Multiple sequence alignment - TraesCS3D01G149000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G149000 chr3D 100.000 2795 0 0 1 2795 114074066 114076860 0.000000e+00 5162.0
1 TraesCS3D01G149000 chr3D 87.912 91 8 2 598 688 589151823 589151736 1.370000e-18 104.0
2 TraesCS3D01G149000 chr3B 92.862 1429 47 17 684 2063 166716071 166714649 0.000000e+00 2023.0
3 TraesCS3D01G149000 chr3B 86.556 781 47 29 2062 2795 166714601 166713832 0.000000e+00 808.0
4 TraesCS3D01G149000 chr3B 85.616 438 55 8 54 486 747555661 747555227 1.180000e-123 453.0
5 TraesCS3D01G149000 chr3B 100.000 34 0 0 567 600 166716103 166716070 2.320000e-06 63.9
6 TraesCS3D01G149000 chr3A 92.904 1226 47 16 684 1871 109867893 109869116 0.000000e+00 1746.0
7 TraesCS3D01G149000 chr3A 87.954 523 48 11 2274 2786 109869317 109869834 1.110000e-168 603.0
8 TraesCS3D01G149000 chr3A 84.631 488 62 10 1 481 729610371 729610852 9.060000e-130 473.0
9 TraesCS3D01G149000 chr3A 86.192 449 46 14 59 500 737647033 737647472 3.260000e-129 472.0
10 TraesCS3D01G149000 chr3A 90.000 150 10 2 1918 2062 109869120 109869269 3.680000e-44 189.0
11 TraesCS3D01G149000 chr3A 90.909 88 6 2 598 685 587969320 587969405 1.760000e-22 117.0
12 TraesCS3D01G149000 chr7B 84.254 489 68 8 1 483 63002911 63003396 4.220000e-128 468.0
13 TraesCS3D01G149000 chr6A 87.105 411 43 10 79 482 7711301 7710894 9.120000e-125 457.0
14 TraesCS3D01G149000 chr2A 86.183 427 53 6 59 482 31688851 31689274 9.120000e-125 457.0
15 TraesCS3D01G149000 chr2A 86.073 438 46 15 55 482 778445430 778444998 9.120000e-125 457.0
16 TraesCS3D01G149000 chr2A 84.922 451 56 12 59 502 80906204 80906649 1.980000e-121 446.0
17 TraesCS3D01G149000 chr2A 89.655 87 7 1 599 685 14568173 14568089 2.940000e-20 110.0
18 TraesCS3D01G149000 chr2A 88.636 88 8 2 598 685 339089973 339090058 3.810000e-19 106.0
19 TraesCS3D01G149000 chr1A 86.047 430 52 8 59 482 514877986 514878413 3.280000e-124 455.0
20 TraesCS3D01G149000 chr6B 93.578 109 7 0 1066 1174 10902561 10902669 2.230000e-36 163.0
21 TraesCS3D01G149000 chr6B 91.589 107 8 1 1068 1174 10937317 10937212 2.240000e-31 147.0
22 TraesCS3D01G149000 chr5A 90.385 104 10 0 1066 1169 528481094 528480991 1.350000e-28 137.0
23 TraesCS3D01G149000 chr5A 78.000 100 20 2 599 698 577923283 577923186 8.360000e-06 62.1
24 TraesCS3D01G149000 chr7A 92.308 91 3 3 596 685 56727788 56727701 2.920000e-25 126.0
25 TraesCS3D01G149000 chr1B 91.011 89 4 2 599 685 49636719 49636633 1.760000e-22 117.0
26 TraesCS3D01G149000 chr5B 90.805 87 6 2 599 685 173565351 173565267 6.330000e-22 115.0
27 TraesCS3D01G149000 chr2B 88.889 90 5 3 598 685 661193528 661193442 3.810000e-19 106.0
28 TraesCS3D01G149000 chr2B 85.714 98 11 3 597 693 408297676 408297771 1.770000e-17 100.0
29 TraesCS3D01G149000 chr1D 88.679 53 4 2 653 703 176392011 176391959 2.320000e-06 63.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G149000 chr3D 114074066 114076860 2794 False 5162.000000 5162 100.000000 1 2795 1 chr3D.!!$F1 2794
1 TraesCS3D01G149000 chr3B 166713832 166716103 2271 True 964.966667 2023 93.139333 567 2795 3 chr3B.!!$R2 2228
2 TraesCS3D01G149000 chr3A 109867893 109869834 1941 False 846.000000 1746 90.286000 684 2786 3 chr3A.!!$F4 2102

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
84 85 0.033503 TCTACATCCACAGCCTCCGA 60.034 55.0 0.0 0.0 0.00 4.55 F
179 180 0.033504 ACAAGCACGACACCGAGATT 59.966 50.0 0.0 0.0 35.55 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1755 1796 0.247460 TGGTGTCGAAGAGCATCCAG 59.753 55.0 0.00 0.00 36.95 3.86 R
2139 2265 0.108898 CCAAGAGAGAGTGCAGTCGG 60.109 60.0 15.76 6.23 0.00 4.79 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
27 28 3.197790 CCGGCGACATGCTTCCTG 61.198 66.667 9.30 0.00 45.43 3.86
28 29 2.434884 CGGCGACATGCTTCCTGT 60.435 61.111 0.00 0.00 45.43 4.00
29 30 2.743752 CGGCGACATGCTTCCTGTG 61.744 63.158 0.00 0.00 45.43 3.66
30 31 1.375908 GGCGACATGCTTCCTGTGA 60.376 57.895 0.00 0.00 45.43 3.58
31 32 0.955428 GGCGACATGCTTCCTGTGAA 60.955 55.000 0.00 0.00 45.43 3.18
32 33 0.166814 GCGACATGCTTCCTGTGAAC 59.833 55.000 0.00 0.00 41.73 3.18
33 34 1.511850 CGACATGCTTCCTGTGAACA 58.488 50.000 0.00 0.00 0.00 3.18
34 35 1.872952 CGACATGCTTCCTGTGAACAA 59.127 47.619 0.00 0.00 0.00 2.83
35 36 2.349817 CGACATGCTTCCTGTGAACAAC 60.350 50.000 0.00 0.00 0.00 3.32
36 37 1.956477 ACATGCTTCCTGTGAACAACC 59.044 47.619 0.00 0.00 0.00 3.77
37 38 2.233271 CATGCTTCCTGTGAACAACCT 58.767 47.619 0.00 0.00 0.00 3.50
38 39 2.435372 TGCTTCCTGTGAACAACCTT 57.565 45.000 0.00 0.00 0.00 3.50
39 40 2.023673 TGCTTCCTGTGAACAACCTTG 58.976 47.619 0.00 0.00 0.00 3.61
40 41 2.297701 GCTTCCTGTGAACAACCTTGA 58.702 47.619 0.00 0.00 0.00 3.02
41 42 2.887152 GCTTCCTGTGAACAACCTTGAT 59.113 45.455 0.00 0.00 0.00 2.57
42 43 3.057946 GCTTCCTGTGAACAACCTTGATC 60.058 47.826 0.00 0.00 0.00 2.92
43 44 3.140325 TCCTGTGAACAACCTTGATCC 57.860 47.619 0.00 0.00 0.00 3.36
44 45 2.441375 TCCTGTGAACAACCTTGATCCA 59.559 45.455 0.00 0.00 0.00 3.41
45 46 3.117701 TCCTGTGAACAACCTTGATCCAA 60.118 43.478 0.00 0.00 0.00 3.53
46 47 3.254166 CCTGTGAACAACCTTGATCCAAG 59.746 47.826 0.00 0.00 40.75 3.61
47 48 2.622942 TGTGAACAACCTTGATCCAAGC 59.377 45.455 1.39 0.00 39.85 4.01
48 49 2.029918 GTGAACAACCTTGATCCAAGCC 60.030 50.000 1.39 0.00 39.85 4.35
49 50 1.200020 GAACAACCTTGATCCAAGCCG 59.800 52.381 1.39 0.00 39.85 5.52
50 51 0.400213 ACAACCTTGATCCAAGCCGA 59.600 50.000 1.39 0.00 39.85 5.54
51 52 1.089920 CAACCTTGATCCAAGCCGAG 58.910 55.000 1.39 0.00 39.85 4.63
52 53 0.678048 AACCTTGATCCAAGCCGAGC 60.678 55.000 1.39 0.00 39.85 5.03
53 54 1.222936 CCTTGATCCAAGCCGAGCT 59.777 57.895 0.00 0.00 42.56 4.09
67 68 4.837972 AGCCGAGCTTTTTCTTTAGATCT 58.162 39.130 0.00 0.00 33.89 2.75
68 69 5.978814 AGCCGAGCTTTTTCTTTAGATCTA 58.021 37.500 0.00 0.00 33.89 1.98
69 70 5.813157 AGCCGAGCTTTTTCTTTAGATCTAC 59.187 40.000 0.67 0.00 33.89 2.59
70 71 5.581085 GCCGAGCTTTTTCTTTAGATCTACA 59.419 40.000 0.67 0.00 0.00 2.74
71 72 6.258947 GCCGAGCTTTTTCTTTAGATCTACAT 59.741 38.462 0.67 0.00 0.00 2.29
72 73 7.517575 GCCGAGCTTTTTCTTTAGATCTACATC 60.518 40.741 0.67 0.00 0.00 3.06
73 74 7.042389 CCGAGCTTTTTCTTTAGATCTACATCC 60.042 40.741 0.67 0.00 0.00 3.51
74 75 7.492669 CGAGCTTTTTCTTTAGATCTACATCCA 59.507 37.037 0.67 0.00 0.00 3.41
75 76 8.499403 AGCTTTTTCTTTAGATCTACATCCAC 57.501 34.615 0.67 0.00 0.00 4.02
76 77 8.103305 AGCTTTTTCTTTAGATCTACATCCACA 58.897 33.333 0.67 0.00 0.00 4.17
77 78 8.394121 GCTTTTTCTTTAGATCTACATCCACAG 58.606 37.037 0.67 0.00 0.00 3.66
78 79 7.849804 TTTTCTTTAGATCTACATCCACAGC 57.150 36.000 0.67 0.00 0.00 4.40
79 80 5.537300 TCTTTAGATCTACATCCACAGCC 57.463 43.478 0.67 0.00 0.00 4.85
80 81 5.211973 TCTTTAGATCTACATCCACAGCCT 58.788 41.667 0.67 0.00 0.00 4.58
81 82 5.303078 TCTTTAGATCTACATCCACAGCCTC 59.697 44.000 0.67 0.00 0.00 4.70
82 83 2.324541 AGATCTACATCCACAGCCTCC 58.675 52.381 0.00 0.00 0.00 4.30
83 84 1.000283 GATCTACATCCACAGCCTCCG 60.000 57.143 0.00 0.00 0.00 4.63
84 85 0.033503 TCTACATCCACAGCCTCCGA 60.034 55.000 0.00 0.00 0.00 4.55
85 86 0.824109 CTACATCCACAGCCTCCGAA 59.176 55.000 0.00 0.00 0.00 4.30
86 87 0.535335 TACATCCACAGCCTCCGAAC 59.465 55.000 0.00 0.00 0.00 3.95
87 88 1.296392 CATCCACAGCCTCCGAACA 59.704 57.895 0.00 0.00 0.00 3.18
88 89 0.321564 CATCCACAGCCTCCGAACAA 60.322 55.000 0.00 0.00 0.00 2.83
89 90 0.321653 ATCCACAGCCTCCGAACAAC 60.322 55.000 0.00 0.00 0.00 3.32
90 91 1.966451 CCACAGCCTCCGAACAACC 60.966 63.158 0.00 0.00 0.00 3.77
91 92 1.071471 CACAGCCTCCGAACAACCT 59.929 57.895 0.00 0.00 0.00 3.50
92 93 0.320374 CACAGCCTCCGAACAACCTA 59.680 55.000 0.00 0.00 0.00 3.08
93 94 1.053424 ACAGCCTCCGAACAACCTAA 58.947 50.000 0.00 0.00 0.00 2.69
94 95 1.270678 ACAGCCTCCGAACAACCTAAC 60.271 52.381 0.00 0.00 0.00 2.34
95 96 1.002087 CAGCCTCCGAACAACCTAACT 59.998 52.381 0.00 0.00 0.00 2.24
96 97 1.275573 AGCCTCCGAACAACCTAACTC 59.724 52.381 0.00 0.00 0.00 3.01
97 98 1.001633 GCCTCCGAACAACCTAACTCA 59.998 52.381 0.00 0.00 0.00 3.41
98 99 2.354805 GCCTCCGAACAACCTAACTCAT 60.355 50.000 0.00 0.00 0.00 2.90
99 100 3.262420 CCTCCGAACAACCTAACTCATG 58.738 50.000 0.00 0.00 0.00 3.07
100 101 3.056107 CCTCCGAACAACCTAACTCATGA 60.056 47.826 0.00 0.00 0.00 3.07
101 102 4.383118 CCTCCGAACAACCTAACTCATGAT 60.383 45.833 0.00 0.00 0.00 2.45
102 103 5.163447 CCTCCGAACAACCTAACTCATGATA 60.163 44.000 0.00 0.00 0.00 2.15
103 104 5.657474 TCCGAACAACCTAACTCATGATAC 58.343 41.667 0.00 0.00 0.00 2.24
104 105 4.809426 CCGAACAACCTAACTCATGATACC 59.191 45.833 0.00 0.00 0.00 2.73
105 106 5.416083 CGAACAACCTAACTCATGATACCA 58.584 41.667 0.00 0.00 0.00 3.25
106 107 6.049149 CGAACAACCTAACTCATGATACCAT 58.951 40.000 0.00 0.00 0.00 3.55
107 108 6.538742 CGAACAACCTAACTCATGATACCATT 59.461 38.462 0.00 0.00 0.00 3.16
108 109 7.065803 CGAACAACCTAACTCATGATACCATTT 59.934 37.037 0.00 0.00 0.00 2.32
109 110 7.630242 ACAACCTAACTCATGATACCATTTG 57.370 36.000 0.00 0.00 0.00 2.32
110 111 7.175104 ACAACCTAACTCATGATACCATTTGT 58.825 34.615 0.00 0.12 0.00 2.83
111 112 7.669722 ACAACCTAACTCATGATACCATTTGTT 59.330 33.333 0.00 0.00 33.34 2.83
112 113 9.173021 CAACCTAACTCATGATACCATTTGTTA 57.827 33.333 0.00 0.00 32.06 2.41
113 114 8.964476 ACCTAACTCATGATACCATTTGTTAG 57.036 34.615 15.26 15.26 40.69 2.34
114 115 8.768397 ACCTAACTCATGATACCATTTGTTAGA 58.232 33.333 20.39 0.00 41.84 2.10
115 116 9.613428 CCTAACTCATGATACCATTTGTTAGAA 57.387 33.333 20.39 0.00 41.84 2.10
128 129 8.184192 ACCATTTGTTAGAATTAATCTGAAGCG 58.816 33.333 0.00 0.00 39.30 4.68
129 130 7.166473 CCATTTGTTAGAATTAATCTGAAGCGC 59.834 37.037 0.00 0.00 39.30 5.92
130 131 6.735678 TTGTTAGAATTAATCTGAAGCGCA 57.264 33.333 11.47 0.00 39.30 6.09
131 132 6.735678 TGTTAGAATTAATCTGAAGCGCAA 57.264 33.333 11.47 0.00 39.30 4.85
132 133 6.775088 TGTTAGAATTAATCTGAAGCGCAAG 58.225 36.000 11.47 4.01 39.30 4.01
133 134 6.371548 TGTTAGAATTAATCTGAAGCGCAAGT 59.628 34.615 11.47 0.00 39.30 3.16
