3198 4373 2.089201 CCCTAAAAACGATGTGTCCCC 58.911 52.381 0.00 0.00 0.00 4.81
3199 4374 2.553466 CCCTAAAAACGATGTGTCCCCA 60.553 50.000 0.00 0.00 0.00 4.96
3200 4375 3.352648 CCTAAAAACGATGTGTCCCCAT 58.647 45.455 0.00 0.00 0.00 4.00
3201 4376 3.128589 CCTAAAAACGATGTGTCCCCATG 59.871 47.826 0.00 0.00 0.00 3.66
3202 4377 2.577606 AAAACGATGTGTCCCCATGA 57.422 45.000 0.00 0.00 0.00 3.07
3203 4378 2.806945 AAACGATGTGTCCCCATGAT 57.193 45.000 0.00 0.00 0.00 2.45
3204 4379 2.332063 AACGATGTGTCCCCATGATC 57.668 50.000 0.00 0.00 0.00 2.92
3205 4380 1.203237 ACGATGTGTCCCCATGATCA 58.797 50.000 0.00 0.00 0.00 2.92
3206 4381 1.770658 ACGATGTGTCCCCATGATCAT 59.229 47.619 1.18 1.18 0.00 2.45
3207 4382 2.173356 ACGATGTGTCCCCATGATCATT 59.827 45.455 5.16 0.00 0.00 2.57
3208 4383 3.216800 CGATGTGTCCCCATGATCATTT 58.783 45.455 5.16 0.00 0.00 2.32
3209 4384 3.633525 CGATGTGTCCCCATGATCATTTT 59.366 43.478 5.16 0.00 0.00 1.82
3210 4385 4.821260 CGATGTGTCCCCATGATCATTTTA 59.179 41.667 5.16 0.00 0.00 1.52
3211 4386 5.277974 CGATGTGTCCCCATGATCATTTTAC 60.278 44.000 5.16 3.12 0.00 2.01
3212 4387 4.928263 TGTGTCCCCATGATCATTTTACA 58.072 39.130 5.16 5.72 0.00 2.41
3213 4388 5.517924 TGTGTCCCCATGATCATTTTACAT 58.482 37.500 5.16 0.00 0.00 2.29
3214 4389 5.593909 TGTGTCCCCATGATCATTTTACATC 59.406 40.000 5.16 4.76 0.00 3.06
3215 4390 5.593909 GTGTCCCCATGATCATTTTACATCA 59.406 40.000 5.16 0.00 33.55 3.07
3216 4391 5.593909 TGTCCCCATGATCATTTTACATCAC 59.406 40.000 5.16 0.00 31.80 3.06
3217 4392 4.821260 TCCCCATGATCATTTTACATCACG 59.179 41.667 5.16 0.00 31.80 4.35
3218 4393 4.821260 CCCCATGATCATTTTACATCACGA 59.179 41.667 5.16 0.00 31.80 4.35
3219 4394 5.474532 CCCCATGATCATTTTACATCACGAT 59.525 40.000 5.16 0.00 31.80 3.73
3220 4395 6.654582 CCCCATGATCATTTTACATCACGATA 59.345 38.462 5.16 0.00 31.80 2.92
3221 4396 7.337689 CCCCATGATCATTTTACATCACGATAT 59.662 37.037 5.16 0.00 31.80 1.63
3222 4397 8.393366 CCCATGATCATTTTACATCACGATATC 58.607 37.037 5.16 0.00 31.80 1.63
3223 4398 9.159364 CCATGATCATTTTACATCACGATATCT 57.841 33.333 5.16 0.00 31.80 1.98
3235 4410 8.458573 ACATCACGATATCTTTCTCTTCTAGT 57.541 34.615 0.34 0.00 0.00 2.57
3236 4411 8.908903 ACATCACGATATCTTTCTCTTCTAGTT 58.091 33.333 0.34 0.00 0.00 2.24
3240 4415 9.123709 CACGATATCTTTCTCTTCTAGTTATGC 57.876 37.037 0.34 0.00 0.00 3.14
3241 4416 8.851145 ACGATATCTTTCTCTTCTAGTTATGCA 58.149 33.333 0.34 0.00 0.00 3.96
3242 4417 9.853555 CGATATCTTTCTCTTCTAGTTATGCAT 57.146 33.333 3.79 3.79 0.00 3.96
3247 4422 9.167311 TCTTTCTCTTCTAGTTATGCATTTTCC 57.833 33.333 3.54 0.00 0.00 3.13
3248 4423 8.862325 TTTCTCTTCTAGTTATGCATTTTCCA 57.138 30.769 3.54 0.00 0.00 3.53
3249 4424 7.849804 TCTCTTCTAGTTATGCATTTTCCAC 57.150 36.000 3.54 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 4.065789 GTTCTTCAGTAGGGTGTCCAAAG 58.934 47.826 0.00 0.00 34.83 2.77
39 40 5.250543 TCCATTGATTCCCAGTTCTTCAGTA 59.749 40.000 0.00 0.00 0.00 2.74
40 41 4.043310 TCCATTGATTCCCAGTTCTTCAGT 59.957 41.667 0.00 0.00 0.00 3.41
45 47 4.868172 TCATCCATTGATTCCCAGTTCT 57.132 40.909 0.00 0.00 0.00 3.01
77 85 9.793259 AAGAGGAATTTTTATTCAGACAGTACA 57.207 29.630 0.00 0.00 32.39 2.90
100 108 7.231317 ACATGAGCAATCTTTAAGTTGGAAAGA 59.769 33.333 0.00 3.82 44.71 2.52
101 109 7.327761 CACATGAGCAATCTTTAAGTTGGAAAG 59.672 37.037 0.00 0.00 35.60 2.62
194 205 5.302360 TCAGTCCGTATTTTGCATATACCC 58.698 41.667 11.69 3.65 0.00 3.69
195 206 6.563381 CGTTCAGTCCGTATTTTGCATATACC 60.563 42.308 11.69 2.04 0.00 2.73
206 217 1.475682 GGAGGTCGTTCAGTCCGTATT 59.524 52.381 0.00 0.00 33.11 1.89
447 459 4.816984 TCTCCGCCTCCTCCGTCC 62.817 72.222 0.00 0.00 0.00 4.79
755 770 1.349688 CAACCTGGCTACCACTAACCA 59.650 52.381 0.00 0.00 0.00 3.67
918 956 5.741040 CGAACTCTACGTAAAATCCTACACC 59.259 44.000 0.00 0.00 0.00 4.16
923 961 4.460382 TCCACGAACTCTACGTAAAATCCT 59.540 41.667 0.00 0.00 42.07 3.24
941 979 0.806102 CACGGTAGCAATCCTCCACG 60.806 60.000 0.00 0.00 0.00 4.94
945 983 0.527817 CGGACACGGTAGCAATCCTC 60.528 60.000 5.00 0.00 36.18 3.71
952 990 0.102481 ATCACATCGGACACGGTAGC 59.898 55.000 0.00 0.00 41.39 3.58
963 1001 0.104855 ACGACCCATGGATCACATCG 59.895 55.000 15.22 13.97 37.84 3.84
967 1012 1.819632 GCCACGACCCATGGATCAC 60.820 63.158 15.22 0.24 39.87 3.06
1008 1053 2.067091 TATGGGAAGTCGTAGCGCGG 62.067 60.000 8.83 0.00 41.72 6.46
