Multiple sequence alignment - TraesCS3D01G184300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G184300 chr3D 100.000 3216 0 0 1 3216 170201920 170205135 0.000000e+00 5939.0
1 TraesCS3D01G184300 chr3D 88.667 150 17 0 1325 1474 170237157 170237306 1.970000e-42 183.0
2 TraesCS3D01G184300 chr3D 77.545 334 53 18 1474 1804 170237424 170237738 7.090000e-42 182.0
3 TraesCS3D01G184300 chr3D 74.859 354 56 18 4 350 141417794 141417467 2.600000e-26 130.0
4 TraesCS3D01G184300 chr3D 100.000 65 0 0 1984 2048 455004810 455004874 1.570000e-23 121.0
5 TraesCS3D01G184300 chr3D 100.000 64 0 0 1984 2047 177374371 177374434 5.640000e-23 119.0
6 TraesCS3D01G184300 chr3D 88.421 95 11 0 2089 2183 170237832 170237926 7.290000e-22 115.0
7 TraesCS3D01G184300 chr3A 90.601 1415 57 32 521 1902 207829609 207830980 0.000000e+00 1807.0
8 TraesCS3D01G184300 chr3A 92.958 710 31 12 2048 2749 207831037 207831735 0.000000e+00 1016.0
9 TraesCS3D01G184300 chr3A 94.771 153 8 0 2860 3012 207831734 207831886 4.150000e-59 239.0
10 TraesCS3D01G184300 chr3A 85.652 230 28 3 1 228 207829250 207829476 1.490000e-58 237.0
11 TraesCS3D01G184300 chr3A 77.713 341 59 13 1474 1804 207844396 207844729 3.270000e-45 193.0
12 TraesCS3D01G184300 chr3A 85.600 125 16 1 381 505 207829502 207829624 2.600000e-26 130.0
13 TraesCS3D01G184300 chr3A 86.842 114 15 0 2750 2863 272725 272612 9.360000e-26 128.0
14 TraesCS3D01G184300 chr3A 89.474 95 10 0 2089 2183 207844824 207844918 1.570000e-23 121.0
15 TraesCS3D01G184300 chr3A 85.294 68 10 0 103 170 544175555 544175488 1.600000e-08 71.3
16 TraesCS3D01G184300 chr3A 100.000 28 0 0 1959 1986 207831014 207831041 6.000000e-03 52.8
17 TraesCS3D01G184300 chr3B 93.717 1146 28 10 521 1639 245357601 245358729 0.000000e+00 1677.0
18 TraesCS3D01G184300 chr3B 91.983 711 34 10 2048 2749 245359376 245360072 0.000000e+00 976.0
19 TraesCS3D01G184300 chr3B 88.515 505 51 4 1 503 245357115 245357614 3.550000e-169 604.0
20 TraesCS3D01G184300 chr3B 92.000 275 13 4 1631 1903 245359033 245359300 8.420000e-101 377.0
21 TraesCS3D01G184300 chr3B 95.545 202 9 0 3015 3216 552644003 552643802 1.110000e-84 324.0
22 TraesCS3D01G184300 chr3B 90.850 153 13 1 2863 3014 245360072 245360224 1.510000e-48 204.0
23 TraesCS3D01G184300 chr3B 78.107 338 56 12 1474 1805 245508987 245509312 7.040000e-47 198.0
24 TraesCS3D01G184300 chr3B 89.333 150 16 0 1325 1474 245508713 245508862 4.240000e-44 189.0
25 TraesCS3D01G184300 chr3B 84.906 106 16 0 2750 2855 616439983 616439878 1.220000e-19 108.0
26 TraesCS3D01G184300 chr2B 92.941 255 12 5 1395 1646 776315394 776315143 1.820000e-97 366.0
27 TraesCS3D01G184300 chr2B 97.368 38 1 0 592 629 303818738 303818701 7.450000e-07 65.8
28 TraesCS3D01G184300 chr7B 97.500 200 5 0 3017 3216 43255383 43255582 3.070000e-90 342.0
29 TraesCS3D01G184300 chr7B 96.020 201 8 0 3016 3216 625042110 625041910 8.600000e-86 327.0
30 TraesCS3D01G184300 chr5B 96.517 201 7 0 3016 3216 278792811 278793011 1.850000e-87 333.0
31 TraesCS3D01G184300 chr5B 85.593 118 17 0 2749 2866 391819705 391819588 1.210000e-24 124.0
32 TraesCS3D01G184300 chr5B 76.404 178 30 8 113 281 235440793 235440967 5.720000e-13 86.1
33 TraesCS3D01G184300 chr6B 96.040 202 8 0 3015 3216 542076462 542076261 2.390000e-86 329.0
34 TraesCS3D01G184300 chr6B 96.020 201 7 1 3016 3216 192051357 192051158 3.090000e-85 326.0
35 TraesCS3D01G184300 chr6B 86.726 113 14 1 2750 2862 377934455 377934344 1.210000e-24 124.0
36 TraesCS3D01G184300 chr1B 96.040 202 8 0 3015 3216 679810570 679810369 2.390000e-86 329.0
37 TraesCS3D01G184300 chr1B 95.610 205 8 1 3012 3216 72042403 72042606 8.600000e-86 327.0
38 TraesCS3D01G184300 chr2D 95.588 204 9 0 3013 3216 90909999 90910202 8.600000e-86 327.0
39 TraesCS3D01G184300 chr2D 100.000 65 0 0 1984 2048 275486963 275487027 1.570000e-23 121.0
40 TraesCS3D01G184300 chr6D 88.889 117 13 0 2749 2865 17055007 17055123 9.300000e-31 145.0
41 TraesCS3D01G184300 chr6D 100.000 64 0 0 1984 2047 11693910 11693847 5.640000e-23 119.0
42 TraesCS3D01G184300 chr6D 98.507 67 1 0 1984 2050 15629596 15629662 5.640000e-23 119.0
43 TraesCS3D01G184300 chr4A 88.785 107 12 0 2749 2855 319837271 319837377 7.240000e-27 132.0
44 TraesCS3D01G184300 chr7D 96.000 75 1 2 1984 2056 603673242 603673316 1.570000e-23 121.0
45 TraesCS3D01G184300 chr7D 85.981 107 15 0 2749 2855 155295826 155295720 7.290000e-22 115.0
46 TraesCS3D01G184300 chr5D 97.183 71 2 0 1984 2054 383985812 383985882 1.570000e-23 121.0
47 TraesCS3D01G184300 chr5D 97.143 70 1 1 1984 2052 108005106 108005175 2.030000e-22 117.0
48 TraesCS3D01G184300 chr4D 100.000 64 0 0 1984 2047 319893659 319893596 5.640000e-23 119.0
49 TraesCS3D01G184300 chr4D 76.503 183 38 4 1 180 122207690 122207870 9.500000e-16 95.3
50 TraesCS3D01G184300 chr2A 77.907 86 19 0 218 303 46116813 46116898 2.000000e-03 54.7
51 TraesCS3D01G184300 chrUn 100.000 26 0 0 2750 2775 475878015 475878040 7.500000e-02 49.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G184300 chr3D 170201920 170205135 3215 False 5939.0 5939 100.000 1 3216 1 chr3D.!!$F1 3215
1 TraesCS3D01G184300 chr3A 207829250 207831886 2636 False 580.3 1807 91.597 1 3012 6 chr3A.!!$F1 3011
2 TraesCS3D01G184300 chr3B 245357115 245360224 3109 False 767.6 1677 91.413 1 3014 5 chr3B.!!$F1 3013

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
338 341 0.107165 GGATACAAGGGGTGCCAGTC 60.107 60.0 0.0 0.0 0.0 3.51 F
750 816 0.254747 CGCCCCCATTGAAACCTCTA 59.745 55.0 0.0 0.0 0.0 2.43 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1600 1692 0.114168 AGAGGCTGAGGTCTGTCTGT 59.886 55.0 0.0 0.0 29.74 3.41 R
2747 3177 0.320508 AGCTTTTTCGGACGGAGGAC 60.321 55.0 0.0 0.0 0.00 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 3.949885 TTAGGCGCACTCCTCCCGA 62.950 63.158 10.83 0.00 37.66 5.14
149 152 1.900351 CCATGTCAGAGAAGGCCGA 59.100 57.895 0.00 0.00 0.00 5.54
197 200 0.472352 AGTGGGTAGGGTTTCGTCCA 60.472 55.000 0.00 0.00 0.00 4.02
216 219 4.288105 GTCCAGGATGTGAATAGGGATGAT 59.712 45.833 0.00 0.00 0.00 2.45
217 220 4.287845 TCCAGGATGTGAATAGGGATGATG 59.712 45.833 0.00 0.00 0.00 3.07
218 221 4.287845 CCAGGATGTGAATAGGGATGATGA 59.712 45.833 0.00 0.00 0.00 2.92
228 231 9.334947 GTGAATAGGGATGATGAATATATGTGG 57.665 37.037 0.00 0.00 0.00 4.17
234 237 4.551702 TGATGAATATATGTGGGGTCGG 57.448 45.455 0.00 0.00 0.00 4.79
242 245 4.815108 GTGGGGTCGGAATGGGCC 62.815 72.222 0.00 0.00 0.00 5.80
245 248 3.728373 GGGTCGGAATGGGCCAGT 61.728 66.667 13.78 10.20 0.00 4.00
256 259 1.376037 GGGCCAGTGTGTGCTAGAC 60.376 63.158 4.39 0.00 0.00 2.59
262 265 0.598562 AGTGTGTGCTAGACCAGACG 59.401 55.000 0.00 0.00 32.16 4.18
265 268 0.596577 GTGTGCTAGACCAGACGTGA 59.403 55.000 0.00 0.00 0.00 4.35
307 310 1.536662 GACTCCCCATATCCGCCCT 60.537 63.158 0.00 0.00 0.00 5.19
336 339 4.986467 GGATACAAGGGGTGCCAG 57.014 61.111 0.00 0.00 0.00 4.85
338 341 0.107165 GGATACAAGGGGTGCCAGTC 60.107 60.000 0.00 0.00 0.00 3.51
341 344 2.124507 TACAAGGGGTGCCAGTCAGC 62.125 60.000 0.00 0.00 42.24 4.26
352 355 3.768633 CAGTCAGCCTGGATGTACC 57.231 57.895 12.27 1.61 37.54 3.34
431 434 2.364579 TGCCCGGACGAATAGGGT 60.365 61.111 0.73 0.00 46.69 4.34
432 435 1.076118 TGCCCGGACGAATAGGGTA 60.076 57.895 0.73 4.76 46.69 3.69
433 436 0.470456 TGCCCGGACGAATAGGGTAT 60.470 55.000 0.73 0.00 46.69 2.73
449 452 8.792830 AATAGGGTATATGTTTGAGTAGTCCA 57.207 34.615 0.00 0.00 0.00 4.02
450 453 8.792830 ATAGGGTATATGTTTGAGTAGTCCAA 57.207 34.615 0.00 0.00 0.00 3.53
451 454 7.691993 AGGGTATATGTTTGAGTAGTCCAAT 57.308 36.000 0.00 0.00 0.00 3.16
471 474 8.358148 GTCCAATTGTAGATACTCTCGGATAAA 58.642 37.037 4.43 0.00 0.00 1.40
475 478 9.627395 AATTGTAGATACTCTCGGATAAAATCG 57.373 33.333 0.00 0.00 0.00 3.34