134 135 5.476752 AGAATTAATCTGAAGCGCAAGTC 57.523 39.130 11.47 4.25 36.88 3.01
135 136 3.933155 ATTAATCTGAAGCGCAAGTCG 57.067 42.857 11.47 1.05 42.12 4.18
136 137 2.647529 TAATCTGAAGCGCAAGTCGA 57.352 45.000 11.47 6.48 41.67 4.20
137 138 2.015736 AATCTGAAGCGCAAGTCGAT 57.984 45.000 11.47 8.42 41.67 3.59
138 139 1.565305 ATCTGAAGCGCAAGTCGATC 58.435 50.000 11.47 0.00 41.67 3.69
139 140 0.528017 TCTGAAGCGCAAGTCGATCT 59.472 50.000 11.47 0.00 41.67 2.75
140 141 1.743394 TCTGAAGCGCAAGTCGATCTA 59.257 47.619 11.47 0.00 41.67 1.98
141 142 2.359214 TCTGAAGCGCAAGTCGATCTAT 59.641 45.455 11.47 0.00 41.67 1.98
142 143 2.723658 CTGAAGCGCAAGTCGATCTATC 59.276 50.000 11.47 0.00 41.67 2.08
143 144 1.711298 GAAGCGCAAGTCGATCTATCG 59.289 52.381 11.47 6.01 45.02 2.92
158 159 5.718146 GATCTATCGAGGATCAAGCAATCA 58.282 41.667 19.69 0.00 39.30 2.57
159 160 4.876125 TCTATCGAGGATCAAGCAATCAC 58.124 43.478 0.00 0.00 33.17 3.06
160 161 3.548745 ATCGAGGATCAAGCAATCACA 57.451 42.857 0.00 0.00 33.17 3.58
161 162 2.621338 TCGAGGATCAAGCAATCACAC 58.379 47.619 0.00 0.00 33.17 3.82
162 163 2.028203 TCGAGGATCAAGCAATCACACA 60.028 45.455 0.00 0.00 33.17 3.72
163 164 2.743664 CGAGGATCAAGCAATCACACAA 59.256 45.455 0.00 0.00 33.17 3.33
164 165 3.181513 CGAGGATCAAGCAATCACACAAG 60.182 47.826 0.00 0.00 33.17 3.16
165 166 2.490903 AGGATCAAGCAATCACACAAGC 59.509 45.455 0.00 0.00 0.00 4.01
166 167 2.229543 GGATCAAGCAATCACACAAGCA 59.770 45.455 0.00 0.00 0.00 3.91
167 168 2.780065 TCAAGCAATCACACAAGCAC 57.220 45.000 0.00 0.00 0.00 4.40
168 169 1.002576 TCAAGCAATCACACAAGCACG 60.003 47.619 0.00 0.00 0.00 5.34
169 170 1.002576 CAAGCAATCACACAAGCACGA 60.003 47.619 0.00 0.00 0.00 4.35
170 171 0.588252 AGCAATCACACAAGCACGAC 59.412 50.000 0.00 0.00 0.00 4.34
171 172 0.307453 GCAATCACACAAGCACGACA 59.693 50.000 0.00 0.00 0.00 4.35
172 173 1.921573 GCAATCACACAAGCACGACAC 60.922 52.381 0.00 0.00 0.00 3.67
173 174 0.944386 AATCACACAAGCACGACACC 59.056 50.000 0.00 0.00 0.00 4.16
174 175 1.221466 ATCACACAAGCACGACACCG 61.221 55.000 0.00 0.00 42.50 4.94
175 176 1.880796 CACACAAGCACGACACCGA 60.881 57.895 0.00 0.00 39.50 4.69
176 177 1.591594 ACACAAGCACGACACCGAG 60.592 57.895 0.00 0.00 39.50 4.63
177 178 1.299850 CACAAGCACGACACCGAGA 60.300 57.895 0.00 0.00 39.50 4.04
178 179 0.667487 CACAAGCACGACACCGAGAT 60.667 55.000 0.00 0.00 39.50 2.75
179 180 0.033504 ACAAGCACGACACCGAGATT 59.966 50.000 0.00 0.00 35.55 2.40
180 181 1.148310 CAAGCACGACACCGAGATTT 58.852 50.000 0.00 0.00 33.11 2.17
181 182 1.136252 CAAGCACGACACCGAGATTTG 60.136 52.381 0.00 0.00 33.11 2.32
182 183 0.033504 AGCACGACACCGAGATTTGT 59.966 50.000 0.00 0.00 39.50 2.83
183 184 0.865769 GCACGACACCGAGATTTGTT 59.134 50.000 0.00 0.00 39.50 2.83
184 185 2.063266 GCACGACACCGAGATTTGTTA 58.937 47.619 0.00 0.00 39.50 2.41
185 186 2.477375 GCACGACACCGAGATTTGTTAA 59.523 45.455 0.00 0.00 39.50 2.01
186 187 3.663493 GCACGACACCGAGATTTGTTAAC 60.663 47.826 0.00 0.00 39.50 2.01
187 188 2.727798 ACGACACCGAGATTTGTTAACG 59.272 45.455 0.26 0.00 39.50 3.18
188 189 2.981805 CGACACCGAGATTTGTTAACGA 59.018 45.455 0.26 0.00 38.22 3.85
189 190 3.059044 CGACACCGAGATTTGTTAACGAG 59.941 47.826 0.26 0.00 38.22 4.18
190 191 3.323243 ACACCGAGATTTGTTAACGAGG 58.677 45.455 0.26 0.00 0.00 4.63
191 192 3.243975 ACACCGAGATTTGTTAACGAGGT 60.244 43.478 0.26 0.00 0.00 3.85
192 193 3.744426 CACCGAGATTTGTTAACGAGGTT 59.256 43.478 0.26 0.00 0.00 3.50
193 194 3.992427 ACCGAGATTTGTTAACGAGGTTC 59.008 43.478 0.26 0.00 0.00 3.62
194 195 3.991773 CCGAGATTTGTTAACGAGGTTCA 59.008 43.478 0.26 0.00 0.00 3.18
195 196 4.143179 CCGAGATTTGTTAACGAGGTTCAC 60.143 45.833 0.26 0.00 0.00 3.18
196 197 4.143179 CGAGATTTGTTAACGAGGTTCACC 60.143 45.833 0.26 0.00 0.00 4.02
197 198 3.744426 AGATTTGTTAACGAGGTTCACCG 59.256 43.478 0.26 0.00 42.08 4.94
198 199 2.886862 TTGTTAACGAGGTTCACCGA 57.113 45.000 0.26 0.00 42.08 4.69
199 200 3.389925 TTGTTAACGAGGTTCACCGAT 57.610 42.857 0.26 0.00 42.08 4.18
200 201 2.679450 TGTTAACGAGGTTCACCGATG 58.321 47.619 0.26 0.00 42.08 3.84
201 202 2.036217 TGTTAACGAGGTTCACCGATGT 59.964 45.455 0.26 0.00 42.08 3.06
202 203 2.357327 TAACGAGGTTCACCGATGTG 57.643 50.000 0.00 0.00 44.18 3.21
203 204 0.320421 AACGAGGTTCACCGATGTGG 60.320 55.000 0.00 0.00 42.98 4.17
204 205 2.100631 CGAGGTTCACCGATGTGGC 61.101 63.158 0.00 0.00 43.94 5.01
205 206 1.296715 GAGGTTCACCGATGTGGCT 59.703 57.895 0.00 0.00 43.94 4.75
206 207 0.535335 GAGGTTCACCGATGTGGCTA 59.465 55.000 0.00 0.00 43.94 3.93
207 208 0.249398 AGGTTCACCGATGTGGCTAC 59.751 55.000 0.00 0.00 43.94 3.58
208 209 0.036765 GGTTCACCGATGTGGCTACA 60.037 55.000 4.99 4.99 43.94 2.74
216 217 3.223946 ATGTGGCTACATCTCCGGA 57.776 52.632 10.30 2.93 44.00 5.14
217 218 1.043816 ATGTGGCTACATCTCCGGAG 58.956 55.000 26.32 26.32 44.00 4.63
218 219 1.068250 GTGGCTACATCTCCGGAGC 59.932 63.158 27.39 14.69 0.00 4.70
220 221 3.863606 GCTACATCTCCGGAGCCT 58.136 61.111 27.39 13.51 0.00 4.58
221 222 3.037941 GCTACATCTCCGGAGCCTA 57.962 57.895 27.39 10.50 0.00 3.93
222 223 1.329256 GCTACATCTCCGGAGCCTAA 58.671 55.000 27.39 10.08 0.00 2.69
223 224 1.000052 GCTACATCTCCGGAGCCTAAC 60.000 57.143 27.39 10.28 0.00 2.34
224 225 2.588620 CTACATCTCCGGAGCCTAACT 58.411 52.381 27.39 7.75 0.00 2.24
225 226 2.750141 ACATCTCCGGAGCCTAACTA 57.250 50.000 27.39 8.01 0.00 2.24
226 227 2.308690 ACATCTCCGGAGCCTAACTAC 58.691 52.381 27.39 0.00 0.00 2.73
234 235 2.279318 GCCTAACTACGGGCGCTC 60.279 66.667 7.64 0.06 38.91 5.03
235 236 2.416260 CCTAACTACGGGCGCTCC 59.584 66.667 7.64 6.04 0.00 4.70
236 237 2.125961 CCTAACTACGGGCGCTCCT 61.126 63.158 7.64 0.00 0.00 3.69
237 238 1.359475 CTAACTACGGGCGCTCCTC 59.641 63.158 7.64 0.00 0.00 3.71
238 239 2.073037 CTAACTACGGGCGCTCCTCC 62.073 65.000 7.64 0.00 0.00 4.30
245 246 3.797353 GGCGCTCCTCCCCATGAA 61.797 66.667 7.64 0.00 0.00 2.57
246 247 2.272146 GCGCTCCTCCCCATGAAA 59.728 61.111 0.00 0.00 0.00 2.69
247 248 2.115291 GCGCTCCTCCCCATGAAAC 61.115 63.158 0.00 0.00 0.00 2.78
248 249 1.452108 CGCTCCTCCCCATGAAACC 60.452 63.158 0.00 0.00 0.00 3.27
249 250 1.452108 GCTCCTCCCCATGAAACCG 60.452 63.158 0.00 0.00 0.00 4.44
250 251 1.452108 CTCCTCCCCATGAAACCGC 60.452 63.158 0.00 0.00 0.00 5.68
251 252 1.915078 CTCCTCCCCATGAAACCGCT 61.915 60.000 0.00 0.00 0.00 5.52
252 253 0.619255 TCCTCCCCATGAAACCGCTA 60.619 55.000 0.00 0.00 0.00 4.26
253 254 0.463833 CCTCCCCATGAAACCGCTAC 60.464 60.000 0.00 0.00 0.00 3.58
254 255 0.251916 CTCCCCATGAAACCGCTACA 59.748 55.000 0.00 0.00 0.00 2.74
255 256 0.693622 TCCCCATGAAACCGCTACAA 59.306 50.000 0.00 0.00 0.00 2.41
256 257 1.283613 TCCCCATGAAACCGCTACAAT 59.716 47.619 0.00 0.00 0.00 2.71
257 258 2.506231 TCCCCATGAAACCGCTACAATA 59.494 45.455 0.00 0.00 0.00 1.90
258 259 2.616842 CCCCATGAAACCGCTACAATAC 59.383 50.000 0.00 0.00 0.00 1.89
259 260 2.616842 CCCATGAAACCGCTACAATACC 59.383 50.000 0.00 0.00 0.00 2.73
260 261 2.286833 CCATGAAACCGCTACAATACCG 59.713 50.000 0.00 0.00 0.00 4.02
261 262 1.361793 TGAAACCGCTACAATACCGC 58.638 50.000 0.00 0.00 0.00 5.68
262 263 1.337917 TGAAACCGCTACAATACCGCA 60.338 47.619 0.00 0.00 0.00 5.69
263 264 1.061566 GAAACCGCTACAATACCGCAC 59.938 52.381 0.00 0.00 0.00 5.34
264 265 0.741927 AACCGCTACAATACCGCACC 60.742 55.000 0.00 0.00 0.00 5.01
265 266 1.885850 CCGCTACAATACCGCACCC 60.886 63.158 0.00 0.00 0.00 4.61
266 267 1.885850 CGCTACAATACCGCACCCC 60.886 63.158 0.00 0.00 0.00 4.95
267 268 1.885850 GCTACAATACCGCACCCCG 60.886 63.158 0.00 0.00 0.00 5.73
321 322 2.583868 CGCGTGCCCGTGCTATTA 60.584 61.111 0.00 0.00 37.82 0.98
322 323 2.867091 CGCGTGCCCGTGCTATTAC 61.867 63.158 0.00 0.00 37.82 1.89
323 324 1.812093 GCGTGCCCGTGCTATTACA 60.812 57.895 0.00 0.00 38.71 2.41
324 325 1.157870 GCGTGCCCGTGCTATTACAT 61.158 55.000 0.00 0.00 38.71 2.29
325 326 1.295792 CGTGCCCGTGCTATTACATT 58.704 50.000 0.00 0.00 38.71 2.71
326 327 1.003972 CGTGCCCGTGCTATTACATTG 60.004 52.381 0.00 0.00 38.71 2.82
327 328 1.333619 GTGCCCGTGCTATTACATTGG 59.666 52.381 0.00 0.00 38.71 3.16
328 329 0.310854 GCCCGTGCTATTACATTGGC 59.689 55.000 0.00 0.00 33.66 4.52
329 330 1.674359 CCCGTGCTATTACATTGGCA 58.326 50.000 0.00 0.00 0.00 4.92
330 331 2.229792 CCCGTGCTATTACATTGGCAT 58.770 47.619 0.00 0.00 37.05 4.40
331 332 3.407698 CCCGTGCTATTACATTGGCATA 58.592 45.455 0.00 0.00 37.05 3.14
332 333 3.436704 CCCGTGCTATTACATTGGCATAG 59.563 47.826 0.00 0.00 37.05 2.23
333 334 4.065088 CCGTGCTATTACATTGGCATAGT 58.935 43.478 0.00 0.00 37.05 2.12
334 335 4.515191 CCGTGCTATTACATTGGCATAGTT 59.485 41.667 0.00 0.00 37.05 2.24
335 336 5.699001 CCGTGCTATTACATTGGCATAGTTA 59.301 40.000 0.00 0.00 37.05 2.24
336 337 6.347402 CCGTGCTATTACATTGGCATAGTTAC 60.347 42.308 0.00 5.66 37.05 2.50
337 338 6.201997 CGTGCTATTACATTGGCATAGTTACA 59.798 38.462 0.00 0.00 37.05 2.41
338 339 7.095229 CGTGCTATTACATTGGCATAGTTACAT 60.095 37.037 0.00 0.00 37.05 2.29
339 340 8.230486 GTGCTATTACATTGGCATAGTTACATC 58.770 37.037 0.00 0.00 37.05 3.06
340 341 7.936301 TGCTATTACATTGGCATAGTTACATCA 59.064 33.333 0.00 0.00 0.00 3.07
341 342 8.950210 GCTATTACATTGGCATAGTTACATCAT 58.050 33.333 0.00 0.00 0.00 2.45
343 344 8.696043 ATTACATTGGCATAGTTACATCATGT 57.304 30.769 0.00 0.00 0.00 3.21
344 345 6.381481 ACATTGGCATAGTTACATCATGTG 57.619 37.500 0.00 0.00 0.00 3.21
345 346 5.887598 ACATTGGCATAGTTACATCATGTGT 59.112 36.000 0.00 6.26 44.95 3.72
346 347 6.038603 ACATTGGCATAGTTACATCATGTGTC 59.961 38.462 0.00 0.00 42.29 3.67
347 348 5.357742 TGGCATAGTTACATCATGTGTCT 57.642 39.130 0.00 1.26 42.29 3.41
348 349 6.478512 TGGCATAGTTACATCATGTGTCTA 57.521 37.500 0.00 3.56 42.29 2.59
349 350 6.515832 TGGCATAGTTACATCATGTGTCTAG 58.484 40.000 0.00 0.06 42.29 2.43
350 351 5.406780 GGCATAGTTACATCATGTGTCTAGC 59.593 44.000 0.00 8.19 42.29 3.42
351 352 5.406780 GCATAGTTACATCATGTGTCTAGCC 59.593 44.000 0.00 0.00 42.29 3.93
352 353 4.408182 AGTTACATCATGTGTCTAGCCC 57.592 45.455 0.00 0.00 42.29 5.19
353 354 3.134804 AGTTACATCATGTGTCTAGCCCC 59.865 47.826 0.00 0.00 42.29 5.80
