Multiple sequence alignment - TraesCS3D01G134300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)



BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G134300 chr3D 100.000 2339 0 0 1 2339 93478373 93476035 0.000000e+00 4320
1 TraesCS3D01G134300 chr3D 91.618 859 65 4 500 1357 300565982 300566834 0.000000e+00 1181
2 TraesCS3D01G134300 chr3D 96.241 133 4 1 1 133 58597515 58597646 1.410000e-52 217
3 TraesCS3D01G134300 chr6D 93.287 864 52 4 501 1360 32688502 32687641 0.000000e+00 1269
4 TraesCS3D01G134300 chr6D 92.601 865 59 4 501 1363 48682972 48682111 0.000000e+00 1238
5 TraesCS3D01G134300 chr6D 94.828 290 15 0 215 504 100351941 100351652 9.850000e-124 453
6 TraesCS3D01G134300 chr6D 96.063 127 5 0 1 127 78252491 78252365 8.470000e-50 207
7 TraesCS3D01G134300 chr5A 92.816 863 58 4 500 1360 592306378 592305518 0.000000e+00 1247
8 TraesCS3D01G134300 chr5A 96.825 126 3 1 1 126 705285377 705285253 2.360000e-50 209
9 TraesCS3D01G134300 chr3B 92.477 864 54 9 501 1361 1790288 1789433 0.000000e+00 1225
10 TraesCS3D01G134300 chr3B 86.364 770 87 12 1360 2120 142725165 142725925 0.000000e+00 824
11 TraesCS3D01G134300 chr7B 91.935 868 68 2 501 1366 651392384 651391517 0.000000e+00 1214
12 TraesCS3D01G134300 chr7B 96.466 283 10 0 219 501 579784606 579784324 3.520000e-128 468
13 TraesCS3D01G134300 chr2D 92.005 863 66 3 501 1362 574398212 574397352 0.000000e+00 1208
14 TraesCS3D01G134300 chr2D 95.455 286 13 0 218 503 332510414 332510129 7.620000e-125 457
15 TraesCS3D01G134300 chr2D 96.774 124 3 1 3 126 492033798 492033920 3.050000e-49 206
16 TraesCS3D01G134300 chr7D 91.795 841 66 3 501 1340 439710137 439709299 0.000000e+00 1168
17 TraesCS3D01G134300 chr7D 97.619 126 2 1 1 126 580887549 580887673 5.060000e-52 215
18 TraesCS3D01G134300 chr7D 94.891 137 5 2 1 137 505593234 505593100 1.820000e-51 213
19 TraesCS3D01G134300 chr3A 90.751 865 75 5 501 1361 211952196 211953059 0.000000e+00 1149
20 TraesCS3D01G134300 chr5B 97.849 279 6 0 219 497 153901374 153901652 1.260000e-132 483
21 TraesCS3D01G134300 chr1B 95.960 297 10 2 210 504 549747702 549747998 4.520000e-132 481
22 TraesCS3D01G134300 chr1D 95.819 287 12 0 218 504 1358230 1357944 4.550000e-127 464
23 TraesCS3D01G134300 chr1D 95.804 286 10 2 218 503 9643672 9643955 5.890000e-126 460
24 TraesCS3D01G134300 chr1D 95.470 287 13 0 217 503 349468689 349468403 2.120000e-125 459
25 TraesCS3D01G134300 chr4B 95.139 288 14 0 217 504 90895570 90895857 2.740000e-124 455
26 TraesCS3D01G134300 chr2A 97.619 126 2 1 1 126 98897544 98897420 5.060000e-52 215
27 TraesCS3D01G134300 chr4A 96.825 126 3 1 1 126 6819302 6819426 2.360000e-50 209
28 TraesCS3D01G134300 chr7A 93.985 133 7 1 1 133 642938022 642938153 1.420000e-47 200


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G134300 chr3D 93476035 93478373 2338 True 4320 4320 100.000 1 2339 1 chr3D.!!$R1 2338
1 TraesCS3D01G134300 chr3D 300565982 300566834 852 False 1181 1181 91.618 500 1357 1 chr3D.!!$F2 857
2 TraesCS3D01G134300 chr6D 32687641 32688502 861 True 1269 1269 93.287 501 1360 1 chr6D.!!$R1 859
3 TraesCS3D01G134300 chr6D 48682111 48682972 861 True 1238 1238 92.601 501 1363 1 chr6D.!!$R2 862
4 TraesCS3D01G134300 chr5A 592305518 592306378 860 True 1247 1247 92.816 500 1360 1 chr5A.!!$R1 860
5 TraesCS3D01G134300 chr3B 1789433 1790288 855 True 1225 1225 92.477 501 1361 1 chr3B.!!$R1 860
6 TraesCS3D01G134300 chr3B 142725165 142725925 760 False 824 824 86.364 1360 2120 1 chr3B.!!$F1 760
7 TraesCS3D01G134300 chr7B 651391517 651392384 867 True 1214 1214 91.935 501 1366 1 chr7B.!!$R2 865
8 TraesCS3D01G134300 chr2D 574397352 574398212 860 True 1208 1208 92.005 501 1362 1 chr2D.!!$R2 861
9 TraesCS3D01G134300 chr7D 439709299 439710137 838 True 1168 1168 91.795 501 1340 1 chr7D.!!$R1 839
10 TraesCS3D01G134300 chr3A 211952196 211953059 863 False 1149 1149 90.751 501 1361 1 chr3A.!!$F1 860


AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
231 232 0.178944 GGGTTTAGGCCCTGTTTGGT 60.179 55.0 0.0 0.0 45.22 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1877 1901 0.037232 AAGGCTTTCGGGAAGTCGAG 60.037 55.0 0.0 0.0 44.78 4.04 R


All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.642755 CGGCTCGCTTCAGTGTTT 58.357 55.556 0.00 0.00 0.00 2.83
18 19 1.205064 CGGCTCGCTTCAGTGTTTG 59.795 57.895 0.00 0.00 0.00 2.93
19 20 1.498865 CGGCTCGCTTCAGTGTTTGT 61.499 55.000 0.00 0.00 0.00 2.83
20 21 1.508632 GGCTCGCTTCAGTGTTTGTA 58.491 50.000 0.00 0.00 0.00 2.41
21 22 1.461127 GGCTCGCTTCAGTGTTTGTAG 59.539 52.381 0.00 0.00 0.00 2.74
22 23 2.135933 GCTCGCTTCAGTGTTTGTAGT 58.864 47.619 0.00 0.00 0.00 2.73
23 24 2.155924 GCTCGCTTCAGTGTTTGTAGTC 59.844 50.000 0.00 0.00 0.00 2.59
24 25 2.390938 TCGCTTCAGTGTTTGTAGTCG 58.609 47.619 0.00 0.00 0.00 4.18
25 26 2.124903 CGCTTCAGTGTTTGTAGTCGT 58.875 47.619 0.00 0.00 0.00 4.34
26 27 2.153247 CGCTTCAGTGTTTGTAGTCGTC 59.847 50.000 0.00 0.00 0.00 4.20
27 28 2.153247 GCTTCAGTGTTTGTAGTCGTCG 59.847 50.000 0.00 0.00 0.00 5.12
28 29 1.762419 TCAGTGTTTGTAGTCGTCGC 58.238 50.000 0.00 0.00 0.00 5.19
29 30 1.335810 TCAGTGTTTGTAGTCGTCGCT 59.664 47.619 0.00 0.00 0.00 4.93
30 31 2.549329 TCAGTGTTTGTAGTCGTCGCTA 59.451 45.455 0.00 0.00 0.00 4.26
31 32 2.909244 CAGTGTTTGTAGTCGTCGCTAG 59.091 50.000 0.00 0.00 0.00 3.42
32 33 2.095364 AGTGTTTGTAGTCGTCGCTAGG 60.095 50.000 0.00 0.00 0.00 3.02
33 34 1.881973 TGTTTGTAGTCGTCGCTAGGT 59.118 47.619 0.00 0.00 0.00 3.08
34 35 2.248487 GTTTGTAGTCGTCGCTAGGTG 58.752 52.381 0.00 0.00 0.00 4.00
35 36 0.806868 TTGTAGTCGTCGCTAGGTGG 59.193 55.000 0.00 0.00 0.00 4.61
36 37 0.321919 TGTAGTCGTCGCTAGGTGGT 60.322 55.000 0.00 0.00 0.00 4.16
37 38 0.376502 GTAGTCGTCGCTAGGTGGTC 59.623 60.000 0.00 0.00 0.00 4.02
38 39 0.251354 TAGTCGTCGCTAGGTGGTCT 59.749 55.000 0.00 0.00 0.00 3.85
39 40 0.251354 AGTCGTCGCTAGGTGGTCTA 59.749 55.000 0.00 0.00 0.00 2.59
40 41 0.376502 GTCGTCGCTAGGTGGTCTAC 59.623 60.000 0.00 0.00 0.00 2.59
41 42 1.086067 TCGTCGCTAGGTGGTCTACG 61.086 60.000 0.00 0.00 0.00 3.51