477 480 7.804712 TGTAGATACTCTCGGATAAAATCGTC 58.195 38.462 0.00 0.00 0.00 4.20
497 500 4.635765 CGTCATGATACCTCCAACAATTGT 59.364 41.667 4.92 4.92 0.00 2.71
498 501 5.447683 CGTCATGATACCTCCAACAATTGTG 60.448 44.000 12.82 6.46 0.00 3.33
499 502 5.415701 GTCATGATACCTCCAACAATTGTGT 59.584 40.000 12.82 7.77 40.75 3.72
500 503 5.415389 TCATGATACCTCCAACAATTGTGTG 59.585 40.000 12.82 11.99 38.27 3.82
501 504 4.724399 TGATACCTCCAACAATTGTGTGT 58.276 39.130 12.82 3.37 38.27 3.72
502 505 4.759693 TGATACCTCCAACAATTGTGTGTC 59.240 41.667 12.82 12.80 38.27 3.67
503 506 3.011566 ACCTCCAACAATTGTGTGTCA 57.988 42.857 12.82 1.72 38.27 3.58
504 507 3.565307 ACCTCCAACAATTGTGTGTCAT 58.435 40.909 12.82 0.00 38.27 3.06
505 508 3.960102 ACCTCCAACAATTGTGTGTCATT 59.040 39.130 12.82 0.00 38.27 2.57
506 509 4.405358 ACCTCCAACAATTGTGTGTCATTT 59.595 37.500 12.82 0.00 38.27 2.32
507 510 4.984161 CCTCCAACAATTGTGTGTCATTTC 59.016 41.667 12.82 0.00 38.27 2.17
508 511 4.942852 TCCAACAATTGTGTGTCATTTCC 58.057 39.130 12.82 0.00 38.27 3.13
509 512 4.057432 CCAACAATTGTGTGTCATTTCCC 58.943 43.478 12.82 0.00 38.27 3.97
510 513 4.202243 CCAACAATTGTGTGTCATTTCCCT 60.202 41.667 12.82 0.00 38.27 4.20
511 514 4.853924 ACAATTGTGTGTCATTTCCCTC 57.146 40.909 11.07 0.00 36.31 4.30
512 515 4.214310 ACAATTGTGTGTCATTTCCCTCA 58.786 39.130 11.07 0.00 36.31 3.86
513 516 4.648762 ACAATTGTGTGTCATTTCCCTCAA 59.351 37.500 11.07 0.00 36.31 3.02
514 517 5.128499 ACAATTGTGTGTCATTTCCCTCAAA 59.872 36.000 11.07 0.00 36.31 2.69
515 518 5.867903 ATTGTGTGTCATTTCCCTCAAAA 57.132 34.783 0.00 0.00 0.00 2.44
516 519 5.667539 TTGTGTGTCATTTCCCTCAAAAA 57.332 34.783 0.00 0.00 0.00 1.94
517 520 5.867903 TGTGTGTCATTTCCCTCAAAAAT 57.132 34.783 0.00 0.00 0.00 1.82
518 521 6.968263 TGTGTGTCATTTCCCTCAAAAATA 57.032 33.333 0.00 0.00 0.00 1.40
519 522 7.353414 TGTGTGTCATTTCCCTCAAAAATAA 57.647 32.000 0.00 0.00 0.00 1.40
520 523 7.786030 TGTGTGTCATTTCCCTCAAAAATAAA 58.214 30.769 0.00 0.00 0.00 1.40
521 524 8.260818 TGTGTGTCATTTCCCTCAAAAATAAAA 58.739 29.630 0.00 0.00 0.00 1.52
522 525 8.547894 GTGTGTCATTTCCCTCAAAAATAAAAC 58.452 33.333 0.00 0.00 0.00 2.43
523 526 8.260818 TGTGTCATTTCCCTCAAAAATAAAACA 58.739 29.630 0.00 0.00 0.00 2.83
524 527 9.103861 GTGTCATTTCCCTCAAAAATAAAACAA 57.896 29.630 0.00 0.00 0.00 2.83
525 528 9.844257 TGTCATTTCCCTCAAAAATAAAACAAT 57.156 25.926 0.00 0.00 0.00 2.71
628 660 4.748892 TCATCAGAGTCAGGAACGAATTC 58.251 43.478 0.00 0.00 0.00 2.17
629 661 3.217599 TCAGAGTCAGGAACGAATTCG 57.782 47.619 25.64 25.64 46.33 3.34
630 662 2.094700 TCAGAGTCAGGAACGAATTCGG 60.095 50.000 29.79 13.08 44.95 4.30
631 663 1.000145 GAGTCAGGAACGAATTCGGC 59.000 55.000 29.79 20.76 44.95 5.54
632 664 0.608640 AGTCAGGAACGAATTCGGCT 59.391 50.000 29.79 17.48 44.95 5.52
633 665 0.721718 GTCAGGAACGAATTCGGCTG 59.278 55.000 29.79 18.93 44.95 4.85
634 666 0.606096 TCAGGAACGAATTCGGCTGA 59.394 50.000 29.79 20.43 44.95 4.26
635 667 1.001520 TCAGGAACGAATTCGGCTGAA 59.998 47.619 29.79 11.11 44.95 3.02
636 668 1.804151 CAGGAACGAATTCGGCTGAAA 59.196 47.619 29.79 0.00 44.95 2.69
637 669 2.225491 CAGGAACGAATTCGGCTGAAAA 59.775 45.455 29.79 0.00 44.95 2.29
638 670 2.484264 AGGAACGAATTCGGCTGAAAAG 59.516 45.455 29.79 9.05 44.95 2.27
639 671 2.482721 GGAACGAATTCGGCTGAAAAGA 59.517 45.455 29.79 0.00 44.95 2.52
640 672 3.058501 GGAACGAATTCGGCTGAAAAGAA 60.059 43.478 29.79 0.00 44.95 2.52
641 673 3.813529 ACGAATTCGGCTGAAAAGAAG 57.186 42.857 29.79 5.19 44.95 2.85
642 674 3.399330 ACGAATTCGGCTGAAAAGAAGA 58.601 40.909 29.79 0.00 44.95 2.87
643 675 3.433615 ACGAATTCGGCTGAAAAGAAGAG 59.566 43.478 29.79 2.79 44.95 2.85
644 676 3.433615 CGAATTCGGCTGAAAAGAAGAGT 59.566 43.478 20.16 0.00 37.71 3.24
645 677 4.434857 CGAATTCGGCTGAAAAGAAGAGTC 60.435 45.833 20.16 0.00 37.71 3.36
646 678 2.457366 TCGGCTGAAAAGAAGAGTCC 57.543 50.000 0.00 0.00 0.00 3.85
647 679 1.071605 CGGCTGAAAAGAAGAGTCCG 58.928 55.000 0.00 0.00 0.00 4.79
648 680 1.443802 GGCTGAAAAGAAGAGTCCGG 58.556 55.000 0.00 0.00 0.00 5.14
649 681 1.002087 GGCTGAAAAGAAGAGTCCGGA 59.998 52.381 0.00 0.00 0.00 5.14
650 682 2.550208 GGCTGAAAAGAAGAGTCCGGAA 60.550 50.000 5.23 0.00 0.00 4.30
651 683 2.480802 GCTGAAAAGAAGAGTCCGGAAC 59.519 50.000 5.23 3.30 0.00 3.62
750 816 0.254747 CGCCCCCATTGAAACCTCTA 59.745 55.000 0.00 0.00 0.00 2.43
762 828 7.333174 CCATTGAAACCTCTACTTCTTCTCTTC 59.667 40.741 0.00 0.00 0.00 2.87
763 829 7.604657 TTGAAACCTCTACTTCTTCTCTTCT 57.395 36.000 0.00 0.00 0.00 2.85
937 1007 7.013369 CCAATCGATCGTCCCTCTATATCATAA 59.987 40.741 15.94 0.00 0.00 1.90
938 1008 8.572185 CAATCGATCGTCCCTCTATATCATAAT 58.428 37.037 15.94 0.00 0.00 1.28
939 1009 9.794719 AATCGATCGTCCCTCTATATCATAATA 57.205 33.333 15.94 0.00 0.00 0.98
940 1010 9.794719 ATCGATCGTCCCTCTATATCATAATAA 57.205 33.333 15.94 0.00 0.00 1.40
946 1019 8.010540 CGTCCCTCTATATCATAATAATCGTCG 58.989 40.741 0.00 0.00 0.00 5.12
948 1021 9.274206 TCCCTCTATATCATAATAATCGTCGAG 57.726 37.037 0.00 0.00 0.00 4.04
950 1023 8.018520 CCTCTATATCATAATAATCGTCGAGGC 58.981 40.741 0.00 0.00 0.00 4.70
951 1024 7.573627 TCTATATCATAATAATCGTCGAGGCG 58.426 38.462 0.00 0.00 0.00 5.52
955 1028 0.318784 AATAATCGTCGAGGCGAGGC 60.319 55.000 5.89 0.00 44.43 4.70
1320 1412 4.042060 CGCACGTTCGTGTGTCCG 62.042 66.667 24.37 16.22 41.94 4.79
1597 1689 2.619177 CTCAACCTCCTCGTCGATGTAT 59.381 50.000 4.21 0.00 0.00 2.29
1598 1690 3.812262 TCAACCTCCTCGTCGATGTATA 58.188 45.455 4.21 0.00 0.00 1.47
1599 1691 3.562973 TCAACCTCCTCGTCGATGTATAC 59.437 47.826 4.21 0.00 0.00 1.47
1600 1692 3.204306 ACCTCCTCGTCGATGTATACA 57.796 47.619 8.27 8.27 0.00 2.29
1601 1693 2.877168 ACCTCCTCGTCGATGTATACAC 59.123 50.000 7.96 1.72 0.00 2.90
1602 1694 2.876550 CCTCCTCGTCGATGTATACACA 59.123 50.000 7.96 0.00 39.52 3.72
1603 1695 3.058846 CCTCCTCGTCGATGTATACACAG 60.059 52.174 7.96 5.41 38.30 3.66
1614 1706 5.504830 CGATGTATACACAGACAGACCTCAG 60.505 48.000 7.96 0.00 38.30 3.35
1625 1724 2.178580 CAGACCTCAGCCTCTTCTTCT 58.821 52.381 0.00 0.00 0.00 2.85
1643 2053 3.992943 TCTTCCTCTCTCTCTCGTCTT 57.007 47.619 0.00 0.00 0.00 3.01
1685 2095 4.974368 AACTACATGTCTCTCTTCTCCG 57.026 45.455 0.00 0.00 0.00 4.63
1686 2096 3.283751 ACTACATGTCTCTCTTCTCCGG 58.716 50.000 0.00 0.00 0.00 5.14
1687 2097 2.516227 ACATGTCTCTCTTCTCCGGA 57.484 50.000 2.93 2.93 0.00 5.14
1688 2098 2.808919 ACATGTCTCTCTTCTCCGGAA 58.191 47.619 5.23 0.00 0.00 4.30
1767 2177 1.406887 GGACCGTACCTCACCTACGTA 60.407 57.143 0.00 0.00 36.13 3.57
1815 2227 6.884295 TCCTCATCAAGGTATTTTGTAACCAG 59.116 38.462 0.00 0.00 46.32 4.00
1820 2234 2.997986 AGGTATTTTGTAACCAGACGCG 59.002 45.455 3.53 3.53 38.30 6.01
1827 2241 1.080093 TAACCAGACGCGCAGAAGG 60.080 57.895 5.73 6.28 0.00 3.46
1841 2255 3.365364 CGCAGAAGGACCAAACAAATCTC 60.365 47.826 0.00 0.00 0.00 2.75
1860 2274 4.137872 CGCCGTTCCGCTCCCTAA 62.138 66.667 0.00 0.00 0.00 2.69
1957 2371 4.335594 ACCTATTTCAAACGCCAGCTATTC 59.664 41.667 0.00 0.00 0.00 1.75
1986 2400 6.932960 ACTTTTTCCGTATGTAGTGCTTACTT 59.067 34.615 3.42 0.00 33.23 2.24
1987 2401 7.443272 ACTTTTTCCGTATGTAGTGCTTACTTT 59.557 33.333 3.42 0.00 33.23 2.66
1988 2402 7.733402 TTTTCCGTATGTAGTGCTTACTTTT 57.267 32.000 3.42 0.00 33.23 2.27
1989 2403 6.956299 TTCCGTATGTAGTGCTTACTTTTC 57.044 37.500 3.42 0.00 33.23 2.29
1990 2404 5.097529 TCCGTATGTAGTGCTTACTTTTCG 58.902 41.667 3.42 0.00 33.23 3.46
1991 2405 5.097529 CCGTATGTAGTGCTTACTTTTCGA 58.902 41.667 3.42 0.00 33.23 3.71
1992 2406 5.574055 CCGTATGTAGTGCTTACTTTTCGAA 59.426 40.000 0.00 0.00 33.23 3.71
1993 2407 6.089820 CCGTATGTAGTGCTTACTTTTCGAAA 59.910 38.462 6.47 6.47 33.23 3.46
1994 2408 7.201496 CCGTATGTAGTGCTTACTTTTCGAAAT 60.201 37.037 12.12 0.00 33.23 2.17
1995 2409 7.630987 CGTATGTAGTGCTTACTTTTCGAAATG 59.369 37.037 19.08 19.08 33.23 2.32