354 355 1.583556 ACATCATGTGTCTAGCCCCA 58.416 50.000 0.00 0.00 35.77 4.96
355 356 1.210478 ACATCATGTGTCTAGCCCCAC 59.790 52.381 0.00 0.00 35.77 4.61
356 357 1.487976 CATCATGTGTCTAGCCCCACT 59.512 52.381 0.00 0.00 32.76 4.00
357 358 2.543037 TCATGTGTCTAGCCCCACTA 57.457 50.000 0.00 0.00 32.76 2.74
358 359 3.046283 TCATGTGTCTAGCCCCACTAT 57.954 47.619 0.00 0.37 32.76 2.12
359 360 4.193240 TCATGTGTCTAGCCCCACTATA 57.807 45.455 0.00 0.00 32.76 1.31
360 361 4.752063 TCATGTGTCTAGCCCCACTATAT 58.248 43.478 0.00 0.00 32.76 0.86
361 362 5.899278 TCATGTGTCTAGCCCCACTATATA 58.101 41.667 0.00 0.00 32.76 0.86
362 363 6.503041 TCATGTGTCTAGCCCCACTATATAT 58.497 40.000 0.00 0.00 32.76 0.86
363 364 7.648770 TCATGTGTCTAGCCCCACTATATATA 58.351 38.462 0.00 0.00 32.76 0.86
364 365 8.119891 TCATGTGTCTAGCCCCACTATATATAA 58.880 37.037 0.00 0.00 32.76 0.98
365 366 7.956328 TGTGTCTAGCCCCACTATATATAAG 57.044 40.000 8.02 0.00 32.76 1.73
366 367 7.705700 TGTGTCTAGCCCCACTATATATAAGA 58.294 38.462 8.02 0.00 32.76 2.10
367 368 7.834681 TGTGTCTAGCCCCACTATATATAAGAG 59.165 40.741 8.02 0.00 32.76 2.85
368 369 7.285858 GTGTCTAGCCCCACTATATATAAGAGG 59.714 44.444 0.00 0.00 0.00 3.69
369 370 7.036059 TGTCTAGCCCCACTATATATAAGAGGT 60.036 40.741 0.00 0.00 0.00 3.85
370 371 7.503230 GTCTAGCCCCACTATATATAAGAGGTC 59.497 44.444 0.00 0.00 0.00 3.85
371 372 6.424826 AGCCCCACTATATATAAGAGGTCT 57.575 41.667 0.00 0.00 0.00 3.85
372 373 7.541271 AGCCCCACTATATATAAGAGGTCTA 57.459 40.000 0.00 0.00 0.00 2.59
373 374 7.355890 AGCCCCACTATATATAAGAGGTCTAC 58.644 42.308 0.00 0.00 0.00 2.59
374 375 6.262720 GCCCCACTATATATAAGAGGTCTACG 59.737 46.154 0.00 0.00 0.00 3.51
375 376 7.571919 CCCCACTATATATAAGAGGTCTACGA 58.428 42.308 0.00 0.00 0.00 3.43
376 377 8.219178 CCCCACTATATATAAGAGGTCTACGAT 58.781 40.741 0.00 0.00 0.00 3.73
384 385 4.373348 AAGAGGTCTACGATACAAGTGC 57.627 45.455 0.00 0.00 0.00 4.40
385 386 2.688958 AGAGGTCTACGATACAAGTGCC 59.311 50.000 0.00 0.00 0.00 5.01
386 387 1.755380 AGGTCTACGATACAAGTGCCC 59.245 52.381 0.00 0.00 0.00 5.36
387 388 1.755380 GGTCTACGATACAAGTGCCCT 59.245 52.381 0.00 0.00 0.00 5.19
388 389 2.954318 GGTCTACGATACAAGTGCCCTA 59.046 50.000 0.00 0.00 0.00 3.53
389 390 3.243334 GGTCTACGATACAAGTGCCCTAC 60.243 52.174 0.00 0.00 0.00 3.18
390 391 3.631227 GTCTACGATACAAGTGCCCTACT 59.369 47.826 0.00 0.00 42.89 2.57
399 400 1.656587 AGTGCCCTACTTGGACATGA 58.343 50.000 0.00 0.00 35.67 3.07
400 401 1.279271 AGTGCCCTACTTGGACATGAC 59.721 52.381 0.00 0.00 35.67 3.06
401 402 1.279271 GTGCCCTACTTGGACATGACT 59.721 52.381 0.00 0.00 38.35 3.41
402 403 1.985159 TGCCCTACTTGGACATGACTT 59.015 47.619 0.00 0.00 38.35 3.01
403 404 2.375174 TGCCCTACTTGGACATGACTTT 59.625 45.455 0.00 0.00 38.35 2.66
404 405 3.585289 TGCCCTACTTGGACATGACTTTA 59.415 43.478 0.00 0.00 38.35 1.85
405 406 4.227300 TGCCCTACTTGGACATGACTTTAT 59.773 41.667 0.00 0.00 38.35 1.40
406 407 5.427157 TGCCCTACTTGGACATGACTTTATA 59.573 40.000 0.00 0.00 38.35 0.98
407 408 6.101150 TGCCCTACTTGGACATGACTTTATAT 59.899 38.462 0.00 0.00 38.35 0.86
408 409 6.998673 GCCCTACTTGGACATGACTTTATATT 59.001 38.462 0.00 0.00 38.35 1.28
409 410 7.173390 GCCCTACTTGGACATGACTTTATATTC 59.827 40.741 0.00 0.00 38.35 1.75
410 411 8.432805 CCCTACTTGGACATGACTTTATATTCT 58.567 37.037 0.00 0.00 38.35 2.40
411 412 9.265901 CCTACTTGGACATGACTTTATATTCTG 57.734 37.037 0.00 0.00 38.35 3.02
412 413 9.823647 CTACTTGGACATGACTTTATATTCTGT 57.176 33.333 0.00 0.00 0.00 3.41
413 414 8.723942 ACTTGGACATGACTTTATATTCTGTC 57.276 34.615 0.00 0.00 0.00 3.51
414 415 8.321353 ACTTGGACATGACTTTATATTCTGTCA 58.679 33.333 0.00 0.00 42.50 3.58
415 416 8.492673 TTGGACATGACTTTATATTCTGTCAC 57.507 34.615 0.00 0.00 41.37 3.67
416 417 7.619965 TGGACATGACTTTATATTCTGTCACA 58.380 34.615 0.00 0.00 41.37 3.58
417 418 7.549134 TGGACATGACTTTATATTCTGTCACAC 59.451 37.037 0.00 0.00 41.37 3.82
418 419 7.549134 GGACATGACTTTATATTCTGTCACACA 59.451 37.037 0.00 0.00 41.37 3.72
419 420 8.256611 ACATGACTTTATATTCTGTCACACAC 57.743 34.615 0.00 0.00 41.37 3.82
420 421 7.334421 ACATGACTTTATATTCTGTCACACACC 59.666 37.037 0.00 0.00 41.37 4.16
421 422 5.867174 TGACTTTATATTCTGTCACACACCG 59.133 40.000 0.00 0.00 34.94 4.94
422 423 5.790593 ACTTTATATTCTGTCACACACCGT 58.209 37.500 0.00 0.00 0.00 4.83
423 424 6.927416 ACTTTATATTCTGTCACACACCGTA 58.073 36.000 0.00 0.00 0.00 4.02
424 425 6.810182 ACTTTATATTCTGTCACACACCGTAC 59.190 38.462 0.00 0.00 0.00 3.67
425 426 2.060326 ATTCTGTCACACACCGTACG 57.940 50.000 8.69 8.69 0.00 3.67
426 427 1.023502 TTCTGTCACACACCGTACGA 58.976 50.000 18.76 0.00 0.00 3.43
427 428 1.241165 TCTGTCACACACCGTACGAT 58.759 50.000 18.76 0.00 0.00 3.73
428 429 1.610038 TCTGTCACACACCGTACGATT 59.390 47.619 18.76 0.00 0.00 3.34
429 430 1.983605 CTGTCACACACCGTACGATTC 59.016 52.381 18.76 0.00 0.00 2.52
430 431 1.610038 TGTCACACACCGTACGATTCT 59.390 47.619 18.76 0.00 0.00 2.40
431 432 2.813172 TGTCACACACCGTACGATTCTA 59.187 45.455 18.76 0.00 0.00 2.10
432 433 3.252944 TGTCACACACCGTACGATTCTAA 59.747 43.478 18.76 0.00 0.00 2.10
433 434 3.850273 GTCACACACCGTACGATTCTAAG 59.150 47.826 18.76 0.00 0.00 2.18
434 435 3.503363 TCACACACCGTACGATTCTAAGT 59.497 43.478 18.76 0.39 0.00 2.24
435 436 3.850273 CACACACCGTACGATTCTAAGTC 59.150 47.826 18.76 0.00 0.00 3.01
436 437 3.119708 ACACACCGTACGATTCTAAGTCC 60.120 47.826 18.76 0.00 0.00 3.85
437 438 3.084039 ACACCGTACGATTCTAAGTCCA 58.916 45.455 18.76 0.00 0.00 4.02
438 439 3.507233 ACACCGTACGATTCTAAGTCCAA 59.493 43.478 18.76 0.00 0.00 3.53
439 440 3.855950 CACCGTACGATTCTAAGTCCAAC 59.144 47.826 18.76 0.00 0.00 3.77
440 441 3.119352 ACCGTACGATTCTAAGTCCAACC 60.119 47.826 18.76 0.00 0.00 3.77
441 442 3.103738 CGTACGATTCTAAGTCCAACCG 58.896 50.000 10.44 0.00 0.00 4.44
442 443 3.426695 CGTACGATTCTAAGTCCAACCGT 60.427 47.826 10.44 0.00 0.00 4.83
443 444 4.201812 CGTACGATTCTAAGTCCAACCGTA 60.202 45.833 10.44 0.00 0.00 4.02
444 445 4.789012 ACGATTCTAAGTCCAACCGTAA 57.211 40.909 0.00 0.00 0.00 3.18
445 446 4.488879 ACGATTCTAAGTCCAACCGTAAC 58.511 43.478 0.00 0.00 0.00 2.50
446 447 3.861689 CGATTCTAAGTCCAACCGTAACC 59.138 47.826 0.00 0.00 0.00 2.85
447 448 4.381292 CGATTCTAAGTCCAACCGTAACCT 60.381 45.833 0.00 0.00 0.00 3.50
448 449 5.163622 CGATTCTAAGTCCAACCGTAACCTA 60.164 44.000 0.00 0.00 0.00 3.08
449 450 6.460676 CGATTCTAAGTCCAACCGTAACCTAT 60.461 42.308 0.00 0.00 0.00 2.57
450 451 5.841957 TCTAAGTCCAACCGTAACCTATC 57.158 43.478 0.00 0.00 0.00 2.08
451 452 5.513233 TCTAAGTCCAACCGTAACCTATCT 58.487 41.667 0.00 0.00 0.00 1.98
452 453 5.954150 TCTAAGTCCAACCGTAACCTATCTT 59.046 40.000 0.00 0.00 0.00 2.40
453 454 4.467198 AGTCCAACCGTAACCTATCTTG 57.533 45.455 0.00 0.00 0.00 3.02
454 455 3.836562 AGTCCAACCGTAACCTATCTTGT 59.163 43.478 0.00 0.00 0.00 3.16
455 456 5.018809 AGTCCAACCGTAACCTATCTTGTA 58.981 41.667 0.00 0.00 0.00 2.41
456 457 5.659971 AGTCCAACCGTAACCTATCTTGTAT 59.340 40.000 0.00 0.00 0.00 2.29
457 458 6.835488 AGTCCAACCGTAACCTATCTTGTATA 59.165 38.462 0.00 0.00 0.00 1.47
458 459 7.342799 AGTCCAACCGTAACCTATCTTGTATAA 59.657 37.037 0.00 0.00 0.00 0.98
459 460 8.146412 GTCCAACCGTAACCTATCTTGTATAAT 58.854 37.037 0.00 0.00 0.00 1.28
460 461 9.365906 TCCAACCGTAACCTATCTTGTATAATA 57.634 33.333 0.00 0.00 0.00 0.98
461 462 9.985730 CCAACCGTAACCTATCTTGTATAATAA 57.014 33.333 0.00 0.00 0.00 1.40
486 487 6.671614 ATTTGACACAACTCTAACAAACGA 57.328 33.333 0.00 0.00 31.77 3.85
487 488 6.483385 TTTGACACAACTCTAACAAACGAA 57.517 33.333 0.00 0.00 0.00 3.85
488 489 6.483385 TTGACACAACTCTAACAAACGAAA 57.517 33.333 0.00 0.00 0.00 3.46
489 490 5.860641 TGACACAACTCTAACAAACGAAAC 58.139 37.500 0.00 0.00 0.00 2.78
490 491 5.408909 TGACACAACTCTAACAAACGAAACA 59.591 36.000 0.00 0.00 0.00 2.83
491 492 6.073167 TGACACAACTCTAACAAACGAAACAA 60.073 34.615 0.00 0.00 0.00 2.83
492 493 6.848451 ACACAACTCTAACAAACGAAACAAT 58.152 32.000 0.00 0.00 0.00 2.71
493 494 7.976826 ACACAACTCTAACAAACGAAACAATA 58.023 30.769 0.00 0.00 0.00 1.90
494 495 8.120465 ACACAACTCTAACAAACGAAACAATAG 58.880 33.333 0.00 0.00 0.00 1.73
495 496 7.586300 CACAACTCTAACAAACGAAACAATAGG 59.414 37.037 0.00 0.00 0.00 2.57
496 497 7.496591 ACAACTCTAACAAACGAAACAATAGGA 59.503 33.333 0.00 0.00 0.00 2.94
497 498 8.504005 CAACTCTAACAAACGAAACAATAGGAT 58.496 33.333 0.00 0.00 0.00 3.24
498 499 8.617290 ACTCTAACAAACGAAACAATAGGATT 57.383 30.769 0.00 0.00 0.00 3.01
499 500 9.063615 ACTCTAACAAACGAAACAATAGGATTT 57.936 29.630 0.00 0.00 0.00 2.17
500 501 9.893305 CTCTAACAAACGAAACAATAGGATTTT 57.107 29.630 0.00 0.00 0.00 1.82
501 502 9.672086 TCTAACAAACGAAACAATAGGATTTTG 57.328 29.630 0.00 0.00 0.00 2.44
502 503 9.458374 CTAACAAACGAAACAATAGGATTTTGT 57.542 29.630 0.00 0.00 38.91 2.83
503 504 8.710835 AACAAACGAAACAATAGGATTTTGTT 57.289 26.923 0.00 0.00 46.38 2.83
513 514 8.635765 ACAATAGGATTTTGTTTCTAGCTTCA 57.364 30.769 0.00 0.00 33.64 3.02
514 515 8.734386 ACAATAGGATTTTGTTTCTAGCTTCAG 58.266 33.333 0.00 0.00 33.64 3.02
515 516 5.635417 AGGATTTTGTTTCTAGCTTCAGC 57.365 39.130 0.00 0.00 42.49 4.26
516 517 5.072741 AGGATTTTGTTTCTAGCTTCAGCA 58.927 37.500 0.75 0.00 45.16 4.41
517 518 5.182760 AGGATTTTGTTTCTAGCTTCAGCAG 59.817 40.000 0.75 0.00 45.16 4.24
518 519 5.182001 GGATTTTGTTTCTAGCTTCAGCAGA 59.818 40.000 0.75 0.00 45.16 4.26
519 520 5.679734 TTTTGTTTCTAGCTTCAGCAGAG 57.320 39.130 0.75 0.00 45.16 3.35
520 521 2.693069 TGTTTCTAGCTTCAGCAGAGC 58.307 47.619 0.75 0.00 45.16 4.09
521 522 1.658095 GTTTCTAGCTTCAGCAGAGCG 59.342 52.381 0.75 0.00 45.16 5.03
522 523 0.891373 TTCTAGCTTCAGCAGAGCGT 59.109 50.000 0.75 0.00 45.16 5.07
523 524 0.172127 TCTAGCTTCAGCAGAGCGTG 59.828 55.000 0.75 0.00 45.16 5.34
524 525 0.805322 CTAGCTTCAGCAGAGCGTGG 60.805 60.000 0.75 0.00 45.16 4.94
525 526 1.536073 TAGCTTCAGCAGAGCGTGGT 61.536 55.000 0.75 0.00 45.16 4.16
526 527 1.963338 GCTTCAGCAGAGCGTGGTT 60.963 57.895 0.00 0.00 41.59 3.67
527 528 1.864862 CTTCAGCAGAGCGTGGTTG 59.135 57.895 0.00 0.00 33.38 3.77
528 529 0.882042 CTTCAGCAGAGCGTGGTTGT 60.882 55.000 0.00 0.00 33.38 3.32