42 43 1.726265 GTCGCTAGGTGGTCTACGG 59.274 63.158 0.00 0.00 0.00 4.02
43 44 0.745845 GTCGCTAGGTGGTCTACGGA 60.746 60.000 0.00 0.00 0.00 4.69
44 45 0.182061 TCGCTAGGTGGTCTACGGAT 59.818 55.000 0.00 0.00 0.00 4.18
45 46 0.592148 CGCTAGGTGGTCTACGGATC 59.408 60.000 0.00 0.00 0.00 3.36
46 47 1.814634 CGCTAGGTGGTCTACGGATCT 60.815 57.143 0.00 0.00 0.00 2.75
47 48 1.609555 GCTAGGTGGTCTACGGATCTG 59.390 57.143 0.00 0.00 0.00 2.90
48 49 2.231529 CTAGGTGGTCTACGGATCTGG 58.768 57.143 6.47 0.00 0.00 3.86
49 50 0.629596 AGGTGGTCTACGGATCTGGA 59.370 55.000 6.47 0.00 0.00 3.86
50 51 1.218196 AGGTGGTCTACGGATCTGGAT 59.782 52.381 6.47 0.00 0.00 3.41
51 52 1.341531 GGTGGTCTACGGATCTGGATG 59.658 57.143 6.47 0.00 0.00 3.51
52 53 2.032620 GTGGTCTACGGATCTGGATGT 58.967 52.381 6.47 0.00 0.00 3.06
53 54 3.220110 GTGGTCTACGGATCTGGATGTA 58.780 50.000 6.47 0.00 0.00 2.29
54 55 3.635373 GTGGTCTACGGATCTGGATGTAA 59.365 47.826 6.47 0.00 0.00 2.41
55 56 4.281182 GTGGTCTACGGATCTGGATGTAAT 59.719 45.833 6.47 0.00 0.00 1.89
56 57 4.899457 TGGTCTACGGATCTGGATGTAATT 59.101 41.667 6.47 0.00 0.00 1.40
57 58 5.365605 TGGTCTACGGATCTGGATGTAATTT 59.634 40.000 6.47 0.00 0.00 1.82
58 59 6.126883 TGGTCTACGGATCTGGATGTAATTTT 60.127 38.462 6.47 0.00 0.00 1.82
59 60 6.766467 GGTCTACGGATCTGGATGTAATTTTT 59.234 38.462 6.47 0.00 0.00 1.94
60 61 7.929785 GGTCTACGGATCTGGATGTAATTTTTA 59.070 37.037 6.47 0.00 0.00 1.52
61 62 9.490379 GTCTACGGATCTGGATGTAATTTTTAT 57.510 33.333 6.47 0.00 0.00 1.40
89 90 8.683550 TTTCTAGTGTTCGTTGTACTATCATG 57.316 34.615 0.00 0.00 0.00 3.07
90 91 7.619964 TCTAGTGTTCGTTGTACTATCATGA 57.380 36.000 0.00 0.00 0.00 3.07
91 92 8.221965 TCTAGTGTTCGTTGTACTATCATGAT 57.778 34.615 13.81 13.81 0.00 2.45
92 93 8.683615 TCTAGTGTTCGTTGTACTATCATGATT 58.316 33.333 14.65 0.00 0.00 2.57
93 94 7.525688 AGTGTTCGTTGTACTATCATGATTG 57.474 36.000 14.65 14.58 0.00 2.67
94 95 7.320399 AGTGTTCGTTGTACTATCATGATTGA 58.680 34.615 21.64 1.13 36.00 2.57
95 96 7.817478 AGTGTTCGTTGTACTATCATGATTGAA 59.183 33.333 21.64 5.14 34.96 2.69
96 97 8.110612 GTGTTCGTTGTACTATCATGATTGAAG 58.889 37.037 21.64 12.40 34.96 3.02
97 98 8.032451 TGTTCGTTGTACTATCATGATTGAAGA 58.968 33.333 21.64 6.21 34.96 2.87
98 99 9.035607 GTTCGTTGTACTATCATGATTGAAGAT 57.964 33.333 21.64 4.07 34.96 2.40
99 100 8.579682 TCGTTGTACTATCATGATTGAAGATG 57.420 34.615 21.64 10.62 34.96 2.90
100 101 8.413229 TCGTTGTACTATCATGATTGAAGATGA 58.587 33.333 21.64 12.27 34.96 2.92
101 102 9.034544 CGTTGTACTATCATGATTGAAGATGAA 57.965 33.333 21.64 4.00 34.96 2.57
151 152 5.728351 TTTTGTCTTATGGCGTATGCTAC 57.272 39.130 6.92 0.00 42.25 3.58
152 153 4.394439 TTGTCTTATGGCGTATGCTACA 57.606 40.909 6.92 0.00 42.25 2.74
153 154 4.600692 TGTCTTATGGCGTATGCTACAT 57.399 40.909 6.92 5.46 42.25 2.29
154 155 5.715434 TGTCTTATGGCGTATGCTACATA 57.285 39.130 6.92 4.47 42.25 2.29
155 156 5.709966 TGTCTTATGGCGTATGCTACATAG 58.290 41.667 6.92 0.00 42.25 2.23
156 157 5.243060 TGTCTTATGGCGTATGCTACATAGT 59.757 40.000 6.92 0.00 42.25 2.12
157 158 6.431852 TGTCTTATGGCGTATGCTACATAGTA 59.568 38.462 6.92 0.00 42.25 1.82
158 159 6.746364 GTCTTATGGCGTATGCTACATAGTAC 59.254 42.308 6.92 5.81 42.25 2.73
159 160 6.431852 TCTTATGGCGTATGCTACATAGTACA 59.568 38.462 6.92 0.00 42.25 2.90
160 161 4.922471 TGGCGTATGCTACATAGTACAA 57.078 40.909 6.92 0.00 42.25 2.41
161 162 5.462530 TGGCGTATGCTACATAGTACAAT 57.537 39.130 6.92 0.00 42.25 2.71
162 163 5.466819 TGGCGTATGCTACATAGTACAATC 58.533 41.667 6.92 0.00 42.25 2.67
163 164 4.863131 GGCGTATGCTACATAGTACAATCC 59.137 45.833 6.92 0.00 42.25 3.01
164 165 4.863131 GCGTATGCTACATAGTACAATCCC 59.137 45.833 0.00 0.00 38.39 3.85
165 166 5.566032 GCGTATGCTACATAGTACAATCCCA 60.566 44.000 0.00 0.00 38.39 4.37
166 167 6.631016 CGTATGCTACATAGTACAATCCCAT 58.369 40.000 0.00 0.00 0.00 4.00
167 168 6.531594 CGTATGCTACATAGTACAATCCCATG 59.468 42.308 0.00 0.00 0.00 3.66
168 169 4.641396 TGCTACATAGTACAATCCCATGC 58.359 43.478 0.00 0.00 0.00 4.06
169 170 4.003648 GCTACATAGTACAATCCCATGCC 58.996 47.826 0.00 0.00 0.00 4.40
170 171 3.126001 ACATAGTACAATCCCATGCCG 57.874 47.619 0.00 0.00 0.00 5.69
171 172 2.703536 ACATAGTACAATCCCATGCCGA 59.296 45.455 0.00 0.00 0.00 5.54
172 173 3.244215 ACATAGTACAATCCCATGCCGAG 60.244 47.826 0.00 0.00 0.00 4.63
173 174 1.204146 AGTACAATCCCATGCCGAGT 58.796 50.000 0.00 0.00 0.00 4.18
174 175 1.559682 AGTACAATCCCATGCCGAGTT 59.440 47.619 0.00 0.00 0.00 3.01
175 176 2.769663 AGTACAATCCCATGCCGAGTTA 59.230 45.455 0.00 0.00 0.00 2.24
176 177 2.038387 ACAATCCCATGCCGAGTTAC 57.962 50.000 0.00 0.00 0.00 2.50
177 178 0.937304 CAATCCCATGCCGAGTTACG 59.063 55.000 0.00 0.00 42.18 3.18
178 179 0.814010 AATCCCATGCCGAGTTACGC 60.814 55.000 0.00 0.00 41.07 4.42
179 180 2.971428 ATCCCATGCCGAGTTACGCG 62.971 60.000 3.53 3.53 41.07 6.01
180 181 2.202690 CCATGCCGAGTTACGCGA 60.203 61.111 15.93 0.00 41.07 5.87
181 182 1.807981 CCATGCCGAGTTACGCGAA 60.808 57.895 15.93 0.00 41.07 4.70
182 183 1.631072 CATGCCGAGTTACGCGAAG 59.369 57.895 15.93 0.00 41.07 3.79
183 184 1.518572 ATGCCGAGTTACGCGAAGG 60.519 57.895 15.93 7.51 41.07 3.46
184 185 2.126189 GCCGAGTTACGCGAAGGT 60.126 61.111 15.93 0.00 41.07 3.50
185 186 1.735559 GCCGAGTTACGCGAAGGTT 60.736 57.895 15.93 0.00 41.07 3.50
186 187 1.287041 GCCGAGTTACGCGAAGGTTT 61.287 55.000 15.93 0.00 41.07 3.27
187 188 0.712222 CCGAGTTACGCGAAGGTTTC 59.288 55.000 15.93 1.39 41.07 2.78
188 189 1.411394 CGAGTTACGCGAAGGTTTCA 58.589 50.000 15.93 0.00 34.51 2.69
189 190 1.123756 CGAGTTACGCGAAGGTTTCAC 59.876 52.381 15.93 0.00 34.51 3.18
190 191 1.458445 GAGTTACGCGAAGGTTTCACC 59.542 52.381 15.93 0.00 38.99 4.02
192 193 6.895213 CGAGTTACGCGAAGGTTTCACCTA 62.895 50.000 15.93 0.00 40.96 3.08
200 201 3.496675 GGTTTCACCTATCTGCCCC 57.503 57.895 0.00 0.00 34.73 5.80
201 202 0.623723 GGTTTCACCTATCTGCCCCA 59.376 55.000 0.00 0.00 34.73 4.96
202 203 1.682087 GGTTTCACCTATCTGCCCCAC 60.682 57.143 0.00 0.00 34.73 4.61
203 204 1.282157 GTTTCACCTATCTGCCCCACT 59.718 52.381 0.00 0.00 0.00 4.00
204 205 1.668826 TTCACCTATCTGCCCCACTT 58.331 50.000 0.00 0.00 0.00 3.16
