Multiple sequence alignment - TraesCS3D01G197900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G197900 chr3D 100.000 2385 0 0 1 2385 211946182 211948566 0.000000e+00 4405.0
1 TraesCS3D01G197900 chr3D 95.449 813 18 9 109 908 232469375 232470181 0.000000e+00 1279.0
2 TraesCS3D01G197900 chr3D 97.504 641 13 2 1550 2188 232471159 232471798 0.000000e+00 1092.0
3 TraesCS3D01G197900 chr3D 98.000 450 9 0 943 1392 232470711 232471160 0.000000e+00 782.0
4 TraesCS3D01G197900 chr3D 95.580 181 6 2 1388 1566 536788334 536788514 3.000000e-74 289.0
5 TraesCS3D01G197900 chr3D 96.471 170 4 2 1383 1551 571465360 571465528 1.810000e-71 279.0
6 TraesCS3D01G197900 chr3D 95.954 173 5 2 1383 1554 579494960 579494789 1.810000e-71 279.0
7 TraesCS3D01G197900 chr3D 93.820 178 8 3 1390 1566 520636984 520636809 5.050000e-67 265.0
8 TraesCS3D01G197900 chr3D 96.078 51 2 0 892 942 232470589 232470639 1.520000e-12 84.2
9 TraesCS3D01G197900 chr6D 99.211 1394 8 2 1 1392 436510997 436509605 0.000000e+00 2510.0
10 TraesCS3D01G197900 chr6D 99.218 639 5 0 1550 2188 436509606 436508968 0.000000e+00 1153.0
11 TraesCS3D01G197900 chr6D 96.482 199 5 2 2189 2385 258018333 258018531 6.360000e-86 327.0
12 TraesCS3D01G197900 chr6D 98.204 167 2 1 1386 1551 72143442 72143276 8.340000e-75 291.0
13 TraesCS3D01G197900 chr5A 88.354 644 64 7 1552 2188 265958751 265958112 0.000000e+00 763.0
14 TraesCS3D01G197900 chr5A 87.042 355 40 4 288 640 5427631 5427981 1.720000e-106 396.0
15 TraesCS3D01G197900 chr5A 82.216 388 52 13 1018 1391 265959137 265958753 3.830000e-83 318.0
16 TraesCS3D01G197900 chr7D 86.970 637 77 4 1553 2185 602671113 602671747 0.000000e+00 712.0
17 TraesCS3D01G197900 chr7D 84.945 631 82 12 1566 2188 28022673 28022048 5.600000e-176 627.0
18 TraesCS3D01G197900 chr7D 90.437 366 25 3 49 412 366728975 366729332 7.720000e-130 473.0
19 TraesCS3D01G197900 chr7D 98.030 203 2 2 2184 2384 140576590 140576388 3.770000e-93 351.0
20 TraesCS3D01G197900 chr7D 98.485 198 2 1 2189 2385 188497652 188497849 4.880000e-92 348.0
21 TraesCS3D01G197900 chr7D 97.487 199 4 1 2188 2385 520906734 520906536 2.940000e-89 339.0
22 TraesCS3D01G197900 chr7D 80.180 444 82 5 947 1384 28023147 28022704 6.360000e-86 327.0
23 TraesCS3D01G197900 chr7D 96.482 199 6 1 2188 2385 188506242 188506440 6.360000e-86 327.0
24 TraesCS3D01G197900 chr7D 82.216 388 51 14 1018 1391 602670727 602671110 3.830000e-83 318.0
25 TraesCS3D01G197900 chr2A 84.906 636 87 9 1560 2188 189393671 189394304 3.340000e-178 634.0
26 TraesCS3D01G197900 chr2A 84.858 634 89 7 1560 2188 187897781 187898412 1.200000e-177 632.0
27 TraesCS3D01G197900 chr2A 84.906 106 14 1 186 291 361210367 361210470 3.240000e-19 106.0
28 TraesCS3D01G197900 chr2A 92.593 54 3 1 1 53 361206663 361206716 2.540000e-10 76.8
29 TraesCS3D01G197900 chr6B 84.301 637 90 9 1560 2188 340793690 340793056 4.360000e-172 614.0
30 TraesCS3D01G197900 chr6B 79.287 449 55 19 944 1384 224878999 224879417 1.810000e-71 279.0
31 TraesCS3D01G197900 chr6A 84.006 644 90 12 1552 2188 407359096 407358459 7.290000e-170 606.0
32 TraesCS3D01G197900 chr6A 82.895 456 69 8 944 1391 149044225 149044679 3.690000e-108 401.0
33 TraesCS3D01G197900 chr6A 82.274 299 43 9 1102 1391 312700960 312701257 1.420000e-62 250.0
34 TraesCS3D01G197900 chr6A 85.294 68 10 0 834 901 312700665 312700732 1.180000e-08 71.3
35 TraesCS3D01G197900 chr6A 88.889 54 6 0 830 883 149044049 149044102 1.530000e-07 67.6
36 TraesCS3D01G197900 chr3A 86.932 352 41 3 291 640 671349397 671349049 7.990000e-105 390.0
37 TraesCS3D01G197900 chr1D 93.774 257 14 1 161 415 7094660 7094404 3.720000e-103 385.0
38 TraesCS3D01G197900 chr1D 95.652 69 3 0 49 117 7094743 7094675 6.970000e-21 111.0
39 TraesCS3D01G197900 chr2D 97.990 199 3 1 2188 2385 352333123 352332925 6.310000e-91 344.0
40 TraesCS3D01G197900 chr2D 97.980 198 3 1 2189 2385 203167559 203167362 2.270000e-90 342.0
41 TraesCS3D01G197900 chr2D 97.487 199 4 1 2188 2385 352324973 352324775 2.940000e-89 339.0
42 TraesCS3D01G197900 chr2D 97.661 171 3 1 1391 1561 478874132 478874301 2.320000e-75 292.0
43 TraesCS3D01G197900 chr4A 80.225 445 80 7 947 1384 701746165 701745722 6.360000e-86 327.0
44 TraesCS3D01G197900 chr5D 96.465 198 5 2 2189 2385 237766773 237766577 2.290000e-85 326.0
45 TraesCS3D01G197900 chr5D 98.182 165 2 1 1391 1555 476192374 476192537 1.080000e-73 287.0
46 TraesCS3D01G197900 chr4D 79.386 456 61 18 943 1391 12089638 12089209 8.340000e-75 291.0
47 TraesCS3D01G197900 chr4D 87.302 63 8 0 839 901 460301718 460301656 3.290000e-09 73.1
48 TraesCS3D01G197900 chr2B 90.385 208 13 7 1383 1586 659017043 659017247 1.410000e-67 267.0
49 TraesCS3D01G197900 chr5B 90.863 197 14 4 1363 1557 144588530 144588336 6.540000e-66 261.0
50 TraesCS3D01G197900 chr7A 89.623 106 10 1 186 291 88933631 88933735 1.490000e-27 134.0
51 TraesCS3D01G197900 chr7A 92.593 54 3 1 1 53 479838612 479838559 2.540000e-10 76.8
52 TraesCS3D01G197900 chrUn 84.906 106 14 1 186 291 255438890 255438787 3.240000e-19 106.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G197900 chr3D 211946182 211948566 2384 False 4405.0 4405 100.00000 1 2385 1 chr3D.!!$F1 2384
1 TraesCS3D01G197900 chr3D 232469375 232471798 2423 False 809.3 1279 96.75775 109 2188 4 chr3D.!!$F4 2079
2 TraesCS3D01G197900 chr6D 436508968 436510997 2029 True 1831.5 2510 99.21450 1 2188 2 chr6D.!!$R2 2187
3 TraesCS3D01G197900 chr5A 265958112 265959137 1025 True 540.5 763 85.28500 1018 2188 2 chr5A.!!$R1 1170