529 530 1.159713 TTCAGCAGAGCGTGGTTGTG 61.160 55.000 0.00 0.00 33.38 3.33
530 531 1.889105 CAGCAGAGCGTGGTTGTGT 60.889 57.895 0.00 0.00 33.38 3.72
531 532 1.153168 AGCAGAGCGTGGTTGTGTT 60.153 52.632 0.00 0.00 30.62 3.32
532 533 0.105964 AGCAGAGCGTGGTTGTGTTA 59.894 50.000 0.00 0.00 30.62 2.41
533 534 0.941542 GCAGAGCGTGGTTGTGTTAA 59.058 50.000 0.00 0.00 0.00 2.01
534 535 1.069906 GCAGAGCGTGGTTGTGTTAAG 60.070 52.381 0.00 0.00 0.00 1.85
535 536 2.479837 CAGAGCGTGGTTGTGTTAAGA 58.520 47.619 0.00 0.00 0.00 2.10
536 537 2.869801 CAGAGCGTGGTTGTGTTAAGAA 59.130 45.455 0.00 0.00 0.00 2.52
537 538 3.059597 CAGAGCGTGGTTGTGTTAAGAAG 60.060 47.826 0.00 0.00 0.00 2.85
538 539 3.128349 GAGCGTGGTTGTGTTAAGAAGA 58.872 45.455 0.00 0.00 0.00 2.87
539 540 3.537580 AGCGTGGTTGTGTTAAGAAGAA 58.462 40.909 0.00 0.00 0.00 2.52
540 541 3.942748 AGCGTGGTTGTGTTAAGAAGAAA 59.057 39.130 0.00 0.00 0.00 2.52
541 542 4.035208 AGCGTGGTTGTGTTAAGAAGAAAG 59.965 41.667 0.00 0.00 0.00 2.62
542 543 4.788521 GCGTGGTTGTGTTAAGAAGAAAGG 60.789 45.833 0.00 0.00 0.00 3.11
543 544 4.261031 CGTGGTTGTGTTAAGAAGAAAGGG 60.261 45.833 0.00 0.00 0.00 3.95
544 545 4.643334 GTGGTTGTGTTAAGAAGAAAGGGT 59.357 41.667 0.00 0.00 0.00 4.34
545 546 5.824097 GTGGTTGTGTTAAGAAGAAAGGGTA 59.176 40.000 0.00 0.00 0.00 3.69
546 547 6.489022 GTGGTTGTGTTAAGAAGAAAGGGTAT 59.511 38.462 0.00 0.00 0.00 2.73
547 548 7.662669 GTGGTTGTGTTAAGAAGAAAGGGTATA 59.337 37.037 0.00 0.00 0.00 1.47
548 549 8.387813 TGGTTGTGTTAAGAAGAAAGGGTATAT 58.612 33.333 0.00 0.00 0.00 0.86
549 550 9.895138 GGTTGTGTTAAGAAGAAAGGGTATATA 57.105 33.333 0.00 0.00 0.00 0.86
551 552 9.590451 TTGTGTTAAGAAGAAAGGGTATATACG 57.410 33.333 6.79 0.00 0.00 3.06
552 553 8.752187 TGTGTTAAGAAGAAAGGGTATATACGT 58.248 33.333 6.79 0.00 0.00 3.57
553 554 9.591792 GTGTTAAGAAGAAAGGGTATATACGTT 57.408 33.333 6.79 0.57 0.00 3.99
554 555 9.807649 TGTTAAGAAGAAAGGGTATATACGTTC 57.192 33.333 6.79 9.76 0.00 3.95
555 556 9.807649 GTTAAGAAGAAAGGGTATATACGTTCA 57.192 33.333 17.76 0.00 0.00 3.18
558 559 7.668492 AGAAGAAAGGGTATATACGTTCATCC 58.332 38.462 17.76 9.26 0.00 3.51
559 560 7.509659 AGAAGAAAGGGTATATACGTTCATCCT 59.490 37.037 17.76 10.88 0.00 3.24
560 561 6.994221 AGAAAGGGTATATACGTTCATCCTG 58.006 40.000 17.76 0.00 0.00 3.86
561 562 5.740290 AAGGGTATATACGTTCATCCTGG 57.260 43.478 6.79 0.00 0.00 4.45
562 563 3.514309 AGGGTATATACGTTCATCCTGGC 59.486 47.826 6.79 0.00 0.00 4.85
563 564 3.259876 GGGTATATACGTTCATCCTGGCA 59.740 47.826 6.79 0.00 0.00 4.92
564 565 4.495422 GGTATATACGTTCATCCTGGCAG 58.505 47.826 7.75 7.75 0.00 4.85
565 566 4.021368 GGTATATACGTTCATCCTGGCAGT 60.021 45.833 14.43 0.00 0.00 4.40
600 601 1.064458 GAGGCCTCGAGCGTTCTAC 59.936 63.158 19.06 0.00 45.17 2.59
601 602 1.378124 GAGGCCTCGAGCGTTCTACT 61.378 60.000 19.06 0.00 45.17 2.57
602 603 1.064458 GGCCTCGAGCGTTCTACTC 59.936 63.158 6.99 0.00 45.17 2.59
603 604 1.064458 GCCTCGAGCGTTCTACTCC 59.936 63.158 6.99 0.00 0.00 3.85
604 605 1.728672 CCTCGAGCGTTCTACTCCC 59.271 63.158 6.99 0.00 0.00 4.30
605 606 0.748729 CCTCGAGCGTTCTACTCCCT 60.749 60.000 6.99 0.00 0.00 4.20
606 607 0.658897 CTCGAGCGTTCTACTCCCTC 59.341 60.000 0.00 0.00 0.00 4.30
607 608 0.747283 TCGAGCGTTCTACTCCCTCC 60.747 60.000 0.00 0.00 0.00 4.30
608 609 1.030488 CGAGCGTTCTACTCCCTCCA 61.030 60.000 0.00 0.00 0.00 3.86
609 610 1.404843 GAGCGTTCTACTCCCTCCAT 58.595 55.000 0.00 0.00 0.00 3.41
610 611 1.338655 GAGCGTTCTACTCCCTCCATC 59.661 57.143 0.00 0.00 0.00 3.51
611 612 0.389757 GCGTTCTACTCCCTCCATCC 59.610 60.000 0.00 0.00 0.00 3.51
612 613 1.041437 CGTTCTACTCCCTCCATCCC 58.959 60.000 0.00 0.00 0.00 3.85
613 614 1.688311 CGTTCTACTCCCTCCATCCCA 60.688 57.143 0.00 0.00 0.00 4.37
614 615 2.695585 GTTCTACTCCCTCCATCCCAT 58.304 52.381 0.00 0.00 0.00 4.00
615 616 3.754172 CGTTCTACTCCCTCCATCCCATA 60.754 52.174 0.00 0.00 0.00 2.74
616 617 4.232091 GTTCTACTCCCTCCATCCCATAA 58.768 47.826 0.00 0.00 0.00 1.90
617 618 4.785173 TCTACTCCCTCCATCCCATAAT 57.215 45.455 0.00 0.00 0.00 1.28
618 619 5.896530 TCTACTCCCTCCATCCCATAATA 57.103 43.478 0.00 0.00 0.00 0.98
619 620 6.438111 TCTACTCCCTCCATCCCATAATAT 57.562 41.667 0.00 0.00 0.00 1.28
620 621 7.554597 TCTACTCCCTCCATCCCATAATATA 57.445 40.000 0.00 0.00 0.00 0.86
621 622 7.961940 TCTACTCCCTCCATCCCATAATATAA 58.038 38.462 0.00 0.00 0.00 0.98
622 623 8.414623 TCTACTCCCTCCATCCCATAATATAAA 58.585 37.037 0.00 0.00 0.00 1.40
623 624 7.905144 ACTCCCTCCATCCCATAATATAAAA 57.095 36.000 0.00 0.00 0.00 1.52
624 625 8.300752 ACTCCCTCCATCCCATAATATAAAAA 57.699 34.615 0.00 0.00 0.00 1.94
625 626 8.170730 ACTCCCTCCATCCCATAATATAAAAAC 58.829 37.037 0.00 0.00 0.00 2.43
626 627 7.172342 TCCCTCCATCCCATAATATAAAAACG 58.828 38.462 0.00 0.00 0.00 3.60
627 628 6.377146 CCCTCCATCCCATAATATAAAAACGG 59.623 42.308 0.00 0.00 0.00 4.44
628 629 6.946009 CCTCCATCCCATAATATAAAAACGGT 59.054 38.462 0.00 0.00 0.00 4.83
629 630 7.450323 CCTCCATCCCATAATATAAAAACGGTT 59.550 37.037 0.00 0.00 0.00 4.44
630 631 8.770010 TCCATCCCATAATATAAAAACGGTTT 57.230 30.769 0.00 0.00 0.00 3.27
631 632 9.203163 TCCATCCCATAATATAAAAACGGTTTT 57.797 29.630 16.55 16.55 40.15 2.43
632 633 9.825109 CCATCCCATAATATAAAAACGGTTTTT 57.175 29.630 28.33 28.33 44.43 1.94
678 679 9.877178 AAAATGCTCTTATATTATAGGACGGAG 57.123 33.333 0.00 0.00 0.00 4.63
679 680 7.589958 ATGCTCTTATATTATAGGACGGAGG 57.410 40.000 0.00 0.00 0.00 4.30
680 681 5.892119 TGCTCTTATATTATAGGACGGAGGG 59.108 44.000 0.00 0.00 0.00 4.30
681 682 6.127793 GCTCTTATATTATAGGACGGAGGGA 58.872 44.000 0.00 0.00 0.00 4.20
682 683 6.263617 GCTCTTATATTATAGGACGGAGGGAG 59.736 46.154 0.00 0.00 0.00 4.30
683 684 7.281366 TCTTATATTATAGGACGGAGGGAGT 57.719 40.000 0.00 0.00 0.00 3.85
684 685 8.397951 TCTTATATTATAGGACGGAGGGAGTA 57.602 38.462 0.00 0.00 0.00 2.59
933 942 1.185315 CCACCACCACCAATCAATCC 58.815 55.000 0.00 0.00 0.00 3.01
992 1005 3.706373 CCACTCCACTCCCCACCG 61.706 72.222 0.00 0.00 0.00 4.94
1267 1303 1.020861 TCGCCATTGCAGCAGTAGTG 61.021 55.000 0.00 0.00 37.32 2.74
1328 1369 2.034124 CAAATGGGCCTGGGATAACAG 58.966 52.381 4.53 0.00 38.21 3.16
1349 1390 2.429069 CGGGCTTCGCTTGTTTGC 60.429 61.111 0.00 0.00 0.00 3.68
1746 1787 2.435059 GAGTTCAGCGGCAGGGTC 60.435 66.667 1.45 0.00 0.00 4.46
1755 1796 1.519455 CGGCAGGGTCAACGAGATC 60.519 63.158 0.00 0.00 0.00 2.75
1805 1865 5.285651 GTCTGACATGTAACTGGCTAGATC 58.714 45.833 3.17 0.00 0.00 2.75
1851 1916 9.640963 GAGTGTCTTGTCTTTTAAGCTTCTATA 57.359 33.333 0.00 0.00 0.00 1.31
1871 1936 7.541162 TCTATATAACCGGACGAATAATGGTG 58.459 38.462 9.46 0.00 32.14 4.17
1873 1938 0.906775 ACCGGACGAATAATGGTGGT 59.093 50.000 9.46 0.00 0.00 4.16
1875 1940 0.655733 CGGACGAATAATGGTGGTGC 59.344 55.000 0.00 0.00 0.00 5.01
1876 1941 1.021968 GGACGAATAATGGTGGTGCC 58.978 55.000 0.00 0.00 37.90 5.01
1877 1942 1.408266 GGACGAATAATGGTGGTGCCT 60.408 52.381 0.00 0.00 38.35 4.75
1889 1954 3.089284 GGTGGTGCCTTATAAACTGCTT 58.911 45.455 3.77 0.00 0.00 3.91
1894 1959 4.495844 GGTGCCTTATAAACTGCTTAAGCG 60.496 45.833 21.97 18.00 45.83 4.68
1897 1962 5.413213 TGCCTTATAAACTGCTTAAGCGAAA 59.587 36.000 21.97 4.40 45.83 3.46
1900 1965 7.798982 GCCTTATAAACTGCTTAAGCGAAATAG 59.201 37.037 21.97 15.32 45.83 1.73
1902 1967 9.638300 CTTATAAACTGCTTAAGCGAAATAGTG 57.362 33.333 21.97 5.14 45.83 2.74
1903 1968 7.843490 ATAAACTGCTTAAGCGAAATAGTGA 57.157 32.000 21.97 11.32 45.83 3.41
1925 1996 1.806542 CTGTTTTGCGCTGTATGGACT 59.193 47.619 9.73 0.00 0.00 3.85
1970 2042 0.644843 GTGCAACAAACTGTTTGCCG 59.355 50.000 28.02 20.89 44.39 5.69
2064 2189 3.597675 TATCACACCGGCGCTGCAA 62.598 57.895 11.81 0.00 0.00 4.08
2079 2204 3.548616 CGCTGCAACTGAAGAATCAAACA 60.549 43.478 0.00 0.00 34.49 2.83
2084 2209 4.516698 GCAACTGAAGAATCAAACAGAGGA 59.483 41.667 0.00 0.00 34.49 3.71
2088 2213 4.560128 TGAAGAATCAAACAGAGGAGTCG 58.440 43.478 0.00 0.00 33.66 4.18
2089 2214 4.280929 TGAAGAATCAAACAGAGGAGTCGA 59.719 41.667 0.00 0.00 33.66 4.20
2090 2215 4.448537 AGAATCAAACAGAGGAGTCGAG 57.551 45.455 0.00 0.00 33.66 4.04
2091 2216 3.829601 AGAATCAAACAGAGGAGTCGAGT 59.170 43.478 0.00 0.00 33.66 4.18
2092 2217 3.859411 ATCAAACAGAGGAGTCGAGTC 57.141 47.619 12.02 12.02 0.00 3.36
2094 2219 1.613925 CAAACAGAGGAGTCGAGTCCA 59.386 52.381 35.01 0.00 39.34 4.02
2095 2220 1.540267 AACAGAGGAGTCGAGTCCAG 58.460 55.000 35.01 26.36 39.34 3.86
2109 2235 1.070289 AGTCCAGGTTTCTTCCGTCAC 59.930 52.381 0.00 0.00 0.00 3.67
2115 2241 2.171870 AGGTTTCTTCCGTCACCTCAAA 59.828 45.455 0.00 0.00 34.27 2.69
2121 2247 2.992124 TCCGTCACCTCAAACAGAAA 57.008 45.000 0.00 0.00 0.00 2.52
2139 2265 4.386049 CAGAAACGGTGATTCTCACTACAC 59.614 45.833 7.17 0.00 46.19 2.90
2150 2281 0.596577 TCACTACACCGACTGCACTC 59.403 55.000 0.00 0.00 0.00 3.51
2165 2296 1.802136 GCACTCTCTCTTGGAGCATCG 60.802 57.143 0.00 0.00 41.60 3.84
2168 2299 1.952990 CTCTCTCTTGGAGCATCGCTA 59.047 52.381 0.00 0.00 39.88 4.26
2169 2300 1.678627 TCTCTCTTGGAGCATCGCTAC 59.321 52.381 0.00 0.00 39.88 3.58
2183 2317 1.000506 TCGCTACAAACAGGGAGTGTC 59.999 52.381 0.00 0.00 39.03 3.67
2196 2334 1.749634 GGAGTGTCTACGTGCTACCAT 59.250 52.381 0.00 0.00 0.00 3.55
2203 2341 1.594397 CTACGTGCTACCATCGACGTA 59.406 52.381 0.00 0.00 42.91 3.57
2204 2342 0.097674 ACGTGCTACCATCGACGTAC 59.902 55.000 0.00 0.00 42.91 3.67
2205 2343 0.097499 CGTGCTACCATCGACGTACA 59.903 55.000 0.00 0.00 0.00 2.90
2207 2345 1.131883 GTGCTACCATCGACGTACAGT 59.868 52.381 0.00 0.00 0.00 3.55
2208 2346 2.352651 GTGCTACCATCGACGTACAGTA 59.647 50.000 0.00 0.00 0.00 2.74
2209 2347 2.352651 TGCTACCATCGACGTACAGTAC 59.647 50.000 0.00 0.00 0.00 2.73
2212 2350 4.271049 GCTACCATCGACGTACAGTACTAA 59.729 45.833 9.10 0.00 0.00 2.24
2214 2352 4.974591 ACCATCGACGTACAGTACTAAAC 58.025 43.478 9.10 0.00 0.00 2.01
2215 2353 4.455533 ACCATCGACGTACAGTACTAAACA 59.544 41.667 9.10 0.00 0.00 2.83
2216 2354 5.124457 ACCATCGACGTACAGTACTAAACAT 59.876 40.000 9.10 0.00 0.00 2.71
2217 2355 6.032094 CCATCGACGTACAGTACTAAACATT 58.968 40.000 9.10 0.00 0.00 2.71