205 206 0.911769 TCACCTATCTGCCCCACTTG 59.088 55.000 0.00 0.00 0.00 3.16
206 207 0.749454 CACCTATCTGCCCCACTTGC 60.749 60.000 0.00 0.00 0.00 4.01
207 208 0.916358 ACCTATCTGCCCCACTTGCT 60.916 55.000 0.00 0.00 0.00 3.91
208 209 0.179034 CCTATCTGCCCCACTTGCTC 60.179 60.000 0.00 0.00 0.00 4.26
209 210 0.531532 CTATCTGCCCCACTTGCTCG 60.532 60.000 0.00 0.00 0.00 5.03
210 211 1.971505 TATCTGCCCCACTTGCTCGG 61.972 60.000 0.00 0.00 0.00 4.63
211 212 4.020617 CTGCCCCACTTGCTCGGA 62.021 66.667 0.00 0.00 0.00 4.55
212 213 3.965539 CTGCCCCACTTGCTCGGAG 62.966 68.421 0.00 0.00 0.00 4.63
213 214 4.785453 GCCCCACTTGCTCGGAGG 62.785 72.222 7.20 0.00 0.00 4.30
214 215 4.101448 CCCCACTTGCTCGGAGGG 62.101 72.222 7.20 0.00 39.29 4.30
215 216 3.322466 CCCACTTGCTCGGAGGGT 61.322 66.667 7.20 0.00 34.75 4.34
216 217 2.750350 CCACTTGCTCGGAGGGTT 59.250 61.111 7.20 0.00 0.00 4.11
217 218 1.073199 CCACTTGCTCGGAGGGTTT 59.927 57.895 7.20 0.00 0.00 3.27
218 219 0.323629 CCACTTGCTCGGAGGGTTTA 59.676 55.000 7.20 0.00 0.00 2.01
219 220 1.676014 CCACTTGCTCGGAGGGTTTAG 60.676 57.143 7.20 0.00 0.00 1.85
220 221 0.613777 ACTTGCTCGGAGGGTTTAGG 59.386 55.000 7.20 0.00 0.00 2.69
221 222 0.744771 CTTGCTCGGAGGGTTTAGGC 60.745 60.000 7.20 0.00 0.00 3.93
222 223 2.189784 GCTCGGAGGGTTTAGGCC 59.810 66.667 7.20 0.00 0.00 5.19
230 231 2.666085 GGGTTTAGGCCCTGTTTGG 58.334 57.895 0.00 0.00 45.22 3.28
231 232 0.178944 GGGTTTAGGCCCTGTTTGGT 60.179 55.000 0.00 0.00 45.22 3.67
232 233 1.712056 GGTTTAGGCCCTGTTTGGTT 58.288 50.000 0.00 0.00 0.00 3.67
233 234 1.616865 GGTTTAGGCCCTGTTTGGTTC 59.383 52.381 0.00 0.00 0.00 3.62
234 235 2.312390 GTTTAGGCCCTGTTTGGTTCA 58.688 47.619 0.00 0.00 0.00 3.18
235 236 2.897326 GTTTAGGCCCTGTTTGGTTCAT 59.103 45.455 0.00 0.00 0.00 2.57
236 237 4.083565 GTTTAGGCCCTGTTTGGTTCATA 58.916 43.478 0.00 0.00 0.00 2.15
237 238 2.990740 AGGCCCTGTTTGGTTCATAA 57.009 45.000 0.00 0.00 0.00 1.90
238 239 2.807676 AGGCCCTGTTTGGTTCATAAG 58.192 47.619 0.00 0.00 0.00 1.73
239 240 2.110011 AGGCCCTGTTTGGTTCATAAGT 59.890 45.455 0.00 0.00 0.00 2.24
240 241 2.492088 GGCCCTGTTTGGTTCATAAGTC 59.508 50.000 0.00 0.00 0.00 3.01
241 242 2.492088 GCCCTGTTTGGTTCATAAGTCC 59.508 50.000 0.00 0.00 0.00 3.85
242 243 3.814316 GCCCTGTTTGGTTCATAAGTCCT 60.814 47.826 0.00 0.00 0.00 3.85
243 244 3.758554 CCCTGTTTGGTTCATAAGTCCTG 59.241 47.826 0.00 0.00 0.00 3.86
244 245 3.758554 CCTGTTTGGTTCATAAGTCCTGG 59.241 47.826 0.00 0.00 0.00 4.45
245 246 3.758554 CTGTTTGGTTCATAAGTCCTGGG 59.241 47.826 0.00 0.00 0.00 4.45
246 247 3.396276 TGTTTGGTTCATAAGTCCTGGGA 59.604 43.478 0.00 0.00 0.00 4.37
247 248 3.713826 TTGGTTCATAAGTCCTGGGAC 57.286 47.619 11.49 11.49 44.86 4.46
275 276 6.956102 TTTAGTCCCAACTTATAAGTCCCA 57.044 37.500 18.28 1.06 38.57 4.37
276 277 6.956102 TTAGTCCCAACTTATAAGTCCCAA 57.044 37.500 18.28 3.05 38.57 4.12
277 278 5.437191 AGTCCCAACTTATAAGTCCCAAG 57.563 43.478 18.28 6.66 38.57 3.61
278 279 4.850386 AGTCCCAACTTATAAGTCCCAAGT 59.150 41.667 18.28 5.74 38.57 3.16
279 280 5.045797 AGTCCCAACTTATAAGTCCCAAGTC 60.046 44.000 18.28 6.78 38.57 3.01
280 281 4.226620 TCCCAACTTATAAGTCCCAAGTCC 59.773 45.833 18.28 0.00 38.57 3.85
281 282 4.524053 CCAACTTATAAGTCCCAAGTCCC 58.476 47.826 18.28 0.00 38.57 4.46
282 283 4.227527 CCAACTTATAAGTCCCAAGTCCCT 59.772 45.833 18.28 0.00 38.57 4.20
283 284 5.427481 CCAACTTATAAGTCCCAAGTCCCTA 59.573 44.000 18.28 0.00 38.57 3.53
284 285 6.069847 CCAACTTATAAGTCCCAAGTCCCTAA 60.070 42.308 18.28 0.00 38.57 2.69
285 286 7.399634 CAACTTATAAGTCCCAAGTCCCTAAA 58.600 38.462 18.28 0.00 38.57 1.85
286 287 7.578458 ACTTATAAGTCCCAAGTCCCTAAAA 57.422 36.000 12.50 0.00 32.86 1.52
287 288 7.992295 ACTTATAAGTCCCAAGTCCCTAAAAA 58.008 34.615 12.50 0.00 32.86 1.94
288 289 8.107729 ACTTATAAGTCCCAAGTCCCTAAAAAG 58.892 37.037 12.50 0.00 32.86 2.27
289 290 4.808767 AAGTCCCAAGTCCCTAAAAAGT 57.191 40.909 0.00 0.00 0.00 2.66
290 291 4.368565 AGTCCCAAGTCCCTAAAAAGTC 57.631 45.455 0.00 0.00 0.00 3.01
291 292 3.074094 AGTCCCAAGTCCCTAAAAAGTCC 59.926 47.826 0.00 0.00 0.00 3.85
292 293 2.377531 TCCCAAGTCCCTAAAAAGTCCC 59.622 50.000 0.00 0.00 0.00 4.46
293 294 2.556782 CCCAAGTCCCTAAAAAGTCCCC 60.557 54.545 0.00 0.00 0.00 4.81
294 295 2.109304 CCAAGTCCCTAAAAAGTCCCCA 59.891 50.000 0.00 0.00 0.00 4.96
295 296 3.154710 CAAGTCCCTAAAAAGTCCCCAC 58.845 50.000 0.00 0.00 0.00 4.61
296 297 1.709115 AGTCCCTAAAAAGTCCCCACC 59.291 52.381 0.00 0.00 0.00 4.61
297 298 1.709115 GTCCCTAAAAAGTCCCCACCT 59.291 52.381 0.00 0.00 0.00 4.00
298 299 2.914941 GTCCCTAAAAAGTCCCCACCTA 59.085 50.000 0.00 0.00 0.00 3.08
299 300 3.526430 GTCCCTAAAAAGTCCCCACCTAT 59.474 47.826 0.00 0.00 0.00 2.57
300 301 4.017775 GTCCCTAAAAAGTCCCCACCTATT 60.018 45.833 0.00 0.00 0.00 1.73
301 302 4.608918 TCCCTAAAAAGTCCCCACCTATTT 59.391 41.667 0.00 0.00 0.00 1.40
302 303 4.709886 CCCTAAAAAGTCCCCACCTATTTG 59.290 45.833 0.00 0.00 0.00 2.32
303 304 4.709886 CCTAAAAAGTCCCCACCTATTTGG 59.290 45.833 0.00 0.00 42.93 3.28
315 316 3.739401 CCTATTTGGTTCCTGGGACTT 57.261 47.619 4.84 0.00 0.00 3.01
316 317 4.855298 CCTATTTGGTTCCTGGGACTTA 57.145 45.455 4.84 0.00 0.00 2.24
317 318 5.187621 CCTATTTGGTTCCTGGGACTTAA 57.812 43.478 4.84 0.16 0.00 1.85
318 319 4.948004 CCTATTTGGTTCCTGGGACTTAAC 59.052 45.833 4.84 0.00 0.00 2.01
319 320 3.955524 TTTGGTTCCTGGGACTTAACA 57.044 42.857 4.84 0.00 0.00 2.41
320 321 4.463050 TTTGGTTCCTGGGACTTAACAT 57.537 40.909 4.84 0.00 0.00 2.71
321 322 3.433306 TGGTTCCTGGGACTTAACATG 57.567 47.619 4.84 0.00 0.00 3.21
322 323 2.041081 TGGTTCCTGGGACTTAACATGG 59.959 50.000 4.84 0.00 0.00 3.66
323 324 2.307686 GGTTCCTGGGACTTAACATGGA 59.692 50.000 4.84 0.00 0.00 3.41
324 325 3.344515 GTTCCTGGGACTTAACATGGAC 58.655 50.000 0.00 0.00 0.00 4.02
325 326 1.913419 TCCTGGGACTTAACATGGACC 59.087 52.381 0.00 0.00 0.00 4.46
326 327 1.633432 CCTGGGACTTAACATGGACCA 59.367 52.381 0.00 0.00 0.00 4.02
327 328 2.041081 CCTGGGACTTAACATGGACCAA 59.959 50.000 0.00 0.00 0.00 3.67
328 329 3.499563 CCTGGGACTTAACATGGACCAAA 60.500 47.826 0.00 0.00 0.00 3.28
329 330 4.148838 CTGGGACTTAACATGGACCAAAA 58.851 43.478 0.00 0.00 0.00 2.44