1996 2410 6.854496 TGTAGTGCTTACTTTTCGAAATGT 57.146 33.333 26.44 26.44 33.23 2.71
1997 2411 6.655062 TGTAGTGCTTACTTTTCGAAATGTG 58.345 36.000 29.50 19.18 33.23 3.21
1998 2412 5.751243 AGTGCTTACTTTTCGAAATGTGT 57.249 34.783 29.50 21.34 0.00 3.72
1999 2413 6.854496 AGTGCTTACTTTTCGAAATGTGTA 57.146 33.333 29.50 20.54 0.00 2.90
2000 2414 7.435068 AGTGCTTACTTTTCGAAATGTGTAT 57.565 32.000 29.50 12.66 0.00 2.29
2001 2415 7.871853 AGTGCTTACTTTTCGAAATGTGTATT 58.128 30.769 29.50 13.83 0.00 1.89
2002 2416 8.349983 AGTGCTTACTTTTCGAAATGTGTATTT 58.650 29.630 29.50 14.03 39.16 1.40
2003 2417 8.627428 GTGCTTACTTTTCGAAATGTGTATTTC 58.373 33.333 29.50 16.80 45.57 2.17
2032 2446 3.289128 GCATATGCACGTAGGAGCA 57.711 52.632 22.84 9.91 45.65 4.26
2033 2447 1.581934 GCATATGCACGTAGGAGCAA 58.418 50.000 22.84 2.63 44.85 3.91
2034 2448 1.939934 GCATATGCACGTAGGAGCAAA 59.060 47.619 22.84 0.00 44.85 3.68
2035 2449 2.354510 GCATATGCACGTAGGAGCAAAA 59.645 45.455 22.84 4.03 44.85 2.44
2036 2450 3.546815 GCATATGCACGTAGGAGCAAAAG 60.547 47.826 22.84 5.72 44.85 2.27
2037 2451 1.453155 ATGCACGTAGGAGCAAAAGG 58.547 50.000 11.45 0.00 44.85 3.11
2038 2452 0.605319 TGCACGTAGGAGCAAAAGGG 60.605 55.000 5.02 0.00 39.51 3.95
2039 2453 0.321298 GCACGTAGGAGCAAAAGGGA 60.321 55.000 0.00 0.00 32.99 4.20
2040 2454 1.880646 GCACGTAGGAGCAAAAGGGAA 60.881 52.381 0.00 0.00 32.99 3.97
2041 2455 2.711542 CACGTAGGAGCAAAAGGGAAT 58.288 47.619 0.00 0.00 0.00 3.01
2042 2456 3.869065 CACGTAGGAGCAAAAGGGAATA 58.131 45.455 0.00 0.00 0.00 1.75
2043 2457 4.451900 CACGTAGGAGCAAAAGGGAATAT 58.548 43.478 0.00 0.00 0.00 1.28
2044 2458 4.511826 CACGTAGGAGCAAAAGGGAATATC 59.488 45.833 0.00 0.00 0.00 1.63
2045 2459 4.065789 CGTAGGAGCAAAAGGGAATATCC 58.934 47.826 0.00 0.00 35.23 2.59
2046 2460 3.214696 AGGAGCAAAAGGGAATATCCG 57.785 47.619 0.00 0.00 37.43 4.18
2054 2468 6.766467 AGCAAAAGGGAATATCCGTTACTAAG 59.234 38.462 4.90 0.00 43.15 2.18
2080 2494 7.831691 TCCTTTTCTGTGATGTTATTTTCCA 57.168 32.000 0.00 0.00 0.00 3.53
2282 2696 0.677731 TTGCTTTCTGGCGGGATGAG 60.678 55.000 0.00 0.00 34.52 2.90
2283 2697 1.221840 GCTTTCTGGCGGGATGAGA 59.778 57.895 0.00 0.00 0.00 3.27
2284 2698 0.179034 GCTTTCTGGCGGGATGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
2285 2699 1.876322 CTTTCTGGCGGGATGAGATC 58.124 55.000 0.00 0.00 0.00 2.75
2323 2738 4.130857 TGTATGTACAAACCCACAGTGTG 58.869 43.478 16.70 16.70 39.89 3.82
2333 2748 1.172180 CCACAGTGTGTGCCCGATTT 61.172 55.000 21.48 0.00 46.51 2.17
2476 2900 0.323999 TCACTACCGCTTGCCTCCTA 60.324 55.000 0.00 0.00 0.00 2.94
2481 2911 1.497161 ACCGCTTGCCTCCTAACTAT 58.503 50.000 0.00 0.00 0.00 2.12
2484 2914 3.279434 CCGCTTGCCTCCTAACTATTTT 58.721 45.455 0.00 0.00 0.00 1.82
2565 2995 7.364200 TCTTGTTATAATTCGGTTTTGGTGTG 58.636 34.615 0.00 0.00 0.00 3.82
2571 3001 9.843334 TTATAATTCGGTTTTGGTGTGTAATTC 57.157 29.630 0.00 0.00 0.00 2.17
2572 3002 4.571372 TTCGGTTTTGGTGTGTAATTCC 57.429 40.909 0.00 0.00 0.00 3.01
2692 3122 7.177744 TCCTTTTGAACTCCTAGTTTTGTTGTT 59.822 33.333 0.00 0.00 38.80 2.83
2726 3156 3.728279 ATAGGCGCCCGAACGAACC 62.728 63.158 26.15 0.00 34.06 3.62
2732 3162 2.433004 CCCGAACGAACCCCCTTT 59.567 61.111 0.00 0.00 0.00 3.11
2733 3163 1.673337 CCCGAACGAACCCCCTTTC 60.673 63.158 0.00 0.00 0.00 2.62
2741 3171 5.336134 CGAACGAACCCCCTTTCATATTTTT 60.336 40.000 0.00 0.00 0.00 1.94
2743 3173 4.221924 ACGAACCCCCTTTCATATTTTTGG 59.778 41.667 0.00 0.00 0.00 3.28
2746 3176 6.523035 AACCCCCTTTCATATTTTTGGTTT 57.477 33.333 0.00 0.00 29.69 3.27
2747 3177 5.875224 ACCCCCTTTCATATTTTTGGTTTG 58.125 37.500 0.00 0.00 0.00 2.93
2748 3178 5.371176 ACCCCCTTTCATATTTTTGGTTTGT 59.629 36.000 0.00 0.00 0.00 2.83
2749 3179 5.937540 CCCCCTTTCATATTTTTGGTTTGTC 59.062 40.000 0.00 0.00 0.00 3.18
2750 3180 5.937540 CCCCTTTCATATTTTTGGTTTGTCC 59.062 40.000 0.00 0.00 0.00 4.02
2751 3181 6.239858 CCCCTTTCATATTTTTGGTTTGTCCT 60.240 38.462 0.00 0.00 37.07 3.85
2752 3182 6.873605 CCCTTTCATATTTTTGGTTTGTCCTC 59.126 38.462 0.00 0.00 37.07 3.71
2753 3183 6.873605 CCTTTCATATTTTTGGTTTGTCCTCC 59.126 38.462 0.00 0.00 37.07 4.30
2754 3184 5.637006 TCATATTTTTGGTTTGTCCTCCG 57.363 39.130 0.00 0.00 37.07 4.63
2755 3185 5.074115 TCATATTTTTGGTTTGTCCTCCGT 58.926 37.500 0.00 0.00 37.07 4.69
2756 3186 5.182380 TCATATTTTTGGTTTGTCCTCCGTC 59.818 40.000 0.00 0.00 37.07 4.79
2757 3187 1.682740 TTTTGGTTTGTCCTCCGTCC 58.317 50.000 0.00 0.00 37.07 4.79
2758 3188 0.533308 TTTGGTTTGTCCTCCGTCCG 60.533 55.000 0.00 0.00 37.07 4.79
2759 3189 1.401318 TTGGTTTGTCCTCCGTCCGA 61.401 55.000 0.00 0.00 37.07 4.55
2760 3190 1.368579 GGTTTGTCCTCCGTCCGAA 59.631 57.895 0.00 0.00 0.00 4.30
2761 3191 0.249996 GGTTTGTCCTCCGTCCGAAA 60.250 55.000 0.00 0.00 0.00 3.46
2762 3192 1.585297 GTTTGTCCTCCGTCCGAAAA 58.415 50.000 0.00 0.00 0.00 2.29
2763 3193 1.941975 GTTTGTCCTCCGTCCGAAAAA 59.058 47.619 0.00 0.00 0.00 1.94
2764 3194 1.873698 TTGTCCTCCGTCCGAAAAAG 58.126 50.000 0.00 0.00 0.00 2.27
2765 3195 0.601841 TGTCCTCCGTCCGAAAAAGC 60.602 55.000 0.00 0.00 0.00 3.51
2766 3196 0.320508 GTCCTCCGTCCGAAAAAGCT 60.321 55.000 0.00 0.00 0.00 3.74
2767 3197 0.395312 TCCTCCGTCCGAAAAAGCTT 59.605 50.000 0.00 0.00 0.00 3.74
2768 3198 0.517316 CCTCCGTCCGAAAAAGCTTG 59.483 55.000 0.00 0.00 0.00 4.01
2769 3199 1.226746 CTCCGTCCGAAAAAGCTTGT 58.773 50.000 0.00 0.00 0.00 3.16
2770 3200 1.194772 CTCCGTCCGAAAAAGCTTGTC 59.805 52.381 0.00 0.00 0.00 3.18
2771 3201 0.237498 CCGTCCGAAAAAGCTTGTCC 59.763 55.000 0.00 0.00 0.00 4.02
2772 3202 0.237498 CGTCCGAAAAAGCTTGTCCC 59.763 55.000 0.00 0.00 0.00 4.46
2773 3203 1.314730 GTCCGAAAAAGCTTGTCCCA 58.685 50.000 0.00 0.00 0.00 4.37
2774 3204 1.679153 GTCCGAAAAAGCTTGTCCCAA 59.321 47.619 0.00 0.00 0.00 4.12
2775 3205 1.953686 TCCGAAAAAGCTTGTCCCAAG 59.046 47.619 0.00 0.00 0.00 3.61
2776 3206 1.000274 CCGAAAAAGCTTGTCCCAAGG 60.000 52.381 0.00 0.00 0.00 3.61
2777 3207 1.681264 CGAAAAAGCTTGTCCCAAGGT 59.319 47.619 0.00 3.01 0.00 3.50
2778 3208 2.100749 CGAAAAAGCTTGTCCCAAGGTT 59.899 45.455 13.87 13.87 39.38 3.50
2779 3209 3.457234 GAAAAAGCTTGTCCCAAGGTTG 58.543 45.455 18.72 0.00 37.93 3.77
2780 3210 2.159179 AAAGCTTGTCCCAAGGTTGT 57.841 45.000 18.72 8.99 37.93 3.32
2781 3211 1.402787 AAGCTTGTCCCAAGGTTGTG 58.597 50.000 17.66 0.00 36.71 3.33
2782 3212 0.258774 AGCTTGTCCCAAGGTTGTGT 59.741 50.000 3.01 0.00 0.00 3.72
2783 3213 0.668535 GCTTGTCCCAAGGTTGTGTC 59.331 55.000 6.15 0.00 0.00 3.67
2784 3214 1.750682 GCTTGTCCCAAGGTTGTGTCT 60.751 52.381 6.15 0.00 0.00 3.41
2785 3215 2.654863 CTTGTCCCAAGGTTGTGTCTT 58.345 47.619 0.00 0.00 0.00 3.01
2786 3216 2.051334 TGTCCCAAGGTTGTGTCTTG 57.949 50.000 0.00 0.00 40.75 3.02
2787 3217 1.562008 TGTCCCAAGGTTGTGTCTTGA 59.438 47.619 5.51 0.00 42.94 3.02
2788 3218 2.025793 TGTCCCAAGGTTGTGTCTTGAA 60.026 45.455 5.51 0.00 42.94 2.69
2789 3219 3.222603 GTCCCAAGGTTGTGTCTTGAAT 58.777 45.455 5.51 0.00 42.94 2.57
2790 3220 3.004734 GTCCCAAGGTTGTGTCTTGAATG 59.995 47.826 5.51 0.00 42.94 2.67
2791 3221 2.297033 CCCAAGGTTGTGTCTTGAATGG 59.703 50.000 5.51 0.00 42.94 3.16
2792 3222 3.221771 CCAAGGTTGTGTCTTGAATGGA 58.778 45.455 5.51 0.00 42.94 3.41
2793 3223 3.828451 CCAAGGTTGTGTCTTGAATGGAT 59.172 43.478 5.51 0.00 42.94 3.41
2794 3224 4.321452 CCAAGGTTGTGTCTTGAATGGATG 60.321 45.833 5.51 0.00 42.94 3.51
2795 3225 4.104383 AGGTTGTGTCTTGAATGGATGT 57.896 40.909 0.00 0.00 0.00 3.06
2796 3226 5.241403 AGGTTGTGTCTTGAATGGATGTA 57.759 39.130 0.00 0.00 0.00 2.29
2797 3227 5.819991 AGGTTGTGTCTTGAATGGATGTAT 58.180 37.500 0.00 0.00 0.00 2.29
2798 3228 5.882557 AGGTTGTGTCTTGAATGGATGTATC 59.117 40.000 0.00 0.00 0.00 2.24
2799 3229 5.882557 GGTTGTGTCTTGAATGGATGTATCT 59.117 40.000 0.00 0.00 0.00 1.98
2800 3230 7.047891 GGTTGTGTCTTGAATGGATGTATCTA 58.952 38.462 0.00 0.00 0.00 1.98