1225 1273 3.522808 GGAGACGCCGGTGTAGAT 58.477 61.111 23.00 10.36 0.00 1.98
1320 1368 6.799925 ACGATTTTGAGCTTTTAATTACACCG 59.200 34.615 0.00 0.00 0.00 4.94
1321 1369 7.593644 ACACGATTTTGAGCTTTTAATTACACC 59.406 33.333 0.00 0.00 0.00 4.16
1322 1370 8.502161 ACACGATTTTGAGCTTTTAATTACAC 57.498 30.769 0.00 0.00 0.00 2.90
1323 1371 8.963130 CAACACGATTTTGAGCTTTTAATTACA 58.037 29.630 0.00 0.00 0.00 2.41
1324 1372 8.964150 ACAACACGATTTTGAGCTTTTAATTAC 58.036 29.630 0.00 0.00 0.00 1.89
1325 1373 9.176181 GACAACACGATTTTGAGCTTTTAATTA 57.824 29.630 0.00 0.00 0.00 1.40
1326 1374 7.704472 TGACAACACGATTTTGAGCTTTTAATT 59.296 29.630 0.00 0.00 0.00 1.40
1327 1375 7.199766 TGACAACACGATTTTGAGCTTTTAAT 58.800 30.769 0.00 0.00 0.00 1.40
1349 1397 2.158959 CGCGATCGACCCACTTGAC 61.159 63.158 21.57 0.00 38.10 3.18
1669 1731 0.638292 TACCTCCGGGGATAGTTGGT 59.362 55.000 0.37 0.00 38.76 3.67
1721 1791 5.773680 TCCGGGGTTGATGTTACAAAAATAA 59.226 36.000 0.00 0.00 0.00 1.40
1722 1792 5.322754 TCCGGGGTTGATGTTACAAAAATA 58.677 37.500 0.00 0.00 0.00 1.40
1723 1793 4.153411 TCCGGGGTTGATGTTACAAAAAT 58.847 39.130 0.00 0.00 0.00 1.82
1736 1806 0.178068 ATTCGTCATCTCCGGGGTTG 59.822 55.000 6.00 6.00 0.00 3.77
2202 3363 1.524165 CGACGGAACCCAACCACAA 60.524 57.895 0.00 0.00 0.00 3.33
2208 3369 1.301401 CAAGCTCGACGGAACCCAA 60.301 57.895 0.00 0.00 0.00 4.12
2261 3423 2.222027 ACTAATCCATAAAGGCGCTGC 58.778 47.619 7.64 0.00 37.29 5.25
2293 3467 4.691216 GTCTAACTCAATGAGACAACCACC 59.309 45.833 18.20 0.00 39.54 4.61
2315 3489 3.841845 TGTTACTACCCATTGTGGCTAGT 59.158 43.478 8.55 8.55 35.79 2.57
2316 3490 4.481368 TGTTACTACCCATTGTGGCTAG 57.519 45.455 0.00 0.00 35.79 3.42
2317 3491 6.563037 TTATGTTACTACCCATTGTGGCTA 57.437 37.500 0.00 0.00 35.79 3.93
2318 3492 5.444744 TTATGTTACTACCCATTGTGGCT 57.555 39.130 0.00 0.00 35.79 4.75
2319 3493 6.518208 TTTTATGTTACTACCCATTGTGGC 57.482 37.500 0.00 0.00 35.79 5.01
2320 3494 9.403583 ACTATTTTATGTTACTACCCATTGTGG 57.596 33.333 0.00 0.00 37.25 4.17
2331 3505 9.469097 TGGGCAATGTTACTATTTTATGTTACT 57.531 29.630 0.00 0.00 0.00 2.24
2367 3541 9.901651 TCCCCATTATAGAGGTAGTAACATAAA 57.098 33.333 0.00 0.00 0.00 1.40
2368 3542 9.543231 CTCCCCATTATAGAGGTAGTAACATAA 57.457 37.037 0.00 0.00 0.00 1.90
2369 3543 8.685311 ACTCCCCATTATAGAGGTAGTAACATA 58.315 37.037 0.00 0.00 31.70 2.29
2370 3544 7.545546 ACTCCCCATTATAGAGGTAGTAACAT 58.454 38.462 0.00 0.00 31.70 2.71
2371 3545 6.930475 ACTCCCCATTATAGAGGTAGTAACA 58.070 40.000 0.00 0.00 31.70 2.41
2372 3546 8.801299 GTTACTCCCCATTATAGAGGTAGTAAC 58.199 40.741 19.08 19.08 40.83 2.50
2373 3547 8.513658 TGTTACTCCCCATTATAGAGGTAGTAA 58.486 37.037 10.48 10.48 33.05 2.24
2374 3548 8.060727 TGTTACTCCCCATTATAGAGGTAGTA 57.939 38.462 0.00 0.00 31.70 1.82
2375 3549 6.930475 TGTTACTCCCCATTATAGAGGTAGT 58.070 40.000 0.00 0.00 31.70 2.73
2376 3550 9.716556 ATATGTTACTCCCCATTATAGAGGTAG 57.283 37.037 0.00 0.00 31.70 3.18
2377 3551 9.488762 CATATGTTACTCCCCATTATAGAGGTA 57.511 37.037 0.00 0.00 31.70 3.08
2378 3552 7.962003 ACATATGTTACTCCCCATTATAGAGGT 59.038 37.037 1.41 0.00 31.70 3.85
2379 3553 8.260818 CACATATGTTACTCCCCATTATAGAGG 58.739 40.741 5.37 0.00 31.70 3.69
2380 3554 8.816894 ACACATATGTTACTCCCCATTATAGAG 58.183 37.037 5.37 0.00 34.46 2.43
2381 3555 8.593679 CACACATATGTTACTCCCCATTATAGA 58.406 37.037 5.37 0.00 36.72 1.98
2382 3556 7.824289 CCACACATATGTTACTCCCCATTATAG 59.176 40.741 5.37 0.00 36.72 1.31
2383 3557 7.293771 ACCACACATATGTTACTCCCCATTATA 59.706 37.037 5.37 0.00 36.72 0.98
2384 3558 6.102615 ACCACACATATGTTACTCCCCATTAT 59.897 38.462 5.37 0.00 36.72 1.28
2385 3559 5.430417 ACCACACATATGTTACTCCCCATTA 59.570 40.000 5.37 0.00 36.72 1.90
2386 3560 4.229582 ACCACACATATGTTACTCCCCATT 59.770 41.667 5.37 0.00 36.72 3.16
2387 3561 3.785887 ACCACACATATGTTACTCCCCAT 59.214 43.478 5.37 0.00 36.72 4.00
2388 3562 3.186283 ACCACACATATGTTACTCCCCA 58.814 45.455 5.37 0.00 36.72 4.96
2389 3563 3.926058 ACCACACATATGTTACTCCCC 57.074 47.619 5.37 0.00 36.72 4.81
2390 3564 5.736813 TGTTACCACACATATGTTACTCCC 58.263 41.667 5.37 0.00 36.72 4.30
2391 3565 6.238374 GCATGTTACCACACATATGTTACTCC 60.238 42.308 5.37 0.00 36.72 3.85
2392 3566 6.315144 TGCATGTTACCACACATATGTTACTC 59.685 38.462 5.37 0.00 36.72 2.59
2393 3567 6.176896 TGCATGTTACCACACATATGTTACT 58.823 36.000 5.37 0.00 36.72 2.24