2218 2356 6.529125 CCATCGACGTACAGTACTAAACATTT 59.471 38.462 9.10 0.00 0.00 2.32
2220 2358 7.324322 TCGACGTACAGTACTAAACATTTTG 57.676 36.000 9.10 0.00 0.00 2.44
2221 2359 6.917477 TCGACGTACAGTACTAAACATTTTGT 59.083 34.615 9.10 0.00 0.00 2.83
2222 2360 6.999627 CGACGTACAGTACTAAACATTTTGTG 59.000 38.462 9.10 0.00 0.00 3.33
2223 2361 7.181143 ACGTACAGTACTAAACATTTTGTGG 57.819 36.000 9.10 0.00 0.00 4.17
2224 2362 6.075280 CGTACAGTACTAAACATTTTGTGGC 58.925 40.000 9.10 0.00 0.00 5.01
2225 2363 5.103290 ACAGTACTAAACATTTTGTGGCG 57.897 39.130 0.00 0.00 0.00 5.69
2229 2367 3.316283 ACTAAACATTTTGTGGCGCATG 58.684 40.909 10.83 5.57 0.00 4.06
2230 2368 2.522836 AAACATTTTGTGGCGCATGA 57.477 40.000 10.83 0.00 0.00 3.07
2231 2369 2.068837 AACATTTTGTGGCGCATGAG 57.931 45.000 10.83 0.00 0.00 2.90
2233 2371 1.612950 ACATTTTGTGGCGCATGAGAA 59.387 42.857 10.83 0.00 0.00 2.87
2234 2372 2.035704 ACATTTTGTGGCGCATGAGAAA 59.964 40.909 10.83 0.00 0.00 2.52
2236 2374 0.040514 TTTGTGGCGCATGAGAAACG 60.041 50.000 10.83 0.00 0.00 3.60
2237 2375 0.882484 TTGTGGCGCATGAGAAACGA 60.882 50.000 10.83 0.00 0.00 3.85
2238 2376 0.673333 TGTGGCGCATGAGAAACGAT 60.673 50.000 10.83 0.00 0.00 3.73
2239 2377 1.286501 GTGGCGCATGAGAAACGATA 58.713 50.000 10.83 0.00 0.00 2.92
2240 2378 1.663643 GTGGCGCATGAGAAACGATAA 59.336 47.619 10.83 0.00 0.00 1.75
2241 2379 2.095213 GTGGCGCATGAGAAACGATAAA 59.905 45.455 10.83 0.00 0.00 1.40
2242 2380 2.942376 TGGCGCATGAGAAACGATAAAT 59.058 40.909 10.83 0.00 0.00 1.40
2243 2381 4.025229 GTGGCGCATGAGAAACGATAAATA 60.025 41.667 10.83 0.00 0.00 1.40
2244 2382 4.211164 TGGCGCATGAGAAACGATAAATAG 59.789 41.667 10.83 0.00 0.00 1.73
2245 2383 4.144555 GCGCATGAGAAACGATAAATAGC 58.855 43.478 0.30 0.00 0.00 2.97
2299 2456 4.720902 CATGCAGGACCACGGGCA 62.721 66.667 0.00 0.00 38.34 5.36
2300 2457 4.722700 ATGCAGGACCACGGGCAC 62.723 66.667 0.00 0.00 37.15 5.01
2360 2523 2.913060 GAGGACCCCCGATCTCCG 60.913 72.222 0.00 0.00 37.58 4.63
2677 2858 0.388134 CTACGGCGTGCACAAGTACT 60.388 55.000 24.86 0.00 0.00 2.73
2738 2919 2.363018 CTCAGGTCTCGGCCTCCA 60.363 66.667 0.00 0.00 36.58 3.86
2739 2920 2.680352 TCAGGTCTCGGCCTCCAC 60.680 66.667 0.00 0.00 36.58 4.02
2765 2946 2.456010 GAAGAGATCGTCTCCGCTTTC 58.544 52.381 10.24 5.63 44.42 2.62
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 3.197790 CAGGAAGCATGTCGCCGG 61.198 66.667 0.00 0.00 44.04 6.13
11 12 2.434884 ACAGGAAGCATGTCGCCG 60.435 61.111 0.00 0.00 44.04 6.46
12 13 0.955428 TTCACAGGAAGCATGTCGCC 60.955 55.000 0.00 0.00 44.04 5.54
13 14 0.166814 GTTCACAGGAAGCATGTCGC 59.833 55.000 0.00 0.00 42.91 5.19
14 15 1.511850 TGTTCACAGGAAGCATGTCG 58.488 50.000 0.00 0.00 32.62 4.35
15 16 2.030805 GGTTGTTCACAGGAAGCATGTC 60.031 50.000 0.00 0.00 32.62 3.06
16 17 1.956477 GGTTGTTCACAGGAAGCATGT 59.044 47.619 0.00 0.00 32.62 3.21
17 18 2.233271 AGGTTGTTCACAGGAAGCATG 58.767 47.619 0.00 0.00 32.62 4.06
18 19 2.624838 CAAGGTTGTTCACAGGAAGCAT 59.375 45.455 0.00 0.00 32.62 3.79
19 20 2.023673 CAAGGTTGTTCACAGGAAGCA 58.976 47.619 0.00 0.00 32.62 3.91
20 21 2.297701 TCAAGGTTGTTCACAGGAAGC 58.702 47.619 0.00 0.00 32.62 3.86
21 22 3.503748 GGATCAAGGTTGTTCACAGGAAG 59.496 47.826 0.00 0.00 32.62 3.46
22 23 3.117701 TGGATCAAGGTTGTTCACAGGAA 60.118 43.478 0.00 0.00 0.00 3.36
23 24 2.441375 TGGATCAAGGTTGTTCACAGGA 59.559 45.455 0.00 0.00 0.00 3.86
24 25 2.862541 TGGATCAAGGTTGTTCACAGG 58.137 47.619 0.00 0.00 0.00 4.00
25 26 3.304928 GCTTGGATCAAGGTTGTTCACAG 60.305 47.826 9.34 0.75 41.31 3.66
26 27 2.622942 GCTTGGATCAAGGTTGTTCACA 59.377 45.455 9.34 0.00 41.31 3.58
27 28 2.029918 GGCTTGGATCAAGGTTGTTCAC 60.030 50.000 9.34 0.00 41.31 3.18
28 29 2.238521 GGCTTGGATCAAGGTTGTTCA 58.761 47.619 9.34 0.00 41.31 3.18
29 30 1.200020 CGGCTTGGATCAAGGTTGTTC 59.800 52.381 9.34 0.00 41.31 3.18
30 31 1.202879 TCGGCTTGGATCAAGGTTGTT 60.203 47.619 9.34 0.00 41.31 2.83
31 32 0.400213 TCGGCTTGGATCAAGGTTGT 59.600 50.000 9.34 0.00 41.31 3.32
32 33 1.089920 CTCGGCTTGGATCAAGGTTG 58.910 55.000 9.34 0.00 41.31 3.77
33 34 0.678048 GCTCGGCTTGGATCAAGGTT 60.678 55.000 9.34 0.00 41.31 3.50
34 35 1.078143 GCTCGGCTTGGATCAAGGT 60.078 57.895 9.34 0.00 41.31 3.50
35 36 1.222936 AGCTCGGCTTGGATCAAGG 59.777 57.895 9.34 0.00 41.31 3.61
36 37 4.950479 AGCTCGGCTTGGATCAAG 57.050 55.556 3.50 3.50 43.57 3.02
45 46 4.837972 AGATCTAAAGAAAAAGCTCGGCT 58.162 39.130 0.00 0.00 42.56 5.52
46 47 5.581085 TGTAGATCTAAAGAAAAAGCTCGGC 59.419 40.000 3.40 0.00 0.00 5.54
47 48 7.042389 GGATGTAGATCTAAAGAAAAAGCTCGG 60.042 40.741 3.40 0.00 0.00 4.63
48 49 7.492669 TGGATGTAGATCTAAAGAAAAAGCTCG 59.507 37.037 3.40 0.00 0.00 5.03
49 50 8.608317 GTGGATGTAGATCTAAAGAAAAAGCTC 58.392 37.037 3.40 0.00 0.00 4.09
50 51 8.103305 TGTGGATGTAGATCTAAAGAAAAAGCT 58.897 33.333 3.40 0.00 0.00 3.74
51 52 8.268850 TGTGGATGTAGATCTAAAGAAAAAGC 57.731 34.615 3.40 0.00 0.00 3.51
52 53 8.394121 GCTGTGGATGTAGATCTAAAGAAAAAG 58.606 37.037 7.52 0.00 27.72 2.27
53 54 7.336931 GGCTGTGGATGTAGATCTAAAGAAAAA 59.663 37.037 7.52 0.00 27.72 1.94
54 55 6.823689 GGCTGTGGATGTAGATCTAAAGAAAA 59.176 38.462 7.52 0.00 27.72 2.29
55 56 6.156949 AGGCTGTGGATGTAGATCTAAAGAAA 59.843 38.462 7.52 0.00 27.72 2.52
56 57 5.663106 AGGCTGTGGATGTAGATCTAAAGAA 59.337 40.000 7.52 0.00 27.72 2.52
57 58 5.211973 AGGCTGTGGATGTAGATCTAAAGA 58.788 41.667 7.52 0.00 27.72 2.52
58 59 5.510520 GGAGGCTGTGGATGTAGATCTAAAG 60.511 48.000 3.40 0.00 29.35 1.85
59 60 4.345257 GGAGGCTGTGGATGTAGATCTAAA 59.655 45.833 3.40 0.00 0.00 1.85
60 61 3.898123 GGAGGCTGTGGATGTAGATCTAA 59.102 47.826 3.40 0.00 0.00 2.10
61 62 3.501349 GGAGGCTGTGGATGTAGATCTA 58.499 50.000 0.00 0.00 0.00 1.98
62 63 2.324541 GGAGGCTGTGGATGTAGATCT 58.675 52.381 0.00 0.00 0.00 2.75
63 64 1.000283 CGGAGGCTGTGGATGTAGATC 60.000 57.143 0.00 0.00 0.00 2.75
64 65 1.043816 CGGAGGCTGTGGATGTAGAT 58.956 55.000 0.00 0.00 0.00 1.98
65 66 0.033503 TCGGAGGCTGTGGATGTAGA 60.034 55.000 0.00 0.00 0.00 2.59
66 67 0.824109 TTCGGAGGCTGTGGATGTAG 59.176 55.000 0.00 0.00 0.00 2.74
67 68 0.535335 GTTCGGAGGCTGTGGATGTA 59.465 55.000 0.00 0.00 0.00 2.29
68 69 1.296715 GTTCGGAGGCTGTGGATGT 59.703 57.895 0.00 0.00 0.00 3.06
69 70 0.321564 TTGTTCGGAGGCTGTGGATG 60.322 55.000 0.00 0.00 0.00 3.51
70 71 0.321653 GTTGTTCGGAGGCTGTGGAT 60.322 55.000 0.00 0.00 0.00 3.41
71 72 1.070786 GTTGTTCGGAGGCTGTGGA 59.929 57.895 0.00 0.00 0.00 4.02
72 73 1.966451 GGTTGTTCGGAGGCTGTGG 60.966 63.158 0.00 0.00 0.00 4.17
73 74 0.320374 TAGGTTGTTCGGAGGCTGTG 59.680 55.000 0.00 0.00 0.00 3.66
74 75 1.053424 TTAGGTTGTTCGGAGGCTGT 58.947 50.000 0.00 0.00 0.00 4.40
75 76 1.002087 AGTTAGGTTGTTCGGAGGCTG 59.998 52.381 0.00 0.00 0.00 4.85
76 77 1.275573 GAGTTAGGTTGTTCGGAGGCT 59.724 52.381 0.00 0.00 0.00 4.58
77 78 1.001633 TGAGTTAGGTTGTTCGGAGGC 59.998 52.381 0.00 0.00 0.00 4.70
78 79 3.056107 TCATGAGTTAGGTTGTTCGGAGG 60.056 47.826 0.00 0.00 0.00 4.30
79 80 4.188247 TCATGAGTTAGGTTGTTCGGAG 57.812 45.455 0.00 0.00 0.00 4.63
80 81 4.819105 ATCATGAGTTAGGTTGTTCGGA 57.181 40.909 0.09 0.00 0.00 4.55
81 82 4.809426 GGTATCATGAGTTAGGTTGTTCGG 59.191 45.833 0.09 0.00 0.00 4.30
82 83 5.416083 TGGTATCATGAGTTAGGTTGTTCG 58.584 41.667 0.09 0.00 0.00 3.95
83 84 7.865706 AATGGTATCATGAGTTAGGTTGTTC 57.134 36.000 0.09 0.00 33.18 3.18
84 85 7.669722 ACAAATGGTATCATGAGTTAGGTTGTT 59.330 33.333 0.09 0.00 33.18 2.83
85 86 7.175104 ACAAATGGTATCATGAGTTAGGTTGT 58.825 34.615 0.09 5.28 33.18 3.32
86 87 7.630242 ACAAATGGTATCATGAGTTAGGTTG 57.370 36.000 0.09 4.66 33.18 3.77
87 88 9.396022 CTAACAAATGGTATCATGAGTTAGGTT 57.604 33.333 21.80 9.46 41.56 3.50
88 89 8.768397 TCTAACAAATGGTATCATGAGTTAGGT 58.232 33.333 25.45 5.26 43.12 3.08
89 90 9.613428 TTCTAACAAATGGTATCATGAGTTAGG 57.387 33.333 25.45 15.26 43.12 2.69
102 103 8.184192 CGCTTCAGATTAATTCTAACAAATGGT 58.816 33.333 0.00 0.00 31.77 3.55
103 104 7.166473 GCGCTTCAGATTAATTCTAACAAATGG 59.834 37.037 0.00 0.00 31.77 3.16
104 105 7.697710 TGCGCTTCAGATTAATTCTAACAAATG 59.302 33.333 9.73 0.00 31.77 2.32
105 106 7.761409 TGCGCTTCAGATTAATTCTAACAAAT 58.239 30.769 9.73 0.00 31.77 2.32
106 107 7.139896 TGCGCTTCAGATTAATTCTAACAAA 57.860 32.000 9.73 0.00 31.77 2.83
107 108 6.735678 TGCGCTTCAGATTAATTCTAACAA 57.264 33.333 9.73 0.00 31.77 2.83
108 109 6.371548 ACTTGCGCTTCAGATTAATTCTAACA 59.628 34.615 9.73 0.00 31.77 2.41
109 110 6.776094 ACTTGCGCTTCAGATTAATTCTAAC 58.224 36.000 9.73 0.00 31.77 2.34
110 111 6.237835 CGACTTGCGCTTCAGATTAATTCTAA 60.238 38.462 9.73 0.00 31.77 2.10
111 112 5.232202 CGACTTGCGCTTCAGATTAATTCTA 59.768 40.000 9.73 0.00 31.77 2.10
112 113 4.033358 CGACTTGCGCTTCAGATTAATTCT 59.967 41.667 9.73 0.00 33.90 2.40
113 114 4.032900 TCGACTTGCGCTTCAGATTAATTC 59.967 41.667 9.73 0.00 40.61 2.17
114 115 3.932710 TCGACTTGCGCTTCAGATTAATT 59.067 39.130 9.73 0.00 40.61 1.40
115 116 3.521560 TCGACTTGCGCTTCAGATTAAT 58.478 40.909 9.73 0.00 40.61 1.40
116 117 2.954316 TCGACTTGCGCTTCAGATTAA 58.046 42.857 9.73 0.00 40.61 1.40
117 118 2.647529 TCGACTTGCGCTTCAGATTA 57.352 45.000 9.73 0.00 40.61 1.75
118 119 1.929836 GATCGACTTGCGCTTCAGATT 59.070 47.619 9.73 0.00 40.61 2.40
119 120 1.135915 AGATCGACTTGCGCTTCAGAT 59.864 47.619 9.73 7.31 40.61 2.90
120 121 0.528017 AGATCGACTTGCGCTTCAGA 59.472 50.000 9.73 2.02 40.61 3.27
121 122 2.194800 TAGATCGACTTGCGCTTCAG 57.805 50.000 9.73 4.47 40.61 3.02
122 123 2.732366 GATAGATCGACTTGCGCTTCA 58.268 47.619 9.73 0.00 40.61 3.02
138 139 4.447054 GTGTGATTGCTTGATCCTCGATAG 59.553 45.833 0.00 0.00 0.00 2.08
139 140 4.141959 TGTGTGATTGCTTGATCCTCGATA 60.142 41.667 0.00 0.00 0.00 2.92
140 141 3.201290 GTGTGATTGCTTGATCCTCGAT 58.799 45.455 0.00 0.00 0.00 3.59
141 142 2.028203 TGTGTGATTGCTTGATCCTCGA 60.028 45.455 0.00 0.00 0.00 4.04
142 143 2.349590 TGTGTGATTGCTTGATCCTCG 58.650 47.619 0.00 0.00 0.00 4.63
143 144 3.427233 GCTTGTGTGATTGCTTGATCCTC 60.427 47.826 0.00 0.00 0.00 3.71
144 145 2.490903 GCTTGTGTGATTGCTTGATCCT 59.509 45.455 0.00 0.00 0.00 3.24
145 146 2.229543 TGCTTGTGTGATTGCTTGATCC 59.770 45.455 0.00 0.00 0.00 3.36