2801 3231 7.225538 GGTTGTGTCTTGAATGGATGTATCTAG 59.774 40.741 0.00 0.00 0.00 2.43
2802 3232 6.283694 TGTGTCTTGAATGGATGTATCTAGC 58.716 40.000 0.00 0.00 0.00 3.42
2803 3233 6.127083 TGTGTCTTGAATGGATGTATCTAGCA 60.127 38.462 0.00 0.00 0.00 3.49
2804 3234 6.201806 GTGTCTTGAATGGATGTATCTAGCAC 59.798 42.308 0.00 0.00 0.00 4.40
2805 3235 5.698545 GTCTTGAATGGATGTATCTAGCACC 59.301 44.000 0.00 0.00 0.00 5.01
2806 3236 5.366477 TCTTGAATGGATGTATCTAGCACCA 59.634 40.000 0.00 0.00 0.00 4.17
2807 3237 5.628797 TGAATGGATGTATCTAGCACCAA 57.371 39.130 0.00 0.00 0.00 3.67
2808 3238 6.191657 TGAATGGATGTATCTAGCACCAAT 57.808 37.500 0.00 0.00 0.00 3.16
2809 3239 6.604171 TGAATGGATGTATCTAGCACCAATT 58.396 36.000 0.00 0.00 0.00 2.32
2810 3240 7.062322 TGAATGGATGTATCTAGCACCAATTT 58.938 34.615 0.00 0.00 0.00 1.82
2811 3241 6.889301 ATGGATGTATCTAGCACCAATTTG 57.111 37.500 0.00 0.00 0.00 2.32
2812 3242 6.000246 TGGATGTATCTAGCACCAATTTGA 58.000 37.500 0.00 0.00 0.00 2.69
2813 3243 6.604171 TGGATGTATCTAGCACCAATTTGAT 58.396 36.000 0.00 0.00 0.00 2.57
2814 3244 6.487668 TGGATGTATCTAGCACCAATTTGATG 59.512 38.462 0.00 0.00 0.00 3.07
2815 3245 5.756195 TGTATCTAGCACCAATTTGATGC 57.244 39.130 7.72 7.72 37.08 3.91
2823 3253 5.756195 GCACCAATTTGATGCTAGATACA 57.244 39.130 8.56 0.00 32.99 2.29
2824 3254 6.323203 GCACCAATTTGATGCTAGATACAT 57.677 37.500 8.56 0.00 32.99 2.29
2825 3255 6.376978 GCACCAATTTGATGCTAGATACATC 58.623 40.000 8.56 0.00 43.46 3.06
2826 3256 6.569226 GCACCAATTTGATGCTAGATACATCC 60.569 42.308 8.56 0.00 42.68 3.51
2827 3257 6.487668 CACCAATTTGATGCTAGATACATCCA 59.512 38.462 0.00 0.00 42.68 3.41
2828 3258 7.176165 CACCAATTTGATGCTAGATACATCCAT 59.824 37.037 0.00 0.00 42.68 3.41
2829 3259 7.727186 ACCAATTTGATGCTAGATACATCCATT 59.273 33.333 0.00 0.00 42.68 3.16
2830 3260 8.582437 CCAATTTGATGCTAGATACATCCATTT 58.418 33.333 0.00 0.00 42.68 2.32
2831 3261 9.622004 CAATTTGATGCTAGATACATCCATTTC 57.378 33.333 0.00 0.00 42.68 2.17
2832 3262 8.929260 ATTTGATGCTAGATACATCCATTTCA 57.071 30.769 0.00 0.00 42.68 2.69
2833 3263 7.974482 TTGATGCTAGATACATCCATTTCAG 57.026 36.000 0.00 0.00 42.68 3.02
2834 3264 5.936372 TGATGCTAGATACATCCATTTCAGC 59.064 40.000 0.00 0.00 42.68 4.26
2835 3265 5.294734 TGCTAGATACATCCATTTCAGCA 57.705 39.130 0.00 0.00 34.36 4.41
2836 3266 5.683681 TGCTAGATACATCCATTTCAGCAA 58.316 37.500 0.00 0.00 33.86 3.91
2837 3267 5.528690 TGCTAGATACATCCATTTCAGCAAC 59.471 40.000 0.00 0.00 33.86 4.17
2838 3268 5.528690 GCTAGATACATCCATTTCAGCAACA 59.471 40.000 0.00 0.00 0.00 3.33
2839 3269 6.038603 GCTAGATACATCCATTTCAGCAACAA 59.961 38.462 0.00 0.00 0.00 2.83
2840 3270 6.839124 AGATACATCCATTTCAGCAACAAA 57.161 33.333 0.00 0.00 0.00 2.83
2841 3271 6.624423 AGATACATCCATTTCAGCAACAAAC 58.376 36.000 0.00 0.00 0.00 2.93
2842 3272 4.942761 ACATCCATTTCAGCAACAAACT 57.057 36.364 0.00 0.00 0.00 2.66
2843 3273 5.280654 ACATCCATTTCAGCAACAAACTT 57.719 34.783 0.00 0.00 0.00 2.66
2844 3274 5.673514 ACATCCATTTCAGCAACAAACTTT 58.326 33.333 0.00 0.00 0.00 2.66
2845 3275 6.114767 ACATCCATTTCAGCAACAAACTTTT 58.885 32.000 0.00 0.00 0.00 2.27
2846 3276 6.258507 ACATCCATTTCAGCAACAAACTTTTC 59.741 34.615 0.00 0.00 0.00 2.29
2847 3277 5.115480 TCCATTTCAGCAACAAACTTTTCC 58.885 37.500 0.00 0.00 0.00 3.13
2848 3278 4.025813 CCATTTCAGCAACAAACTTTTCCG 60.026 41.667 0.00 0.00 0.00 4.30
2849 3279 2.861462 TCAGCAACAAACTTTTCCGG 57.139 45.000 0.00 0.00 0.00 5.14
2850 3280 2.370349 TCAGCAACAAACTTTTCCGGA 58.630 42.857 0.00 0.00 0.00 5.14
2851 3281 2.098443 TCAGCAACAAACTTTTCCGGAC 59.902 45.455 1.83 0.00 0.00 4.79
2852 3282 1.064952 AGCAACAAACTTTTCCGGACG 59.935 47.619 1.83 0.00 0.00 4.79
2853 3283 1.862411 GCAACAAACTTTTCCGGACGG 60.862 52.381 1.83 3.96 0.00 4.79
2854 3284 1.671845 CAACAAACTTTTCCGGACGGA 59.328 47.619 1.83 9.76 43.52 4.69
2855 3285 2.265589 ACAAACTTTTCCGGACGGAT 57.734 45.000 14.89 0.00 44.74 4.18
2856 3286 3.405823 ACAAACTTTTCCGGACGGATA 57.594 42.857 14.89 7.06 44.74 2.59
2857 3287 3.332034 ACAAACTTTTCCGGACGGATAG 58.668 45.455 14.89 16.09 44.74 2.08
2858 3288 3.007182 ACAAACTTTTCCGGACGGATAGA 59.993 43.478 22.23 5.22 44.74 1.98
2859 3289 3.521947 AACTTTTCCGGACGGATAGAG 57.478 47.619 22.23 17.84 44.74 2.43
2868 3298 3.632604 CCGGACGGATAGAGTATATGCAT 59.367 47.826 4.40 3.79 37.50 3.96
2878 3308 7.561722 GGATAGAGTATATGCATTGGGAGTCTA 59.438 40.741 3.54 10.09 0.00 2.59
2976 3406 5.660864 TGAAAAAGAAAGTTCCTCAATGGGT 59.339 36.000 0.00 0.00 36.20 4.51
3018 3448 2.991540 GCAAGGCGGGCTCCTTTT 60.992 61.111 3.91 0.00 43.62 2.27
3019 3449 2.574018 GCAAGGCGGGCTCCTTTTT 61.574 57.895 3.91 0.00 43.62 1.94
3049 3479 9.460019 TGAAAAACTCCACACATATATTGATCA 57.540 29.630 0.00 0.00 0.00 2.92
3080 3510 9.647797 ACAATAGTCTTACAATCGTTCATTACA 57.352 29.630 0.00 0.00 0.00 2.41
3090 3520 8.445275 ACAATCGTTCATTACATAATTAGCCA 57.555 30.769 0.00 0.00 0.00 4.75
3091 3521 8.342634 ACAATCGTTCATTACATAATTAGCCAC 58.657 33.333 0.00 0.00 0.00 5.01
3092 3522 6.519353 TCGTTCATTACATAATTAGCCACG 57.481 37.500 0.00 0.00 0.00 4.94
3093 3523 5.050634 TCGTTCATTACATAATTAGCCACGC 60.051 40.000 0.00 0.00 0.00 5.34
3094 3524 5.277106 CGTTCATTACATAATTAGCCACGCA 60.277 40.000 0.00 0.00 0.00 5.24
3095 3525 5.922739 TCATTACATAATTAGCCACGCAG 57.077 39.130 0.00 0.00 0.00 5.18
3096 3526 4.754618 TCATTACATAATTAGCCACGCAGG 59.245 41.667 0.00 0.00 41.84 4.85
3097 3527 1.967319 ACATAATTAGCCACGCAGGG 58.033 50.000 0.00 0.00 38.09 4.45
3109 3539 4.002797 GCAGGGCGGAACAGAATT 57.997 55.556 0.00 0.00 0.00 2.17
3110 3540 3.168773 GCAGGGCGGAACAGAATTA 57.831 52.632 0.00 0.00 0.00 1.40
3111 3541 0.733150 GCAGGGCGGAACAGAATTAC 59.267 55.000 0.00 0.00 0.00 1.89
3112 3542 1.948611 GCAGGGCGGAACAGAATTACA 60.949 52.381 0.00 0.00 0.00 2.41
3113 3543 1.737793 CAGGGCGGAACAGAATTACAC 59.262 52.381 0.00 0.00 0.00 2.90
3114 3544 1.349688 AGGGCGGAACAGAATTACACA 59.650 47.619 0.00 0.00 0.00 3.72
3115 3545 1.737793 GGGCGGAACAGAATTACACAG 59.262 52.381 0.00 0.00 0.00 3.66
3116 3546 2.423577 GGCGGAACAGAATTACACAGT 58.576 47.619 0.00 0.00 0.00 3.55
3117 3547 3.592059 GGCGGAACAGAATTACACAGTA 58.408 45.455 0.00 0.00 0.00 2.74
3118 3548 4.189231 GGCGGAACAGAATTACACAGTAT 58.811 43.478 0.00 0.00 0.00 2.12
3119 3549 5.353938 GGCGGAACAGAATTACACAGTATA 58.646 41.667 0.00 0.00 0.00 1.47
3120 3550 5.233689 GGCGGAACAGAATTACACAGTATAC 59.766 44.000 0.00 0.00 0.00 1.47
3121 3551 5.233689 GCGGAACAGAATTACACAGTATACC 59.766 44.000 0.00 0.00 0.00 2.73
3122 3552 6.334989 CGGAACAGAATTACACAGTATACCA 58.665 40.000 0.00 0.00 0.00 3.25
3123 3553 6.984474 CGGAACAGAATTACACAGTATACCAT 59.016 38.462 0.00 0.00 0.00 3.55
3124 3554 7.494625 CGGAACAGAATTACACAGTATACCATT 59.505 37.037 0.00 0.00 0.00 3.16
3125 3555 8.612619 GGAACAGAATTACACAGTATACCATTG 58.387 37.037 0.00 0.00 0.00 2.82
3126 3556 8.506168 AACAGAATTACACAGTATACCATTGG 57.494 34.615 0.00 0.00 0.00 3.16
3127 3557 7.857456 ACAGAATTACACAGTATACCATTGGA 58.143 34.615 10.37 0.00 0.00 3.53
3128 3558 7.769044 ACAGAATTACACAGTATACCATTGGAC 59.231 37.037 10.37 0.00 0.00 4.02
3129 3559 7.768582 CAGAATTACACAGTATACCATTGGACA 59.231 37.037 10.37 0.00 0.00 4.02
3130 3560 8.494433 AGAATTACACAGTATACCATTGGACAT 58.506 33.333 10.37 4.83 0.00 3.06
3131 3561 8.450578 AATTACACAGTATACCATTGGACATG 57.549 34.615 10.37 3.17 0.00 3.21
3132 3562 4.199310 ACACAGTATACCATTGGACATGC 58.801 43.478 10.37 5.93 0.00 4.06
3133 3563 4.080356 ACACAGTATACCATTGGACATGCT 60.080 41.667 10.37 8.09 0.00 3.79
3134 3564 5.130311 ACACAGTATACCATTGGACATGCTA 59.870 40.000 10.37 0.00 0.00 3.49
3135 3565 6.183361 ACACAGTATACCATTGGACATGCTAT 60.183 38.462 10.37 0.00 0.00 2.97
3136 3566 6.369890 CACAGTATACCATTGGACATGCTATC 59.630 42.308 10.37 0.00 0.00 2.08
3137 3567 6.043127 ACAGTATACCATTGGACATGCTATCA 59.957 38.462 10.37 0.00 0.00 2.15