4 TraesCS3D01G197900 chr7D 602670727 602671747 1020 False 515.0 712 84.59300 1018 2185 2 chr7D.!!$F4 1167
5 TraesCS3D01G197900 chr7D 28022048 28023147 1099 True 477.0 627 82.56250 947 2188 2 chr7D.!!$R3 1241
6 TraesCS3D01G197900 chr2A 189393671 189394304 633 False 634.0 634 84.90600 1560 2188 1 chr2A.!!$F2 628
7 TraesCS3D01G197900 chr2A 187897781 187898412 631 False 632.0 632 84.85800 1560 2188 1 chr2A.!!$F1 628
8 TraesCS3D01G197900 chr6B 340793056 340793690 634 True 614.0 614 84.30100 1560 2188 1 chr6B.!!$R1 628
9 TraesCS3D01G197900 chr6A 407358459 407359096 637 True 606.0 606 84.00600 1552 2188 1 chr6A.!!$R1 636
10 TraesCS3D01G197900 chr6A 149044049 149044679 630 False 234.3 401 85.89200 830 1391 2 chr6A.!!$F1 561

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
34 35 4.61892 AGATACGGGAAAGTGAACAGTT 57.381 40.909 0.0 0.0 0.0 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1488 2013 3.56843 CACTATGGACTACATACGGAGCA 59.432 47.826 0.0 0.0 41.03 4.26 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 4.618920 AGATACGGGAAAGTGAACAGTT 57.381 40.909 0.00 0.00 0.00 3.16
1396 1921 8.903820 ACTTTTATGCAATAGACAAATACTCCC 58.096 33.333 0.00 0.00 0.00 4.30
1397 1922 9.125026 CTTTTATGCAATAGACAAATACTCCCT 57.875 33.333 0.00 0.00 0.00 4.20
1398 1923 8.677148 TTTATGCAATAGACAAATACTCCCTC 57.323 34.615 0.00 0.00 0.00 4.30
1399 1924 5.036117 TGCAATAGACAAATACTCCCTCC 57.964 43.478 0.00 0.00 0.00 4.30
1400 1925 4.058817 GCAATAGACAAATACTCCCTCCG 58.941 47.826 0.00 0.00 0.00 4.63
1401 1926 4.443034 GCAATAGACAAATACTCCCTCCGT 60.443 45.833 0.00 0.00 0.00 4.69
1402 1927 5.671493 CAATAGACAAATACTCCCTCCGTT 58.329 41.667 0.00 0.00 0.00 4.44
1403 1928 5.952347 ATAGACAAATACTCCCTCCGTTT 57.048 39.130 0.00 0.00 0.00 3.60
1404 1929 4.203654 AGACAAATACTCCCTCCGTTTC 57.796 45.455 0.00 0.00 0.00 2.78
1405 1930 3.838903 AGACAAATACTCCCTCCGTTTCT 59.161 43.478 0.00 0.00 0.00 2.52
1406 1931 5.021458 AGACAAATACTCCCTCCGTTTCTA 58.979 41.667 0.00 0.00 0.00 2.10
1407 1932 5.482878 AGACAAATACTCCCTCCGTTTCTAA 59.517 40.000 0.00 0.00 0.00 2.10
1408 1933 6.013984 AGACAAATACTCCCTCCGTTTCTAAA 60.014 38.462 0.00 0.00 0.00 1.85
1409 1934 6.718294 ACAAATACTCCCTCCGTTTCTAAAT 58.282 36.000 0.00 0.00 0.00 1.40
1410 1935 7.854337 ACAAATACTCCCTCCGTTTCTAAATA 58.146 34.615 0.00 0.00 0.00 1.40
1411 1936 8.491958 ACAAATACTCCCTCCGTTTCTAAATAT 58.508 33.333 0.00 0.00 0.00 1.28
1412 1937 9.991906 CAAATACTCCCTCCGTTTCTAAATATA 57.008 33.333 0.00 0.00 0.00 0.86
1415 1940 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
1416 1941 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
1417 1942 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
1418 1943 8.315220 TCCCTCCGTTTCTAAATATAAGTCTT 57.685 34.615 0.00 0.00 0.00 3.01
1419 1944 8.765517 TCCCTCCGTTTCTAAATATAAGTCTTT 58.234 33.333 0.00 0.00 0.00 2.52
1420 1945 8.827677 CCCTCCGTTTCTAAATATAAGTCTTTG 58.172 37.037 0.00 0.00 0.00 2.77
1421 1946 9.379791 CCTCCGTTTCTAAATATAAGTCTTTGT 57.620 33.333 0.00 0.00 0.00 2.83
1439 1964 9.646427 AGTCTTTGTAGAGATTTCACTATGAAC 57.354 33.333 0.00 0.00 35.89 3.18
1440 1965 8.874816 GTCTTTGTAGAGATTTCACTATGAACC 58.125 37.037 0.00 0.00 35.89 3.62
1441 1966 8.593679 TCTTTGTAGAGATTTCACTATGAACCA 58.406 33.333 0.00 0.00 35.89 3.67
1442 1967 8.547967 TTTGTAGAGATTTCACTATGAACCAC 57.452 34.615 0.00 0.00 35.89 4.16
1443 1968 7.239763 TGTAGAGATTTCACTATGAACCACA 57.760 36.000 0.00 0.00 35.89 4.17
1444 1969 7.851228 TGTAGAGATTTCACTATGAACCACAT 58.149 34.615 0.00 0.00 35.89 3.21
1445 1970 8.977412 TGTAGAGATTTCACTATGAACCACATA 58.023 33.333 0.00 0.00 35.89 2.29
1446 1971 9.250624 GTAGAGATTTCACTATGAACCACATAC 57.749 37.037 0.00 0.00 35.89 2.39
1447 1972 6.980978 AGAGATTTCACTATGAACCACATACG 59.019 38.462 0.00 0.00 35.89 3.06
1448 1973 6.049149 AGATTTCACTATGAACCACATACGG 58.951 40.000 0.00 0.00 35.89 4.02
1449 1974 5.408880 TTTCACTATGAACCACATACGGA 57.591 39.130 0.00 0.00 35.89 4.69
1450 1975 5.607939 TTCACTATGAACCACATACGGAT 57.392 39.130 0.00 0.00 40.07 4.18
1451 1976 4.944048 TCACTATGAACCACATACGGATG 58.056 43.478 5.94 5.94 40.07 3.51
1452 1977 5.105106 TTCACTATGAACCACATACGGATGT 60.105 40.000 7.68 7.68 37.89 3.06
1453 1978 5.595133 TCACTATGAACCACATACGGATGTA 59.405 40.000 14.23 0.00 44.82 2.29
1454 1979 6.266786 TCACTATGAACCACATACGGATGTAT 59.733 38.462 14.23 5.54 44.82 2.29
1455 1980 7.449086 TCACTATGAACCACATACGGATGTATA 59.551 37.037 14.23 6.48 44.82 1.47
1456 1981 8.251026 CACTATGAACCACATACGGATGTATAT 58.749 37.037 14.23 1.68 44.82 0.86
1457 1982 9.470399 ACTATGAACCACATACGGATGTATATA 57.530 33.333 14.23 7.10 44.82 0.86
1458 1983 9.952188 CTATGAACCACATACGGATGTATATAG 57.048 37.037 14.23 12.28 44.82 1.31
1459 1984 8.589701 ATGAACCACATACGGATGTATATAGA 57.410 34.615 14.23 0.00 44.82 1.98
1460 1985 8.589701 TGAACCACATACGGATGTATATAGAT 57.410 34.615 14.23 0.00 44.82 1.98
1461 1986 8.466798 TGAACCACATACGGATGTATATAGATG 58.533 37.037 14.23 0.00 44.82 2.90
1462 1987 6.806751 ACCACATACGGATGTATATAGATGC 58.193 40.000 14.23 0.00 44.82 3.91
1463 1988 6.379988 ACCACATACGGATGTATATAGATGCA 59.620 38.462 14.23 0.00 44.82 3.96
1464 1989 7.069950 ACCACATACGGATGTATATAGATGCAT 59.930 37.037 14.23 0.00 44.82 3.96
1465 1990 7.928167 CCACATACGGATGTATATAGATGCATT 59.072 37.037 14.23 1.23 44.82 3.56
1466 1991 9.317936 CACATACGGATGTATATAGATGCATTT 57.682 33.333 14.23 0.00 44.82 2.32
1467 1992 9.890629 ACATACGGATGTATATAGATGCATTTT 57.109 29.630 12.79 0.00 44.77 1.82