2394 3568 6.429791 TGCATGTTACCACACATATGTTAC 57.570 37.500 5.37 0.00 36.72 2.50
2395 3569 6.431234 TGTTGCATGTTACCACACATATGTTA 59.569 34.615 5.37 0.00 36.72 2.41
2396 3570 5.242615 TGTTGCATGTTACCACACATATGTT 59.757 36.000 5.37 0.00 36.72 2.71
2397 3571 4.764308 TGTTGCATGTTACCACACATATGT 59.236 37.500 1.41 1.41 40.80 2.29
2398 3572 5.094812 GTGTTGCATGTTACCACACATATG 58.905 41.667 10.02 0.00 35.51 1.78
2399 3573 5.009631 AGTGTTGCATGTTACCACACATAT 58.990 37.500 15.74 0.00 35.51 1.78
2400 3574 4.393834 AGTGTTGCATGTTACCACACATA 58.606 39.130 15.74 0.00 35.51 2.29
2401 3575 3.221771 AGTGTTGCATGTTACCACACAT 58.778 40.909 15.74 1.51 37.93 3.21
2402 3576 2.649190 AGTGTTGCATGTTACCACACA 58.351 42.857 15.74 0.00 35.03 3.72
2403 3577 3.708563 AAGTGTTGCATGTTACCACAC 57.291 42.857 7.36 7.36 35.03 3.82
2404 3578 6.398234 AATAAAGTGTTGCATGTTACCACA 57.602 33.333 0.00 0.00 37.31 4.17
2405 3579 8.980143 ATAAATAAAGTGTTGCATGTTACCAC 57.020 30.769 0.00 0.00 0.00 4.16
2437 3611 8.600668 ACACATATCAAGGCAATATGAGTCTAT 58.399 33.333 16.55 0.00 36.69 1.98
2438 3612 7.874528 CACACATATCAAGGCAATATGAGTCTA 59.125 37.037 16.55 0.00 38.21 2.59
2439 3613 6.709397 CACACATATCAAGGCAATATGAGTCT 59.291 38.462 16.55 0.00 38.21 3.24
2440 3614 6.707608 TCACACATATCAAGGCAATATGAGTC 59.292 38.462 16.55 0.00 38.21 3.36
2441 3615 6.594744 TCACACATATCAAGGCAATATGAGT 58.405 36.000 16.55 13.12 39.75 3.41
2442 3616 7.174426 ACATCACACATATCAAGGCAATATGAG 59.826 37.037 16.55 12.67 38.73 2.90
2443 3617 6.999871 ACATCACACATATCAAGGCAATATGA 59.000 34.615 16.55 3.86 38.73 2.15
2444 3618 7.210718 ACATCACACATATCAAGGCAATATG 57.789 36.000 10.96 10.96 41.07 1.78
2445 3619 7.828508 AACATCACACATATCAAGGCAATAT 57.171 32.000 0.00 0.00 0.00 1.28
2446 3620 7.992608 AGTAACATCACACATATCAAGGCAATA 59.007 33.333 0.00 0.00 0.00 1.90
2447 3621 6.830324 AGTAACATCACACATATCAAGGCAAT 59.170 34.615 0.00 0.00 0.00 3.56
2448 3622 6.179756 AGTAACATCACACATATCAAGGCAA 58.820 36.000 0.00 0.00 0.00 4.52
2449 3623 5.744171 AGTAACATCACACATATCAAGGCA 58.256 37.500 0.00 0.00 0.00 4.75
2450 3624 5.817296 TGAGTAACATCACACATATCAAGGC 59.183 40.000 0.00 0.00 0.00 4.35
2451 3625 8.982685 GTATGAGTAACATCACACATATCAAGG 58.017 37.037 0.00 0.00 40.07 3.61
2452 3626 9.755804 AGTATGAGTAACATCACACATATCAAG 57.244 33.333 0.00 0.00 40.07 3.02
2458 3632 9.409918 ACTACTAGTATGAGTAACATCACACAT 57.590 33.333 2.33 0.00 40.07 3.21
2459 3633 8.803397 ACTACTAGTATGAGTAACATCACACA 57.197 34.615 2.33 0.00 40.07 3.72
2495 3669 6.223852 TGAAGAAAGAGAGACATGTGGTAAC 58.776 40.000 1.15 0.00 0.00 2.50
2496 3670 6.419484 TGAAGAAAGAGAGACATGTGGTAA 57.581 37.500 1.15 0.00 0.00 2.85
2497 3671 6.611613 ATGAAGAAAGAGAGACATGTGGTA 57.388 37.500 1.15 0.00 0.00 3.25
2498 3672 4.963318 TGAAGAAAGAGAGACATGTGGT 57.037 40.909 1.15 0.00 0.00 4.16
2499 3673 6.814506 AAATGAAGAAAGAGAGACATGTGG 57.185 37.500 1.15 0.00 0.00 4.17
2500 3674 9.770503 CAATAAATGAAGAAAGAGAGACATGTG 57.229 33.333 1.15 0.00 0.00 3.21
2501 3675 8.457261 GCAATAAATGAAGAAAGAGAGACATGT 58.543 33.333 0.00 0.00 0.00 3.21
2502 3676 8.675504 AGCAATAAATGAAGAAAGAGAGACATG 58.324 33.333 0.00 0.00 0.00 3.21
2503 3677 8.804912 AGCAATAAATGAAGAAAGAGAGACAT 57.195 30.769 0.00 0.00 0.00 3.06
2504 3678 8.509690 CAAGCAATAAATGAAGAAAGAGAGACA 58.490 33.333 0.00 0.00 0.00 3.41
2505 3679 7.484324 GCAAGCAATAAATGAAGAAAGAGAGAC 59.516 37.037 0.00 0.00 0.00 3.36
2506 3680 7.362401 GGCAAGCAATAAATGAAGAAAGAGAGA 60.362 37.037 0.00 0.00 0.00 3.10
2507 3681 6.750963 GGCAAGCAATAAATGAAGAAAGAGAG 59.249 38.462 0.00 0.00 0.00 3.20
2508 3682 6.209192 TGGCAAGCAATAAATGAAGAAAGAGA 59.791 34.615 0.00 0.00 0.00 3.10
2509 3683 6.309737 GTGGCAAGCAATAAATGAAGAAAGAG 59.690 38.462 0.00 0.00 0.00 2.85
2510 3684 6.158598 GTGGCAAGCAATAAATGAAGAAAGA 58.841 36.000 0.00 0.00 0.00 2.52
2511 3685 5.927689 TGTGGCAAGCAATAAATGAAGAAAG 59.072 36.000 0.00 0.00 0.00 2.62
2512 3686 5.851720 TGTGGCAAGCAATAAATGAAGAAA 58.148 33.333 0.00 0.00 0.00 2.52
2513 3687 5.465532 TGTGGCAAGCAATAAATGAAGAA 57.534 34.783 0.00 0.00 0.00 2.52
2514 3688 5.185442 TGATGTGGCAAGCAATAAATGAAGA 59.815 36.000 0.00 0.00 0.00 2.87
2515 3689 5.412640 TGATGTGGCAAGCAATAAATGAAG 58.587 37.500 0.00 0.00 0.00 3.02
2516 3690 5.402997 TGATGTGGCAAGCAATAAATGAA 57.597 34.783 0.00 0.00 0.00 2.57
2517 3691 5.361571 AGATGATGTGGCAAGCAATAAATGA 59.638 36.000 0.00 0.00 0.00 2.57