330 331 4.148838 TGGGACTTAACATGGACCAAAAG 58.851 43.478 0.00 3.10 0.00 2.27
331 332 4.141135 TGGGACTTAACATGGACCAAAAGA 60.141 41.667 0.00 0.00 0.00 2.52
332 333 4.217767 GGGACTTAACATGGACCAAAAGAC 59.782 45.833 0.00 1.22 0.00 3.01
333 334 4.217767 GGACTTAACATGGACCAAAAGACC 59.782 45.833 0.00 6.63 0.00 3.85
334 335 4.798882 ACTTAACATGGACCAAAAGACCA 58.201 39.130 0.00 0.00 44.64 4.02
343 344 6.827586 TGGACCAAAAGACCATATTACAAC 57.172 37.500 0.00 0.00 35.22 3.32
344 345 6.548321 TGGACCAAAAGACCATATTACAACT 58.452 36.000 0.00 0.00 35.22 3.16
345 346 7.691213 TGGACCAAAAGACCATATTACAACTA 58.309 34.615 0.00 0.00 35.22 2.24
346 347 8.333235 TGGACCAAAAGACCATATTACAACTAT 58.667 33.333 0.00 0.00 35.22 2.12
347 348 9.841295 GGACCAAAAGACCATATTACAACTATA 57.159 33.333 0.00 0.00 0.00 1.31
354 355 9.448587 AAGACCATATTACAACTATAAGTCCCT 57.551 33.333 0.00 0.00 0.00 4.20
363 364 7.852550 ACAACTATAAGTCCCTATAAGTCCC 57.147 40.000 0.00 0.00 0.00 4.46
364 365 7.602868 ACAACTATAAGTCCCTATAAGTCCCT 58.397 38.462 0.00 0.00 0.00 4.20
365 366 7.729431 ACAACTATAAGTCCCTATAAGTCCCTC 59.271 40.741 0.00 0.00 0.00 4.30
366 367 6.803017 ACTATAAGTCCCTATAAGTCCCTCC 58.197 44.000 0.00 0.00 0.00 4.30
367 368 5.970692 ATAAGTCCCTATAAGTCCCTCCT 57.029 43.478 0.00 0.00 0.00 3.69
368 369 4.645968 AAGTCCCTATAAGTCCCTCCTT 57.354 45.455 0.00 0.00 0.00 3.36
369 370 3.930035 AGTCCCTATAAGTCCCTCCTTG 58.070 50.000 0.00 0.00 0.00 3.61
370 371 3.536434 AGTCCCTATAAGTCCCTCCTTGA 59.464 47.826 0.00 0.00 0.00 3.02
371 372 3.898741 GTCCCTATAAGTCCCTCCTTGAG 59.101 52.174 0.00 0.00 0.00 3.02
372 373 3.797845 TCCCTATAAGTCCCTCCTTGAGA 59.202 47.826 0.00 0.00 0.00 3.27
373 374 4.140900 TCCCTATAAGTCCCTCCTTGAGAG 60.141 50.000 0.00 0.00 42.83 3.20
374 375 4.388118 CCCTATAAGTCCCTCCTTGAGAGT 60.388 50.000 0.00 0.00 41.47 3.24
375 376 4.830600 CCTATAAGTCCCTCCTTGAGAGTC 59.169 50.000 0.00 0.00 41.47 3.36
376 377 4.618378 ATAAGTCCCTCCTTGAGAGTCT 57.382 45.455 0.00 0.00 41.47 3.24
377 378 3.268034 AAGTCCCTCCTTGAGAGTCTT 57.732 47.619 0.00 0.00 41.47 3.01
378 379 4.405756 AAGTCCCTCCTTGAGAGTCTTA 57.594 45.455 0.00 0.00 41.47 2.10
379 380 4.618378 AGTCCCTCCTTGAGAGTCTTAT 57.382 45.455 0.00 0.00 41.47 1.73
380 381 4.954089 AGTCCCTCCTTGAGAGTCTTATT 58.046 43.478 0.00 0.00 41.47 1.40
381 382 5.346270 AGTCCCTCCTTGAGAGTCTTATTT 58.654 41.667 0.00 0.00 41.47 1.40
382 383 5.423931 AGTCCCTCCTTGAGAGTCTTATTTC 59.576 44.000 0.00 0.00 41.47 2.17
383 384 5.187967 GTCCCTCCTTGAGAGTCTTATTTCA 59.812 44.000 0.00 0.00 41.47 2.69
384 385 5.966935 TCCCTCCTTGAGAGTCTTATTTCAT 59.033 40.000 0.00 0.00 41.47 2.57
385 386 7.070074 GTCCCTCCTTGAGAGTCTTATTTCATA 59.930 40.741 0.00 0.00 41.47 2.15
386 387 7.623677 TCCCTCCTTGAGAGTCTTATTTCATAA 59.376 37.037 0.00 0.00 41.47 1.90
387 388 7.930865 CCCTCCTTGAGAGTCTTATTTCATAAG 59.069 40.741 0.00 0.00 41.47 1.73
388 389 8.482128 CCTCCTTGAGAGTCTTATTTCATAAGT 58.518 37.037 0.00 0.00 41.47 2.24
389 390 9.528018 CTCCTTGAGAGTCTTATTTCATAAGTC 57.472 37.037 0.00 0.00 37.60 3.01
390 391 8.478877 TCCTTGAGAGTCTTATTTCATAAGTCC 58.521 37.037 0.00 0.00 42.21 3.85
391 392 7.713073 CCTTGAGAGTCTTATTTCATAAGTCCC 59.287 40.741 0.00 0.00 42.21 4.46
392 393 7.733773 TGAGAGTCTTATTTCATAAGTCCCA 57.266 36.000 0.00 0.00 42.21 4.37
393 394 8.146053 TGAGAGTCTTATTTCATAAGTCCCAA 57.854 34.615 0.00 0.00 42.21 4.12
394 395 8.602424 TGAGAGTCTTATTTCATAAGTCCCAAA 58.398 33.333 0.00 0.00 42.21 3.28
395 396 9.620259 GAGAGTCTTATTTCATAAGTCCCAAAT 57.380 33.333 0.00 0.00 42.21 2.32
396 397 9.401058 AGAGTCTTATTTCATAAGTCCCAAATG 57.599 33.333 3.93 0.00 42.21 2.32
397 398 8.000780 AGTCTTATTTCATAAGTCCCAAATGC 57.999 34.615 3.93 0.00 42.21 3.56
398 399 7.068716 AGTCTTATTTCATAAGTCCCAAATGCC 59.931 37.037 3.93 0.00 42.21 4.40
399 400 6.323739 TCTTATTTCATAAGTCCCAAATGCCC 59.676 38.462 3.93 0.00 42.21 5.36
400 401 3.464720 TTCATAAGTCCCAAATGCCCA 57.535 42.857 0.00 0.00 0.00 5.36
401 402 2.733956 TCATAAGTCCCAAATGCCCAC 58.266 47.619 0.00 0.00 0.00 4.61
402 403 2.311542 TCATAAGTCCCAAATGCCCACT 59.688 45.455 0.00 0.00 0.00 4.00
403 404 2.990740 TAAGTCCCAAATGCCCACTT 57.009 45.000 0.00 0.00 0.00 3.16
404 405 2.101640 AAGTCCCAAATGCCCACTTT 57.898 45.000 0.00 0.00 0.00 2.66
405 406 2.990740 AGTCCCAAATGCCCACTTTA 57.009 45.000 0.00 0.00 0.00 1.85
406 407 3.252554 AGTCCCAAATGCCCACTTTAA 57.747 42.857 0.00 0.00 0.00 1.52
407 408 3.165071 AGTCCCAAATGCCCACTTTAAG 58.835 45.455 0.00 0.00 0.00 1.85
408 409 2.897326 GTCCCAAATGCCCACTTTAAGT 59.103 45.455 0.00 0.00 0.00 2.24
409 410 3.056821 GTCCCAAATGCCCACTTTAAGTC 60.057 47.826 0.00 0.00 0.00 3.01
410 411 2.233676 CCCAAATGCCCACTTTAAGTCC 59.766 50.000 0.00 0.00 0.00 3.85
411 412 2.233676 CCAAATGCCCACTTTAAGTCCC 59.766 50.000 0.00 0.00 0.00 4.46
412 413 3.165071 CAAATGCCCACTTTAAGTCCCT 58.835 45.455 0.00 0.00 0.00 4.20
413 414 4.340617 CAAATGCCCACTTTAAGTCCCTA 58.659 43.478 0.00 0.00 0.00 3.53
414 415 4.881157 AATGCCCACTTTAAGTCCCTAT 57.119 40.909 0.00 0.00 0.00 2.57
415 416 5.987019 AATGCCCACTTTAAGTCCCTATA 57.013 39.130 0.00 0.00 0.00 1.31
416 417 5.987019 ATGCCCACTTTAAGTCCCTATAA 57.013 39.130 0.00 0.00 0.00 0.98
417 418 5.367945 TGCCCACTTTAAGTCCCTATAAG 57.632 43.478 0.00 0.00 0.00 1.73
418 419 4.786454 TGCCCACTTTAAGTCCCTATAAGT 59.214 41.667 0.00 0.00 0.00 2.24
419 420 5.104652 TGCCCACTTTAAGTCCCTATAAGTC 60.105 44.000 0.00 0.00 0.00 3.01
420 421 5.686913 GCCCACTTTAAGTCCCTATAAGTCC 60.687 48.000 0.00 0.00 0.00 3.85
421 422 5.163227 CCCACTTTAAGTCCCTATAAGTCCC 60.163 48.000 0.00 0.00 0.00 4.46
422 423 5.666265 CCACTTTAAGTCCCTATAAGTCCCT 59.334 44.000 0.00 0.00 0.00 4.20
423 424 6.183360 CCACTTTAAGTCCCTATAAGTCCCTC 60.183 46.154 0.00 0.00 0.00 4.30
424 425 5.904169 ACTTTAAGTCCCTATAAGTCCCTCC 59.096 44.000 0.00 0.00 0.00 4.30
425 426 5.763239 TTAAGTCCCTATAAGTCCCTCCT 57.237 43.478 0.00 0.00 0.00 3.69
426 427 3.621682 AGTCCCTATAAGTCCCTCCTG 57.378 52.381 0.00 0.00 0.00 3.86
427 428 2.866454 AGTCCCTATAAGTCCCTCCTGT 59.134 50.000 0.00 0.00 0.00 4.00
428 429 3.275228 AGTCCCTATAAGTCCCTCCTGTT 59.725 47.826 0.00 0.00 0.00 3.16