1483 2008 9.323985 AGATGCATTTTAGAAGTAGATTCACTC 57.676 33.333 0.00 0.00 40.67 3.51
1484 2009 9.102757 GATGCATTTTAGAAGTAGATTCACTCA 57.897 33.333 0.00 0.00 40.67 3.41
1485 2010 9.624373 ATGCATTTTAGAAGTAGATTCACTCAT 57.376 29.630 0.00 0.00 40.67 2.90
1486 2011 9.453572 TGCATTTTAGAAGTAGATTCACTCATT 57.546 29.630 0.00 0.00 40.67 2.57
1491 2016 9.507329 TTTAGAAGTAGATTCACTCATTTTGCT 57.493 29.630 0.00 0.00 40.67 3.91
1492 2017 7.608308 AGAAGTAGATTCACTCATTTTGCTC 57.392 36.000 0.00 0.00 40.67 4.26
1493 2018 6.597280 AGAAGTAGATTCACTCATTTTGCTCC 59.403 38.462 0.00 0.00 40.67 4.70
1494 2019 4.872691 AGTAGATTCACTCATTTTGCTCCG 59.127 41.667 0.00 0.00 0.00 4.63
1495 2020 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
1496 2021 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
1497 2022 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
1498 2023 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
1499 2024 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
1500 2025 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
1501 2026 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
1502 2027 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
1503 2028 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
1504 2029 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
1505 2030 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
1506 2031 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
1507 2032 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
1508 2033 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
1509 2034 3.828921 TGCTCCGTATGTAGTCCATAGT 58.171 45.455 0.00 0.00 36.71 2.12
1510 2035 3.568430 TGCTCCGTATGTAGTCCATAGTG 59.432 47.826 0.00 0.00 36.71 2.74
1511 2036 3.819337 GCTCCGTATGTAGTCCATAGTGA 59.181 47.826 0.00 0.00 36.71 3.41
1512 2037 4.277672 GCTCCGTATGTAGTCCATAGTGAA 59.722 45.833 0.00 0.00 36.71 3.18
1513 2038 5.221185 GCTCCGTATGTAGTCCATAGTGAAA 60.221 44.000 0.00 0.00 36.71 2.69
1514 2039 6.140303 TCCGTATGTAGTCCATAGTGAAAC 57.860 41.667 0.00 0.00 36.71 2.78
1515 2040 5.068198 TCCGTATGTAGTCCATAGTGAAACC 59.932 44.000 0.00 0.00 36.71 3.27
1516 2041 5.068723 CCGTATGTAGTCCATAGTGAAACCT 59.931 44.000 0.00 0.00 36.71 3.50
1517 2042 6.207213 CGTATGTAGTCCATAGTGAAACCTC 58.793 44.000 0.00 0.00 36.71 3.85
1518 2043 6.039493 CGTATGTAGTCCATAGTGAAACCTCT 59.961 42.308 0.00 0.00 36.71 3.69
1519 2044 7.228108 CGTATGTAGTCCATAGTGAAACCTCTA 59.772 40.741 0.00 0.00 36.71 2.43
1520 2045 6.770746 TGTAGTCCATAGTGAAACCTCTAC 57.229 41.667 0.00 0.00 37.80 2.59
1521 2046 6.250711 TGTAGTCCATAGTGAAACCTCTACA 58.749 40.000 0.00 0.00 37.80 2.74
1522 2047 6.722590 TGTAGTCCATAGTGAAACCTCTACAA 59.277 38.462 0.00 0.00 37.80 2.41
1523 2048 6.681729 AGTCCATAGTGAAACCTCTACAAA 57.318 37.500 0.00 0.00 37.80 2.83
1524 2049 6.702329 AGTCCATAGTGAAACCTCTACAAAG 58.298 40.000 0.00 0.00 37.80 2.77
1525 2050 6.497259 AGTCCATAGTGAAACCTCTACAAAGA 59.503 38.462 0.00 0.00 37.80 2.52
1526 2051 6.590677 GTCCATAGTGAAACCTCTACAAAGAC 59.409 42.308 0.00 0.00 37.80 3.01
1527 2052 6.497259 TCCATAGTGAAACCTCTACAAAGACT 59.503 38.462 0.00 0.00 37.80 3.24
1528 2053 7.016268 TCCATAGTGAAACCTCTACAAAGACTT 59.984 37.037 0.00 0.00 37.80 3.01
1529 2054 8.311836 CCATAGTGAAACCTCTACAAAGACTTA 58.688 37.037 0.00 0.00 37.80 2.24
1530 2055 9.877178 CATAGTGAAACCTCTACAAAGACTTAT 57.123 33.333 0.00 0.00 37.80 1.73
1544 2069 8.943909 ACAAAGACTTATATTTAGGAACGGAG 57.056 34.615 0.00 0.00 0.00 4.63
1545 2070 7.985752 ACAAAGACTTATATTTAGGAACGGAGG 59.014 37.037 0.00 0.00 0.00 4.30
1546 2071 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
1547 2072 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
1548 2073 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
1880 2423 9.102757 GTATGCTACAAATCAAATCAGAAGAGA 57.897 33.333 0.00 0.00 0.00 3.10
1934 2477 4.256920 CGAGGAACTTCACAATCCTGATT 58.743 43.478 0.00 0.00 43.55 2.57
2118 2664 2.997980 TGAGACTTTGGACAAGCAACA 58.002 42.857 0.00 0.00 0.00 3.33
2188 2734 9.256228 TGGACACTTCTCATTTACTACTCTATT 57.744 33.333 0.00 0.00 0.00 1.73
2189 2735 9.522804 GGACACTTCTCATTTACTACTCTATTG 57.477 37.037 0.00 0.00 0.00 1.90
2195 2741 9.512435 TTCTCATTTACTACTCTATTGTAACGC 57.488 33.333 0.00 0.00 29.68 4.84
2196 2742 8.133627 TCTCATTTACTACTCTATTGTAACGCC 58.866 37.037 0.00 0.00 29.68 5.68
2197 2743 7.205297 TCATTTACTACTCTATTGTAACGCCC 58.795 38.462 0.00 0.00 29.68 6.13
2198 2744 5.520376 TTACTACTCTATTGTAACGCCCC 57.480 43.478 0.00 0.00 0.00 5.80
2199 2745 3.368248 ACTACTCTATTGTAACGCCCCA 58.632 45.455 0.00 0.00 0.00 4.96
2200 2746 3.770933 ACTACTCTATTGTAACGCCCCAA 59.229 43.478 0.00 0.00 0.00 4.12
2201 2747 3.261981 ACTCTATTGTAACGCCCCAAG 57.738 47.619 0.00 0.00 0.00 3.61
2202 2748 2.835764 ACTCTATTGTAACGCCCCAAGA 59.164 45.455 0.00 0.00 0.00 3.02
2203 2749 3.195661 CTCTATTGTAACGCCCCAAGAC 58.804 50.000 0.00 0.00 0.00 3.01
2204 2750 2.093341 TCTATTGTAACGCCCCAAGACC 60.093 50.000 0.00 0.00 0.00 3.85
2205 2751 0.675522 ATTGTAACGCCCCAAGACCG 60.676 55.000 0.00 0.00 0.00 4.79
2206 2752 1.756408 TTGTAACGCCCCAAGACCGA 61.756 55.000 0.00 0.00 0.00 4.69
2207 2753 1.739196 GTAACGCCCCAAGACCGAC 60.739 63.158 0.00 0.00 0.00 4.79
2208 2754 3.285523 TAACGCCCCAAGACCGACG 62.286 63.158 0.00 0.00 0.00 5.12
2211 2757 4.699522 GCCCCAAGACCGACGCTT 62.700 66.667 0.00 0.00 0.00 4.68
2212 2758 2.434359 CCCCAAGACCGACGCTTC 60.434 66.667 0.00 0.00 0.00 3.86
2213 2759 2.342279 CCCAAGACCGACGCTTCA 59.658 61.111 0.00 0.00 0.00 3.02