3138 3568 6.936335 CAGTATACCATTGGACATGCTATCAA 59.064 38.462 10.37 0.00 0.00 2.57
3139 3569 7.445096 CAGTATACCATTGGACATGCTATCAAA 59.555 37.037 10.37 0.00 0.00 2.69
3140 3570 7.998383 AGTATACCATTGGACATGCTATCAAAA 59.002 33.333 10.37 0.00 0.00 2.44
3141 3571 5.329035 ACCATTGGACATGCTATCAAAAC 57.671 39.130 10.37 0.00 0.00 2.43
3142 3572 5.018809 ACCATTGGACATGCTATCAAAACT 58.981 37.500 10.37 0.00 0.00 2.66
3143 3573 6.186957 ACCATTGGACATGCTATCAAAACTA 58.813 36.000 10.37 0.00 0.00 2.24
3144 3574 6.663093 ACCATTGGACATGCTATCAAAACTAA 59.337 34.615 10.37 0.00 0.00 2.24
3145 3575 7.178274 ACCATTGGACATGCTATCAAAACTAAA 59.822 33.333 10.37 0.00 0.00 1.85
3146 3576 8.199449 CCATTGGACATGCTATCAAAACTAAAT 58.801 33.333 0.00 0.00 0.00 1.40
3147 3577 9.590451 CATTGGACATGCTATCAAAACTAAATT 57.410 29.630 0.00 0.00 0.00 1.82
3149 3579 9.995003 TTGGACATGCTATCAAAACTAAATTTT 57.005 25.926 0.00 0.00 41.38 1.82
3163 3593 8.693542 AAACTAAATTTTGCTATCTCATGCAC 57.306 30.769 0.00 0.00 39.05 4.57
3164 3594 6.799512 ACTAAATTTTGCTATCTCATGCACC 58.200 36.000 0.00 0.00 39.05 5.01
3165 3595 3.976793 ATTTTGCTATCTCATGCACCG 57.023 42.857 0.00 0.00 39.05 4.94
3166 3596 1.016627 TTTGCTATCTCATGCACCGC 58.983 50.000 0.00 0.00 39.05 5.68
3167 3597 0.815213 TTGCTATCTCATGCACCGCC 60.815 55.000 0.00 0.00 39.05 6.13
3168 3598 1.070445 GCTATCTCATGCACCGCCT 59.930 57.895 0.00 0.00 0.00 5.52
3169 3599 0.533755 GCTATCTCATGCACCGCCTT 60.534 55.000 0.00 0.00 0.00 4.35
3170 3600 1.224075 CTATCTCATGCACCGCCTTG 58.776 55.000 0.00 0.00 0.00 3.61
3171 3601 0.541392 TATCTCATGCACCGCCTTGT 59.459 50.000 0.00 0.00 0.00 3.16
3172 3602 0.322816 ATCTCATGCACCGCCTTGTT 60.323 50.000 0.00 0.00 0.00 2.83
3173 3603 0.323302 TCTCATGCACCGCCTTGTTA 59.677 50.000 0.00 0.00 0.00 2.41
3174 3604 0.729116 CTCATGCACCGCCTTGTTAG 59.271 55.000 0.00 0.00 0.00 2.34
3175 3605 1.137404 CATGCACCGCCTTGTTAGC 59.863 57.895 0.00 0.00 0.00 3.09
3176 3606 2.046285 ATGCACCGCCTTGTTAGCC 61.046 57.895 0.00 0.00 0.00 3.93
3177 3607 2.359975 GCACCGCCTTGTTAGCCT 60.360 61.111 0.00 0.00 0.00 4.58
3178 3608 2.690778 GCACCGCCTTGTTAGCCTG 61.691 63.158 0.00 0.00 0.00 4.85
3179 3609 2.359975 ACCGCCTTGTTAGCCTGC 60.360 61.111 0.00 0.00 0.00 4.85
3180 3610 3.134127 CCGCCTTGTTAGCCTGCC 61.134 66.667 0.00 0.00 0.00 4.85
3181 3611 2.045926 CGCCTTGTTAGCCTGCCT 60.046 61.111 0.00 0.00 0.00 4.75
3182 3612 1.220749 CGCCTTGTTAGCCTGCCTA 59.779 57.895 0.00 0.00 0.00 3.93
3183 3613 0.179045 CGCCTTGTTAGCCTGCCTAT 60.179 55.000 0.00 0.00 0.00 2.57
3184 3614 1.598882 GCCTTGTTAGCCTGCCTATC 58.401 55.000 0.00 0.00 0.00 2.08
3185 3615 1.134098 GCCTTGTTAGCCTGCCTATCA 60.134 52.381 0.00 0.00 0.00 2.15
3186 3616 2.683742 GCCTTGTTAGCCTGCCTATCAA 60.684 50.000 0.00 0.00 35.50 2.57
3187 3617 3.825328 CCTTGTTAGCCTGCCTATCAAT 58.175 45.455 0.00 0.00 35.97 2.57
3188 3618 3.817647 CCTTGTTAGCCTGCCTATCAATC 59.182 47.826 0.00 0.00 35.97 2.67
3189 3619 4.445448 CCTTGTTAGCCTGCCTATCAATCT 60.445 45.833 0.00 0.00 35.97 2.40
3190 3620 4.778213 TGTTAGCCTGCCTATCAATCTT 57.222 40.909 0.00 0.00 0.00 2.40
3191 3621 5.887214 TGTTAGCCTGCCTATCAATCTTA 57.113 39.130 0.00 0.00 0.00 2.10
3192 3622 6.247229 TGTTAGCCTGCCTATCAATCTTAA 57.753 37.500 0.00 0.00 0.00 1.85
3193 3623 6.055588 TGTTAGCCTGCCTATCAATCTTAAC 58.944 40.000 0.00 0.00 0.00 2.01
3194 3624 4.778213 AGCCTGCCTATCAATCTTAACA 57.222 40.909 0.00 0.00 0.00 2.41
3195 3625 5.116084 AGCCTGCCTATCAATCTTAACAA 57.884 39.130 0.00 0.00 0.00 2.83
3196 3626 5.699143 AGCCTGCCTATCAATCTTAACAAT 58.301 37.500 0.00 0.00 0.00 2.71
3197 3627 5.767168 AGCCTGCCTATCAATCTTAACAATC 59.233 40.000 0.00 0.00 0.00 2.67
3198 3628 5.767168 GCCTGCCTATCAATCTTAACAATCT 59.233 40.000 0.00 0.00 0.00 2.40
3199 3629 6.264067 GCCTGCCTATCAATCTTAACAATCTT 59.736 38.462 0.00 0.00 0.00 2.40
3200 3630 7.646314 CCTGCCTATCAATCTTAACAATCTTG 58.354 38.462 0.00 0.00 0.00 3.02
3201 3631 7.500227 CCTGCCTATCAATCTTAACAATCTTGA 59.500 37.037 0.00 0.00 0.00 3.02
3202 3632 8.442632 TGCCTATCAATCTTAACAATCTTGAG 57.557 34.615 0.00 0.00 30.13 3.02
3203 3633 8.267183 TGCCTATCAATCTTAACAATCTTGAGA 58.733 33.333 0.00 0.00 30.13 3.27
3204 3634 9.282569 GCCTATCAATCTTAACAATCTTGAGAT 57.717 33.333 0.00 0.00 36.07 2.75
3209 3639 9.506018 TCAATCTTAACAATCTTGAGATCAACA 57.494 29.630 0.00 0.00 32.75 3.33
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
29 30 1.692042 CATGGCTCTCCACCCCTCT 60.692 63.158 0.00 0.00 46.92 3.69
33 34 4.864334 CCGCATGGCTCTCCACCC 62.864 72.222 0.00 0.00 46.92 4.61
90 93 1.583986 GATCTCCTGATCCGCCGAG 59.416 63.158 0.00 0.00 42.35 4.63
149 152 0.250513 AGCTCTTTTCCGGCGATCTT 59.749 50.000 9.30 0.00 0.00 2.40
162 165 3.721706 CTCCGCCCCCAAGCTCTT 61.722 66.667 0.00 0.00 0.00 2.85
183 186 1.553704 ACATCCTGGACGAAACCCTAC 59.446 52.381 0.00 0.00 0.00 3.18
197 200 6.715350 ATTCATCATCCCTATTCACATCCT 57.285 37.500 0.00 0.00 0.00 3.24
216 219 4.263287 CCATTCCGACCCCACATATATTCA 60.263 45.833 0.00 0.00 0.00 2.57
217 220 4.261801 CCATTCCGACCCCACATATATTC 58.738 47.826 0.00 0.00 0.00 1.75
218 221 3.010138 CCCATTCCGACCCCACATATATT 59.990 47.826 0.00 0.00 0.00 1.28
228 231 3.728373 ACTGGCCCATTCCGACCC 61.728 66.667 0.00 0.00 0.00 4.46
234 237 0.322456 TAGCACACACTGGCCCATTC 60.322 55.000 0.00 0.00 0.00 2.67
242 245 1.667177 CGTCTGGTCTAGCACACACTG 60.667 57.143 0.00 0.00 0.00 3.66
245 248 0.313987 CACGTCTGGTCTAGCACACA 59.686 55.000 0.00 0.00 0.00 3.72
304 307 5.337894 CCTTGTATCCAGCACATATCTAGGG 60.338 48.000 0.00 0.00 0.00 3.53
307 310 4.532126 CCCCTTGTATCCAGCACATATCTA 59.468 45.833 0.00 0.00 0.00 1.98
335 338 1.330655 CCGGTACATCCAGGCTGACT 61.331 60.000 17.94 0.00 35.57 3.41
336 339 1.144057 CCGGTACATCCAGGCTGAC 59.856 63.158 17.94 5.31 35.57 3.51
338 341 2.505982 CCCGGTACATCCAGGCTG 59.494 66.667 7.75 7.75 35.57 4.85
341 344 4.235762 CGGCCCGGTACATCCAGG 62.236 72.222 0.00 0.00 36.85 4.45
352 355 4.499633 ACCCTTTATGCCGGCCCG 62.500 66.667 26.77 7.28 0.00 6.13
356 359 3.209097 CCGCACCCTTTATGCCGG 61.209 66.667 0.00 0.00 40.09 6.13
360 363 2.120909 CCCAGCCGCACCCTTTATG 61.121 63.158 0.00 0.00 0.00 1.90
419 422 6.756221 ACTCAAACATATACCCTATTCGTCC 58.244 40.000 0.00 0.00 0.00 4.79
426 429 8.792830 ATTGGACTACTCAAACATATACCCTA 57.207 34.615 0.00 0.00 0.00 3.53
471 474 4.753516 TGTTGGAGGTATCATGACGATT 57.246 40.909 0.00 0.00 35.39 3.34
475 478 5.415701 ACACAATTGTTGGAGGTATCATGAC 59.584 40.000 8.77 0.00 28.43 3.06
477 480 5.183713 ACACACAATTGTTGGAGGTATCATG 59.816 40.000 8.77 0.00 31.66 3.07
497 500 8.260818 TGTTTTATTTTTGAGGGAAATGACACA 58.739 29.630 0.00 0.00 0.00 3.72
498 501 8.655651 TGTTTTATTTTTGAGGGAAATGACAC 57.344 30.769 0.00 0.00 0.00 3.67
499 502 9.844257 ATTGTTTTATTTTTGAGGGAAATGACA 57.156 25.926 0.00 0.00 0.00 3.58
504 507 9.454859 ACACAATTGTTTTATTTTTGAGGGAAA 57.545 25.926 8.77 0.00 28.43 3.13
505 508 9.103861 GACACAATTGTTTTATTTTTGAGGGAA 57.896 29.630 8.77 0.00 35.47 3.97
506 509 8.260818 TGACACAATTGTTTTATTTTTGAGGGA 58.739 29.630 8.77 0.00 35.47 4.20
507 510 8.430801 TGACACAATTGTTTTATTTTTGAGGG 57.569 30.769 8.77 0.00 35.47 4.30
517 520 9.689976 CATGTTTCCTATGACACAATTGTTTTA 57.310 29.630 8.77 0.00 35.00 1.52
518 521 8.203485 ACATGTTTCCTATGACACAATTGTTTT 58.797 29.630 8.77 0.00 35.00 2.43
519 522 7.725251 ACATGTTTCCTATGACACAATTGTTT 58.275 30.769 8.77 1.70 35.00 2.83
520 523 7.014134 TGACATGTTTCCTATGACACAATTGTT 59.986 33.333 8.77 0.41 35.00 2.83
521 524 6.489700 TGACATGTTTCCTATGACACAATTGT 59.510 34.615 4.92 4.92 35.00 2.71
522 525 6.912082 TGACATGTTTCCTATGACACAATTG 58.088 36.000 3.24 3.24 35.00 2.32
523 526 7.523293 TTGACATGTTTCCTATGACACAATT 57.477 32.000 0.00 0.00 35.00 2.32
524 527 7.523293 TTTGACATGTTTCCTATGACACAAT 57.477 32.000 0.00 0.00 35.00 2.71