429 430 4.038633 GTCCCTATAAGTCCCTCCTGTTT 58.961 47.826 0.00 0.00 0.00 2.83
430 431 4.037927 TCCCTATAAGTCCCTCCTGTTTG 58.962 47.826 0.00 0.00 0.00 2.93
431 432 3.136626 CCCTATAAGTCCCTCCTGTTTGG 59.863 52.174 0.00 0.00 37.10 3.28
432 433 3.780850 CCTATAAGTCCCTCCTGTTTGGT 59.219 47.826 0.00 0.00 37.07 3.67
433 434 4.227527 CCTATAAGTCCCTCCTGTTTGGTT 59.772 45.833 0.00 0.00 37.07 3.67
434 435 4.741928 ATAAGTCCCTCCTGTTTGGTTT 57.258 40.909 0.00 0.00 37.07 3.27
435 436 5.853572 ATAAGTCCCTCCTGTTTGGTTTA 57.146 39.130 0.00 0.00 37.07 2.01
436 437 3.790089 AGTCCCTCCTGTTTGGTTTAG 57.210 47.619 0.00 0.00 37.07 1.85
437 438 3.323775 AGTCCCTCCTGTTTGGTTTAGA 58.676 45.455 0.00 0.00 37.07 2.10
438 439 3.916989 AGTCCCTCCTGTTTGGTTTAGAT 59.083 43.478 0.00 0.00 37.07 1.98
439 440 4.010349 GTCCCTCCTGTTTGGTTTAGATG 58.990 47.826 0.00 0.00 37.07 2.90
440 441 3.010138 TCCCTCCTGTTTGGTTTAGATGG 59.990 47.826 0.00 0.00 37.07 3.51
441 442 3.356290 CCTCCTGTTTGGTTTAGATGGG 58.644 50.000 0.00 0.00 37.07 4.00
442 443 3.010138 CCTCCTGTTTGGTTTAGATGGGA 59.990 47.826 0.00 0.00 37.07 4.37
443 444 4.010349 CTCCTGTTTGGTTTAGATGGGAC 58.990 47.826 0.00 0.00 37.07 4.46
444 445 3.655777 TCCTGTTTGGTTTAGATGGGACT 59.344 43.478 0.00 0.00 37.07 3.85
445 446 4.105697 TCCTGTTTGGTTTAGATGGGACTT 59.894 41.667 0.00 0.00 37.07 3.01
446 447 5.311121 TCCTGTTTGGTTTAGATGGGACTTA 59.689 40.000 0.00 0.00 37.07 2.24
447 448 6.007703 CCTGTTTGGTTTAGATGGGACTTAA 58.992 40.000 0.00 0.00 0.00 1.85
448 449 6.492087 CCTGTTTGGTTTAGATGGGACTTAAA 59.508 38.462 0.00 0.00 0.00 1.52
449 450 7.309194 CCTGTTTGGTTTAGATGGGACTTAAAG 60.309 40.741 0.00 0.00 0.00 1.85
450 451 6.492087 TGTTTGGTTTAGATGGGACTTAAAGG 59.508 38.462 0.00 0.00 0.00 3.11
451 452 5.187621 TGGTTTAGATGGGACTTAAAGGG 57.812 43.478 0.00 0.00 0.00 3.95
452 453 4.853276 TGGTTTAGATGGGACTTAAAGGGA 59.147 41.667 0.00 0.00 0.00 4.20
453 454 5.191426 GGTTTAGATGGGACTTAAAGGGAC 58.809 45.833 0.00 0.00 0.00 4.46
480 481 8.625786 TTTTTAAGTCCCTACACCAATAAGTC 57.374 34.615 0.00 0.00 0.00 3.01
481 482 4.838904 AAGTCCCTACACCAATAAGTCC 57.161 45.455 0.00 0.00 0.00 3.85
482 483 3.113043 AGTCCCTACACCAATAAGTCCC 58.887 50.000 0.00 0.00 0.00 4.46
483 484 3.113043 GTCCCTACACCAATAAGTCCCT 58.887 50.000 0.00 0.00 0.00 4.20
484 485 3.112263 TCCCTACACCAATAAGTCCCTG 58.888 50.000 0.00 0.00 0.00 4.45
485 486 2.844348 CCCTACACCAATAAGTCCCTGT 59.156 50.000 0.00 0.00 0.00 4.00
486 487 4.035112 CCCTACACCAATAAGTCCCTGTA 58.965 47.826 0.00 0.00 0.00 2.74
487 488 4.472108 CCCTACACCAATAAGTCCCTGTAA 59.528 45.833 0.00 0.00 0.00 2.41
488 489 5.425630 CCTACACCAATAAGTCCCTGTAAC 58.574 45.833 0.00 0.00 0.00 2.50
489 490 4.296621 ACACCAATAAGTCCCTGTAACC 57.703 45.455 0.00 0.00 0.00 2.85
490 491 3.653836 ACACCAATAAGTCCCTGTAACCA 59.346 43.478 0.00 0.00 0.00 3.67
491 492 4.105057 ACACCAATAAGTCCCTGTAACCAA 59.895 41.667 0.00 0.00 0.00 3.67
492 493 5.074115 CACCAATAAGTCCCTGTAACCAAA 58.926 41.667 0.00 0.00 0.00 3.28
493 494 5.048294 CACCAATAAGTCCCTGTAACCAAAC 60.048 44.000 0.00 0.00 0.00 2.93
494 495 5.074115 CCAATAAGTCCCTGTAACCAAACA 58.926 41.667 0.00 0.00 0.00 2.83
495 496 5.048294 CCAATAAGTCCCTGTAACCAAACAC 60.048 44.000 0.00 0.00 0.00 3.32
496 497 2.651382 AGTCCCTGTAACCAAACACC 57.349 50.000 0.00 0.00 0.00 4.16
497 498 2.132686 AGTCCCTGTAACCAAACACCT 58.867 47.619 0.00 0.00 0.00 4.00
498 499 2.512476 AGTCCCTGTAACCAAACACCTT 59.488 45.455 0.00 0.00 0.00 3.50
560 562 2.753168 GCAAAGGAGGTCTGGAAAAGGT 60.753 50.000 0.00 0.00 0.00 3.50
615 617 4.988716 TGACCGTGCGGGAGAGGT 62.989 66.667 15.44 0.00 39.97 3.85
650 659 8.896658 AGTATCTACTACTCCTACCAGATCAAT 58.103 37.037 0.00 0.00 35.73 2.57
902 917 4.275689 TGTTGACGCTTCTTTTGATCATGT 59.724 37.500 0.00 0.00 0.00 3.21
913 928 8.924511 TTCTTTTGATCATGTTCTTCTTAGGT 57.075 30.769 0.00 0.00 0.00 3.08
934 949 1.497309 TTCCATGGGAGCGGTCCTTT 61.497 55.000 31.09 17.05 43.36 3.11
1161 1177 4.848299 GCAATCTTCGATGACTGTTTTCAC 59.152 41.667 10.84 0.00 0.00 3.18
1184 1200 5.932303 ACTATGCTTGTGATTTCGTTACTGT 59.068 36.000 0.00 0.00 0.00 3.55
1299 1316 9.875691 GAGGAGCCTTTAAATGAAATTGTAATT 57.124 29.630 0.00 0.00 36.10 1.40
1383 1402 5.193679 AGACTTGTGCCACTTTTCTTACTT 58.806 37.500 0.00 0.00 0.00 2.24
1472 1494 6.540914 TCCAAAGTGTCTCGTAAAGTTTCATT 59.459 34.615 0.00 0.00 0.00 2.57
1475 1497 8.332464 CAAAGTGTCTCGTAAAGTTTCATTGTA 58.668 33.333 0.00 0.00 0.00 2.41
1479 1501 8.378421 GTGTCTCGTAAAGTTTCATTGTATACC 58.622 37.037 0.00 0.00 0.00 2.73
1480 1502 8.089597 TGTCTCGTAAAGTTTCATTGTATACCA 58.910 33.333 0.00 0.00 0.00 3.25
1501 1524 5.594317 ACCAACAATAAGAGTGCACTTCTTT 59.406 36.000 25.96 20.28 0.00 2.52
1508 1531 8.939929 CAATAAGAGTGCACTTCTTTCTGATTA 58.060 33.333 25.96 13.55 0.00 1.75
1509 1532 9.507329 AATAAGAGTGCACTTCTTTCTGATTAA 57.493 29.630 25.96 13.05 0.00 1.40
1569 1592 5.635280 TCAATGCACGTTGAAACAAGAAAAA 59.365 32.000 2.83 0.00 35.31 1.94
1570 1593 5.701029 ATGCACGTTGAAACAAGAAAAAG 57.299 34.783 0.00 0.00 0.00 2.27
1573 1596 5.866633 TGCACGTTGAAACAAGAAAAAGAAT 59.133 32.000 0.00 0.00 0.00 2.40
1574 1597 6.034470 TGCACGTTGAAACAAGAAAAAGAATC 59.966 34.615 0.00 0.00 0.00 2.52
1575 1598 6.034470 GCACGTTGAAACAAGAAAAAGAATCA 59.966 34.615 0.00 0.00 0.00 2.57
1576 1599 7.603515 CACGTTGAAACAAGAAAAAGAATCAG 58.396 34.615 0.00 0.00 0.00 2.90
1577 1600 7.273381 CACGTTGAAACAAGAAAAAGAATCAGT 59.727 33.333 0.00 0.00 0.00 3.41
1580 1603 9.567848 GTTGAAACAAGAAAAAGAATCAGTGTA 57.432 29.630 0.00 0.00 0.00 2.90
1606 1629 7.141363 ACACTATGAAACAAGACAAAATCTGC 58.859 34.615 0.00 0.00 37.88 4.26
1613 1636 4.886579 ACAAGACAAAATCTGCCAATTCC 58.113 39.130 0.00 0.00 37.88 3.01
1614 1637 4.248058 CAAGACAAAATCTGCCAATTCCC 58.752 43.478 0.00 0.00 37.88 3.97
1615 1638 2.833943 AGACAAAATCTGCCAATTCCCC 59.166 45.455 0.00 0.00 35.81 4.81
1616 1639 1.908619 ACAAAATCTGCCAATTCCCCC 59.091 47.619 0.00 0.00 0.00 5.40
1637 1660 5.129155 CCCCCAAAATAGCATGAATCTCAAA 59.871 40.000 0.00 0.00 0.00 2.69
1640 1663 6.334989 CCAAAATAGCATGAATCTCAAAGCA 58.665 36.000 0.00 0.00 35.02 3.91
1643 1666 3.482722 AGCATGAATCTCAAAGCAACG 57.517 42.857 0.00 0.00 35.02 4.10