2214 2760 1.738099 CCCAAGACCGACGCTTCAG 60.738 63.158 0.00 0.00 0.00 3.02
2215 2761 1.289066 CCAAGACCGACGCTTCAGA 59.711 57.895 0.00 0.00 0.00 3.27
2216 2762 0.319555 CCAAGACCGACGCTTCAGAA 60.320 55.000 0.00 0.00 0.00 3.02
2217 2763 1.063806 CAAGACCGACGCTTCAGAAG 58.936 55.000 5.72 5.72 0.00 2.85
2218 2764 0.959553 AAGACCGACGCTTCAGAAGA 59.040 50.000 14.86 0.00 0.00 2.87
2219 2765 1.178276 AGACCGACGCTTCAGAAGAT 58.822 50.000 14.86 0.43 0.00 2.40
2220 2766 1.546476 AGACCGACGCTTCAGAAGATT 59.454 47.619 14.86 0.00 0.00 2.40
2221 2767 2.028930 AGACCGACGCTTCAGAAGATTT 60.029 45.455 14.86 0.00 0.00 2.17
2222 2768 2.338500 ACCGACGCTTCAGAAGATTTC 58.662 47.619 14.86 5.35 0.00 2.17
2223 2769 1.661112 CCGACGCTTCAGAAGATTTCC 59.339 52.381 14.86 0.00 0.00 3.13
2224 2770 2.611518 CGACGCTTCAGAAGATTTCCT 58.388 47.619 14.86 0.00 0.00 3.36
2225 2771 2.996621 CGACGCTTCAGAAGATTTCCTT 59.003 45.455 14.86 0.00 37.93 3.36
2226 2772 4.174009 CGACGCTTCAGAAGATTTCCTTA 58.826 43.478 14.86 0.00 34.68 2.69
2227 2773 4.806247 CGACGCTTCAGAAGATTTCCTTAT 59.194 41.667 14.86 0.00 34.68 1.73
2228 2774 5.292101 CGACGCTTCAGAAGATTTCCTTATT 59.708 40.000 14.86 0.00 34.68 1.40
2229 2775 6.183360 CGACGCTTCAGAAGATTTCCTTATTT 60.183 38.462 14.86 0.00 34.68 1.40
2230 2776 7.454260 ACGCTTCAGAAGATTTCCTTATTTT 57.546 32.000 14.86 0.00 34.68 1.82
2231 2777 7.530863 ACGCTTCAGAAGATTTCCTTATTTTC 58.469 34.615 14.86 0.00 34.68 2.29
2232 2778 6.684555 CGCTTCAGAAGATTTCCTTATTTTCG 59.315 38.462 14.86 0.00 34.68 3.46
2233 2779 7.530863 GCTTCAGAAGATTTCCTTATTTTCGT 58.469 34.615 14.86 0.00 34.68 3.85
2234 2780 7.483059 GCTTCAGAAGATTTCCTTATTTTCGTG 59.517 37.037 14.86 0.00 34.68 4.35
2235 2781 8.615878 TTCAGAAGATTTCCTTATTTTCGTGA 57.384 30.769 0.00 0.00 34.68 4.35
2236 2782 8.792830 TCAGAAGATTTCCTTATTTTCGTGAT 57.207 30.769 0.00 0.00 34.68 3.06
2237 2783 8.883731 TCAGAAGATTTCCTTATTTTCGTGATC 58.116 33.333 0.00 0.00 34.68 2.92
2238 2784 7.848051 CAGAAGATTTCCTTATTTTCGTGATCG 59.152 37.037 0.00 0.00 34.68 3.69
2239 2785 6.049263 AGATTTCCTTATTTTCGTGATCGC 57.951 37.500 0.00 0.00 36.96 4.58
2240 2786 4.609691 TTTCCTTATTTTCGTGATCGCC 57.390 40.909 0.00 0.00 36.96 5.54
2241 2787 2.198406 TCCTTATTTTCGTGATCGCCG 58.802 47.619 0.00 0.00 36.96 6.46
2242 2788 1.931172 CCTTATTTTCGTGATCGCCGT 59.069 47.619 0.00 0.00 36.96 5.68
2243 2789 2.285602 CCTTATTTTCGTGATCGCCGTG 60.286 50.000 0.00 0.00 36.96 4.94
2244 2790 1.999048 TATTTTCGTGATCGCCGTGT 58.001 45.000 0.00 0.00 36.96 4.49
2245 2791 0.442310 ATTTTCGTGATCGCCGTGTG 59.558 50.000 0.00 0.00 36.96 3.82
2246 2792 0.876777 TTTTCGTGATCGCCGTGTGT 60.877 50.000 0.00 0.00 36.96 3.72
2247 2793 0.876777 TTTCGTGATCGCCGTGTGTT 60.877 50.000 0.00 0.00 36.96 3.32
2248 2794 0.876777 TTCGTGATCGCCGTGTGTTT 60.877 50.000 0.00 0.00 36.96 2.83
2249 2795 1.129809 CGTGATCGCCGTGTGTTTC 59.870 57.895 0.00 0.00 0.00 2.78
2250 2796 1.282248 CGTGATCGCCGTGTGTTTCT 61.282 55.000 0.00 0.00 0.00 2.52
2251 2797 0.865769 GTGATCGCCGTGTGTTTCTT 59.134 50.000 0.00 0.00 0.00 2.52
2252 2798 1.263217 GTGATCGCCGTGTGTTTCTTT 59.737 47.619 0.00 0.00 0.00 2.52
2253 2799 1.944024 TGATCGCCGTGTGTTTCTTTT 59.056 42.857 0.00 0.00 0.00 2.27
2254 2800 2.286713 TGATCGCCGTGTGTTTCTTTTG 60.287 45.455 0.00 0.00 0.00 2.44
2255 2801 1.088306 TCGCCGTGTGTTTCTTTTGT 58.912 45.000 0.00 0.00 0.00 2.83
2256 2802 1.187715 CGCCGTGTGTTTCTTTTGTG 58.812 50.000 0.00 0.00 0.00 3.33
2257 2803 0.920664 GCCGTGTGTTTCTTTTGTGC 59.079 50.000 0.00 0.00 0.00 4.57
2258 2804 1.469079 GCCGTGTGTTTCTTTTGTGCT 60.469 47.619 0.00 0.00 0.00 4.40
2259 2805 2.874849 CCGTGTGTTTCTTTTGTGCTT 58.125 42.857 0.00 0.00 0.00 3.91
2260 2806 2.598192 CCGTGTGTTTCTTTTGTGCTTG 59.402 45.455 0.00 0.00 0.00 4.01
2261 2807 2.027926 CGTGTGTTTCTTTTGTGCTTGC 59.972 45.455 0.00 0.00 0.00 4.01
2262 2808 3.253230 GTGTGTTTCTTTTGTGCTTGCT 58.747 40.909 0.00 0.00 0.00 3.91
2263 2809 3.304293 GTGTGTTTCTTTTGTGCTTGCTC 59.696 43.478 0.00 0.00 0.00 4.26
2264 2810 3.193267 TGTGTTTCTTTTGTGCTTGCTCT 59.807 39.130 0.00 0.00 0.00 4.09
2265 2811 4.176271 GTGTTTCTTTTGTGCTTGCTCTT 58.824 39.130 0.00 0.00 0.00 2.85
2266 2812 4.627035 GTGTTTCTTTTGTGCTTGCTCTTT 59.373 37.500 0.00 0.00 0.00 2.52
2267 2813 5.120674 GTGTTTCTTTTGTGCTTGCTCTTTT 59.879 36.000 0.00 0.00 0.00 2.27
2268 2814 6.310224 GTGTTTCTTTTGTGCTTGCTCTTTTA 59.690 34.615 0.00 0.00 0.00 1.52
2269 2815 7.010460 GTGTTTCTTTTGTGCTTGCTCTTTTAT 59.990 33.333 0.00 0.00 0.00 1.40
2270 2816 7.548780 TGTTTCTTTTGTGCTTGCTCTTTTATT 59.451 29.630 0.00 0.00 0.00 1.40
2271 2817 8.390354 GTTTCTTTTGTGCTTGCTCTTTTATTT 58.610 29.630 0.00 0.00 0.00 1.40
2272 2818 8.491331 TTCTTTTGTGCTTGCTCTTTTATTTT 57.509 26.923 0.00 0.00 0.00 1.82
2273 2819 8.491331 TCTTTTGTGCTTGCTCTTTTATTTTT 57.509 26.923 0.00 0.00 0.00 1.94
2274 2820 8.389603 TCTTTTGTGCTTGCTCTTTTATTTTTG 58.610 29.630 0.00 0.00 0.00 2.44
2275 2821 5.655893 TGTGCTTGCTCTTTTATTTTTGC 57.344 34.783 0.00 0.00 0.00 3.68
2276 2822 5.114780 TGTGCTTGCTCTTTTATTTTTGCA 58.885 33.333 0.00 0.00 0.00 4.08
2277 2823 5.759273 TGTGCTTGCTCTTTTATTTTTGCAT 59.241 32.000 0.00 0.00 0.00 3.96
2278 2824 6.260493 TGTGCTTGCTCTTTTATTTTTGCATT 59.740 30.769 0.00 0.00 0.00 3.56
2279 2825 6.575942 GTGCTTGCTCTTTTATTTTTGCATTG 59.424 34.615 0.00 0.00 0.00 2.82
2280 2826 5.566395 GCTTGCTCTTTTATTTTTGCATTGC 59.434 36.000 0.46 0.46 0.00 3.56
2281 2827 6.615264 TTGCTCTTTTATTTTTGCATTGCA 57.385 29.167 7.38 7.38 36.47 4.08
2282 2828 6.804770 TGCTCTTTTATTTTTGCATTGCAT 57.195 29.167 12.95 0.00 38.76 3.96