2518 3692 5.597806 AGATGATGTGGCAAGCAATAAATG 58.402 37.500 0.00 0.00 0.00 2.32
2519 3693 5.864418 AGATGATGTGGCAAGCAATAAAT 57.136 34.783 0.00 0.00 0.00 1.40
2520 3694 6.964807 ATAGATGATGTGGCAAGCAATAAA 57.035 33.333 0.00 0.00 0.00 1.40
2521 3695 6.964807 AATAGATGATGTGGCAAGCAATAA 57.035 33.333 0.00 0.00 0.00 1.40
2522 3696 6.964807 AAATAGATGATGTGGCAAGCAATA 57.035 33.333 0.00 0.00 0.00 1.90
2523 3697 5.864418 AAATAGATGATGTGGCAAGCAAT 57.136 34.783 0.00 0.00 0.00 3.56
2524 3698 5.664294 AAAATAGATGATGTGGCAAGCAA 57.336 34.783 0.00 0.00 0.00 3.91
2525 3699 6.774170 AGATAAAATAGATGATGTGGCAAGCA 59.226 34.615 0.00 0.00 0.00 3.91
2526 3700 7.211966 AGATAAAATAGATGATGTGGCAAGC 57.788 36.000 0.00 0.00 0.00 4.01
2527 3701 9.716531 TCTAGATAAAATAGATGATGTGGCAAG 57.283 33.333 0.00 0.00 0.00 4.01
2556 3730 9.811995 GAGTAACATAGGTAATAACATCACACA 57.188 33.333 0.00 0.00 0.00 3.72
2557 3731 9.257651 GGAGTAACATAGGTAATAACATCACAC 57.742 37.037 0.00 0.00 0.00 3.82
2558 3732 8.426489 GGGAGTAACATAGGTAATAACATCACA 58.574 37.037 0.00 0.00 0.00 3.58
2559 3733 8.426489 TGGGAGTAACATAGGTAATAACATCAC 58.574 37.037 0.00 0.00 0.00 3.06
2560 3734 8.426489 GTGGGAGTAACATAGGTAATAACATCA 58.574 37.037 0.00 0.00 0.00 3.07
2561 3735 8.648693 AGTGGGAGTAACATAGGTAATAACATC 58.351 37.037 0.00 0.00 0.00 3.06
2562 3736 8.429641 CAGTGGGAGTAACATAGGTAATAACAT 58.570 37.037 0.00 0.00 0.00 2.71
2563 3737 7.400915 ACAGTGGGAGTAACATAGGTAATAACA 59.599 37.037 0.00 0.00 0.00 2.41
2564 3738 7.789026 ACAGTGGGAGTAACATAGGTAATAAC 58.211 38.462 0.00 0.00 0.00 1.89
2565 3739 7.983166 ACAGTGGGAGTAACATAGGTAATAA 57.017 36.000 0.00 0.00 0.00 1.40
2566 3740 7.727186 CCTACAGTGGGAGTAACATAGGTAATA 59.273 40.741 0.00 0.00 29.97 0.98
2567 3741 6.553852 CCTACAGTGGGAGTAACATAGGTAAT 59.446 42.308 0.00 0.00 29.97 1.89
2568 3742 5.895534 CCTACAGTGGGAGTAACATAGGTAA 59.104 44.000 0.00 0.00 29.97 2.85
2569 3743 5.043881 ACCTACAGTGGGAGTAACATAGGTA 60.044 44.000 10.54 0.00 38.83 3.08
2570 3744 4.264713 ACCTACAGTGGGAGTAACATAGGT 60.265 45.833 10.54 0.00 37.19 3.08
2571 3745 4.287552 ACCTACAGTGGGAGTAACATAGG 58.712 47.826 10.54 0.00 35.92 2.57
2572 3746 6.636562 CTACCTACAGTGGGAGTAACATAG 57.363 45.833 10.54 0.00 33.37 2.23
2580 3754 4.857679 AGTAAGACTACCTACAGTGGGAG 58.142 47.826 10.54 4.88 43.67 4.30
2581 3755 4.942363 AGTAAGACTACCTACAGTGGGA 57.058 45.455 10.54 0.00 0.00 4.37
2582 3756 7.657023 ATTTAGTAAGACTACCTACAGTGGG 57.343 40.000 0.25 0.25 28.93 4.61
2583 3757 9.624373 TCTATTTAGTAAGACTACCTACAGTGG 57.376 37.037 0.00 0.00 28.93 4.00
2598 3772 9.609346 GCCATGACCTTTAACTCTATTTAGTAA 57.391 33.333 0.00 0.00 0.00 2.24
2599 3773 8.989131 AGCCATGACCTTTAACTCTATTTAGTA 58.011 33.333 0.00 0.00 0.00 1.82
2600 3774 7.862675 AGCCATGACCTTTAACTCTATTTAGT 58.137 34.615 0.00 0.00 0.00 2.24
2601 3775 8.738645 AAGCCATGACCTTTAACTCTATTTAG 57.261 34.615 0.00 0.00 0.00 1.85
2602 3776 7.494625 CGAAGCCATGACCTTTAACTCTATTTA 59.505 37.037 0.00 0.00 0.00 1.40
2603 3777 6.316390 CGAAGCCATGACCTTTAACTCTATTT 59.684 38.462 0.00 0.00 0.00 1.40
2604 3778 5.817816 CGAAGCCATGACCTTTAACTCTATT 59.182 40.000 0.00 0.00 0.00 1.73
2634 3808 2.688507 ACGTTGCATGTAGTCCTGAAG 58.311 47.619 0.00 0.00 0.00 3.02
2659 3833 7.728847 AATACTCGCATAATTACATCTGCAA 57.271 32.000 8.95 0.00 34.29 4.08
2661 3835 8.467402 ACTAATACTCGCATAATTACATCTGC 57.533 34.615 0.00 0.00 0.00 4.26
2729 3903 6.890663 TCAGAAAGAAAAACATGCAAACAG 57.109 33.333 0.00 0.00 0.00 3.16
2730 3904 7.846644 ATTCAGAAAGAAAAACATGCAAACA 57.153 28.000 0.00 0.00 40.22 2.83
2731 3905 9.213819 GAAATTCAGAAAGAAAAACATGCAAAC 57.786 29.630 0.00 0.00 40.22 2.93
2735 3909 7.168135 AGTCGAAATTCAGAAAGAAAAACATGC 59.832 33.333 0.00 0.00 40.22 4.06
2883 4058 3.540617 TGTAGCTGCTTCAAAGTCAACA 58.459 40.909 7.79 0.00 0.00 3.33
2885 4060 3.503363 CCATGTAGCTGCTTCAAAGTCAA 59.497 43.478 12.98 0.00 0.00 3.18
2888 4063 3.146104 ACCATGTAGCTGCTTCAAAGT 57.854 42.857 12.98 10.23 0.00 2.66
2897 4072 2.627515 ATGCCAGTACCATGTAGCTG 57.372 50.000 0.00 0.00 0.00 4.24
2902 4077 4.016444 CCTACAAAATGCCAGTACCATGT 58.984 43.478 0.00 0.00 0.00 3.21
2906 4081 1.400494 CGCCTACAAAATGCCAGTACC 59.600 52.381 0.00 0.00 0.00 3.34
2907 4082 2.081462 ACGCCTACAAAATGCCAGTAC 58.919 47.619 0.00 0.00 0.00 2.73
2908 4083 2.080693 CACGCCTACAAAATGCCAGTA 58.919 47.619 0.00 0.00 0.00 2.74
2909 4084 0.881118 CACGCCTACAAAATGCCAGT 59.119 50.000 0.00 0.00 0.00 4.00