1644 1667 3.076621 AGCATGAATCTCAAAGCAACGA 58.923 40.909 0.00 0.00 35.02 3.85
1653 1676 3.189080 TCTCAAAGCAACGATGAATGGTG 59.811 43.478 0.00 0.00 0.00 4.17
1686 1709 2.026262 GGCATACCCCCATGTATGGTAG 60.026 54.545 9.87 3.51 46.65 3.18
1689 1712 4.018415 GCATACCCCCATGTATGGTAGAAT 60.018 45.833 9.87 0.00 46.65 2.40
1690 1713 5.190925 GCATACCCCCATGTATGGTAGAATA 59.809 44.000 9.87 0.00 46.65 1.75
1692 1715 3.587506 ACCCCCATGTATGGTAGAATAGC 59.412 47.826 9.87 0.00 46.65 2.97
1701 1724 9.553064 CATGTATGGTAGAATAGCTTTTCTCTT 57.447 33.333 20.81 9.90 40.38 2.85
1732 1755 2.563179 AGCTCTCGAAGGCTTTGACTTA 59.437 45.455 13.24 1.76 34.96 2.24
1735 1758 3.314553 TCTCGAAGGCTTTGACTTAACG 58.685 45.455 13.24 3.80 26.99 3.18
1739 1762 3.400255 GAAGGCTTTGACTTAACGTCCT 58.600 45.455 0.00 0.00 42.13 3.85
1753 1776 1.149401 GTCCTTAGCCCTCATGCCC 59.851 63.158 0.00 0.00 0.00 5.36
1760 1783 3.010413 GCCCTCATGCCCTTGTTGC 62.010 63.158 0.00 0.00 0.00 4.17
1764 1787 0.896940 CTCATGCCCTTGTTGCACCT 60.897 55.000 0.00 0.00 42.38 4.00
1768 1791 2.846532 CCCTTGTTGCACCTCCCT 59.153 61.111 0.00 0.00 0.00 4.20
1787 1810 2.383855 CTGAGGAGACGAGATTTCCCT 58.616 52.381 0.00 0.00 0.00 4.20
1794 1818 2.766828 AGACGAGATTTCCCTAAGGGTG 59.233 50.000 0.00 0.00 44.74 4.61
1802 1826 5.550403 AGATTTCCCTAAGGGTGTTCTGTTA 59.450 40.000 0.00 0.00 44.74 2.41
1810 1834 5.767816 AAGGGTGTTCTGTTATTGACAAC 57.232 39.130 0.00 0.00 37.93 3.32
1820 1844 9.612620 GTTCTGTTATTGACAACTTTATCTTGG 57.387 33.333 0.00 0.00 37.93 3.61
1824 1848 7.504238 TGTTATTGACAACTTTATCTTGGTGGT 59.496 33.333 0.00 0.00 34.69 4.16
1826 1850 4.141287 TGACAACTTTATCTTGGTGGTGG 58.859 43.478 0.00 0.00 0.00 4.61
1831 1855 2.787473 TTATCTTGGTGGTGGAGCTG 57.213 50.000 0.00 0.00 0.00 4.24
1848 1872 1.039068 CTGGTCCAATGTTGCCACAA 58.961 50.000 0.00 0.00 36.16 3.33
1877 1901 5.049612 GGGTTGACTTTAGTTGTACTCAAGC 60.050 44.000 9.61 9.61 33.82 4.01
1879 1903 6.073711 GGTTGACTTTAGTTGTACTCAAGCTC 60.074 42.308 10.43 0.00 33.82 4.09
1887 1911 1.544691 TGTACTCAAGCTCGACTTCCC 59.455 52.381 0.00 0.00 36.04 3.97
1899 1923 1.443802 GACTTCCCGAAAGCCTTCAG 58.556 55.000 0.00 0.00 38.67 3.02
1900 1924 0.606673 ACTTCCCGAAAGCCTTCAGC 60.607 55.000 0.00 0.00 38.67 4.26
1901 1925 1.303317 TTCCCGAAAGCCTTCAGCC 60.303 57.895 0.00 0.00 45.47 4.85
1902 1926 2.751837 CCCGAAAGCCTTCAGCCC 60.752 66.667 0.00 0.00 45.47 5.19
1904 1928 3.127533 CGAAAGCCTTCAGCCCCG 61.128 66.667 0.00 0.00 45.47 5.73
1905 1929 2.034221 GAAAGCCTTCAGCCCCGT 59.966 61.111 0.00 0.00 45.47 5.28
1906 1930 2.034221 AAAGCCTTCAGCCCCGTC 59.966 61.111 0.00 0.00 45.47 4.79
1907 1931 2.470938 GAAAGCCTTCAGCCCCGTCT 62.471 60.000 0.00 0.00 45.47 4.18
1926 1951 4.579869 GTCTTCTGGCTTAACCTTGATCA 58.420 43.478 0.00 0.00 40.22 2.92
1930 1955 5.692115 TCTGGCTTAACCTTGATCATGTA 57.308 39.130 0.00 0.00 40.22 2.29
1933 1958 5.185454 TGGCTTAACCTTGATCATGTACTG 58.815 41.667 0.00 0.00 40.22 2.74
1970 1995 3.134458 GTGGATGCACTATGTCTTAGGC 58.866 50.000 10.51 0.00 31.68 3.93
1978 2003 4.684485 GCACTATGTCTTAGGCCTCAATGT 60.684 45.833 9.68 1.44 31.68 2.71
1990 2015 2.159028 GCCTCAATGTCTCCTACCACTC 60.159 54.545 0.00 0.00 0.00 3.51
1996 2021 1.073444 TGTCTCCTACCACTCTGTCGT 59.927 52.381 0.00 0.00 0.00 4.34
2006 2031 3.259374 ACCACTCTGTCGTCATTCTCAAT 59.741 43.478 0.00 0.00 0.00 2.57
2009 2034 5.393569 CCACTCTGTCGTCATTCTCAATAGT 60.394 44.000 0.00 0.00 0.00 2.12
2015 2040 4.023980 TCGTCATTCTCAATAGTGTCCCT 58.976 43.478 0.00 0.00 0.00 4.20
2032 2057 0.037232 CCTCGACAAGTGGACTTCCC 60.037 60.000 0.00 0.00 35.58 3.97
2033 2058 0.679505 CTCGACAAGTGGACTTCCCA 59.320 55.000 0.00 0.00 44.25 4.37
2061 2086 4.176752 GCTCCGACATGGGACCCC 62.177 72.222 8.45 2.69 38.76 4.95
2092 2117 3.275617 TTATATTGGCCGCAACTGTCT 57.724 42.857 0.00 0.00 0.00 3.41
2095 2120 0.537143 ATTGGCCGCAACTGTCTTGA 60.537 50.000 0.00 0.00 0.00 3.02
2102 2127 1.264288 CGCAACTGTCTTGAAAGGACC 59.736 52.381 0.00 0.00 33.22 4.46
2104 2129 1.873591 CAACTGTCTTGAAAGGACCCG 59.126 52.381 0.00 0.00 33.22 5.28
2129 2154 3.976339 CTATTGGAGCAGAGGACGG 57.024 57.895 0.00 0.00 0.00 4.79
2130 2155 1.403814 CTATTGGAGCAGAGGACGGA 58.596 55.000 0.00 0.00 0.00 4.69
2131 2156 1.067821 CTATTGGAGCAGAGGACGGAC 59.932 57.143 0.00 0.00 0.00 4.79
2132 2157 0.616111 ATTGGAGCAGAGGACGGACT 60.616 55.000 0.00 0.00 0.00 3.85
2133 2158 1.536073 TTGGAGCAGAGGACGGACTG 61.536 60.000 0.00 0.00 37.22 3.51
2137 2162 4.268687 CAGAGGACGGACTGCAAC 57.731 61.111 0.00 0.00 0.00 4.17
2138 2163 1.367471 CAGAGGACGGACTGCAACA 59.633 57.895 0.00 0.00 0.00 3.33
2139 2164 0.946221 CAGAGGACGGACTGCAACAC 60.946 60.000 0.00 0.00 0.00 3.32
2140 2165 1.668151 GAGGACGGACTGCAACACC 60.668 63.158 0.00 0.00 0.00 4.16
2141 2166 2.668550 GGACGGACTGCAACACCC 60.669 66.667 0.00 0.00 0.00 4.61
2142 2167 2.668550 GACGGACTGCAACACCCC 60.669 66.667 0.00 0.00 0.00 4.95
2143 2168 3.469863 GACGGACTGCAACACCCCA 62.470 63.158 0.00 0.00 0.00 4.96
2144 2169 2.034066 CGGACTGCAACACCCCAT 59.966 61.111 0.00 0.00 0.00 4.00
2145 2170 2.040544 CGGACTGCAACACCCCATC 61.041 63.158 0.00 0.00 0.00 3.51
2146 2171 1.074775 GGACTGCAACACCCCATCA 59.925 57.895 0.00 0.00 0.00 3.07
2147 2172 0.323725 GGACTGCAACACCCCATCAT 60.324 55.000 0.00 0.00 0.00 2.45
2148 2173 1.098050 GACTGCAACACCCCATCATC 58.902 55.000 0.00 0.00 0.00 2.92
2149 2174 0.323725 ACTGCAACACCCCATCATCC 60.324 55.000 0.00 0.00 0.00 3.51
2150 2175 0.323633 CTGCAACACCCCATCATCCA 60.324 55.000 0.00 0.00 0.00 3.41
2151 2176 0.611618 TGCAACACCCCATCATCCAC 60.612 55.000 0.00 0.00 0.00 4.02
2152 2177 0.611618 GCAACACCCCATCATCCACA 60.612 55.000 0.00 0.00 0.00 4.17
2153 2178 1.466856 CAACACCCCATCATCCACAG 58.533 55.000 0.00 0.00 0.00 3.66
2154 2179 0.323725 AACACCCCATCATCCACAGC 60.324 55.000 0.00 0.00 0.00 4.40
2155 2180 1.454479 CACCCCATCATCCACAGCC 60.454 63.158 0.00 0.00 0.00 4.85
2156 2181 1.930133 ACCCCATCATCCACAGCCA 60.930 57.895 0.00 0.00 0.00 4.75
2157 2182 1.152819 CCCCATCATCCACAGCCAG 60.153 63.158 0.00 0.00 0.00 4.85
2158 2183 1.611419 CCCATCATCCACAGCCAGT 59.389 57.895 0.00 0.00 0.00 4.00