2283 2829 6.833839 TGCTCTTTTATTTTTGCATTGCATC 58.166 32.000 12.95 0.00 38.76 3.91
2284 2830 6.427242 TGCTCTTTTATTTTTGCATTGCATCA 59.573 30.769 12.95 0.00 38.76 3.07
2285 2831 7.119992 TGCTCTTTTATTTTTGCATTGCATCAT 59.880 29.630 12.95 7.46 38.76 2.45
2286 2832 7.428183 GCTCTTTTATTTTTGCATTGCATCATG 59.572 33.333 12.95 0.00 38.76 3.07
2287 2833 8.325421 TCTTTTATTTTTGCATTGCATCATGT 57.675 26.923 12.95 1.14 38.76 3.21
2288 2834 8.444715 TCTTTTATTTTTGCATTGCATCATGTC 58.555 29.630 12.95 0.00 38.76 3.06
2289 2835 7.668525 TTTATTTTTGCATTGCATCATGTCA 57.331 28.000 12.95 0.00 38.76 3.58
2290 2836 7.851387 TTATTTTTGCATTGCATCATGTCAT 57.149 28.000 12.95 1.42 38.76 3.06
2291 2837 5.788055 TTTTTGCATTGCATCATGTCATC 57.212 34.783 12.95 0.00 38.76 2.92
2292 2838 4.457834 TTTGCATTGCATCATGTCATCA 57.542 36.364 12.95 0.00 38.76 3.07
2293 2839 4.664150 TTGCATTGCATCATGTCATCAT 57.336 36.364 12.95 0.00 38.76 2.45
2294 2840 3.976169 TGCATTGCATCATGTCATCATG 58.024 40.909 7.38 0.00 42.12 3.07
2295 2841 3.798548 TGCATTGCATCATGTCATCATGC 60.799 43.478 14.26 14.26 41.34 4.06
2296 2842 6.817434 TGCATTGCATCATGTCATCATGCC 62.817 45.833 17.82 4.29 41.34 4.40
2337 2883 9.847224 TTTTTAAAACCCACCTAATAAATTGCA 57.153 25.926 0.00 0.00 0.00 4.08
2339 2885 9.442047 TTTAAAACCCACCTAATAAATTGCATG 57.558 29.630 0.00 0.00 0.00 4.06
2340 2886 5.612725 AACCCACCTAATAAATTGCATGG 57.387 39.130 0.00 0.00 0.00 3.66
2341 2887 4.877773 ACCCACCTAATAAATTGCATGGA 58.122 39.130 0.00 0.00 0.00 3.41
2342 2888 5.466819 ACCCACCTAATAAATTGCATGGAT 58.533 37.500 0.00 0.00 0.00 3.41
2343 2889 5.539955 ACCCACCTAATAAATTGCATGGATC 59.460 40.000 0.00 0.00 0.00 3.36
2344 2890 5.776716 CCCACCTAATAAATTGCATGGATCT 59.223 40.000 0.00 0.00 0.00 2.75
2345 2891 6.268387 CCCACCTAATAAATTGCATGGATCTT 59.732 38.462 0.00 0.00 0.00 2.40
2346 2892 7.373493 CCACCTAATAAATTGCATGGATCTTC 58.627 38.462 0.00 0.00 0.00 2.87
2347 2893 7.080099 CACCTAATAAATTGCATGGATCTTCG 58.920 38.462 0.00 0.00 0.00 3.79
2348 2894 6.998074 ACCTAATAAATTGCATGGATCTTCGA 59.002 34.615 0.00 0.00 0.00 3.71
2349 2895 7.667219 ACCTAATAAATTGCATGGATCTTCGAT 59.333 33.333 0.00 0.00 0.00 3.59
2350 2896 8.180267 CCTAATAAATTGCATGGATCTTCGATC 58.820 37.037 0.00 0.00 0.00 3.69
2351 2897 4.843220 AAATTGCATGGATCTTCGATCC 57.157 40.909 14.47 14.47 38.66 3.36
2361 2907 6.785488 TGGATCTTCGATCCATTTAAATCG 57.215 37.500 18.90 0.00 42.81 3.34
2366 2912 4.948341 TCGATCCATTTAAATCGAGGGA 57.052 40.909 7.38 7.33 46.30 4.20
2367 2913 5.284861 TCGATCCATTTAAATCGAGGGAA 57.715 39.130 7.38 0.00 46.30 3.97
2368 2914 5.865085 TCGATCCATTTAAATCGAGGGAAT 58.135 37.500 7.38 0.00 46.30 3.01
2369 2915 6.296026 TCGATCCATTTAAATCGAGGGAATT 58.704 36.000 7.38 0.00 46.30 2.17
2370 2916 6.426937 TCGATCCATTTAAATCGAGGGAATTC 59.573 38.462 7.38 0.00 46.30 2.17
2371 2917 6.204688 CGATCCATTTAAATCGAGGGAATTCA 59.795 38.462 7.93 0.00 45.83 2.57
2372 2918 6.693315 TCCATTTAAATCGAGGGAATTCAC 57.307 37.500 7.93 3.01 0.00 3.18
2373 2919 6.184068 TCCATTTAAATCGAGGGAATTCACA 58.816 36.000 11.02 0.00 0.00 3.58
2374 2920 6.833416 TCCATTTAAATCGAGGGAATTCACAT 59.167 34.615 11.02 0.00 0.00 3.21
2375 2921 6.919662 CCATTTAAATCGAGGGAATTCACATG 59.080 38.462 11.02 1.38 0.00 3.21
2376 2922 6.449635 TTTAAATCGAGGGAATTCACATGG 57.550 37.500 11.02 0.00 0.00 3.66
2377 2923 3.652057 AATCGAGGGAATTCACATGGT 57.348 42.857 11.02 0.00 0.00 3.55
2378 2924 2.401583 TCGAGGGAATTCACATGGTG 57.598 50.000 11.02 0.00 34.45 4.17
2379 2925 1.905894 TCGAGGGAATTCACATGGTGA 59.094 47.619 11.02 0.00 41.09 4.02
2380 2926 2.505407 TCGAGGGAATTCACATGGTGAT 59.495 45.455 11.02 0.00 42.40 3.06
2381 2927 3.054434 TCGAGGGAATTCACATGGTGATT 60.054 43.478 11.02 0.00 42.40 2.57
2382 2928 3.696051 CGAGGGAATTCACATGGTGATTT 59.304 43.478 11.02 3.30 42.40 2.17
2383 2929 4.201950 CGAGGGAATTCACATGGTGATTTC 60.202 45.833 11.02 18.55 44.84 2.17
2384 2930 4.939255 AGGGAATTCACATGGTGATTTCT 58.061 39.130 22.65 9.99 44.89 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 9.778741 GACTGGATATCTAATATTGTGAAACCA 57.221 33.333 2.05 7.07 34.36 3.67
378 381 1.668751 CACAGGTCTCGAGCTCTAGAC 59.331 57.143 30.74 30.74 41.16 2.59
523 527 1.265905 CCTGCACGGTAGTTTTGGAAC 59.734 52.381 0.00 0.00 35.97 3.62
1390 1915 8.773033 ACTTATATTTAGAAACGGAGGGAGTA 57.227 34.615 0.00 0.00 0.00 2.59
1391 1916 7.564292 AGACTTATATTTAGAAACGGAGGGAGT 59.436 37.037 0.00 0.00 0.00 3.85
1392 1917 7.953752 AGACTTATATTTAGAAACGGAGGGAG 58.046 38.462 0.00 0.00 0.00 4.30
1393 1918 7.909485 AGACTTATATTTAGAAACGGAGGGA 57.091 36.000 0.00 0.00 0.00 4.20
1394 1919 8.827677 CAAAGACTTATATTTAGAAACGGAGGG 58.172 37.037 0.00 0.00 0.00 4.30
1395 1920 9.379791 ACAAAGACTTATATTTAGAAACGGAGG 57.620 33.333 0.00 0.00 0.00 4.30
1413 1938 9.646427 GTTCATAGTGAAATCTCTACAAAGACT 57.354 33.333 0.00 0.00 38.22 3.24
1414 1939 8.874816 GGTTCATAGTGAAATCTCTACAAAGAC 58.125 37.037 0.00 0.00 38.22 3.01
1415 1940 8.593679 TGGTTCATAGTGAAATCTCTACAAAGA 58.406 33.333 0.00 0.00 38.22 2.52
1416 1941 8.660373 GTGGTTCATAGTGAAATCTCTACAAAG 58.340 37.037 0.00 0.00 38.22 2.77
1417 1942 8.154203 TGTGGTTCATAGTGAAATCTCTACAAA 58.846 33.333 0.00 0.00 38.22 2.83
1418 1943 7.676004 TGTGGTTCATAGTGAAATCTCTACAA 58.324 34.615 0.00 0.00 38.22 2.41
1419 1944 7.239763 TGTGGTTCATAGTGAAATCTCTACA 57.760 36.000 0.00 0.00 38.22 2.74
1420 1945 9.250624 GTATGTGGTTCATAGTGAAATCTCTAC 57.749 37.037 0.00 0.00 38.22 2.59
1421 1946 8.135529 CGTATGTGGTTCATAGTGAAATCTCTA 58.864 37.037 0.00 0.00 38.22 2.43
1422 1947 6.980978 CGTATGTGGTTCATAGTGAAATCTCT 59.019 38.462 0.00 0.00 38.22 3.10