525 528 6.951062 TTTGACATGTTTCCTATGACACAA 57.049 33.333 0.00 0.00 35.00 3.33
628 660 1.071605 CGGACTCTTCTTTTCAGCCG 58.928 55.000 0.00 0.00 0.00 5.52
629 661 1.002087 TCCGGACTCTTCTTTTCAGCC 59.998 52.381 0.00 0.00 0.00 4.85
630 662 2.457366 TCCGGACTCTTCTTTTCAGC 57.543 50.000 0.00 0.00 0.00 4.26
631 663 2.731976 CGTTCCGGACTCTTCTTTTCAG 59.268 50.000 1.83 0.00 0.00 3.02
632 664 2.363038 TCGTTCCGGACTCTTCTTTTCA 59.637 45.455 1.83 0.00 0.00 2.69
633 665 3.022607 TCGTTCCGGACTCTTCTTTTC 57.977 47.619 1.83 0.00 0.00 2.29
634 666 3.464111 TTCGTTCCGGACTCTTCTTTT 57.536 42.857 1.83 0.00 0.00 2.27
635 667 3.679824 ATTCGTTCCGGACTCTTCTTT 57.320 42.857 1.83 0.00 0.00 2.52
636 668 3.679824 AATTCGTTCCGGACTCTTCTT 57.320 42.857 1.83 0.00 0.00 2.52
637 669 4.796038 TTAATTCGTTCCGGACTCTTCT 57.204 40.909 1.83 0.00 0.00 2.85
638 670 5.107133 TGATTAATTCGTTCCGGACTCTTC 58.893 41.667 1.83 0.00 0.00 2.87
639 671 5.080969 TGATTAATTCGTTCCGGACTCTT 57.919 39.130 1.83 0.00 0.00 2.85
640 672 4.441634 CCTGATTAATTCGTTCCGGACTCT 60.442 45.833 1.83 0.00 0.00 3.24
641 673 3.802685 CCTGATTAATTCGTTCCGGACTC 59.197 47.826 1.83 0.00 0.00 3.36
642 674 3.793559 CCTGATTAATTCGTTCCGGACT 58.206 45.455 1.83 0.00 0.00 3.85
643 675 2.287103 GCCTGATTAATTCGTTCCGGAC 59.713 50.000 1.83 0.00 0.00 4.79
644 676 2.557317 GCCTGATTAATTCGTTCCGGA 58.443 47.619 0.00 0.00 0.00 5.14
645 677 1.260561 CGCCTGATTAATTCGTTCCGG 59.739 52.381 0.00 0.00 0.00 5.14
646 678 1.260561 CCGCCTGATTAATTCGTTCCG 59.739 52.381 0.00 0.00 0.00 4.30
647 679 1.002792 GCCGCCTGATTAATTCGTTCC 60.003 52.381 0.00 0.00 0.00 3.62
648 680 1.332904 CGCCGCCTGATTAATTCGTTC 60.333 52.381 0.00 0.00 0.00 3.95
649 681 0.655733 CGCCGCCTGATTAATTCGTT 59.344 50.000 0.00 0.00 0.00 3.85
650 682 1.772063 GCGCCGCCTGATTAATTCGT 61.772 55.000 0.00 0.00 0.00 3.85
651 683 1.082756 GCGCCGCCTGATTAATTCG 60.083 57.895 0.00 0.00 0.00 3.34
652 684 0.663153 AAGCGCCGCCTGATTAATTC 59.337 50.000 4.98 0.00 0.00 2.17
653 685 1.102978 AAAGCGCCGCCTGATTAATT 58.897 45.000 4.98 0.00 0.00 1.40
654 686 1.961793 TAAAGCGCCGCCTGATTAAT 58.038 45.000 4.98 0.00 0.00 1.40
655 687 1.668751 CTTAAAGCGCCGCCTGATTAA 59.331 47.619 4.98 6.17 0.00 1.40
656 688 1.295792 CTTAAAGCGCCGCCTGATTA 58.704 50.000 4.98 0.00 0.00 1.75
750 816 9.760077 TTTCGTTTATTACAGAAGAGAAGAAGT 57.240 29.630 0.00 0.00 0.00 3.01
762 828 7.252995 GCGATTGAGCTTTTTCGTTTATTACAG 60.253 37.037 12.64 0.00 34.24 2.74
763 829 6.521821 GCGATTGAGCTTTTTCGTTTATTACA 59.478 34.615 12.64 0.00 34.24 2.41
937 1007 1.286260 GCCTCGCCTCGACGATTAT 59.714 57.895 0.00 0.00 42.02 1.28
938 1008 2.719979 GCCTCGCCTCGACGATTA 59.280 61.111 0.00 0.00 42.02 1.75
939 1009 4.208686 GGCCTCGCCTCGACGATT 62.209 66.667 0.00 0.00 46.69 3.34
974 1047 1.683418 GATACGTCCCCACCCAGACC 61.683 65.000 0.00 0.00 0.00 3.85
975 1048 1.821258 GATACGTCCCCACCCAGAC 59.179 63.158 0.00 0.00 0.00 3.51
976 1049 1.755395 CGATACGTCCCCACCCAGA 60.755 63.158 0.00 0.00 0.00 3.86
977 1050 1.324740 TTCGATACGTCCCCACCCAG 61.325 60.000 0.00 0.00 0.00 4.45
978 1051 0.903924 TTTCGATACGTCCCCACCCA 60.904 55.000 0.00 0.00 0.00 4.51
979 1052 0.460811 GTTTCGATACGTCCCCACCC 60.461 60.000 0.00 0.00 0.00 4.61
1410 1502 2.515057 TGGTGCACGGTGTTGTCC 60.515 61.111 11.45 7.81 0.00 4.02
1434 1526 3.333189 CCGATGCCGACGATGCTG 61.333 66.667 0.00 0.00 38.22 4.41
1597 1689 1.203063 AGGCTGAGGTCTGTCTGTGTA 60.203 52.381 0.00 0.00 0.00 2.90
1598 1690 0.470833 AGGCTGAGGTCTGTCTGTGT 60.471 55.000 0.00 0.00 0.00 3.72
1599 1691 0.246086 GAGGCTGAGGTCTGTCTGTG 59.754 60.000 0.00 0.00 29.74 3.66
1600 1692 0.114168 AGAGGCTGAGGTCTGTCTGT 59.886 55.000 0.00 0.00 29.74 3.41
1601 1693 1.204467 GAAGAGGCTGAGGTCTGTCTG 59.796 57.143 0.00 0.00 29.74 3.51
1602 1694 1.077005 AGAAGAGGCTGAGGTCTGTCT 59.923 52.381 0.00 0.00 32.33 3.41
1603 1695 1.555967 AGAAGAGGCTGAGGTCTGTC 58.444 55.000 0.00 0.00 0.00 3.51
1614 1706 3.365472 AGAGAGAGGAAGAAGAAGAGGC 58.635 50.000 0.00 0.00 0.00 4.70
1625 1724 3.008594 ACAGAAGACGAGAGAGAGAGGAA 59.991 47.826 0.00 0.00 0.00 3.36
1669 2079 2.159170 GGTTCCGGAGAAGAGAGACATG 60.159 54.545 3.34 0.00 30.91 3.21
1767 2177 2.105993 GGGGTAGTCTGTTGTCAAGGTT 59.894 50.000 0.00 0.00 0.00 3.50
1815 2227 1.959226 TTTGGTCCTTCTGCGCGTC 60.959 57.895 8.43 0.00 0.00 5.19
1820 2234 3.057245 GGAGATTTGTTTGGTCCTTCTGC 60.057 47.826 0.00 0.00 0.00 4.26
1827 2241 0.526211 GGCGGGAGATTTGTTTGGTC 59.474 55.000 0.00 0.00 0.00 4.02
1860 2274 2.496070 TGAGATTTGGGTTCGAGATCGT 59.504 45.455 1.70 0.00 40.80 3.73
1925 2339 6.183360 TGGCGTTTGAAATAGGTACACTTTTT 60.183 34.615 0.00 0.00 33.79 1.94
1930 2344 3.425758 GCTGGCGTTTGAAATAGGTACAC 60.426 47.826 0.00 0.00 0.00 2.90
1931 2345 2.745281 GCTGGCGTTTGAAATAGGTACA 59.255 45.455 0.00 0.00 0.00 2.90
1957 2371 4.379082 GCACTACATACGGAAAAAGTTGGG 60.379 45.833 0.00 0.00 0.00 4.12
1990 2404 5.799936 CACCCATTGTCGAAATACACATTTC 59.200 40.000 0.00 0.92 44.44 2.17
1991 2405 5.708948 CACCCATTGTCGAAATACACATTT 58.291 37.500 0.00 0.00 37.06 2.32
1992 2406 4.380444 GCACCCATTGTCGAAATACACATT 60.380 41.667 0.00 0.00 0.00 2.71
1993 2407 3.128589 GCACCCATTGTCGAAATACACAT 59.871 43.478 0.00 0.00 0.00 3.21
1994 2408 2.486203 GCACCCATTGTCGAAATACACA 59.514 45.455 0.00 0.00 0.00 3.72
1995 2409 2.486203 TGCACCCATTGTCGAAATACAC 59.514 45.455 0.00 0.00 0.00 2.90
1996 2410 2.784347 TGCACCCATTGTCGAAATACA 58.216 42.857 0.00 0.00 0.00 2.29
1997 2411 5.451908 CATATGCACCCATTGTCGAAATAC 58.548 41.667 0.00 0.00 32.85 1.89
1998 2412 4.023279 GCATATGCACCCATTGTCGAAATA 60.023 41.667 22.84 0.00 41.59 1.40
1999 2413 3.243501 GCATATGCACCCATTGTCGAAAT 60.244 43.478 22.84 0.00 41.59 2.17
2000 2414 2.098934 GCATATGCACCCATTGTCGAAA 59.901 45.455 22.84 0.00 41.59 3.46
2001 2415 1.675483 GCATATGCACCCATTGTCGAA 59.325 47.619 22.84 0.00 41.59 3.71
2002 2416 1.308047 GCATATGCACCCATTGTCGA 58.692 50.000 22.84 0.00 41.59 4.20
2003 2417 3.851620 GCATATGCACCCATTGTCG 57.148 52.632 22.84 0.00 41.59 4.35
2022 2436 4.444449 GGATATTCCCTTTTGCTCCTACGT 60.444 45.833 0.00 0.00 0.00 3.57
2023 2437 4.065789 GGATATTCCCTTTTGCTCCTACG 58.934 47.826 0.00 0.00 0.00 3.51
2025 2439 3.714798 ACGGATATTCCCTTTTGCTCCTA 59.285 43.478 0.00 0.00 31.13 2.94
2026 2440 2.509964 ACGGATATTCCCTTTTGCTCCT 59.490 45.455 0.00 0.00 31.13 3.69
2027 2441 2.932261 ACGGATATTCCCTTTTGCTCC 58.068 47.619 0.00 0.00 31.13 4.70
2028 2442 5.123936 AGTAACGGATATTCCCTTTTGCTC 58.876 41.667 0.00 0.00 31.13 4.26
2029 2443 5.112129 AGTAACGGATATTCCCTTTTGCT 57.888 39.130 0.00 0.00 31.13 3.91
2030 2444 6.541278 ACTTAGTAACGGATATTCCCTTTTGC 59.459 38.462 0.00 0.00 31.13 3.68
2031 2445 8.502105 AACTTAGTAACGGATATTCCCTTTTG 57.498 34.615 0.00 0.00 31.13 2.44
2032 2446 7.772292 GGAACTTAGTAACGGATATTCCCTTTT 59.228 37.037 0.00 0.00 31.13 2.27
2033 2447 7.126879 AGGAACTTAGTAACGGATATTCCCTTT 59.873 37.037 0.00 0.00 35.92 3.11
2034 2448 6.614496 AGGAACTTAGTAACGGATATTCCCTT 59.386 38.462 0.00 0.00 35.92 3.95
2035 2449 6.141790 AGGAACTTAGTAACGGATATTCCCT 58.858 40.000 0.00 0.00 35.92 4.20
2036 2450 6.416631 AGGAACTTAGTAACGGATATTCCC 57.583 41.667 0.00 0.00 35.92 3.97
2054 2468 8.141268 TGGAAAATAACATCACAGAAAAGGAAC 58.859 33.333 0.00 0.00 0.00 3.62
2194 2608 1.068055 CACTTGGCATTGAGCTTGGTC 60.068 52.381 0.00 0.00 44.79 4.02
2195 2609 0.963962 CACTTGGCATTGAGCTTGGT 59.036 50.000 0.00 0.00 44.79 3.67
2196 2610 1.250328 TCACTTGGCATTGAGCTTGG 58.750 50.000 0.00 0.00 44.79 3.61
2201 2615 2.621998 GGATGGATCACTTGGCATTGAG 59.378 50.000 5.65 0.00 0.00 3.02
2285 2699 6.523201 TGTACATACAAATGATCGATCGATCG 59.477 38.462 38.64 35.91 42.18 3.69
2298 2712 8.553943 ACACACTGTGGGTTTGTACATACAAAT 61.554 37.037 10.48 0.79 45.41 2.32
2316 2731 0.667993 CAAAATCGGGCACACACTGT 59.332 50.000 0.00 0.00 0.00 3.55
2318 2733 2.340427 CCAAAATCGGGCACACACT 58.660 52.632 0.00 0.00 0.00 3.55