146 147 3.240069 GTGCTTGTGTGATTGCTTGATC 58.760 45.455 0.00 0.00 0.00 2.92
147 148 2.351060 CGTGCTTGTGTGATTGCTTGAT 60.351 45.455 0.00 0.00 0.00 2.57
148 149 1.002576 CGTGCTTGTGTGATTGCTTGA 60.003 47.619 0.00 0.00 0.00 3.02
149 150 1.002576 TCGTGCTTGTGTGATTGCTTG 60.003 47.619 0.00 0.00 0.00 4.01
150 151 1.002468 GTCGTGCTTGTGTGATTGCTT 60.002 47.619 0.00 0.00 0.00 3.91
151 152 0.588252 GTCGTGCTTGTGTGATTGCT 59.412 50.000 0.00 0.00 0.00 3.91
152 153 0.307453 TGTCGTGCTTGTGTGATTGC 59.693 50.000 0.00 0.00 0.00 3.56
153 154 1.334059 GGTGTCGTGCTTGTGTGATTG 60.334 52.381 0.00 0.00 0.00 2.67
154 155 0.944386 GGTGTCGTGCTTGTGTGATT 59.056 50.000 0.00 0.00 0.00 2.57
155 156 1.221466 CGGTGTCGTGCTTGTGTGAT 61.221 55.000 0.00 0.00 0.00 3.06
156 157 1.880796 CGGTGTCGTGCTTGTGTGA 60.881 57.895 0.00 0.00 0.00 3.58
157 158 1.821241 CTCGGTGTCGTGCTTGTGTG 61.821 60.000 0.00 0.00 37.69 3.82
158 159 1.591594 CTCGGTGTCGTGCTTGTGT 60.592 57.895 0.00 0.00 37.69 3.72
159 160 0.667487 ATCTCGGTGTCGTGCTTGTG 60.667 55.000 0.00 0.00 37.69 3.33
160 161 0.033504 AATCTCGGTGTCGTGCTTGT 59.966 50.000 0.00 0.00 37.69 3.16
161 162 1.136252 CAAATCTCGGTGTCGTGCTTG 60.136 52.381 0.00 0.00 37.69 4.01
162 163 1.148310 CAAATCTCGGTGTCGTGCTT 58.852 50.000 0.00 0.00 37.69 3.91
163 164 0.033504 ACAAATCTCGGTGTCGTGCT 59.966 50.000 0.00 0.00 37.69 4.40
164 165 0.865769 AACAAATCTCGGTGTCGTGC 59.134 50.000 0.00 0.00 37.69 5.34
165 166 3.421312 CGTTAACAAATCTCGGTGTCGTG 60.421 47.826 6.39 0.00 37.69 4.35
166 167 2.727798 CGTTAACAAATCTCGGTGTCGT 59.272 45.455 6.39 0.00 37.69 4.34
167 168 2.981805 TCGTTAACAAATCTCGGTGTCG 59.018 45.455 6.39 0.00 37.82 4.35
168 169 3.367025 CCTCGTTAACAAATCTCGGTGTC 59.633 47.826 6.39 0.00 0.00 3.67
169 170 3.243975 ACCTCGTTAACAAATCTCGGTGT 60.244 43.478 6.39 0.00 0.00 4.16
170 171 3.323243 ACCTCGTTAACAAATCTCGGTG 58.677 45.455 6.39 0.00 0.00 4.94
171 172 3.672767 ACCTCGTTAACAAATCTCGGT 57.327 42.857 6.39 0.00 0.00 4.69
172 173 3.991773 TGAACCTCGTTAACAAATCTCGG 59.008 43.478 6.39 0.00 0.00 4.63
173 174 4.143179 GGTGAACCTCGTTAACAAATCTCG 60.143 45.833 6.39 0.00 28.88 4.04
174 175 4.143179 CGGTGAACCTCGTTAACAAATCTC 60.143 45.833 6.39 0.00 28.88 2.75
175 176 3.744426 CGGTGAACCTCGTTAACAAATCT 59.256 43.478 6.39 0.00 28.88 2.40
176 177 3.742369 TCGGTGAACCTCGTTAACAAATC 59.258 43.478 6.39 0.00 28.88 2.17
177 178 3.731089 TCGGTGAACCTCGTTAACAAAT 58.269 40.909 6.39 0.00 28.88 2.32
178 179 3.176552 TCGGTGAACCTCGTTAACAAA 57.823 42.857 6.39 0.00 28.88 2.83
179 180 2.886862 TCGGTGAACCTCGTTAACAA 57.113 45.000 6.39 0.00 28.88 2.83
180 181 2.036217 ACATCGGTGAACCTCGTTAACA 59.964 45.455 0.65 0.00 28.88 2.41
181 182 2.680577 ACATCGGTGAACCTCGTTAAC 58.319 47.619 0.65 0.00 0.00 2.01
199 200 1.676678 GCTCCGGAGATGTAGCCACA 61.677 60.000 35.69 0.00 39.52 4.17
200 201 1.068250 GCTCCGGAGATGTAGCCAC 59.932 63.158 35.69 9.98 0.00 5.01
201 202 3.538614 GCTCCGGAGATGTAGCCA 58.461 61.111 35.69 0.00 0.00 4.75
203 204 1.000052 GTTAGGCTCCGGAGATGTAGC 60.000 57.143 35.69 19.05 0.00 3.58
204 205 2.588620 AGTTAGGCTCCGGAGATGTAG 58.411 52.381 35.69 8.91 0.00 2.74
205 206 2.750141 AGTTAGGCTCCGGAGATGTA 57.250 50.000 35.69 18.47 0.00 2.29
206 207 2.308690 GTAGTTAGGCTCCGGAGATGT 58.691 52.381 35.69 19.53 0.00 3.06
207 208 1.267261 CGTAGTTAGGCTCCGGAGATG 59.733 57.143 35.69 13.53 0.00 2.90
208 209 1.606903 CGTAGTTAGGCTCCGGAGAT 58.393 55.000 35.69 23.54 0.00 2.75
209 210 3.091318 CGTAGTTAGGCTCCGGAGA 57.909 57.895 35.69 11.93 0.00 3.71
212 213 3.126528 CCCGTAGTTAGGCTCCGG 58.873 66.667 0.00 0.00 45.00 5.14
213 214 2.416260 GCCCGTAGTTAGGCTCCG 59.584 66.667 0.00 0.00 46.14 4.63
217 218 2.279318 GAGCGCCCGTAGTTAGGC 60.279 66.667 2.29 0.00 46.17 3.93
218 219 2.073037 GAGGAGCGCCCGTAGTTAGG 62.073 65.000 2.29 0.00 40.87 2.69
219 220 1.359475 GAGGAGCGCCCGTAGTTAG 59.641 63.158 2.29 0.00 40.87 2.34
220 221 2.123428 GGAGGAGCGCCCGTAGTTA 61.123 63.158 2.29 0.00 40.87 2.24
221 222 3.459063 GGAGGAGCGCCCGTAGTT 61.459 66.667 2.29 0.00 40.87 2.24
229 230 2.115291 GTTTCATGGGGAGGAGCGC 61.115 63.158 0.00 0.00 0.00 5.92
230 231 1.452108 GGTTTCATGGGGAGGAGCG 60.452 63.158 0.00 0.00 0.00 5.03
231 232 1.452108 CGGTTTCATGGGGAGGAGC 60.452 63.158 0.00 0.00 0.00 4.70
232 233 1.452108 GCGGTTTCATGGGGAGGAG 60.452 63.158 0.00 0.00 0.00 3.69
233 234 0.619255 TAGCGGTTTCATGGGGAGGA 60.619 55.000 0.00 0.00 0.00 3.71
234 235 0.463833 GTAGCGGTTTCATGGGGAGG 60.464 60.000 0.00 0.00 0.00 4.30
235 236 0.251916 TGTAGCGGTTTCATGGGGAG 59.748 55.000 0.00 0.00 0.00 4.30
236 237 0.693622 TTGTAGCGGTTTCATGGGGA 59.306 50.000 0.00 0.00 0.00 4.81
237 238 1.762708 ATTGTAGCGGTTTCATGGGG 58.237 50.000 0.00 0.00 0.00 4.96
238 239 2.616842 GGTATTGTAGCGGTTTCATGGG 59.383 50.000 0.00 0.00 0.00 4.00
239 240 2.286833 CGGTATTGTAGCGGTTTCATGG 59.713 50.000 0.00 0.00 45.08 3.66
240 241 3.585748 CGGTATTGTAGCGGTTTCATG 57.414 47.619 0.00 0.00 45.08 3.07
249 250 1.885850 CGGGGTGCGGTATTGTAGC 60.886 63.158 0.00 0.00 0.00 3.58
250 251 1.227438 CCGGGGTGCGGTATTGTAG 60.227 63.158 0.00 0.00 0.00 2.74
251 252 1.958902 GACCGGGGTGCGGTATTGTA 61.959 60.000 6.32 0.00 40.18 2.41
252 253 3.319441 GACCGGGGTGCGGTATTGT 62.319 63.158 6.32 0.00 40.18 2.71
253 254 2.512974 GACCGGGGTGCGGTATTG 60.513 66.667 6.32 0.00 40.18 1.90
254 255 4.151582 CGACCGGGGTGCGGTATT 62.152 66.667 6.32 0.00 40.18 1.89
304 305 2.583868 TAATAGCACGGGCACGCG 60.584 61.111 14.57 3.53 46.04 6.01
305 306 1.157870 ATGTAATAGCACGGGCACGC 61.158 55.000 14.57 0.00 46.04 5.34
306 307 1.003972 CAATGTAATAGCACGGGCACG 60.004 52.381 14.57 6.92 44.61 5.34
307 308 1.333619 CCAATGTAATAGCACGGGCAC 59.666 52.381 14.57 0.36 44.61 5.01
308 309 1.674359 CCAATGTAATAGCACGGGCA 58.326 50.000 14.57 0.00 44.61 5.36
309 310 0.310854 GCCAATGTAATAGCACGGGC 59.689 55.000 0.00 0.00 41.61 6.13
310 311 1.674359 TGCCAATGTAATAGCACGGG 58.326 50.000 0.00 0.00 31.61 5.28
311 312 4.065088 ACTATGCCAATGTAATAGCACGG 58.935 43.478 0.00 0.00 38.36 4.94
312 313 5.673337 AACTATGCCAATGTAATAGCACG 57.327 39.130 0.00 0.00 38.36 5.34
313 314 7.490962 TGTAACTATGCCAATGTAATAGCAC 57.509 36.000 0.00 1.13 38.36 4.40
314 315 7.936301 TGATGTAACTATGCCAATGTAATAGCA 59.064 33.333 0.00 0.00 39.62 3.49
315 316 8.322906 TGATGTAACTATGCCAATGTAATAGC 57.677 34.615 0.92 0.00 0.00 2.97
317 318 9.791801 ACATGATGTAACTATGCCAATGTAATA 57.208 29.630 0.00 0.00 0.00 0.98
318 319 8.570488 CACATGATGTAACTATGCCAATGTAAT 58.430 33.333 0.00 0.00 0.00 1.89
319 320 7.555914 ACACATGATGTAACTATGCCAATGTAA 59.444 33.333 0.00 0.00 40.88 2.41
320 321 7.053498 ACACATGATGTAACTATGCCAATGTA 58.947 34.615 0.00 0.00 40.88 2.29
321 322 5.887598 ACACATGATGTAACTATGCCAATGT 59.112 36.000 0.00 0.00 40.88 2.71
322 323 6.261603 AGACACATGATGTAACTATGCCAATG 59.738 38.462 0.00 0.00 43.56 2.82
323 324 6.359804 AGACACATGATGTAACTATGCCAAT 58.640 36.000 0.00 0.00 43.56 3.16
324 325 5.744171 AGACACATGATGTAACTATGCCAA 58.256 37.500 0.00 0.00 43.56 4.52
325 326 5.357742 AGACACATGATGTAACTATGCCA 57.642 39.130 0.00 0.00 43.56 4.92
326 327 5.406780 GCTAGACACATGATGTAACTATGCC 59.593 44.000 0.00 0.00 43.56 4.40
327 328 5.406780 GGCTAGACACATGATGTAACTATGC 59.593 44.000 0.00 9.75 43.56 3.14
328 329 5.928839 GGGCTAGACACATGATGTAACTATG 59.071 44.000 0.00 1.86 43.56 2.23
329 330 5.012148 GGGGCTAGACACATGATGTAACTAT 59.988 44.000 0.00 0.00 43.56 2.12
330 331 4.344102 GGGGCTAGACACATGATGTAACTA 59.656 45.833 0.00 4.46 43.56 2.24
331 332 3.134804 GGGGCTAGACACATGATGTAACT 59.865 47.826 0.00 3.46 43.56 2.24
332 333 3.118408 TGGGGCTAGACACATGATGTAAC 60.118 47.826 0.00 0.00 43.56 2.50
333 334 3.111484 TGGGGCTAGACACATGATGTAA 58.889 45.455 0.00 0.00 43.56 2.41
334 335 2.434336 GTGGGGCTAGACACATGATGTA 59.566 50.000 2.35 0.00 43.56 2.29
336 337 1.487976 AGTGGGGCTAGACACATGATG 59.512 52.381 2.35 0.00 39.99 3.07
337 338 1.885049 AGTGGGGCTAGACACATGAT 58.115 50.000 2.35 0.00 39.99 2.45
338 339 2.543037 TAGTGGGGCTAGACACATGA 57.457 50.000 2.35 0.00 39.99 3.07
339 340 6.798427 ATATATAGTGGGGCTAGACACATG 57.202 41.667 2.35 0.00 39.99 3.21
340 341 8.344546 TCTTATATATAGTGGGGCTAGACACAT 58.655 37.037 2.35 0.00 39.99 3.21
341 342 7.705700 TCTTATATATAGTGGGGCTAGACACA 58.294 38.462 0.00 0.00 39.99 3.72
342 343 7.285858 CCTCTTATATATAGTGGGGCTAGACAC 59.714 44.444 0.00 0.00 37.86 3.67
343 344 7.036059 ACCTCTTATATATAGTGGGGCTAGACA 60.036 40.741 0.00 0.00 32.45 3.41
344 345 7.355890 ACCTCTTATATATAGTGGGGCTAGAC 58.644 42.308 11.50 0.00 32.45 2.59
345 346 7.409397 AGACCTCTTATATATAGTGGGGCTAGA 59.591 40.741 11.32 1.68 32.45 2.43
346 347 7.588169 AGACCTCTTATATATAGTGGGGCTAG 58.412 42.308 11.32 0.00 32.45 3.42
347 348 7.541271 AGACCTCTTATATATAGTGGGGCTA 57.459 40.000 11.32 0.00 31.99 3.93
348 349 6.424826 AGACCTCTTATATATAGTGGGGCT 57.575 41.667 11.50 10.03 31.99 5.19
349 350 6.262720 CGTAGACCTCTTATATATAGTGGGGC 59.737 46.154 11.50 8.40 31.99 5.80
350 351 7.571919 TCGTAGACCTCTTATATATAGTGGGG 58.428 42.308 10.49 10.49 31.99 4.96
358 359 8.944029 GCACTTGTATCGTAGACCTCTTATATA 58.056 37.037 0.00 0.00 42.51 0.86
359 360 7.094291 GGCACTTGTATCGTAGACCTCTTATAT 60.094 40.741 0.00 0.00 42.51 0.86
360 361 6.206243 GGCACTTGTATCGTAGACCTCTTATA 59.794 42.308 0.00 0.00 42.51 0.98
361 362 5.009811 GGCACTTGTATCGTAGACCTCTTAT 59.990 44.000 0.00 0.00 42.51 1.73
362 363 4.337555 GGCACTTGTATCGTAGACCTCTTA 59.662 45.833 0.00 0.00 42.51 2.10
363 364 3.130693 GGCACTTGTATCGTAGACCTCTT 59.869 47.826 0.00 0.00 42.51 2.85
364 365 2.688958 GGCACTTGTATCGTAGACCTCT 59.311 50.000 0.00 0.00 42.51 3.69
365 366 2.223758 GGGCACTTGTATCGTAGACCTC 60.224 54.545 0.00 0.00 42.51 3.85
366 367 1.755380 GGGCACTTGTATCGTAGACCT 59.245 52.381 0.00 0.00 42.51 3.85
367 368 1.755380 AGGGCACTTGTATCGTAGACC 59.245 52.381 0.00 0.00 42.51 3.85
368 369 3.631227 AGTAGGGCACTTGTATCGTAGAC 59.369 47.826 0.00 0.00 33.39 2.59
369 370 3.894759 AGTAGGGCACTTGTATCGTAGA 58.105 45.455 0.00 0.00 35.16 2.59
370 371 4.650754 AAGTAGGGCACTTGTATCGTAG 57.349 45.455 0.00 0.00 46.01 3.51