1423 1948 6.201044 CCGTATGTGGTTCATAGTGAAATCTC 59.799 42.308 0.00 0.00 38.22 2.75
1424 1949 6.049149 CCGTATGTGGTTCATAGTGAAATCT 58.951 40.000 0.00 0.00 38.22 2.40
1425 1950 6.046593 TCCGTATGTGGTTCATAGTGAAATC 58.953 40.000 0.00 0.00 38.22 2.17
1426 1951 5.984725 TCCGTATGTGGTTCATAGTGAAAT 58.015 37.500 0.00 0.00 38.22 2.17
1427 1952 5.408880 TCCGTATGTGGTTCATAGTGAAA 57.591 39.130 0.00 0.00 38.22 2.69
1428 1953 5.105106 ACATCCGTATGTGGTTCATAGTGAA 60.105 40.000 0.00 0.00 44.79 3.18
1429 1954 4.404394 ACATCCGTATGTGGTTCATAGTGA 59.596 41.667 0.00 0.00 44.79 3.41
1430 1955 4.693283 ACATCCGTATGTGGTTCATAGTG 58.307 43.478 0.00 0.00 44.79 2.74
1431 1956 6.665992 ATACATCCGTATGTGGTTCATAGT 57.334 37.500 3.56 0.00 45.99 2.12
1432 1957 9.952188 CTATATACATCCGTATGTGGTTCATAG 57.048 37.037 3.56 0.80 45.99 2.23
1433 1958 9.689501 TCTATATACATCCGTATGTGGTTCATA 57.310 33.333 3.56 0.00 45.99 2.15
1434 1959 8.589701 TCTATATACATCCGTATGTGGTTCAT 57.410 34.615 3.56 0.00 45.99 2.57
1435 1960 8.466798 CATCTATATACATCCGTATGTGGTTCA 58.533 37.037 3.56 0.00 45.99 3.18
1436 1961 7.435488 GCATCTATATACATCCGTATGTGGTTC 59.565 40.741 3.56 0.00 45.99 3.62
1437 1962 7.093509 TGCATCTATATACATCCGTATGTGGTT 60.094 37.037 3.56 0.00 45.99 3.67
1438 1963 6.379988 TGCATCTATATACATCCGTATGTGGT 59.620 38.462 3.56 0.00 45.99 4.16
1439 1964 6.805713 TGCATCTATATACATCCGTATGTGG 58.194 40.000 3.56 0.00 45.99 4.17
1440 1965 8.877808 AATGCATCTATATACATCCGTATGTG 57.122 34.615 3.56 0.00 45.99 3.21
1457 1982 9.323985 GAGTGAATCTACTTCTAAAATGCATCT 57.676 33.333 0.00 0.00 34.75 2.90
1458 1983 9.102757 TGAGTGAATCTACTTCTAAAATGCATC 57.897 33.333 0.00 0.00 34.75 3.91
1459 1984 9.624373 ATGAGTGAATCTACTTCTAAAATGCAT 57.376 29.630 0.00 0.00 34.75 3.96
1460 1985 9.453572 AATGAGTGAATCTACTTCTAAAATGCA 57.546 29.630 0.00 0.00 34.75 3.96
1465 1990 9.507329 AGCAAAATGAGTGAATCTACTTCTAAA 57.493 29.630 0.00 0.00 34.75 1.85
1466 1991 9.155975 GAGCAAAATGAGTGAATCTACTTCTAA 57.844 33.333 0.00 0.00 34.75 2.10
1467 1992 7.766278 GGAGCAAAATGAGTGAATCTACTTCTA 59.234 37.037 0.00 0.00 34.75 2.10
1468 1993 6.597280 GGAGCAAAATGAGTGAATCTACTTCT 59.403 38.462 0.00 0.00 34.75 2.85
1469 1994 6.456181 CGGAGCAAAATGAGTGAATCTACTTC 60.456 42.308 0.00 0.00 0.00 3.01
1470 1995 5.352569 CGGAGCAAAATGAGTGAATCTACTT 59.647 40.000 0.00 0.00 0.00 2.24
1471 1996 4.872691 CGGAGCAAAATGAGTGAATCTACT 59.127 41.667 0.00 0.00 0.00 2.57
1472 1997 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
1473 1998 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
1474 1999 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
1475 2000 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
1476 2001 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
1477 2002 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
1478 2003 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
1479 2004 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
1480 2005 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
1481 2006 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
1482 2007 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
1483 2008 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
1484 2009 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
1485 2010 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
1486 2011 4.647853 ACTATGGACTACATACGGAGCAAA 59.352 41.667 0.00 0.00 41.03 3.68
1487 2012 4.037565 CACTATGGACTACATACGGAGCAA 59.962 45.833 0.00 0.00 41.03 3.91
1488 2013 3.568430 CACTATGGACTACATACGGAGCA 59.432 47.826 0.00 0.00 41.03 4.26
1489 2014 3.819337 TCACTATGGACTACATACGGAGC 59.181 47.826 0.00 0.00 41.03 4.70
1490 2015 6.207213 GTTTCACTATGGACTACATACGGAG 58.793 44.000 0.00 0.00 41.03 4.63
1491 2016 5.068198 GGTTTCACTATGGACTACATACGGA 59.932 44.000 0.00 0.00 41.03 4.69
1492 2017 5.068723 AGGTTTCACTATGGACTACATACGG 59.931 44.000 0.00 0.00 41.03 4.02
1493 2018 6.039493 AGAGGTTTCACTATGGACTACATACG 59.961 42.308 0.00 0.00 41.03 3.06
1494 2019 7.349412 AGAGGTTTCACTATGGACTACATAC 57.651 40.000 0.00 0.00 41.03 2.39
1495 2020 8.057011 TGTAGAGGTTTCACTATGGACTACATA 58.943 37.037 0.00 0.00 41.03 2.29
1496 2021 6.895756 TGTAGAGGTTTCACTATGGACTACAT 59.104 38.462 0.00 0.00 43.68 2.29
1497 2022 6.250711 TGTAGAGGTTTCACTATGGACTACA 58.749 40.000 0.00 0.00 36.46 2.74
1498 2023 6.770746 TGTAGAGGTTTCACTATGGACTAC 57.229 41.667 0.00 0.00 0.00 2.73
1499 2024 7.672660 TCTTTGTAGAGGTTTCACTATGGACTA 59.327 37.037 0.00 0.00 0.00 2.59
1500 2025 6.497259 TCTTTGTAGAGGTTTCACTATGGACT 59.503 38.462 0.00 0.00 0.00 3.85
1501 2026 6.590677 GTCTTTGTAGAGGTTTCACTATGGAC 59.409 42.308 0.00 0.00 0.00 4.02
1502 2027 6.497259 AGTCTTTGTAGAGGTTTCACTATGGA 59.503 38.462 0.00 0.00 0.00 3.41
1503 2028 6.702329 AGTCTTTGTAGAGGTTTCACTATGG 58.298 40.000 0.00 0.00 0.00 2.74
1504 2029 9.877178 ATAAGTCTTTGTAGAGGTTTCACTATG 57.123 33.333 0.00 0.00 0.00 2.23
1519 2044 7.985752 CCTCCGTTCCTAAATATAAGTCTTTGT 59.014 37.037 0.00 0.00 0.00 2.83
1520 2045 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
1521 2046 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
1522 2047 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
1523 2048 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
1524 2049 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
1525 2050 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
1526 2051 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