2910 4085 0.171007 CCACGCCTACAAAATGCCAG 59.829 55.000 0.00 0.00 0.00 4.85
2911 4086 0.538516 ACCACGCCTACAAAATGCCA 60.539 50.000 0.00 0.00 0.00 4.92
2912 4087 0.601057 AACCACGCCTACAAAATGCC 59.399 50.000 0.00 0.00 0.00 4.40
2913 4088 1.727857 CGAACCACGCCTACAAAATGC 60.728 52.381 0.00 0.00 34.51 3.56
2914 4089 1.135803 CCGAACCACGCCTACAAAATG 60.136 52.381 0.00 0.00 41.07 2.32
2915 4090 1.161843 CCGAACCACGCCTACAAAAT 58.838 50.000 0.00 0.00 41.07 1.82
2916 4091 0.179051 ACCGAACCACGCCTACAAAA 60.179 50.000 0.00 0.00 41.07 2.44
2917 4092 0.179051 AACCGAACCACGCCTACAAA 60.179 50.000 0.00 0.00 41.07 2.83
2918 4093 0.179051 AAACCGAACCACGCCTACAA 60.179 50.000 0.00 0.00 41.07 2.41
2919 4094 0.179051 AAAACCGAACCACGCCTACA 60.179 50.000 0.00 0.00 41.07 2.74
2920 4095 0.946528 AAAAACCGAACCACGCCTAC 59.053 50.000 0.00 0.00 41.07 3.18
2921 4096 1.228533 GAAAAACCGAACCACGCCTA 58.771 50.000 0.00 0.00 41.07 3.93
2922 4097 1.449726 GGAAAAACCGAACCACGCCT 61.450 55.000 0.00 0.00 41.07 5.52
2923 4098 1.008194 GGAAAAACCGAACCACGCC 60.008 57.895 0.00 0.00 41.07 5.68
2924 4099 1.008194 GGGAAAAACCGAACCACGC 60.008 57.895 0.00 0.00 41.07 5.34
2925 4100 0.955905 ATGGGAAAAACCGAACCACG 59.044 50.000 0.00 0.00 40.11 4.94
2926 4101 3.127589 CAAATGGGAAAAACCGAACCAC 58.872 45.455 0.00 0.00 40.11 4.16
2927 4102 2.766828 ACAAATGGGAAAAACCGAACCA 59.233 40.909 0.00 0.00 40.11 3.67
2928 4103 3.069016 AGACAAATGGGAAAAACCGAACC 59.931 43.478 0.00 0.00 40.11 3.62
2929 4104 4.037565 AGAGACAAATGGGAAAAACCGAAC 59.962 41.667 0.00 0.00 40.11 3.95
2930 4105 4.211920 AGAGACAAATGGGAAAAACCGAA 58.788 39.130 0.00 0.00 40.11 4.30
2931 4106 3.827722 AGAGACAAATGGGAAAAACCGA 58.172 40.909 0.00 0.00 40.11 4.69
2932 4107 5.648092 AGATAGAGACAAATGGGAAAAACCG 59.352 40.000 0.00 0.00 40.11 4.44
2933 4108 8.753497 ATAGATAGAGACAAATGGGAAAAACC 57.247 34.615 0.00 0.00 38.08 3.27
2935 4110 8.686334 GCAATAGATAGAGACAAATGGGAAAAA 58.314 33.333 0.00 0.00 0.00 1.94
2936 4111 8.055181 AGCAATAGATAGAGACAAATGGGAAAA 58.945 33.333 0.00 0.00 0.00 2.29
2937 4112 7.500227 CAGCAATAGATAGAGACAAATGGGAAA 59.500 37.037 0.00 0.00 0.00 3.13
2938 4113 6.994496 CAGCAATAGATAGAGACAAATGGGAA 59.006 38.462 0.00 0.00 0.00 3.97
2939 4114 6.464892 CCAGCAATAGATAGAGACAAATGGGA 60.465 42.308 0.00 0.00 0.00 4.37
2940 4115 5.704515 CCAGCAATAGATAGAGACAAATGGG 59.295 44.000 0.00 0.00 0.00 4.00
2941 4116 5.704515 CCCAGCAATAGATAGAGACAAATGG 59.295 44.000 0.00 0.00 0.00 3.16
2942 4117 6.528321 TCCCAGCAATAGATAGAGACAAATG 58.472 40.000 0.00 0.00 0.00 2.32
2943 4118 6.753913 TCCCAGCAATAGATAGAGACAAAT 57.246 37.500 0.00 0.00 0.00 2.32
2944 4119 6.408548 CCTTCCCAGCAATAGATAGAGACAAA 60.409 42.308 0.00 0.00 0.00 2.83
2945 4120 5.070981 CCTTCCCAGCAATAGATAGAGACAA 59.929 44.000 0.00 0.00 0.00 3.18
2946 4121 4.590647 CCTTCCCAGCAATAGATAGAGACA 59.409 45.833 0.00 0.00 0.00 3.41
2947 4122 4.591072 ACCTTCCCAGCAATAGATAGAGAC 59.409 45.833 0.00 0.00 0.00 3.36
2948 4123 4.820775 ACCTTCCCAGCAATAGATAGAGA 58.179 43.478 0.00 0.00 0.00 3.10
2949 4124 6.865834 ATACCTTCCCAGCAATAGATAGAG 57.134 41.667 0.00 0.00 0.00 2.43
2950 4125 8.122481 TCATATACCTTCCCAGCAATAGATAGA 58.878 37.037 0.00 0.00 0.00 1.98
2951 4126 8.311395 TCATATACCTTCCCAGCAATAGATAG 57.689 38.462 0.00 0.00 0.00 2.08
2952 4127 8.679344 TTCATATACCTTCCCAGCAATAGATA 57.321 34.615 0.00 0.00 0.00 1.98
2953 4128 7.574021 TTCATATACCTTCCCAGCAATAGAT 57.426 36.000 0.00 0.00 0.00 1.98
2954 4129 7.292356 TCTTTCATATACCTTCCCAGCAATAGA 59.708 37.037 0.00 0.00 0.00 1.98
2955 4130 7.453393 TCTTTCATATACCTTCCCAGCAATAG 58.547 38.462 0.00 0.00 0.00 1.73
2956 4131 7.387265 TCTTTCATATACCTTCCCAGCAATA 57.613 36.000 0.00 0.00 0.00 1.90
2957 4132 6.266131 TCTTTCATATACCTTCCCAGCAAT 57.734 37.500 0.00 0.00 0.00 3.56
2958 4133 5.708736 TCTTTCATATACCTTCCCAGCAA 57.291 39.130 0.00 0.00 0.00 3.91
2959 4134 5.397899 CCTTCTTTCATATACCTTCCCAGCA 60.398 44.000 0.00 0.00 0.00 4.41
2960 4135 5.066593 CCTTCTTTCATATACCTTCCCAGC 58.933 45.833 0.00 0.00 0.00 4.85
2961 4136 6.253946 ACCTTCTTTCATATACCTTCCCAG 57.746 41.667 0.00 0.00 0.00 4.45
2962 4137 7.571025 GTTACCTTCTTTCATATACCTTCCCA 58.429 38.462 0.00 0.00 0.00 4.37
2963 4138 6.704937 CGTTACCTTCTTTCATATACCTTCCC 59.295 42.308 0.00 0.00 0.00 3.97
2964 4139 7.495055 TCGTTACCTTCTTTCATATACCTTCC 58.505 38.462 0.00 0.00 0.00 3.46