2481 2911 9.232473 GAAGAGAAGCCTAAAATCCTCTAAAAA 57.768 33.333 0.00 0.00 31.51 1.94
2484 2914 7.741554 AGAAGAGAAGCCTAAAATCCTCTAA 57.258 36.000 0.00 0.00 31.51 2.10
2497 2927 1.532523 AAGCAGCAAGAAGAGAAGCC 58.467 50.000 0.00 0.00 0.00 4.35
2552 2982 3.552875 TGGAATTACACACCAAAACCGA 58.447 40.909 0.00 0.00 0.00 4.69
2554 2984 5.465056 CACATTGGAATTACACACCAAAACC 59.535 40.000 0.00 0.00 44.91 3.27
2565 2995 8.612619 CAGGTACAATCTACACATTGGAATTAC 58.387 37.037 0.00 0.00 37.98 1.89
2571 3001 4.260985 TGCAGGTACAATCTACACATTGG 58.739 43.478 0.00 0.00 37.98 3.16
2572 3002 6.441093 AATGCAGGTACAATCTACACATTG 57.559 37.500 0.00 0.00 39.35 2.82
2692 3122 4.618460 GCGCCTATTGCTAGCAGATTACTA 60.618 45.833 18.45 0.87 38.05 1.82
2717 3147 2.389962 TATGAAAGGGGGTTCGTTCG 57.610 50.000 0.00 0.00 0.00 3.95
2726 3156 5.937540 GGACAAACCAAAAATATGAAAGGGG 59.062 40.000 0.00 0.00 38.79 4.79
2732 3162 5.074115 ACGGAGGACAAACCAAAAATATGA 58.926 37.500 0.00 0.00 42.04 2.15
2733 3163 5.385509 ACGGAGGACAAACCAAAAATATG 57.614 39.130 0.00 0.00 42.04 1.78
2741 3171 1.401318 TTCGGACGGAGGACAAACCA 61.401 55.000 0.00 0.00 42.04 3.67
2743 3173 1.585297 TTTTCGGACGGAGGACAAAC 58.415 50.000 0.00 0.00 0.00 2.93
2746 3176 0.601841 GCTTTTTCGGACGGAGGACA 60.602 55.000 0.00 0.00 0.00 4.02
2747 3177 0.320508 AGCTTTTTCGGACGGAGGAC 60.321 55.000 0.00 0.00 0.00 3.85
2748 3178 0.395312 AAGCTTTTTCGGACGGAGGA 59.605 50.000 0.00 0.00 0.00 3.71
2749 3179 0.517316 CAAGCTTTTTCGGACGGAGG 59.483 55.000 0.00 0.00 0.00 4.30
2750 3180 1.194772 GACAAGCTTTTTCGGACGGAG 59.805 52.381 0.00 0.00 0.00 4.63
2751 3181 1.223187 GACAAGCTTTTTCGGACGGA 58.777 50.000 0.00 0.00 0.00 4.69
2752 3182 0.237498 GGACAAGCTTTTTCGGACGG 59.763 55.000 0.00 0.00 0.00 4.79
2753 3183 0.237498 GGGACAAGCTTTTTCGGACG 59.763 55.000 0.00 0.00 0.00 4.79
2754 3184 1.314730 TGGGACAAGCTTTTTCGGAC 58.685 50.000 0.00 0.00 31.92 4.79
2755 3185 3.811031 TGGGACAAGCTTTTTCGGA 57.189 47.368 0.00 0.00 31.92 4.55
2767 3197 1.562008 TCAAGACACAACCTTGGGACA 59.438 47.619 0.00 0.00 40.88 4.02
2768 3198 2.341846 TCAAGACACAACCTTGGGAC 57.658 50.000 0.00 0.00 40.88 4.46
2769 3199 3.221771 CATTCAAGACACAACCTTGGGA 58.778 45.455 0.00 0.00 40.88 4.37
2770 3200 2.297033 CCATTCAAGACACAACCTTGGG 59.703 50.000 0.00 0.00 40.88 4.12
2771 3201 3.221771 TCCATTCAAGACACAACCTTGG 58.778 45.455 0.00 0.00 40.88 3.61
2772 3202 4.279169 ACATCCATTCAAGACACAACCTTG 59.721 41.667 0.00 0.00 41.63 3.61
2773 3203 4.473444 ACATCCATTCAAGACACAACCTT 58.527 39.130 0.00 0.00 0.00 3.50
2774 3204 4.104383 ACATCCATTCAAGACACAACCT 57.896 40.909 0.00 0.00 0.00 3.50
2775 3205 5.882557 AGATACATCCATTCAAGACACAACC 59.117 40.000 0.00 0.00 0.00 3.77
2776 3206 6.992063 AGATACATCCATTCAAGACACAAC 57.008 37.500 0.00 0.00 0.00 3.32
2777 3207 6.763135 GCTAGATACATCCATTCAAGACACAA 59.237 38.462 0.00 0.00 0.00 3.33
2778 3208 6.127083 TGCTAGATACATCCATTCAAGACACA 60.127 38.462 0.00 0.00 0.00 3.72
2779 3209 6.201806 GTGCTAGATACATCCATTCAAGACAC 59.798 42.308 0.00 0.00 0.00 3.67
2780 3210 6.283694 GTGCTAGATACATCCATTCAAGACA 58.716 40.000 0.00 0.00 0.00 3.41
2781 3211 5.698545 GGTGCTAGATACATCCATTCAAGAC 59.301 44.000 0.00 0.00 0.00 3.01
2782 3212 5.366477 TGGTGCTAGATACATCCATTCAAGA 59.634 40.000 0.00 0.00 0.00 3.02
2783 3213 5.614308 TGGTGCTAGATACATCCATTCAAG 58.386 41.667 0.00 0.00 0.00 3.02
2784 3214 5.628797 TGGTGCTAGATACATCCATTCAA 57.371 39.130 0.00 0.00 0.00 2.69
2785 3215 5.628797 TTGGTGCTAGATACATCCATTCA 57.371 39.130 0.00 0.00 0.00 2.57
2786 3216 7.229306 TCAAATTGGTGCTAGATACATCCATTC 59.771 37.037 0.00 0.00 0.00 2.67
2787 3217 7.062322 TCAAATTGGTGCTAGATACATCCATT 58.938 34.615 0.00 0.00 0.00 3.16
2788 3218 6.604171 TCAAATTGGTGCTAGATACATCCAT 58.396 36.000 0.00 0.00 0.00 3.41
2789 3219 6.000246 TCAAATTGGTGCTAGATACATCCA 58.000 37.500 0.00 0.00 0.00 3.41
2790 3220 6.906659 CATCAAATTGGTGCTAGATACATCC 58.093 40.000 0.00 0.00 0.00 3.51
2802 3232 6.487668 TGGATGTATCTAGCATCAAATTGGTG 59.512 38.462 1.11 1.11 43.17 4.17
2803 3233 6.604171 TGGATGTATCTAGCATCAAATTGGT 58.396 36.000 9.99 0.00 43.17 3.67
2804 3234 7.698506 ATGGATGTATCTAGCATCAAATTGG 57.301 36.000 9.99 0.00 43.17 3.16
2805 3235 9.622004 GAAATGGATGTATCTAGCATCAAATTG 57.378 33.333 9.99 0.00 43.17 2.32
2806 3236 9.358406 TGAAATGGATGTATCTAGCATCAAATT 57.642 29.630 9.99 6.98 43.17 1.82
2807 3237 8.929260 TGAAATGGATGTATCTAGCATCAAAT 57.071 30.769 9.99 2.47 43.17 2.32
2808 3238 7.040892 GCTGAAATGGATGTATCTAGCATCAAA 60.041 37.037 9.99 0.63 43.17 2.69
2809 3239 6.429078 GCTGAAATGGATGTATCTAGCATCAA 59.571 38.462 9.99 0.98 43.17 2.57
2810 3240 5.936372 GCTGAAATGGATGTATCTAGCATCA 59.064 40.000 9.99 0.00 43.17 3.07
2811 3241 5.936372 TGCTGAAATGGATGTATCTAGCATC 59.064 40.000 0.00 1.37 41.30 3.91
2812 3242 5.872963 TGCTGAAATGGATGTATCTAGCAT 58.127 37.500 0.00 0.00 34.14 3.79
2813 3243 5.294734 TGCTGAAATGGATGTATCTAGCA 57.705 39.130 0.00 0.00 36.42 3.49
2814 3244 5.528690 TGTTGCTGAAATGGATGTATCTAGC 59.471 40.000 0.00 0.00 0.00 3.42
2815 3245 7.558161 TTGTTGCTGAAATGGATGTATCTAG 57.442 36.000 0.00 0.00 0.00 2.43
2816 3246 7.611467 AGTTTGTTGCTGAAATGGATGTATCTA 59.389 33.333 0.00 0.00 0.00 1.98
2817 3247 6.435277 AGTTTGTTGCTGAAATGGATGTATCT 59.565 34.615 0.00 0.00 0.00 1.98
2818 3248 6.624423 AGTTTGTTGCTGAAATGGATGTATC 58.376 36.000 0.00 0.00 0.00 2.24
2819 3249 6.594788 AGTTTGTTGCTGAAATGGATGTAT 57.405 33.333 0.00 0.00 0.00 2.29
2820 3250 6.403866 AAGTTTGTTGCTGAAATGGATGTA 57.596 33.333 0.00 0.00 0.00 2.29
2821 3251 4.942761 AGTTTGTTGCTGAAATGGATGT 57.057 36.364 0.00 0.00 0.00 3.06
2822 3252 6.293027 GGAAAAGTTTGTTGCTGAAATGGATG 60.293 38.462 0.00 0.00 0.00 3.51
2823 3253 5.759763 GGAAAAGTTTGTTGCTGAAATGGAT 59.240 36.000 0.00 0.00 0.00 3.41
2824 3254 5.115480 GGAAAAGTTTGTTGCTGAAATGGA 58.885 37.500 0.00 0.00 0.00 3.41
2825 3255 4.025813 CGGAAAAGTTTGTTGCTGAAATGG 60.026 41.667 0.00 0.00 0.00 3.16
2826 3256 4.025813 CCGGAAAAGTTTGTTGCTGAAATG 60.026 41.667 0.00 0.00 0.00 2.32
2827 3257 4.119136 CCGGAAAAGTTTGTTGCTGAAAT 58.881 39.130 0.00 0.00 0.00 2.17
2828 3258 3.193691 TCCGGAAAAGTTTGTTGCTGAAA 59.806 39.130 0.00 0.00 0.00 2.69
2829 3259 2.755655 TCCGGAAAAGTTTGTTGCTGAA 59.244 40.909 0.00 0.00 0.00 3.02
2830 3260 2.098443 GTCCGGAAAAGTTTGTTGCTGA 59.902 45.455 5.23 0.00 0.00 4.26
2831 3261 2.459934 GTCCGGAAAAGTTTGTTGCTG 58.540 47.619 5.23 0.00 0.00 4.41
2832 3262 1.064952 CGTCCGGAAAAGTTTGTTGCT 59.935 47.619 5.23 0.00 0.00 3.91
2833 3263 1.472990 CGTCCGGAAAAGTTTGTTGC 58.527 50.000 5.23 0.00 0.00 4.17
2834 3264 1.671845 TCCGTCCGGAAAAGTTTGTTG 59.328 47.619 5.23 0.00 42.05 3.33
2835 3265 2.041251 TCCGTCCGGAAAAGTTTGTT 57.959 45.000 5.23 0.00 42.05 2.83
2836 3266 3.784642 TCCGTCCGGAAAAGTTTGT 57.215 47.368 5.23 0.00 42.05 2.83
2846 3276 3.014623 TGCATATACTCTATCCGTCCGG 58.985 50.000 0.00 0.00 0.00 5.14
2847 3277 4.902443 ATGCATATACTCTATCCGTCCG 57.098 45.455 0.00 0.00 0.00 4.79
2848 3278 5.352284 CCAATGCATATACTCTATCCGTCC 58.648 45.833 0.00 0.00 0.00 4.79
2849 3279 5.127194 TCCCAATGCATATACTCTATCCGTC 59.873 44.000 0.00 0.00 0.00 4.79
2850 3280 5.023452 TCCCAATGCATATACTCTATCCGT 58.977 41.667 0.00 0.00 0.00 4.69
2851 3281 5.127845 ACTCCCAATGCATATACTCTATCCG 59.872 44.000 0.00 0.00 0.00 4.18
2852 3282 6.382570 AGACTCCCAATGCATATACTCTATCC 59.617 42.308 0.00 0.00 0.00 2.59
2853 3283 7.416964 AGACTCCCAATGCATATACTCTATC 57.583 40.000 0.00 0.00 0.00 2.08
2854 3284 7.563188 CCTAGACTCCCAATGCATATACTCTAT 59.437 40.741 0.00 0.00 0.00 1.98
2855 3285 6.892456 CCTAGACTCCCAATGCATATACTCTA 59.108 42.308 0.00 0.00 0.00 2.43
2856 3286 5.719085 CCTAGACTCCCAATGCATATACTCT 59.281 44.000 0.00 0.00 0.00 3.24
2857 3287 5.717178 TCCTAGACTCCCAATGCATATACTC 59.283 44.000 0.00 0.00 0.00 2.59
2858 3288 5.655394 TCCTAGACTCCCAATGCATATACT 58.345 41.667 0.00 0.00 0.00 2.12