1527 2052 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
1529 2054 8.912614 ATATTACTCCCTCCGTTCCTAAATAT 57.087 34.615 0.00 0.00 0.00 1.28
1531 2056 8.912614 ATATATTACTCCCTCCGTTCCTAAAT 57.087 34.615 0.00 0.00 0.00 1.40
1532 2057 8.731591 AATATATTACTCCCTCCGTTCCTAAA 57.268 34.615 0.00 0.00 0.00 1.85
1533 2058 9.827198 TTAATATATTACTCCCTCCGTTCCTAA 57.173 33.333 4.61 0.00 0.00 2.69
1534 2059 9.827198 TTTAATATATTACTCCCTCCGTTCCTA 57.173 33.333 4.61 0.00 0.00 2.94
1535 2060 8.731591 TTTAATATATTACTCCCTCCGTTCCT 57.268 34.615 4.61 0.00 0.00 3.36
1536 2061 9.783081 TTTTTAATATATTACTCCCTCCGTTCC 57.217 33.333 4.61 0.00 0.00 3.62
1880 2423 7.543359 TGATTTCAATTTCCACTTCCTCATT 57.457 32.000 0.00 0.00 0.00 2.57
1934 2477 5.929415 TGTTGCTGTAGACAAAATCATACGA 59.071 36.000 0.00 0.00 0.00 3.43
2118 2664 4.240096 CGAAAATGCCTTGCTTCAGAATT 58.760 39.130 0.00 0.00 0.00 2.17
2188 2734 2.208619 TCGGTCTTGGGGCGTTACA 61.209 57.895 0.00 0.00 0.00 2.41
2189 2735 1.739196 GTCGGTCTTGGGGCGTTAC 60.739 63.158 0.00 0.00 0.00 2.50
2190 2736 2.658422 GTCGGTCTTGGGGCGTTA 59.342 61.111 0.00 0.00 0.00 3.18
2191 2737 4.675029 CGTCGGTCTTGGGGCGTT 62.675 66.667 0.00 0.00 0.00 4.84
2194 2740 4.699522 AAGCGTCGGTCTTGGGGC 62.700 66.667 0.00 0.00 0.00 5.80
2195 2741 2.434359 GAAGCGTCGGTCTTGGGG 60.434 66.667 0.00 0.00 0.00 4.96
2196 2742 1.738099 CTGAAGCGTCGGTCTTGGG 60.738 63.158 0.00 0.00 0.00 4.12
2197 2743 0.319555 TTCTGAAGCGTCGGTCTTGG 60.320 55.000 8.38 0.00 0.00 3.61
2198 2744 1.063806 CTTCTGAAGCGTCGGTCTTG 58.936 55.000 8.38 0.00 0.00 3.02
2199 2745 0.959553 TCTTCTGAAGCGTCGGTCTT 59.040 50.000 12.54 0.00 0.00 3.01
2200 2746 1.178276 ATCTTCTGAAGCGTCGGTCT 58.822 50.000 12.54 0.00 0.00 3.85
2201 2747 1.997669 AATCTTCTGAAGCGTCGGTC 58.002 50.000 12.54 0.00 0.00 4.79
2202 2748 2.338500 GAAATCTTCTGAAGCGTCGGT 58.662 47.619 12.54 0.00 0.00 4.69
2203 2749 1.661112 GGAAATCTTCTGAAGCGTCGG 59.339 52.381 12.54 1.52 0.00 4.79
2204 2750 2.611518 AGGAAATCTTCTGAAGCGTCG 58.388 47.619 12.54 0.00 0.00 5.12
2205 2751 6.670077 AATAAGGAAATCTTCTGAAGCGTC 57.330 37.500 12.54 8.89 36.93 5.19
2206 2752 7.454260 AAAATAAGGAAATCTTCTGAAGCGT 57.546 32.000 12.54 1.25 36.93 5.07
2207 2753 6.684555 CGAAAATAAGGAAATCTTCTGAAGCG 59.315 38.462 12.54 1.82 36.93 4.68
2208 2754 7.483059 CACGAAAATAAGGAAATCTTCTGAAGC 59.517 37.037 12.54 0.00 36.93 3.86
2209 2755 8.721478 TCACGAAAATAAGGAAATCTTCTGAAG 58.279 33.333 11.18 11.18 36.93 3.02
2210 2756 8.615878 TCACGAAAATAAGGAAATCTTCTGAA 57.384 30.769 0.00 0.00 36.93 3.02
2211 2757 8.792830 ATCACGAAAATAAGGAAATCTTCTGA 57.207 30.769 0.00 0.00 36.93 3.27
2212 2758 7.848051 CGATCACGAAAATAAGGAAATCTTCTG 59.152 37.037 0.00 0.00 42.66 3.02
2213 2759 7.466050 GCGATCACGAAAATAAGGAAATCTTCT 60.466 37.037 0.00 0.00 42.66 2.85
2214 2760 6.629252 GCGATCACGAAAATAAGGAAATCTTC 59.371 38.462 0.00 0.00 42.66 2.87
2215 2761 6.458342 GGCGATCACGAAAATAAGGAAATCTT 60.458 38.462 0.00 0.00 42.66 2.40
2216 2762 5.007724 GGCGATCACGAAAATAAGGAAATCT 59.992 40.000 0.00 0.00 42.66 2.40
2217 2763 5.205565 GGCGATCACGAAAATAAGGAAATC 58.794 41.667 0.00 0.00 42.66 2.17
2218 2764 4.260620 CGGCGATCACGAAAATAAGGAAAT 60.261 41.667 0.00 0.00 42.66 2.17
2219 2765 3.062909 CGGCGATCACGAAAATAAGGAAA 59.937 43.478 0.00 0.00 42.66 3.13
2220 2766 2.605818 CGGCGATCACGAAAATAAGGAA 59.394 45.455 0.00 0.00 42.66 3.36
2221 2767 2.198406 CGGCGATCACGAAAATAAGGA 58.802 47.619 0.00 0.00 42.66 3.36
2222 2768 1.931172 ACGGCGATCACGAAAATAAGG 59.069 47.619 16.62 0.00 42.66 2.69
2223 2769 2.347452 ACACGGCGATCACGAAAATAAG 59.653 45.455 16.62 0.00 42.66 1.73
2224 2770 2.092995 CACACGGCGATCACGAAAATAA 59.907 45.455 16.62 0.00 42.66 1.40
2225 2771 1.656594 CACACGGCGATCACGAAAATA 59.343 47.619 16.62 0.00 42.66 1.40
2226 2772 0.442310 CACACGGCGATCACGAAAAT 59.558 50.000 16.62 0.00 42.66 1.82
2227 2773 0.876777 ACACACGGCGATCACGAAAA 60.877 50.000 16.62 0.00 42.66 2.29
2228 2774 0.876777 AACACACGGCGATCACGAAA 60.877 50.000 16.62 0.00 42.66 3.46
2229 2775 0.876777 AAACACACGGCGATCACGAA 60.877 50.000 16.62 0.00 42.66 3.85
2230 2776 1.279527 GAAACACACGGCGATCACGA 61.280 55.000 16.62 0.00 42.66 4.35
2231 2777 1.129809 GAAACACACGGCGATCACG 59.870 57.895 16.62 5.37 42.93 4.35
2232 2778 0.865769 AAGAAACACACGGCGATCAC 59.134 50.000 16.62 0.00 0.00 3.06
2233 2779 1.588674 AAAGAAACACACGGCGATCA 58.411 45.000 16.62 0.00 0.00 2.92
2234 2780 2.286772 ACAAAAGAAACACACGGCGATC 60.287 45.455 16.62 1.64 0.00 3.69
2235 2781 1.673920 ACAAAAGAAACACACGGCGAT 59.326 42.857 16.62 0.00 0.00 4.58
2236 2782 1.088306 ACAAAAGAAACACACGGCGA 58.912 45.000 16.62 0.00 0.00 5.54
2237 2783 1.187715 CACAAAAGAAACACACGGCG 58.812 50.000 4.80 4.80 0.00 6.46
2238 2784 0.920664 GCACAAAAGAAACACACGGC 59.079 50.000 0.00 0.00 0.00 5.68
2239 2785 2.559998 AGCACAAAAGAAACACACGG 57.440 45.000 0.00 0.00 0.00 4.94
2240 2786 2.027926 GCAAGCACAAAAGAAACACACG 59.972 45.455 0.00 0.00 0.00 4.49
2241 2787 3.253230 AGCAAGCACAAAAGAAACACAC 58.747 40.909 0.00 0.00 0.00 3.82
2242 2788 3.193267 AGAGCAAGCACAAAAGAAACACA 59.807 39.130 0.00 0.00 0.00 3.72
2243 2789 3.774066 AGAGCAAGCACAAAAGAAACAC 58.226 40.909 0.00 0.00 0.00 3.32
2244 2790 4.454728 AAGAGCAAGCACAAAAGAAACA 57.545 36.364 0.00 0.00 0.00 2.83
2245 2791 5.784750 AAAAGAGCAAGCACAAAAGAAAC 57.215 34.783 0.00 0.00 0.00 2.78
2246 2792 8.491331 AAATAAAAGAGCAAGCACAAAAGAAA 57.509 26.923 0.00 0.00 0.00 2.52
2247 2793 8.491331 AAAATAAAAGAGCAAGCACAAAAGAA 57.509 26.923 0.00 0.00 0.00 2.52
2248 2794 8.389603 CAAAAATAAAAGAGCAAGCACAAAAGA 58.610 29.630 0.00 0.00 0.00 2.52