2965 4140 8.937634 TTCGTTACCTTCTTTCATATACCTTC 57.062 34.615 0.00 0.00 0.00 3.46
2966 4141 9.729281 TTTTCGTTACCTTCTTTCATATACCTT 57.271 29.630 0.00 0.00 0.00 3.50
2967 4142 9.379791 CTTTTCGTTACCTTCTTTCATATACCT 57.620 33.333 0.00 0.00 0.00 3.08
2968 4143 9.159364 ACTTTTCGTTACCTTCTTTCATATACC 57.841 33.333 0.00 0.00 0.00 2.73
2969 4144 9.968743 CACTTTTCGTTACCTTCTTTCATATAC 57.031 33.333 0.00 0.00 0.00 1.47
2970 4145 9.158233 CCACTTTTCGTTACCTTCTTTCATATA 57.842 33.333 0.00 0.00 0.00 0.86
2971 4146 7.881232 TCCACTTTTCGTTACCTTCTTTCATAT 59.119 33.333 0.00 0.00 0.00 1.78
2972 4147 7.218614 TCCACTTTTCGTTACCTTCTTTCATA 58.781 34.615 0.00 0.00 0.00 2.15
2973 4148 6.059484 TCCACTTTTCGTTACCTTCTTTCAT 58.941 36.000 0.00 0.00 0.00 2.57
2974 4149 5.430007 TCCACTTTTCGTTACCTTCTTTCA 58.570 37.500 0.00 0.00 0.00 2.69
2975 4150 5.996669 TCCACTTTTCGTTACCTTCTTTC 57.003 39.130 0.00 0.00 0.00 2.62
2976 4151 5.178809 CGATCCACTTTTCGTTACCTTCTTT 59.821 40.000 0.00 0.00 0.00 2.52
2977 4152 4.689345 CGATCCACTTTTCGTTACCTTCTT 59.311 41.667 0.00 0.00 0.00 2.52
2978 4153 4.021719 TCGATCCACTTTTCGTTACCTTCT 60.022 41.667 0.00 0.00 36.74 2.85
2979 4154 4.240096 TCGATCCACTTTTCGTTACCTTC 58.760 43.478 0.00 0.00 36.74 3.46
2980 4155 4.243270 CTCGATCCACTTTTCGTTACCTT 58.757 43.478 0.00 0.00 36.74 3.50
2981 4156 3.368116 CCTCGATCCACTTTTCGTTACCT 60.368 47.826 0.00 0.00 36.74 3.08
2982 4157 2.928116 CCTCGATCCACTTTTCGTTACC 59.072 50.000 0.00 0.00 36.74 2.85
2983 4158 3.841643 TCCTCGATCCACTTTTCGTTAC 58.158 45.455 0.00 0.00 36.74 2.50
2984 4159 4.524316 TTCCTCGATCCACTTTTCGTTA 57.476 40.909 0.00 0.00 36.74 3.18
2985 4160 3.396260 TTCCTCGATCCACTTTTCGTT 57.604 42.857 0.00 0.00 36.74 3.85
2986 4161 3.611766 ATTCCTCGATCCACTTTTCGT 57.388 42.857 0.00 0.00 36.74 3.85
2987 4162 6.417191 TTTTATTCCTCGATCCACTTTTCG 57.583 37.500 0.00 0.00 36.72 3.46
2988 4163 6.094186 AGCTTTTATTCCTCGATCCACTTTTC 59.906 38.462 0.00 0.00 0.00 2.29
2989 4164 5.946377 AGCTTTTATTCCTCGATCCACTTTT 59.054 36.000 0.00 0.00 0.00 2.27
2990 4165 5.501156 AGCTTTTATTCCTCGATCCACTTT 58.499 37.500 0.00 0.00 0.00 2.66
2991 4166 5.104259 AGCTTTTATTCCTCGATCCACTT 57.896 39.130 0.00 0.00 0.00 3.16
2992 4167 4.698575 GAGCTTTTATTCCTCGATCCACT 58.301 43.478 0.00 0.00 0.00 4.00
3000 4175 6.369065 TCTTTGTCTTCGAGCTTTTATTCCTC 59.631 38.462 0.00 0.00 0.00 3.71
3001 4176 6.231211 TCTTTGTCTTCGAGCTTTTATTCCT 58.769 36.000 0.00 0.00 0.00 3.36
3002 4177 6.369065 TCTCTTTGTCTTCGAGCTTTTATTCC 59.631 38.462 0.00 0.00 0.00 3.01
3003 4178 7.352719 TCTCTTTGTCTTCGAGCTTTTATTC 57.647 36.000 0.00 0.00 0.00 1.75
3004 4179 7.442666 AGTTCTCTTTGTCTTCGAGCTTTTATT 59.557 33.333 0.00 0.00 0.00 1.40
3005 4180 6.931840 AGTTCTCTTTGTCTTCGAGCTTTTAT 59.068 34.615 0.00 0.00 0.00 1.40
3006 4181 6.281405 AGTTCTCTTTGTCTTCGAGCTTTTA 58.719 36.000 0.00 0.00 0.00 1.52
3007 4182 5.119694 AGTTCTCTTTGTCTTCGAGCTTTT 58.880 37.500 0.00 0.00 0.00 2.27
3008 4183 4.698575 AGTTCTCTTTGTCTTCGAGCTTT 58.301 39.130 0.00 0.00 0.00 3.51
3009 4184 4.329462 AGTTCTCTTTGTCTTCGAGCTT 57.671 40.909 0.00 0.00 0.00 3.74
3010 4185 4.038642 AGAAGTTCTCTTTGTCTTCGAGCT 59.961 41.667 0.00 0.00 40.49 4.09
3011 4186 4.303282 AGAAGTTCTCTTTGTCTTCGAGC 58.697 43.478 0.00 0.00 40.49 5.03
3012 4187 4.920927 GGAGAAGTTCTCTTTGTCTTCGAG 59.079 45.833 27.68 0.00 42.95 4.04
3013 4188 4.556898 CGGAGAAGTTCTCTTTGTCTTCGA 60.557 45.833 27.68 0.00 42.95 3.71
3014 4189 3.670991 CGGAGAAGTTCTCTTTGTCTTCG 59.329 47.826 27.68 17.74 42.95 3.79
3015 4190 3.991121 CCGGAGAAGTTCTCTTTGTCTTC 59.009 47.826 27.68 11.06 42.95 2.87
3016 4191 3.244249 CCCGGAGAAGTTCTCTTTGTCTT 60.244 47.826 27.68 0.00 42.95 3.01
3017 4192 2.300437 CCCGGAGAAGTTCTCTTTGTCT 59.700 50.000 27.68 0.00 42.95 3.41
3018 4193 2.037381 ACCCGGAGAAGTTCTCTTTGTC 59.963 50.000 27.68 12.95 42.95 3.18
3019 4194 2.047830 ACCCGGAGAAGTTCTCTTTGT 58.952 47.619 27.68 19.48 42.95 2.83
3020 4195 2.841442 ACCCGGAGAAGTTCTCTTTG 57.159 50.000 27.68 18.95 42.95 2.77
3021 4196 3.902467 ACTAACCCGGAGAAGTTCTCTTT 59.098 43.478 27.68 18.54 42.95 2.52
3022 4197 3.258622 CACTAACCCGGAGAAGTTCTCTT 59.741 47.826 27.68 18.09 42.95 2.85
3023 4198 2.826725 CACTAACCCGGAGAAGTTCTCT 59.173 50.000 27.68 13.41 42.95 3.10
3024 4199 2.094130 CCACTAACCCGGAGAAGTTCTC 60.094 54.545 22.47 22.47 42.66 2.87
3025 4200 1.900486 CCACTAACCCGGAGAAGTTCT 59.100 52.381 4.68 4.68 0.00 3.01