383 384 2.789409 AAGTCATGTCCAAGTAGGGC 57.211 50.000 0.00 0.00 44.53 5.19
384 385 8.432805 AGAATATAAAGTCATGTCCAAGTAGGG 58.567 37.037 0.00 0.00 38.24 3.53
385 386 9.265901 CAGAATATAAAGTCATGTCCAAGTAGG 57.734 37.037 0.00 0.00 39.47 3.18
386 387 9.823647 ACAGAATATAAAGTCATGTCCAAGTAG 57.176 33.333 0.00 0.00 0.00 2.57
387 388 9.817809 GACAGAATATAAAGTCATGTCCAAGTA 57.182 33.333 0.00 0.00 31.60 2.24
388 389 8.321353 TGACAGAATATAAAGTCATGTCCAAGT 58.679 33.333 0.00 0.00 36.20 3.16
389 390 8.607459 GTGACAGAATATAAAGTCATGTCCAAG 58.393 37.037 0.00 0.00 42.28 3.61
390 391 8.100164 TGTGACAGAATATAAAGTCATGTCCAA 58.900 33.333 0.00 0.00 42.28 3.53
391 392 7.549134 GTGTGACAGAATATAAAGTCATGTCCA 59.451 37.037 0.00 0.00 42.28 4.02
392 393 7.549134 TGTGTGACAGAATATAAAGTCATGTCC 59.451 37.037 0.00 0.00 42.28 4.02
393 394 8.383619 GTGTGTGACAGAATATAAAGTCATGTC 58.616 37.037 0.00 0.00 42.28 3.06
394 395 7.334421 GGTGTGTGACAGAATATAAAGTCATGT 59.666 37.037 0.00 0.00 42.28 3.21
395 396 7.464577 CGGTGTGTGACAGAATATAAAGTCATG 60.465 40.741 0.00 0.00 42.28 3.07
396 397 6.535150 CGGTGTGTGACAGAATATAAAGTCAT 59.465 38.462 0.00 0.00 42.28 3.06
397 398 5.867174 CGGTGTGTGACAGAATATAAAGTCA 59.133 40.000 0.00 0.00 38.56 3.41
398 399 5.867716 ACGGTGTGTGACAGAATATAAAGTC 59.132 40.000 0.00 0.00 0.00 3.01
399 400 5.790593 ACGGTGTGTGACAGAATATAAAGT 58.209 37.500 0.00 0.00 0.00 2.66
400 401 6.020916 CGTACGGTGTGTGACAGAATATAAAG 60.021 42.308 7.57 0.00 0.00 1.85
401 402 5.801444 CGTACGGTGTGTGACAGAATATAAA 59.199 40.000 7.57 0.00 0.00 1.40
402 403 5.123661 TCGTACGGTGTGTGACAGAATATAA 59.876 40.000 16.52 0.00 0.00 0.98
403 404 4.635324 TCGTACGGTGTGTGACAGAATATA 59.365 41.667 16.52 0.00 0.00 0.86
404 405 3.441222 TCGTACGGTGTGTGACAGAATAT 59.559 43.478 16.52 0.00 0.00 1.28
405 406 2.813172 TCGTACGGTGTGTGACAGAATA 59.187 45.455 16.52 0.00 0.00 1.75
406 407 1.610038 TCGTACGGTGTGTGACAGAAT 59.390 47.619 16.52 0.00 0.00 2.40
407 408 1.023502 TCGTACGGTGTGTGACAGAA 58.976 50.000 16.52 0.00 0.00 3.02
408 409 1.241165 ATCGTACGGTGTGTGACAGA 58.759 50.000 16.52 0.00 0.00 3.41
409 410 1.983605 GAATCGTACGGTGTGTGACAG 59.016 52.381 16.52 0.00 0.00 3.51
410 411 1.610038 AGAATCGTACGGTGTGTGACA 59.390 47.619 16.52 0.00 0.00 3.58
411 412 2.342910 AGAATCGTACGGTGTGTGAC 57.657 50.000 16.52 0.00 0.00 3.67
412 413 3.503363 ACTTAGAATCGTACGGTGTGTGA 59.497 43.478 16.52 0.00 0.00 3.58
413 414 3.829948 ACTTAGAATCGTACGGTGTGTG 58.170 45.455 16.52 1.50 0.00 3.82
414 415 3.119708 GGACTTAGAATCGTACGGTGTGT 60.120 47.826 16.52 3.75 0.00 3.72
415 416 3.119743 TGGACTTAGAATCGTACGGTGTG 60.120 47.826 16.52 0.41 0.00 3.82
416 417 3.084039 TGGACTTAGAATCGTACGGTGT 58.916 45.455 16.52 1.15 0.00 4.16
417 418 3.770263 TGGACTTAGAATCGTACGGTG 57.230 47.619 16.52 0.00 0.00 4.94
418 419 3.119352 GGTTGGACTTAGAATCGTACGGT 60.119 47.826 16.52 4.91 0.00 4.83
419 420 3.442100 GGTTGGACTTAGAATCGTACGG 58.558 50.000 16.52 0.00 0.00 4.02
420 421 3.103738 CGGTTGGACTTAGAATCGTACG 58.896 50.000 9.53 9.53 0.00 3.67
421 422 4.102035 ACGGTTGGACTTAGAATCGTAC 57.898 45.455 0.00 0.00 37.15 3.67
422 423 5.393027 GGTTACGGTTGGACTTAGAATCGTA 60.393 44.000 0.00 0.00 39.53 3.43
423 424 4.488879 GTTACGGTTGGACTTAGAATCGT 58.511 43.478 0.00 0.00 41.58 3.73
424 425 3.861689 GGTTACGGTTGGACTTAGAATCG 59.138 47.826 0.00 0.00 0.00 3.34
425 426 5.082251 AGGTTACGGTTGGACTTAGAATC 57.918 43.478 0.00 0.00 0.00 2.52
426 427 6.610425 AGATAGGTTACGGTTGGACTTAGAAT 59.390 38.462 0.00 0.00 0.00 2.40
427 428 5.954150 AGATAGGTTACGGTTGGACTTAGAA 59.046 40.000 0.00 0.00 0.00 2.10
428 429 5.513233 AGATAGGTTACGGTTGGACTTAGA 58.487 41.667 0.00 0.00 0.00 2.10
429 430 5.848833 AGATAGGTTACGGTTGGACTTAG 57.151 43.478 0.00 0.00 0.00 2.18
430 431 5.481473 ACAAGATAGGTTACGGTTGGACTTA 59.519 40.000 0.00 0.00 0.00 2.24
431 432 4.285260 ACAAGATAGGTTACGGTTGGACTT 59.715 41.667 0.00 0.00 0.00 3.01
432 433 3.836562 ACAAGATAGGTTACGGTTGGACT 59.163 43.478 0.00 0.00 0.00 3.85
433 434 4.198028 ACAAGATAGGTTACGGTTGGAC 57.802 45.455 0.00 0.00 0.00 4.02
434 435 7.658525 TTATACAAGATAGGTTACGGTTGGA 57.341 36.000 0.00 0.00 0.00 3.53
435 436 9.985730 TTATTATACAAGATAGGTTACGGTTGG 57.014 33.333 0.00 0.00 0.00 3.77
460 461 8.832521 TCGTTTGTTAGAGTTGTGTCAAATATT 58.167 29.630 0.00 0.00 0.00 1.28
461 462 8.373048 TCGTTTGTTAGAGTTGTGTCAAATAT 57.627 30.769 0.00 0.00 0.00 1.28
462 463 7.773864 TCGTTTGTTAGAGTTGTGTCAAATA 57.226 32.000 0.00 0.00 0.00 1.40
463 464 6.671614 TCGTTTGTTAGAGTTGTGTCAAAT 57.328 33.333 0.00 0.00 0.00 2.32
464 465 6.483385 TTCGTTTGTTAGAGTTGTGTCAAA 57.517 33.333 0.00 0.00 0.00 2.69
465 466 6.073167 TGTTTCGTTTGTTAGAGTTGTGTCAA 60.073 34.615 0.00 0.00 0.00 3.18
466 467 5.408909 TGTTTCGTTTGTTAGAGTTGTGTCA 59.591 36.000 0.00 0.00 0.00 3.58
467 468 5.860641 TGTTTCGTTTGTTAGAGTTGTGTC 58.139 37.500 0.00 0.00 0.00 3.67
468 469 5.866335 TGTTTCGTTTGTTAGAGTTGTGT 57.134 34.783 0.00 0.00 0.00 3.72
469 470 7.586300 CCTATTGTTTCGTTTGTTAGAGTTGTG 59.414 37.037 0.00 0.00 0.00 3.33
470 471 7.496591 TCCTATTGTTTCGTTTGTTAGAGTTGT 59.503 33.333 0.00 0.00 0.00 3.32
471 472 7.857569 TCCTATTGTTTCGTTTGTTAGAGTTG 58.142 34.615 0.00 0.00 0.00 3.16
472 473 8.617290 ATCCTATTGTTTCGTTTGTTAGAGTT 57.383 30.769 0.00 0.00 0.00 3.01
473 474 8.617290 AATCCTATTGTTTCGTTTGTTAGAGT 57.383 30.769 0.00 0.00 0.00 3.24
474 475 9.893305 AAAATCCTATTGTTTCGTTTGTTAGAG 57.107 29.630 0.00 0.00 0.00 2.43
475 476 9.672086 CAAAATCCTATTGTTTCGTTTGTTAGA 57.328 29.630 0.00 0.00 0.00 2.10
476 477 9.458374 ACAAAATCCTATTGTTTCGTTTGTTAG 57.542 29.630 0.00 0.00 37.74 2.34
477 478 9.804758 AACAAAATCCTATTGTTTCGTTTGTTA 57.195 25.926 8.88 0.00 45.97 2.41
478 479 8.710835 AACAAAATCCTATTGTTTCGTTTGTT 57.289 26.923 5.59 5.59 45.97 2.83
488 489 8.635765 TGAAGCTAGAAACAAAATCCTATTGT 57.364 30.769 0.00 0.00 42.56 2.71
489 490 7.699812 GCTGAAGCTAGAAACAAAATCCTATTG 59.300 37.037 0.00 0.00 38.21 1.90
490 491 7.394359 TGCTGAAGCTAGAAACAAAATCCTATT 59.606 33.333 3.61 0.00 42.66 1.73
491 492 6.886459 TGCTGAAGCTAGAAACAAAATCCTAT 59.114 34.615 3.61 0.00 42.66 2.57
492 493 6.237901 TGCTGAAGCTAGAAACAAAATCCTA 58.762 36.000 3.61 0.00 42.66 2.94
493 494 5.072741 TGCTGAAGCTAGAAACAAAATCCT 58.927 37.500 3.61 0.00 42.66 3.24
494 495 5.182001 TCTGCTGAAGCTAGAAACAAAATCC 59.818 40.000 3.61 0.00 42.66 3.01
495 496 6.246420 TCTGCTGAAGCTAGAAACAAAATC 57.754 37.500 3.61 0.00 42.66 2.17
496 497 5.335504 GCTCTGCTGAAGCTAGAAACAAAAT 60.336 40.000 3.61 0.00 42.66 1.82
497 498 4.023707 GCTCTGCTGAAGCTAGAAACAAAA 60.024 41.667 3.61 0.00 42.66 2.44
498 499 3.499918 GCTCTGCTGAAGCTAGAAACAAA 59.500 43.478 3.61 0.00 42.66 2.83
499 500 3.070018 GCTCTGCTGAAGCTAGAAACAA 58.930 45.455 3.61 0.00 42.66 2.83
500 501 2.693069 GCTCTGCTGAAGCTAGAAACA 58.307 47.619 3.61 0.00 42.66 2.83
501 502 1.658095 CGCTCTGCTGAAGCTAGAAAC 59.342 52.381 3.61 0.79 42.66 2.78
502 503 1.273606 ACGCTCTGCTGAAGCTAGAAA 59.726 47.619 3.61 0.00 42.66 2.52
503 504 0.891373 ACGCTCTGCTGAAGCTAGAA 59.109 50.000 3.61 0.00 42.66 2.10
504 505 0.172127 CACGCTCTGCTGAAGCTAGA 59.828 55.000 3.61 4.43 42.66 2.43
505 506 0.805322 CCACGCTCTGCTGAAGCTAG 60.805 60.000 3.61 2.74 42.66 3.42
506 507 1.216444 CCACGCTCTGCTGAAGCTA 59.784 57.895 3.61 0.00 42.66 3.32
507 508 2.047465 CCACGCTCTGCTGAAGCT 60.047 61.111 3.61 0.00 42.66 3.74
508 509 1.963338 AACCACGCTCTGCTGAAGC 60.963 57.895 0.00 0.00 42.50 3.86
509 510 0.882042 ACAACCACGCTCTGCTGAAG 60.882 55.000 0.00 0.00 0.00 3.02
510 511 1.146041 ACAACCACGCTCTGCTGAA 59.854 52.632 0.00 0.00 0.00 3.02
511 512 1.595109 CACAACCACGCTCTGCTGA 60.595 57.895 0.00 0.00 0.00 4.26
512 513 1.439353 AACACAACCACGCTCTGCTG 61.439 55.000 0.00 0.00 0.00 4.41
513 514 0.105964 TAACACAACCACGCTCTGCT 59.894 50.000 0.00 0.00 0.00 4.24
514 515 0.941542 TTAACACAACCACGCTCTGC 59.058 50.000 0.00 0.00 0.00 4.26
515 516 2.479837 TCTTAACACAACCACGCTCTG 58.520 47.619 0.00 0.00 0.00 3.35
516 517 2.902705 TCTTAACACAACCACGCTCT 57.097 45.000 0.00 0.00 0.00 4.09
517 518 3.128349 TCTTCTTAACACAACCACGCTC 58.872 45.455 0.00 0.00 0.00 5.03
518 519 3.188159 TCTTCTTAACACAACCACGCT 57.812 42.857 0.00 0.00 0.00 5.07
519 520 3.955771 TTCTTCTTAACACAACCACGC 57.044 42.857 0.00 0.00 0.00 5.34
520 521 4.261031 CCCTTTCTTCTTAACACAACCACG 60.261 45.833 0.00 0.00 0.00 4.94
521 522 4.643334 ACCCTTTCTTCTTAACACAACCAC 59.357 41.667 0.00 0.00 0.00 4.16
522 523 4.862371 ACCCTTTCTTCTTAACACAACCA 58.138 39.130 0.00 0.00 0.00 3.67
523 524 8.803397 ATATACCCTTTCTTCTTAACACAACC 57.197 34.615 0.00 0.00 0.00 3.77
525 526 9.590451 CGTATATACCCTTTCTTCTTAACACAA 57.410 33.333 7.30 0.00 0.00 3.33
526 527 8.752187 ACGTATATACCCTTTCTTCTTAACACA 58.248 33.333 7.30 0.00 0.00 3.72
527 528 9.591792 AACGTATATACCCTTTCTTCTTAACAC 57.408 33.333 7.30 0.00 0.00 3.32
528 529 9.807649 GAACGTATATACCCTTTCTTCTTAACA 57.192 33.333 7.30 0.00 0.00 2.41
529 530 9.807649 TGAACGTATATACCCTTTCTTCTTAAC 57.192 33.333 7.30 0.00 0.00 2.01
532 533 8.148999 GGATGAACGTATATACCCTTTCTTCTT 58.851 37.037 19.24 8.06 0.00 2.52
533 534 7.509659 AGGATGAACGTATATACCCTTTCTTCT 59.490 37.037 19.24 11.71 0.00 2.85
534 535 7.599245 CAGGATGAACGTATATACCCTTTCTTC 59.401 40.741 7.30 12.79 39.69 2.87
535 536 7.442656 CAGGATGAACGTATATACCCTTTCTT 58.557 38.462 7.30 6.11 39.69 2.52
536 537 6.014499 CCAGGATGAACGTATATACCCTTTCT 60.014 42.308 7.30 0.00 39.69 2.52
537 538 6.164176 CCAGGATGAACGTATATACCCTTTC 58.836 44.000 7.30 8.07 39.69 2.62
538 539 5.512576 GCCAGGATGAACGTATATACCCTTT 60.513 44.000 7.30 0.00 39.69 3.11
539 540 4.020485 GCCAGGATGAACGTATATACCCTT 60.020 45.833 7.30 0.00 39.69 3.95
540 541 3.514309 GCCAGGATGAACGTATATACCCT 59.486 47.826 7.30 4.08 39.69 4.34
541 542 3.259876 TGCCAGGATGAACGTATATACCC 59.740 47.826 7.30 1.83 39.69 3.69
542 543 4.021368 ACTGCCAGGATGAACGTATATACC 60.021 45.833 7.30 0.00 39.69 2.73
543 544 5.135508 ACTGCCAGGATGAACGTATATAC 57.864 43.478 2.53 2.53 39.69 1.47
544 545 6.904463 TTACTGCCAGGATGAACGTATATA 57.096 37.500 0.00 0.00 39.69 0.86
545 546 5.801531 TTACTGCCAGGATGAACGTATAT 57.198 39.130 0.00 0.00 39.69 0.86