2159 2184 0.839277 CCCATCATCCACAGCCAGTA 59.161 55.000 0.00 0.00 0.00 2.74
2160 2185 1.202734 CCCATCATCCACAGCCAGTAG 60.203 57.143 0.00 0.00 0.00 2.57
2161 2186 1.487976 CCATCATCCACAGCCAGTAGT 59.512 52.381 0.00 0.00 0.00 2.73
2162 2187 2.700371 CCATCATCCACAGCCAGTAGTA 59.300 50.000 0.00 0.00 0.00 1.82
2163 2188 3.244009 CCATCATCCACAGCCAGTAGTAG 60.244 52.174 0.00 0.00 0.00 2.57
2164 2189 1.757118 TCATCCACAGCCAGTAGTAGC 59.243 52.381 0.00 0.00 0.00 3.58
2165 2190 0.747255 ATCCACAGCCAGTAGTAGCG 59.253 55.000 0.00 0.00 0.00 4.26
2166 2191 0.611062 TCCACAGCCAGTAGTAGCGT 60.611 55.000 0.00 0.00 0.00 5.07
2167 2192 0.179134 CCACAGCCAGTAGTAGCGTC 60.179 60.000 0.00 0.00 0.00 5.19
2168 2193 0.526211 CACAGCCAGTAGTAGCGTCA 59.474 55.000 0.00 0.00 0.00 4.35
2169 2194 0.811915 ACAGCCAGTAGTAGCGTCAG 59.188 55.000 0.00 0.00 0.00 3.51
2170 2195 0.526524 CAGCCAGTAGTAGCGTCAGC 60.527 60.000 0.00 0.00 45.58 4.26
2192 2217 3.414272 GCATACGCTCCAGGCAAG 58.586 61.111 0.00 0.00 41.91 4.01
2193 2218 2.828128 GCATACGCTCCAGGCAAGC 61.828 63.158 0.00 0.00 41.91 4.01
2194 2219 1.450134 CATACGCTCCAGGCAAGCA 60.450 57.895 1.24 0.00 39.81 3.91
2195 2220 0.816825 CATACGCTCCAGGCAAGCAT 60.817 55.000 1.24 0.00 39.81 3.79
2196 2221 0.107017 ATACGCTCCAGGCAAGCATT 60.107 50.000 1.24 0.00 39.81 3.56
2209 2234 3.670311 CAAGCATTGTAGCTGCAGTAG 57.330 47.619 16.64 0.36 45.89 2.57
2210 2235 2.223203 CAAGCATTGTAGCTGCAGTAGC 60.223 50.000 16.64 10.43 45.89 3.58
2223 2248 4.844998 TGCAGTAGCTACAATGCAAAAA 57.155 36.364 28.73 12.87 45.09 1.94
2244 2269 7.938140 AAAAAGCTACAATGGCTATAGTCAA 57.062 32.000 11.80 0.00 39.30 3.18
2245 2270 6.927294 AAAGCTACAATGGCTATAGTCAAC 57.073 37.500 11.80 0.00 39.30 3.18
2246 2271 5.614324 AGCTACAATGGCTATAGTCAACA 57.386 39.130 11.80 1.30 38.36 3.33
2247 2272 5.989477 AGCTACAATGGCTATAGTCAACAA 58.011 37.500 11.80 0.00 38.36 2.83
2248 2273 6.051717 AGCTACAATGGCTATAGTCAACAAG 58.948 40.000 11.80 7.88 38.36 3.16
2249 2274 5.237344 GCTACAATGGCTATAGTCAACAAGG 59.763 44.000 11.80 3.68 31.21 3.61
2250 2275 5.435686 ACAATGGCTATAGTCAACAAGGA 57.564 39.130 11.80 0.00 31.21 3.36
2251 2276 6.006275 ACAATGGCTATAGTCAACAAGGAT 57.994 37.500 11.80 0.00 31.21 3.24
2252 2277 6.058183 ACAATGGCTATAGTCAACAAGGATC 58.942 40.000 11.80 0.00 31.21 3.36
2253 2278 6.126652 ACAATGGCTATAGTCAACAAGGATCT 60.127 38.462 11.80 0.00 31.21 2.75
2254 2279 5.537300 TGGCTATAGTCAACAAGGATCTC 57.463 43.478 4.08 0.00 0.00 2.75
2255 2280 5.211973 TGGCTATAGTCAACAAGGATCTCT 58.788 41.667 4.08 0.00 0.00 3.10
2256 2281 5.303078 TGGCTATAGTCAACAAGGATCTCTC 59.697 44.000 4.08 0.00 0.00 3.20
2257 2282 5.279256 GGCTATAGTCAACAAGGATCTCTCC 60.279 48.000 0.00 0.00 42.43 3.71
2258 2283 5.279256 GCTATAGTCAACAAGGATCTCTCCC 60.279 48.000 0.84 0.00 43.21 4.30
2259 2284 2.907892 AGTCAACAAGGATCTCTCCCA 58.092 47.619 0.00 0.00 43.21 4.37
2260 2285 2.569404 AGTCAACAAGGATCTCTCCCAC 59.431 50.000 0.00 0.00 43.21 4.61
2261 2286 1.909302 TCAACAAGGATCTCTCCCACC 59.091 52.381 0.00 0.00 43.21 4.61
2262 2287 1.630369 CAACAAGGATCTCTCCCACCA 59.370 52.381 0.00 0.00 43.21 4.17
2263 2288 2.240667 CAACAAGGATCTCTCCCACCAT 59.759 50.000 0.00 0.00 43.21 3.55
2264 2289 1.842562 ACAAGGATCTCTCCCACCATG 59.157 52.381 0.00 0.00 43.21 3.66
2265 2290 0.842635 AAGGATCTCTCCCACCATGC 59.157 55.000 0.00 0.00 43.21 4.06
2266 2291 1.059006 AGGATCTCTCCCACCATGCC 61.059 60.000 0.00 0.00 43.21 4.40
2267 2292 1.453669 GATCTCTCCCACCATGCCC 59.546 63.158 0.00 0.00 0.00 5.36
2268 2293 1.005289 ATCTCTCCCACCATGCCCT 59.995 57.895 0.00 0.00 0.00 5.19
2269 2294 0.268869 ATCTCTCCCACCATGCCCTA 59.731 55.000 0.00 0.00 0.00 3.53
2270 2295 0.399091 TCTCTCCCACCATGCCCTAG 60.399 60.000 0.00 0.00 0.00 3.02
2271 2296 1.384502 TCTCCCACCATGCCCTAGG 60.385 63.158 0.06 0.06 0.00 3.02
2272 2297 1.384502 CTCCCACCATGCCCTAGGA 60.385 63.158 11.48 0.00 0.00 2.94
2273 2298 0.988145 CTCCCACCATGCCCTAGGAA 60.988 60.000 11.48 0.00 0.00 3.36
2274 2299 0.551377 TCCCACCATGCCCTAGGAAA 60.551 55.000 11.48 0.00 0.00 3.13
2275 2300 0.395724 CCCACCATGCCCTAGGAAAC 60.396 60.000 11.48 0.00 0.00 2.78
2276 2301 0.748005 CCACCATGCCCTAGGAAACG 60.748 60.000 11.48 0.00 0.00 3.60
2277 2302 0.748005 CACCATGCCCTAGGAAACGG 60.748 60.000 11.48 8.02 0.00 4.44
2278 2303 1.823899 CCATGCCCTAGGAAACGGC 60.824 63.158 11.48 5.04 43.32 5.68
2279 2304 1.823899 CATGCCCTAGGAAACGGCC 60.824 63.158 11.48 0.00 42.29 6.13
2280 2305 3.056754 ATGCCCTAGGAAACGGCCC 62.057 63.158 11.48 0.00 42.29 5.80
2281 2306 4.851179 GCCCTAGGAAACGGCCCG 62.851 72.222 11.48 0.00 36.63 6.13
2282 2307 4.171103 CCCTAGGAAACGGCCCGG 62.171 72.222 11.48 0.00 0.00 5.73
2283 2308 4.171103 CCTAGGAAACGGCCCGGG 62.171 72.222 19.09 19.09 0.00 5.73
2284 2309 3.396570 CTAGGAAACGGCCCGGGT 61.397 66.667 24.63 0.00 0.00 5.28
2285 2310 2.929477 TAGGAAACGGCCCGGGTT 60.929 61.111 24.63 8.32 0.00 4.11
2286 2311 3.256824 TAGGAAACGGCCCGGGTTG 62.257 63.158 24.63 17.57 0.00 3.77
2310 2335 3.064324 GCTTGAGGCCGCCATTGT 61.064 61.111 13.15 0.00 34.27 2.71
2311 2336 1.748879 GCTTGAGGCCGCCATTGTA 60.749 57.895 13.15 0.00 34.27 2.41
2312 2337 1.993369 GCTTGAGGCCGCCATTGTAC 61.993 60.000 13.15 0.00 34.27 2.90
2313 2338 0.676466 CTTGAGGCCGCCATTGTACA 60.676 55.000 13.15 0.00 0.00 2.90
2314 2339 0.958382 TTGAGGCCGCCATTGTACAC 60.958 55.000 13.15 0.00 0.00 2.90
2315 2340 1.376683 GAGGCCGCCATTGTACACA 60.377 57.895 13.15 0.00 0.00 3.72
2316 2341 1.644786 GAGGCCGCCATTGTACACAC 61.645 60.000 13.15 0.00 0.00 3.82
2317 2342 2.696759 GGCCGCCATTGTACACACC 61.697 63.158 3.91 0.00 0.00 4.16
2318 2343 2.696759 GCCGCCATTGTACACACCC 61.697 63.158 0.00 0.00 0.00 4.61
2319 2344 2.043980 CCGCCATTGTACACACCCC 61.044 63.158 0.00 0.00 0.00 4.95
2320 2345 1.302913 CGCCATTGTACACACCCCA 60.303 57.895 0.00 0.00 0.00 4.96
2321 2346 1.582610 CGCCATTGTACACACCCCAC 61.583 60.000 0.00 0.00 0.00 4.61
2322 2347 0.251165 GCCATTGTACACACCCCACT 60.251 55.000 0.00 0.00 0.00 4.00
2323 2348 1.003812 GCCATTGTACACACCCCACTA 59.996 52.381 0.00 0.00 0.00 2.74
2324 2349 2.706890 CCATTGTACACACCCCACTAC 58.293 52.381 0.00 0.00 0.00 2.73
2325 2350 2.304761 CCATTGTACACACCCCACTACT 59.695 50.000 0.00 0.00 0.00 2.57