3026 4201 1.897802 TCCACTAACCCGGAGAAGTTC 59.102 52.381 0.73 0.00 0.00 3.01
3027 4202 2.019807 TCCACTAACCCGGAGAAGTT 57.980 50.000 0.73 0.00 0.00 2.66
3028 4203 3.780307 TCCACTAACCCGGAGAAGT 57.220 52.632 0.73 0.00 0.00 3.01
3033 4208 2.674958 GGTTCTCCACTAACCCGGA 58.325 57.895 0.73 0.00 40.49 5.14
3044 4219 2.112898 CATGCTGCATGGGTTCTCC 58.887 57.895 30.12 0.00 38.11 3.71
3052 4227 0.382158 CAGAGAAGCCATGCTGCATG 59.618 55.000 30.65 30.65 39.62 4.06
3053 4228 0.255033 TCAGAGAAGCCATGCTGCAT 59.745 50.000 9.81 9.81 39.62 3.96
3054 4229 0.675837 GTCAGAGAAGCCATGCTGCA 60.676 55.000 4.13 4.13 39.62 4.41
3055 4230 1.703438 CGTCAGAGAAGCCATGCTGC 61.703 60.000 0.00 0.00 39.62 5.25
3056 4231 0.108472 TCGTCAGAGAAGCCATGCTG 60.108 55.000 0.00 0.00 39.62 4.41
3057 4232 2.280835 TCGTCAGAGAAGCCATGCT 58.719 52.632 0.00 0.00 42.56 3.79
3058 4233 4.919653 TCGTCAGAGAAGCCATGC 57.080 55.556 0.00 0.00 0.00 4.06
3060 4235 3.171862 CCTGCTCGTCAGAGAAGCCAT 62.172 57.143 8.59 0.00 46.75 4.40
3061 4236 1.881903 CCTGCTCGTCAGAGAAGCCA 61.882 60.000 8.59 0.00 46.75 4.75
3062 4237 1.153667 CCTGCTCGTCAGAGAAGCC 60.154 63.158 8.59 0.00 46.75 4.35
3063 4238 0.244994 TTCCTGCTCGTCAGAGAAGC 59.755 55.000 8.59 0.00 46.75 3.86
3067 4242 1.153667 GGCTTCCTGCTCGTCAGAG 60.154 63.158 8.59 0.00 45.72 3.35
3068 4243 1.908299 TGGCTTCCTGCTCGTCAGA 60.908 57.895 8.59 0.00 45.72 3.27
3069 4244 1.739562 GTGGCTTCCTGCTCGTCAG 60.740 63.158 1.40 1.40 42.39 3.51
3070 4245 2.038814 TTGTGGCTTCCTGCTCGTCA 62.039 55.000 0.00 0.00 42.39 4.35
3071 4246 0.884704 TTTGTGGCTTCCTGCTCGTC 60.885 55.000 0.00 0.00 42.39 4.20
3072 4247 0.465460 TTTTGTGGCTTCCTGCTCGT 60.465 50.000 0.00 0.00 42.39 4.18
3073 4248 0.667993 TTTTTGTGGCTTCCTGCTCG 59.332 50.000 0.00 0.00 42.39 5.03
3074 4249 1.603931 GCTTTTTGTGGCTTCCTGCTC 60.604 52.381 0.00 0.00 42.39 4.26
3075 4250 0.390492 GCTTTTTGTGGCTTCCTGCT 59.610 50.000 0.00 0.00 42.39 4.24
3076 4251 0.104671 TGCTTTTTGTGGCTTCCTGC 59.895 50.000 0.00 0.00 41.94 4.85
3077 4252 2.600470 TTGCTTTTTGTGGCTTCCTG 57.400 45.000 0.00 0.00 0.00 3.86
3078 4253 2.435437 ACATTGCTTTTTGTGGCTTCCT 59.565 40.909 0.00 0.00 0.00 3.36
3079 4254 2.837498 ACATTGCTTTTTGTGGCTTCC 58.163 42.857 0.00 0.00 0.00 3.46
3080 4255 4.620982 AGTACATTGCTTTTTGTGGCTTC 58.379 39.130 0.00 0.00 0.00 3.86
3081 4256 4.670896 AGTACATTGCTTTTTGTGGCTT 57.329 36.364 0.00 0.00 0.00 4.35
3082 4257 5.982890 ATAGTACATTGCTTTTTGTGGCT 57.017 34.783 0.00 0.00 0.00 4.75
3083 4258 5.925969 ACAATAGTACATTGCTTTTTGTGGC 59.074 36.000 14.22 0.00 32.55 5.01
3084 4259 8.911662 GTTACAATAGTACATTGCTTTTTGTGG 58.088 33.333 14.22 0.00 32.55 4.17
3085 4260 9.677567 AGTTACAATAGTACATTGCTTTTTGTG 57.322 29.630 14.22 0.00 32.55 3.33
3086 4261 9.677567 CAGTTACAATAGTACATTGCTTTTTGT 57.322 29.630 14.22 5.30 32.55 2.83
3087 4262 9.891828 TCAGTTACAATAGTACATTGCTTTTTG 57.108 29.630 14.22 9.11 32.55 2.44
3125 4300 0.796312 TCAGAATTCGGCAACTTCGC 59.204 50.000 0.10 0.00 0.00 4.70
3126 4301 3.536158 TTTCAGAATTCGGCAACTTCG 57.464 42.857 0.10 0.00 0.00 3.79
3127 4302 4.853743 GTGATTTCAGAATTCGGCAACTTC 59.146 41.667 0.10 0.00 0.00 3.01
3128 4303 4.520492 AGTGATTTCAGAATTCGGCAACTT 59.480 37.500 0.10 0.00 0.00 2.66
3129 4304 4.074970 AGTGATTTCAGAATTCGGCAACT 58.925 39.130 0.10 0.00 0.00 3.16
3130 4305 4.425577 AGTGATTTCAGAATTCGGCAAC 57.574 40.909 0.10 0.00 0.00 4.17
3131 4306 5.000591 TGTAGTGATTTCAGAATTCGGCAA 58.999 37.500 0.10 0.00 0.00 4.52
3132 4307 4.574892 TGTAGTGATTTCAGAATTCGGCA 58.425 39.130 0.10 0.00 0.00 5.69
3133 4308 4.034510 CCTGTAGTGATTTCAGAATTCGGC 59.965 45.833 0.10 0.00 0.00 5.54
3134 4309 4.034510 GCCTGTAGTGATTTCAGAATTCGG 59.965 45.833 0.00 0.00 0.00 4.30
3135 4310 4.631377 TGCCTGTAGTGATTTCAGAATTCG 59.369 41.667 0.00 0.00 0.00 3.34
3136 4311 6.690194 ATGCCTGTAGTGATTTCAGAATTC 57.310 37.500 0.00 0.00 0.00 2.17
3137 4312 6.435277 ACAATGCCTGTAGTGATTTCAGAATT 59.565 34.615 0.00 0.00 36.10 2.17
3138 4313 5.948162 ACAATGCCTGTAGTGATTTCAGAAT 59.052 36.000 0.00 0.00 36.10 2.40
3139 4314 5.181811 CACAATGCCTGTAGTGATTTCAGAA 59.818 40.000 0.00 0.00 36.10 3.02
3140 4315 4.696877 CACAATGCCTGTAGTGATTTCAGA 59.303 41.667 0.00 0.00 36.10 3.27
3141 4316 4.673580 GCACAATGCCTGTAGTGATTTCAG 60.674 45.833 0.00 0.00 37.42 3.02
3142 4317 3.191162 GCACAATGCCTGTAGTGATTTCA 59.809 43.478 0.00 0.00 37.42 2.69