546 547 5.601583 TTTACTGCCAGGATGAACGTATA 57.398 39.130 0.00 0.00 39.69 1.47
547 548 4.481368 TTTACTGCCAGGATGAACGTAT 57.519 40.909 0.00 0.00 39.69 3.06
548 549 3.965379 TTTACTGCCAGGATGAACGTA 57.035 42.857 0.00 0.00 39.69 3.57
549 550 2.851263 TTTACTGCCAGGATGAACGT 57.149 45.000 0.00 0.00 39.69 3.99
550 551 5.811399 TTATTTTACTGCCAGGATGAACG 57.189 39.130 0.00 0.00 39.69 3.95
551 552 7.771183 TGAATTATTTTACTGCCAGGATGAAC 58.229 34.615 0.00 0.00 39.69 3.18
552 553 7.953005 TGAATTATTTTACTGCCAGGATGAA 57.047 32.000 0.00 0.00 39.69 2.57
553 554 7.953005 TTGAATTATTTTACTGCCAGGATGA 57.047 32.000 0.00 0.00 39.69 2.92
554 555 9.903682 CTATTGAATTATTTTACTGCCAGGATG 57.096 33.333 0.00 0.00 0.00 3.51
555 556 9.866655 TCTATTGAATTATTTTACTGCCAGGAT 57.133 29.630 0.00 0.00 0.00 3.24
556 557 9.342308 CTCTATTGAATTATTTTACTGCCAGGA 57.658 33.333 0.00 0.00 0.00 3.86
557 558 9.342308 TCTCTATTGAATTATTTTACTGCCAGG 57.658 33.333 0.00 0.00 0.00 4.45
559 560 9.342308 CCTCTCTATTGAATTATTTTACTGCCA 57.658 33.333 0.00 0.00 0.00 4.92
560 561 8.293157 GCCTCTCTATTGAATTATTTTACTGCC 58.707 37.037 0.00 0.00 0.00 4.85
561 562 8.293157 GGCCTCTCTATTGAATTATTTTACTGC 58.707 37.037 0.00 0.00 0.00 4.40
562 563 9.566432 AGGCCTCTCTATTGAATTATTTTACTG 57.434 33.333 0.00 0.00 0.00 2.74
563 564 9.785982 GAGGCCTCTCTATTGAATTATTTTACT 57.214 33.333 26.25 0.00 37.07 2.24
564 565 8.713271 CGAGGCCTCTCTATTGAATTATTTTAC 58.287 37.037 29.73 0.00 37.86 2.01
565 566 8.647796 TCGAGGCCTCTCTATTGAATTATTTTA 58.352 33.333 29.73 0.00 37.86 1.52
600 601 7.336931 CGTTTTTATATTATGGGATGGAGGGAG 59.663 40.741 0.00 0.00 0.00 4.30
601 602 7.172342 CGTTTTTATATTATGGGATGGAGGGA 58.828 38.462 0.00 0.00 0.00 4.20
602 603 6.377146 CCGTTTTTATATTATGGGATGGAGGG 59.623 42.308 0.00 0.00 0.00 4.30
603 604 6.946009 ACCGTTTTTATATTATGGGATGGAGG 59.054 38.462 0.00 0.00 0.00 4.30
604 605 7.996098 ACCGTTTTTATATTATGGGATGGAG 57.004 36.000 0.00 0.00 0.00 3.86
605 606 8.770010 AAACCGTTTTTATATTATGGGATGGA 57.230 30.769 0.00 0.00 0.00 3.41
606 607 9.825109 AAAAACCGTTTTTATATTATGGGATGG 57.175 29.630 18.32 0.00 40.80 3.51
652 653 9.877178 CTCCGTCCTATAATATAAGAGCATTTT 57.123 33.333 0.00 0.00 0.00 1.82
653 654 8.478877 CCTCCGTCCTATAATATAAGAGCATTT 58.521 37.037 0.00 0.00 0.00 2.32
654 655 7.070074 CCCTCCGTCCTATAATATAAGAGCATT 59.930 40.741 0.00 0.00 0.00 3.56
655 656 6.551601 CCCTCCGTCCTATAATATAAGAGCAT 59.448 42.308 0.00 0.00 0.00 3.79
656 657 5.892119 CCCTCCGTCCTATAATATAAGAGCA 59.108 44.000 0.00 0.00 0.00 4.26
657 658 6.127793 TCCCTCCGTCCTATAATATAAGAGC 58.872 44.000 0.00 0.00 0.00 4.09
658 659 7.348033 ACTCCCTCCGTCCTATAATATAAGAG 58.652 42.308 0.00 0.00 0.00 2.85
659 660 7.281366 ACTCCCTCCGTCCTATAATATAAGA 57.719 40.000 0.00 0.00 0.00 2.10
660 661 9.471702 TTTACTCCCTCCGTCCTATAATATAAG 57.528 37.037 0.00 0.00 0.00 1.73
663 664 8.912614 AATTTACTCCCTCCGTCCTATAATAT 57.087 34.615 0.00 0.00 0.00 1.28
664 665 8.731591 AAATTTACTCCCTCCGTCCTATAATA 57.268 34.615 0.00 0.00 0.00 0.98
665 666 7.628501 AAATTTACTCCCTCCGTCCTATAAT 57.371 36.000 0.00 0.00 0.00 1.28
666 667 7.441903 AAAATTTACTCCCTCCGTCCTATAA 57.558 36.000 0.00 0.00 0.00 0.98
667 668 8.424133 GTTAAAATTTACTCCCTCCGTCCTATA 58.576 37.037 0.00 0.00 0.00 1.31
668 669 5.970501 AAAATTTACTCCCTCCGTCCTAT 57.029 39.130 0.00 0.00 0.00 2.57
669 670 6.213195 TGTTAAAATTTACTCCCTCCGTCCTA 59.787 38.462 0.00 0.00 0.00 2.94
670 671 5.013391 TGTTAAAATTTACTCCCTCCGTCCT 59.987 40.000 0.00 0.00 0.00 3.85
671 672 5.247862 TGTTAAAATTTACTCCCTCCGTCC 58.752 41.667 0.00 0.00 0.00 4.79
672 673 6.168389 TCTGTTAAAATTTACTCCCTCCGTC 58.832 40.000 0.00 0.00 0.00 4.79
673 674 6.117975 TCTGTTAAAATTTACTCCCTCCGT 57.882 37.500 0.00 0.00 0.00 4.69
674 675 7.443259 TTTCTGTTAAAATTTACTCCCTCCG 57.557 36.000 0.00 0.00 0.00 4.63
677 678 9.816787 TGGTATTTCTGTTAAAATTTACTCCCT 57.183 29.630 0.00 0.00 31.50 4.20
731 732 6.205464 TGGTTTCTGAGATGATTTTCACTGTC 59.795 38.462 0.00 0.00 0.00 3.51
896 904 0.672711 GGGATAAATACGGCTCGGCC 60.673 60.000 4.96 4.96 46.75 6.13
992 1005 2.809174 GCCGCGCCATGGTTTTTC 60.809 61.111 14.67 0.00 0.00 2.29
1267 1303 0.952984 AAAGAGAGCTTCACTGGCGC 60.953 55.000 0.00 0.00 31.82 6.53
1268 1304 1.196354 CAAAAGAGAGCTTCACTGGCG 59.804 52.381 0.00 0.00 31.82 5.69
1349 1390 0.248289 CTTGAAAAGCCTGGCCCATG 59.752 55.000 16.57 7.18 36.98 3.66
1746 1787 2.886862 AGAGCATCCAGATCTCGTTG 57.113 50.000 0.00 0.00 39.11 4.10
1755 1796 0.247460 TGGTGTCGAAGAGCATCCAG 59.753 55.000 0.00 0.00 36.95 3.86
1805 1865 6.975197 ACACTCATATACGAGTTCACTGATTG 59.025 38.462 0.00 0.00 43.84 2.67
1851 1916 3.135167 ACCACCATTATTCGTCCGGTTAT 59.865 43.478 0.00 0.00 0.00 1.89
1855 1920 1.295792 CACCACCATTATTCGTCCGG 58.704 55.000 0.00 0.00 0.00 5.14
1857 1922 1.021968 GGCACCACCATTATTCGTCC 58.978 55.000 0.00 0.00 38.86 4.79
1871 1936 4.495844 CGCTTAAGCAGTTTATAAGGCACC 60.496 45.833 26.29 0.00 42.21 5.01
1873 1938 4.509616 TCGCTTAAGCAGTTTATAAGGCA 58.490 39.130 26.29 0.00 42.21 4.75
1875 1940 8.827677 ACTATTTCGCTTAAGCAGTTTATAAGG 58.172 33.333 26.29 6.78 42.21 2.69
1876 1941 9.638300 CACTATTTCGCTTAAGCAGTTTATAAG 57.362 33.333 26.29 14.21 42.21 1.73
1877 1942 9.373603 TCACTATTTCGCTTAAGCAGTTTATAA 57.626 29.630 26.29 9.59 42.21 0.98
1889 1954 6.140110 GCAAAACAGTTCACTATTTCGCTTA 58.860 36.000 0.00 0.00 0.00 3.09
1894 1959 4.379793 CAGCGCAAAACAGTTCACTATTTC 59.620 41.667 11.47 0.00 0.00 2.17
1897 1962 2.878406 ACAGCGCAAAACAGTTCACTAT 59.122 40.909 11.47 0.00 0.00 2.12
1900 1965 2.748461 TACAGCGCAAAACAGTTCAC 57.252 45.000 11.47 0.00 0.00 3.18
1902 1967 2.225491 TCCATACAGCGCAAAACAGTTC 59.775 45.455 11.47 0.00 0.00 3.01
1903 1968 2.031157 GTCCATACAGCGCAAAACAGTT 60.031 45.455 11.47 0.00 0.00 3.16
1925 1996 1.468520 GAGGCACTTTATTGCTCGCAA 59.531 47.619 6.80 6.80 41.55 4.85
1970 2042 2.642996 AAGCAACAGGCCGCCAAAAC 62.643 55.000 13.15 0.00 46.50 2.43
2064 2189 5.546526 GACTCCTCTGTTTGATTCTTCAGT 58.453 41.667 0.00 0.00 32.27 3.41
2079 2204 0.406361 AACCTGGACTCGACTCCTCT 59.594 55.000 11.73 0.00 0.00 3.69
2084 2209 1.619332 GGAAGAAACCTGGACTCGACT 59.381 52.381 0.00 0.00 0.00 4.18
2088 2213 1.343465 TGACGGAAGAAACCTGGACTC 59.657 52.381 0.00 0.00 0.00 3.36
2089 2214 1.070289 GTGACGGAAGAAACCTGGACT 59.930 52.381 0.00 0.00 0.00 3.85
2090 2215 1.509703 GTGACGGAAGAAACCTGGAC 58.490 55.000 0.00 0.00 0.00 4.02
2091 2216 0.395312 GGTGACGGAAGAAACCTGGA 59.605 55.000 0.00 0.00 37.22 3.86
2092 2217 0.396811 AGGTGACGGAAGAAACCTGG 59.603 55.000 0.00 0.00 44.61 4.45
2095 2220 2.249844 TTGAGGTGACGGAAGAAACC 57.750 50.000 0.00 0.00 39.37 3.27
2109 2235 3.815401 AGAATCACCGTTTCTGTTTGAGG 59.185 43.478 0.00 0.00 32.30 3.86
2139 2265 0.108898 CCAAGAGAGAGTGCAGTCGG 60.109 60.000 15.76 6.23 0.00 4.79
2150 2281 1.406898 TGTAGCGATGCTCCAAGAGAG 59.593 52.381 0.00 0.00 46.29 3.20
2165 2296 2.841442 AGACACTCCCTGTTTGTAGC 57.159 50.000 0.00 0.00 31.03 3.58
2168 2299 2.037144 ACGTAGACACTCCCTGTTTGT 58.963 47.619 0.00 0.00 31.03 2.83
2169 2300 2.404215 CACGTAGACACTCCCTGTTTG 58.596 52.381 0.00 0.00 31.03 2.93
2170 2301 1.270147 GCACGTAGACACTCCCTGTTT 60.270 52.381 0.00 0.00 31.03 2.83
2173 2307 1.132643 GTAGCACGTAGACACTCCCTG 59.867 57.143 0.00 0.00 0.00 4.45
2183 2317 0.376152 ACGTCGATGGTAGCACGTAG 59.624 55.000 9.90 8.73 43.42 3.51
2196 2334 6.917477 ACAAAATGTTTAGTACTGTACGTCGA 59.083 34.615 11.97 0.00 0.00 4.20
2203 2341 4.555906 GCGCCACAAAATGTTTAGTACTGT 60.556 41.667 5.39 0.00 0.00 3.55
2204 2342 3.911964 GCGCCACAAAATGTTTAGTACTG 59.088 43.478 5.39 0.00 0.00 2.74
2205 2343 3.566322 TGCGCCACAAAATGTTTAGTACT 59.434 39.130 4.18 0.00 0.00 2.73
2207 2345 4.216472 TCATGCGCCACAAAATGTTTAGTA 59.784 37.500 4.18 0.00 0.00 1.82
2208 2346 3.005261 TCATGCGCCACAAAATGTTTAGT 59.995 39.130 4.18 0.00 0.00 2.24
2209 2347 3.573598 TCATGCGCCACAAAATGTTTAG 58.426 40.909 4.18 0.00 0.00 1.85
2212 2350 1.612950 TCTCATGCGCCACAAAATGTT 59.387 42.857 4.18 0.00 0.00 2.71
2214 2352 2.350899 TTCTCATGCGCCACAAAATG 57.649 45.000 4.18 0.00 0.00 2.32
2215 2353 2.676076 GTTTCTCATGCGCCACAAAAT 58.324 42.857 4.18 0.00 0.00 1.82
2216 2354 1.599171 CGTTTCTCATGCGCCACAAAA 60.599 47.619 4.18 0.00 0.00 2.44
2217 2355 0.040514 CGTTTCTCATGCGCCACAAA 60.041 50.000 4.18 0.00 0.00 2.83
2218 2356 0.882484 TCGTTTCTCATGCGCCACAA 60.882 50.000 4.18 0.00 0.00 3.33
2220 2358 1.286501 TATCGTTTCTCATGCGCCAC 58.713 50.000 4.18 0.00 0.00 5.01
2221 2359 2.017138 TTATCGTTTCTCATGCGCCA 57.983 45.000 4.18 0.00 0.00 5.69
2222 2360 3.609103 ATTTATCGTTTCTCATGCGCC 57.391 42.857 4.18 0.00 0.00 6.53
2223 2361 4.144555 GCTATTTATCGTTTCTCATGCGC 58.855 43.478 0.00 0.00 0.00 6.09
2224 2362 4.664139 CGGCTATTTATCGTTTCTCATGCG 60.664 45.833 0.00 0.00 0.00 4.73
2225 2363 4.377431 CCGGCTATTTATCGTTTCTCATGC 60.377 45.833 0.00 0.00 0.00 4.06
2229 2367 3.128349 TGCCGGCTATTTATCGTTTCTC 58.872 45.455 29.70 0.00 0.00 2.87
2230 2368 3.131396 CTGCCGGCTATTTATCGTTTCT 58.869 45.455 29.70 0.00 0.00 2.52
2231 2369 2.349532 GCTGCCGGCTATTTATCGTTTC 60.350 50.000 29.70 0.00 38.06 2.78
2233 2371 1.226746 GCTGCCGGCTATTTATCGTT 58.773 50.000 29.70 0.00 38.06 3.85
2234 2372 2.914379 GCTGCCGGCTATTTATCGT 58.086 52.632 29.70 0.00 38.06 3.73
2244 2382 0.179153 GAGAAAAATGAGCTGCCGGC 60.179 55.000 22.73 22.73 42.19 6.13
2245 2383 1.399791 GAGAGAAAAATGAGCTGCCGG 59.600 52.381 0.00 0.00 0.00 6.13
2297 2454 1.370051 GAAAAACGACCTGCCGTGC 60.370 57.895 0.00 0.00 42.54 5.34
2298 2455 0.234884 GAGAAAAACGACCTGCCGTG 59.765 55.000 0.00 0.00 42.54 4.94
2299 2456 0.106149 AGAGAAAAACGACCTGCCGT 59.894 50.000 0.00 0.00 45.64 5.68
2300 2457 0.790814 GAGAGAAAAACGACCTGCCG 59.209 55.000 0.00 0.00 0.00 5.69
2301 2458 1.157585 GGAGAGAAAAACGACCTGCC 58.842 55.000 0.00 0.00 0.00 4.85
2302 2459 0.790814 CGGAGAGAAAAACGACCTGC 59.209 55.000 0.00 0.00 0.00 4.85
2666 2847 0.685097 GGGGAGTGAGTACTTGTGCA 59.315 55.000 0.00 0.00 37.25 4.57
2757 2938 4.765339 TGATCGGATTCTATAGAAAGCGGA 59.235 41.667 18.79 20.05 37.61 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.