2859 3289 6.344500 CATCCTAGACTCCCAATGCATATAC 58.656 44.000 0.00 0.00 0.00 1.47
2868 3298 2.694397 CATCCCATCCTAGACTCCCAA 58.306 52.381 0.00 0.00 0.00 4.12
2878 3308 4.210331 GACATAACAAAGCATCCCATCCT 58.790 43.478 0.00 0.00 0.00 3.24
2921 3351 4.657814 ACATGGACCAGGTTTCACTATT 57.342 40.909 5.82 0.00 0.00 1.73
2976 3406 4.374689 TGGTGCACCTATTTTGTCCTTA 57.625 40.909 34.75 8.56 36.82 2.69
3023 3453 9.460019 TGATCAATATATGTGTGGAGTTTTTCA 57.540 29.630 0.00 0.00 0.00 2.69
3054 3484 9.647797 TGTAATGAACGATTGTAAGACTATTGT 57.352 29.630 0.00 0.00 30.93 2.71
3064 3494 9.549078 TGGCTAATTATGTAATGAACGATTGTA 57.451 29.630 0.00 0.00 0.00 2.41
3065 3495 8.342634 GTGGCTAATTATGTAATGAACGATTGT 58.657 33.333 0.00 0.00 0.00 2.71
3066 3496 7.530525 CGTGGCTAATTATGTAATGAACGATTG 59.469 37.037 0.00 0.00 0.00 2.67
3067 3497 7.572759 CGTGGCTAATTATGTAATGAACGATT 58.427 34.615 0.00 0.00 0.00 3.34
3068 3498 6.347402 GCGTGGCTAATTATGTAATGAACGAT 60.347 38.462 0.00 0.00 0.00 3.73
3069 3499 5.050634 GCGTGGCTAATTATGTAATGAACGA 60.051 40.000 0.00 0.00 0.00 3.85
3070 3500 5.137403 GCGTGGCTAATTATGTAATGAACG 58.863 41.667 0.00 0.00 0.00 3.95
3071 3501 6.055231 TGCGTGGCTAATTATGTAATGAAC 57.945 37.500 0.00 0.00 0.00 3.18
3072 3502 5.238432 CCTGCGTGGCTAATTATGTAATGAA 59.762 40.000 0.00 0.00 0.00 2.57
3073 3503 4.754618 CCTGCGTGGCTAATTATGTAATGA 59.245 41.667 0.00 0.00 0.00 2.57
3074 3504 4.083324 CCCTGCGTGGCTAATTATGTAATG 60.083 45.833 0.00 0.00 0.00 1.90
3075 3505 4.072131 CCCTGCGTGGCTAATTATGTAAT 58.928 43.478 0.00 0.00 0.00 1.89
3076 3506 3.472652 CCCTGCGTGGCTAATTATGTAA 58.527 45.455 0.00 0.00 0.00 2.41
3077 3507 3.120321 CCCTGCGTGGCTAATTATGTA 57.880 47.619 0.00 0.00 0.00 2.29
3078 3508 1.967319 CCCTGCGTGGCTAATTATGT 58.033 50.000 0.00 0.00 0.00 2.29
3092 3522 0.733150 GTAATTCTGTTCCGCCCTGC 59.267 55.000 0.00 0.00 0.00 4.85
3093 3523 1.737793 GTGTAATTCTGTTCCGCCCTG 59.262 52.381 0.00 0.00 0.00 4.45
3094 3524 1.349688 TGTGTAATTCTGTTCCGCCCT 59.650 47.619 0.00 0.00 0.00 5.19
3095 3525 1.737793 CTGTGTAATTCTGTTCCGCCC 59.262 52.381 0.00 0.00 0.00 6.13
3096 3526 2.423577 ACTGTGTAATTCTGTTCCGCC 58.576 47.619 0.00 0.00 0.00 6.13
3097 3527 5.233689 GGTATACTGTGTAATTCTGTTCCGC 59.766 44.000 2.25 0.00 0.00 5.54
3098 3528 6.334989 TGGTATACTGTGTAATTCTGTTCCG 58.665 40.000 2.25 0.00 0.00 4.30
3099 3529 8.612619 CAATGGTATACTGTGTAATTCTGTTCC 58.387 37.037 2.25 0.00 0.00 3.62
3100 3530 8.612619 CCAATGGTATACTGTGTAATTCTGTTC 58.387 37.037 2.25 0.00 0.00 3.18
3101 3531 8.325787 TCCAATGGTATACTGTGTAATTCTGTT 58.674 33.333 0.00 0.00 0.00 3.16
3102 3532 7.769044 GTCCAATGGTATACTGTGTAATTCTGT 59.231 37.037 0.00 0.00 0.00 3.41
3103 3533 7.768582 TGTCCAATGGTATACTGTGTAATTCTG 59.231 37.037 0.00 0.00 0.00 3.02
3104 3534 7.857456 TGTCCAATGGTATACTGTGTAATTCT 58.143 34.615 0.00 0.00 0.00 2.40
3105 3535 8.559536 CATGTCCAATGGTATACTGTGTAATTC 58.440 37.037 0.00 0.00 0.00 2.17
3106 3536 7.013274 GCATGTCCAATGGTATACTGTGTAATT 59.987 37.037 0.00 0.00 0.00 1.40
3107 3537 6.486657 GCATGTCCAATGGTATACTGTGTAAT 59.513 38.462 0.00 0.00 0.00 1.89
3108 3538 5.820423 GCATGTCCAATGGTATACTGTGTAA 59.180 40.000 0.00 0.00 0.00 2.41
3109 3539 5.130311 AGCATGTCCAATGGTATACTGTGTA 59.870 40.000 0.00 0.00 0.00 2.90
3110 3540 4.080356 AGCATGTCCAATGGTATACTGTGT 60.080 41.667 0.00 0.00 0.00 3.72
3111 3541 4.454678 AGCATGTCCAATGGTATACTGTG 58.545 43.478 0.00 0.00 0.00 3.66
3112 3542 4.778213 AGCATGTCCAATGGTATACTGT 57.222 40.909 0.00 0.00 0.00 3.55
3113 3543 6.466812 TGATAGCATGTCCAATGGTATACTG 58.533 40.000 9.36 0.00 41.20 2.74
3114 3544 6.686484 TGATAGCATGTCCAATGGTATACT 57.314 37.500 9.36 0.00 41.20 2.12
3115 3545 7.744087 TTTGATAGCATGTCCAATGGTATAC 57.256 36.000 9.36 0.00 41.20 1.47
3116 3546 7.998383 AGTTTTGATAGCATGTCCAATGGTATA 59.002 33.333 9.36 0.00 41.20 1.47
3117 3547 6.835488 AGTTTTGATAGCATGTCCAATGGTAT 59.165 34.615 9.20 9.20 43.05 2.73
3118 3548 6.186957 AGTTTTGATAGCATGTCCAATGGTA 58.813 36.000 0.00 0.24 36.58 3.25
3119 3549 5.018809 AGTTTTGATAGCATGTCCAATGGT 58.981 37.500 0.00 0.00 0.00 3.55
3120 3550 5.587388 AGTTTTGATAGCATGTCCAATGG 57.413 39.130 0.00 0.00 0.00 3.16
3121 3551 9.590451 AATTTAGTTTTGATAGCATGTCCAATG 57.410 29.630 0.00 0.00 0.00 2.82
3123 3553 9.995003 AAAATTTAGTTTTGATAGCATGTCCAA 57.005 25.926 0.00 0.00 38.56 3.53
3137 3567 9.143631 GTGCATGAGATAGCAAAATTTAGTTTT 57.856 29.630 0.00 0.00 43.20 2.43
3138 3568 7.761249 GGTGCATGAGATAGCAAAATTTAGTTT 59.239 33.333 0.00 0.00 43.20 2.66
3139 3569 7.260603 GGTGCATGAGATAGCAAAATTTAGTT 58.739 34.615 0.00 0.00 43.20 2.24
3140 3570 6.458751 CGGTGCATGAGATAGCAAAATTTAGT 60.459 38.462 0.00 0.00 43.20 2.24
3141 3571 5.911280 CGGTGCATGAGATAGCAAAATTTAG 59.089 40.000 0.00 0.00 43.20 1.85
3142 3572 5.733091 GCGGTGCATGAGATAGCAAAATTTA 60.733 40.000 0.00 0.00 43.20 1.40
3143 3573 4.675510 CGGTGCATGAGATAGCAAAATTT 58.324 39.130 0.00 0.00 43.20 1.82
3144 3574 3.489738 GCGGTGCATGAGATAGCAAAATT 60.490 43.478 0.00 0.00 43.20 1.82
3145 3575 2.033801 GCGGTGCATGAGATAGCAAAAT 59.966 45.455 0.00 0.00 43.20 1.82
3146 3576 1.401552 GCGGTGCATGAGATAGCAAAA 59.598 47.619 0.00 0.00 43.20 2.44
3147 3577 1.016627 GCGGTGCATGAGATAGCAAA 58.983 50.000 0.00 0.00 43.20 3.68
3148 3578 0.815213 GGCGGTGCATGAGATAGCAA 60.815 55.000 0.00 0.00 43.20 3.91
3149 3579 1.227645 GGCGGTGCATGAGATAGCA 60.228 57.895 0.00 0.00 38.65 3.49
3150 3580 0.533755 AAGGCGGTGCATGAGATAGC 60.534 55.000 0.00 0.00 0.00 2.97
3151 3581 1.224075 CAAGGCGGTGCATGAGATAG 58.776 55.000 0.00 0.00 0.00 2.08
3152 3582 0.541392 ACAAGGCGGTGCATGAGATA 59.459 50.000 0.00 0.00 0.00 1.98
3153 3583 0.322816 AACAAGGCGGTGCATGAGAT 60.323 50.000 0.00 0.00 0.00 2.75
3154 3584 0.323302 TAACAAGGCGGTGCATGAGA 59.677 50.000 0.00 0.00 0.00 3.27
3155 3585 0.729116 CTAACAAGGCGGTGCATGAG 59.271 55.000 0.00 0.00 0.00 2.90
3156 3586 1.305219 GCTAACAAGGCGGTGCATGA 61.305 55.000 0.00 0.00 0.00 3.07
3157 3587 1.137404 GCTAACAAGGCGGTGCATG 59.863 57.895 0.00 0.00 0.00 4.06
3158 3588 2.046285 GGCTAACAAGGCGGTGCAT 61.046 57.895 0.00 0.00 0.00 3.96
3159 3589 2.671619 GGCTAACAAGGCGGTGCA 60.672 61.111 0.00 0.00 0.00 4.57
3160 3590 2.359975 AGGCTAACAAGGCGGTGC 60.360 61.111 0.00 0.00 39.53 5.01
3161 3591 2.690778 GCAGGCTAACAAGGCGGTG 61.691 63.158 0.00 0.00 39.53 4.94
3162 3592 2.359975 GCAGGCTAACAAGGCGGT 60.360 61.111 0.00 0.00 39.53 5.68
3163 3593 2.252072 TAGGCAGGCTAACAAGGCGG 62.252 60.000 0.00 0.00 39.53 6.13
3164 3594 0.179045 ATAGGCAGGCTAACAAGGCG 60.179 55.000 7.96 0.00 39.53 5.52
3165 3595 1.134098 TGATAGGCAGGCTAACAAGGC 60.134 52.381 11.13 0.00 0.00 4.35
3166 3596 3.281727 TTGATAGGCAGGCTAACAAGG 57.718 47.619 19.24 0.00 0.00 3.61
3167 3597 4.712476 AGATTGATAGGCAGGCTAACAAG 58.288 43.478 24.81 0.00 0.00 3.16
3168 3598 4.778213 AGATTGATAGGCAGGCTAACAA 57.222 40.909 23.56 23.56 0.00 2.83
3169 3599 4.778213 AAGATTGATAGGCAGGCTAACA 57.222 40.909 7.96 8.89 0.00 2.41
3170 3600 6.055588 TGTTAAGATTGATAGGCAGGCTAAC 58.944 40.000 7.96 6.04 0.00 2.34
3171 3601 6.247229 TGTTAAGATTGATAGGCAGGCTAA 57.753 37.500 7.96 0.00 0.00 3.09
3172 3602 5.887214 TGTTAAGATTGATAGGCAGGCTA 57.113 39.130 6.10 6.10 0.00 3.93
3173 3603 4.778213 TGTTAAGATTGATAGGCAGGCT 57.222 40.909 0.38 0.38 0.00 4.58
3174 3604 5.767168 AGATTGTTAAGATTGATAGGCAGGC 59.233 40.000 0.00 0.00 0.00 4.85
3175 3605 7.500227 TCAAGATTGTTAAGATTGATAGGCAGG 59.500 37.037 0.00 0.00 0.00 4.85
3176 3606 8.442632 TCAAGATTGTTAAGATTGATAGGCAG 57.557 34.615 0.00 0.00 0.00 4.85
3177 3607 8.267183 TCTCAAGATTGTTAAGATTGATAGGCA 58.733 33.333 0.00 0.00 30.13 4.75
3178 3608 8.668510 TCTCAAGATTGTTAAGATTGATAGGC 57.331 34.615 0.00 0.00 30.13 3.93
3183 3613 9.506018 TGTTGATCTCAAGATTGTTAAGATTGA 57.494 29.630 0.00 0.00 36.39 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.