3143 4318 3.191162 TGCACAATGCCTGTAGTGATTTC 59.809 43.478 0.00 0.00 44.23 2.17
3144 4319 3.156293 TGCACAATGCCTGTAGTGATTT 58.844 40.909 0.00 0.00 44.23 2.17
3145 4320 2.751259 CTGCACAATGCCTGTAGTGATT 59.249 45.455 0.00 0.00 44.23 2.57
3146 4321 2.026915 TCTGCACAATGCCTGTAGTGAT 60.027 45.455 0.00 0.00 44.23 3.06
3147 4322 1.347378 TCTGCACAATGCCTGTAGTGA 59.653 47.619 0.00 0.00 44.23 3.41
3148 4323 1.812235 TCTGCACAATGCCTGTAGTG 58.188 50.000 0.00 0.00 44.23 2.74
3149 4324 2.566833 TTCTGCACAATGCCTGTAGT 57.433 45.000 0.00 0.00 44.23 2.73
3150 4325 3.921119 TTTTCTGCACAATGCCTGTAG 57.079 42.857 0.00 0.00 44.23 2.74
3151 4326 4.039004 ACAATTTTCTGCACAATGCCTGTA 59.961 37.500 0.00 0.00 44.23 2.74
3152 4327 3.181463 ACAATTTTCTGCACAATGCCTGT 60.181 39.130 0.00 0.00 44.23 4.00
3153 4328 3.395639 ACAATTTTCTGCACAATGCCTG 58.604 40.909 0.00 0.00 44.23 4.85
3154 4329 3.656559 GACAATTTTCTGCACAATGCCT 58.343 40.909 0.00 0.00 44.23 4.75
3155 4330 2.409378 CGACAATTTTCTGCACAATGCC 59.591 45.455 0.00 0.00 44.23 4.40
3156 4331 2.409378 CCGACAATTTTCTGCACAATGC 59.591 45.455 0.00 0.00 45.29 3.56
3157 4332 2.409378 GCCGACAATTTTCTGCACAATG 59.591 45.455 3.45 0.00 0.00 2.82
3158 4333 2.610232 GGCCGACAATTTTCTGCACAAT 60.610 45.455 9.74 0.00 0.00 2.71
3159 4334 1.269517 GGCCGACAATTTTCTGCACAA 60.270 47.619 9.74 0.00 0.00 3.33
3160 4335 0.313672 GGCCGACAATTTTCTGCACA 59.686 50.000 9.74 0.00 0.00 4.57
3161 4336 0.388520 GGGCCGACAATTTTCTGCAC 60.389 55.000 9.74 2.71 0.00 4.57
3162 4337 0.539438 AGGGCCGACAATTTTCTGCA 60.539 50.000 9.74 0.00 0.00 4.41
3163 4338 1.459450 TAGGGCCGACAATTTTCTGC 58.541 50.000 0.00 0.00 0.00 4.26
3164 4339 4.513198 TTTTAGGGCCGACAATTTTCTG 57.487 40.909 0.00 0.00 0.00 3.02
3165 4340 4.557895 CGTTTTTAGGGCCGACAATTTTCT 60.558 41.667 0.00 0.00 0.00 2.52
3166 4341 3.671459 CGTTTTTAGGGCCGACAATTTTC 59.329 43.478 0.00 0.00 0.00 2.29
3167 4342 3.318557 TCGTTTTTAGGGCCGACAATTTT 59.681 39.130 0.00 0.00 0.00 1.82
3168 4343 2.885894 TCGTTTTTAGGGCCGACAATTT 59.114 40.909 0.00 0.00 0.00 1.82
3169 4344 2.506444 TCGTTTTTAGGGCCGACAATT 58.494 42.857 0.00 0.00 0.00 2.32
3170 4345 2.188062 TCGTTTTTAGGGCCGACAAT 57.812 45.000 0.00 0.00 0.00 2.71
3171 4346 1.807742 CATCGTTTTTAGGGCCGACAA 59.192 47.619 0.00 0.00 31.43 3.18
3172 4347 1.270947 ACATCGTTTTTAGGGCCGACA 60.271 47.619 0.00 0.00 31.43 4.35
3173 4348 1.129811 CACATCGTTTTTAGGGCCGAC 59.870 52.381 0.00 0.00 31.43 4.79
3174 4349 1.270947 ACACATCGTTTTTAGGGCCGA 60.271 47.619 0.00 0.00 0.00 5.54
3175 4350 1.129811 GACACATCGTTTTTAGGGCCG 59.870 52.381 0.00 0.00 0.00 6.13
3176 4351 1.471287 GGACACATCGTTTTTAGGGCC 59.529 52.381 0.00 0.00 0.00 5.80
3177 4352 1.471287 GGGACACATCGTTTTTAGGGC 59.529 52.381 0.00 0.00 0.00 5.19
3178 4353 2.089201 GGGGACACATCGTTTTTAGGG 58.911 52.381 0.00 0.00 0.00 3.53
3179 4354 2.785562 TGGGGACACATCGTTTTTAGG 58.214 47.619 0.00 0.00 33.40 2.69
3183 4358 9.148509 AAAATGATCATGGGGACACATCGTTTT 62.149 37.037 9.46 12.17 45.85 2.43
3184 4359 7.755688 AAAATGATCATGGGGACACATCGTTT 61.756 38.462 9.46 0.00 45.40 3.60
3193 4368 5.277974 CGTGATGTAAAATGATCATGGGGAC 60.278 44.000 9.46 6.20 33.62 4.46
3194 4369 4.821260 CGTGATGTAAAATGATCATGGGGA 59.179 41.667 9.46 0.00 33.62 4.81
3195 4370 4.821260 TCGTGATGTAAAATGATCATGGGG 59.179 41.667 9.46 0.00 36.59 4.96
3196 4371 6.564709 ATCGTGATGTAAAATGATCATGGG 57.435 37.500 9.46 0.00 36.59 4.00
3197 4372 9.159364 AGATATCGTGATGTAAAATGATCATGG 57.841 33.333 9.46 0.00 36.59 3.66
3209 4384 9.562408 ACTAGAAGAGAAAGATATCGTGATGTA 57.438 33.333 0.00 0.00 0.00 2.29
3210 4385 8.458573 ACTAGAAGAGAAAGATATCGTGATGT 57.541 34.615 0.00 0.00 0.00 3.06
3214 4389 9.123709 GCATAACTAGAAGAGAAAGATATCGTG 57.876 37.037 0.00 0.00 0.00 4.35
3215 4390 8.851145 TGCATAACTAGAAGAGAAAGATATCGT 58.149 33.333 0.00 0.00 0.00 3.73
3216 4391 9.853555 ATGCATAACTAGAAGAGAAAGATATCG 57.146 33.333 0.00 0.00 0.00 2.92
3221 4396 9.167311 GGAAAATGCATAACTAGAAGAGAAAGA 57.833 33.333 0.00 0.00 0.00 2.52
3222 4397 8.950210 TGGAAAATGCATAACTAGAAGAGAAAG 58.050 33.333 0.00 0.00 0.00 2.62
3223 4398 8.730680 GTGGAAAATGCATAACTAGAAGAGAAA 58.269 33.333 0.00 0.00 0.00 2.52
3224 4399 8.268850 GTGGAAAATGCATAACTAGAAGAGAA 57.731 34.615 0.00 0.00 0.00 2.87
3225 4400 7.849804 GTGGAAAATGCATAACTAGAAGAGA 57.150 36.000 0.00 0.00 0.00 3.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.