2249 2795 7.164662 GCAAAAATAAAAGAGCAAGCACAAAAG 59.835 33.333 0.00 0.00 0.00 2.27
2250 2796 6.966066 GCAAAAATAAAAGAGCAAGCACAAAA 59.034 30.769 0.00 0.00 0.00 2.44
2251 2797 6.093219 TGCAAAAATAAAAGAGCAAGCACAAA 59.907 30.769 0.00 0.00 0.00 2.83
2252 2798 5.583854 TGCAAAAATAAAAGAGCAAGCACAA 59.416 32.000 0.00 0.00 0.00 3.33
2253 2799 5.114780 TGCAAAAATAAAAGAGCAAGCACA 58.885 33.333 0.00 0.00 0.00 4.57
2254 2800 5.655893 TGCAAAAATAAAAGAGCAAGCAC 57.344 34.783 0.00 0.00 0.00 4.40
2255 2801 6.660722 CAATGCAAAAATAAAAGAGCAAGCA 58.339 32.000 0.00 0.00 35.45 3.91
2256 2802 5.566395 GCAATGCAAAAATAAAAGAGCAAGC 59.434 36.000 0.00 0.00 35.45 4.01
2257 2803 6.660722 TGCAATGCAAAAATAAAAGAGCAAG 58.339 32.000 5.01 0.00 34.76 4.01
2258 2804 6.615264 TGCAATGCAAAAATAAAAGAGCAA 57.385 29.167 5.01 0.00 34.76 3.91
2259 2805 6.427242 TGATGCAATGCAAAAATAAAAGAGCA 59.573 30.769 13.45 0.00 43.62 4.26
2260 2806 6.833839 TGATGCAATGCAAAAATAAAAGAGC 58.166 32.000 13.45 0.00 43.62 4.09
2261 2807 8.447833 ACATGATGCAATGCAAAAATAAAAGAG 58.552 29.630 13.45 0.00 43.62 2.85
2262 2808 8.325421 ACATGATGCAATGCAAAAATAAAAGA 57.675 26.923 13.45 0.00 43.62 2.52
2263 2809 8.231161 TGACATGATGCAATGCAAAAATAAAAG 58.769 29.630 13.45 0.00 43.62 2.27
2264 2810 8.095937 TGACATGATGCAATGCAAAAATAAAA 57.904 26.923 13.45 0.00 43.62 1.52
2265 2811 7.668525 TGACATGATGCAATGCAAAAATAAA 57.331 28.000 13.45 0.00 43.62 1.40
2266 2812 7.549488 TGATGACATGATGCAATGCAAAAATAA 59.451 29.630 13.45 0.00 43.62 1.40
2267 2813 7.042335 TGATGACATGATGCAATGCAAAAATA 58.958 30.769 13.45 0.00 43.62 1.40
2268 2814 5.877564 TGATGACATGATGCAATGCAAAAAT 59.122 32.000 13.45 3.29 43.62 1.82
2269 2815 5.238583 TGATGACATGATGCAATGCAAAAA 58.761 33.333 13.45 0.59 43.62 1.94
2270 2816 4.822026 TGATGACATGATGCAATGCAAAA 58.178 34.783 13.45 3.51 43.62 2.44
2271 2817 4.457834 TGATGACATGATGCAATGCAAA 57.542 36.364 13.45 3.94 43.62 3.68
2272 2818 4.664150 ATGATGACATGATGCAATGCAA 57.336 36.364 13.45 0.00 37.45 4.08
2275 2821 4.561326 ATGGCATGATGACATGATGCAATG 60.561 41.667 31.93 11.07 46.11 2.82
2276 2822 3.578282 ATGGCATGATGACATGATGCAAT 59.422 39.130 31.93 26.49 46.11 3.56
2277 2823 2.962421 ATGGCATGATGACATGATGCAA 59.038 40.909 31.93 25.60 46.11 4.08
2278 2824 2.593026 ATGGCATGATGACATGATGCA 58.407 42.857 31.93 21.63 46.11 3.96
2285 2831 3.827722 ATGACATGATGGCATGATGACA 58.172 40.909 29.57 28.05 46.11 3.58
2311 2857 9.847224 TGCAATTTATTAGGTGGGTTTTAAAAA 57.153 25.926 1.31 0.00 0.00 1.94
2313 2859 9.442047 CATGCAATTTATTAGGTGGGTTTTAAA 57.558 29.630 0.00 0.00 0.00 1.52
2314 2860 8.043710 CCATGCAATTTATTAGGTGGGTTTTAA 58.956 33.333 0.00 0.00 0.00 1.52
2315 2861 7.400339 TCCATGCAATTTATTAGGTGGGTTTTA 59.600 33.333 0.00 0.00 0.00 1.52
2316 2862 6.214412 TCCATGCAATTTATTAGGTGGGTTTT 59.786 34.615 0.00 0.00 0.00 2.43
2317 2863 5.723887 TCCATGCAATTTATTAGGTGGGTTT 59.276 36.000 0.00 0.00 0.00 3.27
2318 2864 5.276440 TCCATGCAATTTATTAGGTGGGTT 58.724 37.500 0.00 0.00 0.00 4.11
2319 2865 4.877773 TCCATGCAATTTATTAGGTGGGT 58.122 39.130 0.00 0.00 0.00 4.51
2320 2866 5.776716 AGATCCATGCAATTTATTAGGTGGG 59.223 40.000 0.00 0.00 0.00 4.61
2321 2867 6.906157 AGATCCATGCAATTTATTAGGTGG 57.094 37.500 0.00 0.00 0.00 4.61
2322 2868 7.041167 TCGAAGATCCATGCAATTTATTAGGTG 60.041 37.037 0.00 0.00 0.00 4.00
2323 2869 6.998074 TCGAAGATCCATGCAATTTATTAGGT 59.002 34.615 0.00 0.00 0.00 3.08
2324 2870 7.439157 TCGAAGATCCATGCAATTTATTAGG 57.561 36.000 0.00 0.00 0.00 2.69
2325 2871 8.180267 GGATCGAAGATCCATGCAATTTATTAG 58.820 37.037 20.66 0.00 45.12 1.73
2326 2872 7.665145 TGGATCGAAGATCCATGCAATTTATTA 59.335 33.333 23.43 1.23 45.12 0.98
2327 2873 6.491062 TGGATCGAAGATCCATGCAATTTATT 59.509 34.615 23.43 0.00 45.12 1.40
2328 2874 6.005823 TGGATCGAAGATCCATGCAATTTAT 58.994 36.000 23.43 0.00 45.12 1.40
2329 2875 5.375773 TGGATCGAAGATCCATGCAATTTA 58.624 37.500 23.43 2.50 45.12 1.40
2330 2876 4.209538 TGGATCGAAGATCCATGCAATTT 58.790 39.130 23.43 0.00 45.12 1.82
2331 2877 3.824133 TGGATCGAAGATCCATGCAATT 58.176 40.909 23.43 0.00 45.12 2.32
2332 2878 3.497103 TGGATCGAAGATCCATGCAAT 57.503 42.857 23.43 0.00 45.12 3.56
2346 2892 6.204688 TGAATTCCCTCGATTTAAATGGATCG 59.795 38.462 12.58 7.80 44.76 3.69
2347 2893 7.013274 TGTGAATTCCCTCGATTTAAATGGATC 59.987 37.037 12.58 7.56 0.00 3.36
2348 2894 6.833416 TGTGAATTCCCTCGATTTAAATGGAT 59.167 34.615 12.58 0.00 0.00 3.41
2349 2895 6.184068 TGTGAATTCCCTCGATTTAAATGGA 58.816 36.000 5.17 9.07 0.00 3.41
2350 2896 6.449635 TGTGAATTCCCTCGATTTAAATGG 57.550 37.500 5.17 4.49 0.00 3.16
2351 2897 6.919662 CCATGTGAATTCCCTCGATTTAAATG 59.080 38.462 5.17 0.00 0.00 2.32
2352 2898 6.607198 ACCATGTGAATTCCCTCGATTTAAAT 59.393 34.615 0.00 0.00 0.00 1.40
2353 2899 5.949354 ACCATGTGAATTCCCTCGATTTAAA 59.051 36.000 2.27 0.00 0.00 1.52
2354 2900 5.356751 CACCATGTGAATTCCCTCGATTTAA 59.643 40.000 2.27 0.00 35.23 1.52
2355 2901 4.881273 CACCATGTGAATTCCCTCGATTTA 59.119 41.667 2.27 0.00 35.23 1.40
2356 2902 3.696051 CACCATGTGAATTCCCTCGATTT 59.304 43.478 2.27 0.00 35.23 2.17
2357 2903 3.054434 TCACCATGTGAATTCCCTCGATT 60.054 43.478 2.27 0.00 39.78 3.34
2358 2904 2.505407 TCACCATGTGAATTCCCTCGAT 59.495 45.455 2.27 0.00 39.78 3.59
2359 2905 1.905894 TCACCATGTGAATTCCCTCGA 59.094 47.619 2.27 0.00 39.78 4.04
2360 2906 2.401583 TCACCATGTGAATTCCCTCG 57.598 50.000 2.27 0.00 39.78 4.63
2361 2907 5.254339 GAAATCACCATGTGAATTCCCTC 57.746 43.478 12.02 0.00 45.96 4.30


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.