2326 2351 3.516300 CCATTGTACACACCCCACTACTA 59.484 47.826 0.00 0.00 0.00 1.82
2327 2352 4.163458 CCATTGTACACACCCCACTACTAT 59.837 45.833 0.00 0.00 0.00 2.12
2328 2353 5.364446 CCATTGTACACACCCCACTACTATA 59.636 44.000 0.00 0.00 0.00 1.31
2329 2354 5.920193 TTGTACACACCCCACTACTATAC 57.080 43.478 0.00 0.00 0.00 1.47
2330 2355 4.280819 TGTACACACCCCACTACTATACC 58.719 47.826 0.00 0.00 0.00 2.73
2331 2356 3.478175 ACACACCCCACTACTATACCA 57.522 47.619 0.00 0.00 0.00 3.25
2332 2357 4.003584 ACACACCCCACTACTATACCAT 57.996 45.455 0.00 0.00 0.00 3.55
2333 2358 4.368067 ACACACCCCACTACTATACCATT 58.632 43.478 0.00 0.00 0.00 3.16
2334 2359 4.407945 ACACACCCCACTACTATACCATTC 59.592 45.833 0.00 0.00 0.00 2.67
2335 2360 3.971971 ACACCCCACTACTATACCATTCC 59.028 47.826 0.00 0.00 0.00 3.01
2336 2361 3.326880 CACCCCACTACTATACCATTCCC 59.673 52.174 0.00 0.00 0.00 3.97
2337 2362 3.211465 ACCCCACTACTATACCATTCCCT 59.789 47.826 0.00 0.00 0.00 4.20
2338 2363 4.424646 ACCCCACTACTATACCATTCCCTA 59.575 45.833 0.00 0.00 0.00 3.53
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.205064 CAAACACTGAAGCGAGCCG 59.795 57.895 0.00 0.00 0.00 5.52
1 2 1.461127 CTACAAACACTGAAGCGAGCC 59.539 52.381 0.00 0.00 0.00 4.70
2 3 2.135933 ACTACAAACACTGAAGCGAGC 58.864 47.619 0.00 0.00 0.00 5.03
3 4 2.405357 CGACTACAAACACTGAAGCGAG 59.595 50.000 0.00 0.00 0.00 5.03
4 5 2.223641 ACGACTACAAACACTGAAGCGA 60.224 45.455 0.00 0.00 0.00 4.93
5 6 2.124903 ACGACTACAAACACTGAAGCG 58.875 47.619 0.00 0.00 0.00 4.68
6 7 2.153247 CGACGACTACAAACACTGAAGC 59.847 50.000 0.00 0.00 0.00 3.86
7 8 2.153247 GCGACGACTACAAACACTGAAG 59.847 50.000 0.00 0.00 0.00 3.02
8 9 2.121786 GCGACGACTACAAACACTGAA 58.878 47.619 0.00 0.00 0.00 3.02
9 10 1.335810 AGCGACGACTACAAACACTGA 59.664 47.619 0.00 0.00 0.00 3.41
10 11 1.767289 AGCGACGACTACAAACACTG 58.233 50.000 0.00 0.00 0.00 3.66
11 12 2.095364 CCTAGCGACGACTACAAACACT 60.095 50.000 0.00 0.00 0.00 3.55
12 13 2.248487 CCTAGCGACGACTACAAACAC 58.752 52.381 0.00 0.00 0.00 3.32
13 14 1.881973 ACCTAGCGACGACTACAAACA 59.118 47.619 0.00 0.00 0.00 2.83
14 15 2.248487 CACCTAGCGACGACTACAAAC 58.752 52.381 0.00 0.00 0.00 2.93
15 16 1.200716 CCACCTAGCGACGACTACAAA 59.799 52.381 0.00 0.00 0.00 2.83
16 17 0.806868 CCACCTAGCGACGACTACAA 59.193 55.000 0.00 0.00 0.00 2.41
17 18 0.321919 ACCACCTAGCGACGACTACA 60.322 55.000 0.00 0.00 0.00 2.74
18 19 0.376502 GACCACCTAGCGACGACTAC 59.623 60.000 0.00 0.00 0.00 2.73
19 20 0.251354 AGACCACCTAGCGACGACTA 59.749 55.000 0.00 0.00 0.00 2.59
20 21 0.251354 TAGACCACCTAGCGACGACT 59.749 55.000 0.00 0.00 0.00 4.18
21 22 0.376502 GTAGACCACCTAGCGACGAC 59.623 60.000 0.00 0.00 0.00 4.34
22 23 1.086067 CGTAGACCACCTAGCGACGA 61.086 60.000 0.00 0.00 0.00 4.20
23 24 1.351012 CGTAGACCACCTAGCGACG 59.649 63.158 0.00 0.00 0.00 5.12
24 25 0.745845 TCCGTAGACCACCTAGCGAC 60.746 60.000 0.00 0.00 0.00 5.19
25 26 0.182061 ATCCGTAGACCACCTAGCGA 59.818 55.000 0.00 0.00 0.00 4.93
26 27 0.592148 GATCCGTAGACCACCTAGCG 59.408 60.000 0.00 0.00 0.00 4.26
27 28 1.609555 CAGATCCGTAGACCACCTAGC 59.390 57.143 0.00 0.00 0.00 3.42
28 29 2.158652 TCCAGATCCGTAGACCACCTAG 60.159 54.545 0.00 0.00 0.00 3.02
29 30 1.848388 TCCAGATCCGTAGACCACCTA 59.152 52.381 0.00 0.00 0.00 3.08
30 31 0.629596 TCCAGATCCGTAGACCACCT 59.370 55.000 0.00 0.00 0.00 4.00
31 32 1.341531 CATCCAGATCCGTAGACCACC 59.658 57.143 0.00 0.00 0.00 4.61
32 33 2.032620 ACATCCAGATCCGTAGACCAC 58.967 52.381 0.00 0.00 0.00 4.16
33 34 2.454336 ACATCCAGATCCGTAGACCA 57.546 50.000 0.00 0.00 0.00 4.02
34 35 5.470047 AATTACATCCAGATCCGTAGACC 57.530 43.478 0.00 0.00 0.00 3.85
35 36 7.787725 AAAAATTACATCCAGATCCGTAGAC 57.212 36.000 0.00 0.00 0.00 2.59
63 64 9.302345 CATGATAGTACAACGAACACTAGAAAT 57.698 33.333 0.00 0.00 0.00 2.17
64 65 8.517056 TCATGATAGTACAACGAACACTAGAAA 58.483 33.333 0.00 0.00 0.00 2.52
65 66 8.047413 TCATGATAGTACAACGAACACTAGAA 57.953 34.615 0.00 0.00 0.00 2.10
66 67 7.619964 TCATGATAGTACAACGAACACTAGA 57.380 36.000 0.00 0.00 0.00 2.43
67 68 8.746751 CAATCATGATAGTACAACGAACACTAG 58.253 37.037 9.04 0.00 0.00 2.57
68 69 8.463607 TCAATCATGATAGTACAACGAACACTA 58.536 33.333 9.04 0.00 0.00 2.74
69 70 7.320399 TCAATCATGATAGTACAACGAACACT 58.680 34.615 9.04 0.00 0.00 3.55
70 71 7.520119 TCAATCATGATAGTACAACGAACAC 57.480 36.000 9.04 0.00 0.00 3.32
71 72 8.032451 TCTTCAATCATGATAGTACAACGAACA 58.968 33.333 9.04 0.00 34.96 3.18
72 73 8.407457 TCTTCAATCATGATAGTACAACGAAC 57.593 34.615 9.04 0.00 34.96 3.95
73 74 9.034544 CATCTTCAATCATGATAGTACAACGAA 57.965 33.333 9.04 2.03 34.96 3.85
74 75 8.413229 TCATCTTCAATCATGATAGTACAACGA 58.587 33.333 9.04 0.00 34.96 3.85
75 76 8.579682 TCATCTTCAATCATGATAGTACAACG 57.420 34.615 9.04 0.00 34.96 4.10
128 129 5.644206 TGTAGCATACGCCATAAGACAAAAA 59.356 36.000 0.00 0.00 46.99 1.94
129 130 5.179533 TGTAGCATACGCCATAAGACAAAA 58.820 37.500 0.00 0.00 46.99 2.44
130 131 4.760878 TGTAGCATACGCCATAAGACAAA 58.239 39.130 0.00 0.00 46.99 2.83
131 132 4.394439 TGTAGCATACGCCATAAGACAA 57.606 40.909 0.00 0.00 46.99 3.18
132 133 4.600692 ATGTAGCATACGCCATAAGACA 57.399 40.909 0.00 0.00 46.99 3.41
133 134 5.710984 ACTATGTAGCATACGCCATAAGAC 58.289 41.667 0.00 0.00 46.99 3.01
134 135 5.977489 ACTATGTAGCATACGCCATAAGA 57.023 39.130 0.00 0.00 46.99 2.10
135 136 6.617879 TGTACTATGTAGCATACGCCATAAG 58.382 40.000 0.00 0.00 46.99 1.73
136 137 6.578163 TGTACTATGTAGCATACGCCATAA 57.422 37.500 0.00 0.00 46.99 1.90
137 138 6.578163 TTGTACTATGTAGCATACGCCATA 57.422 37.500 0.00 0.00 46.99 2.74
138 139 5.462530 TTGTACTATGTAGCATACGCCAT 57.537 39.130 0.00 0.00 46.99 4.40
139 140 4.922471 TTGTACTATGTAGCATACGCCA 57.078 40.909 0.00 0.00 46.99 5.69
140 141 4.863131 GGATTGTACTATGTAGCATACGCC 59.137 45.833 0.00 0.00 46.99 5.68
141 142 4.863131 GGGATTGTACTATGTAGCATACGC 59.137 45.833 0.00 0.00 46.99 4.42
142 143 6.020971 TGGGATTGTACTATGTAGCATACG 57.979 41.667 0.00 0.00 46.99 3.06
143 144 6.313905 GCATGGGATTGTACTATGTAGCATAC 59.686 42.308 0.00 0.00 43.42 2.39
144 145 6.406370 GCATGGGATTGTACTATGTAGCATA 58.594 40.000 0.00 0.00 0.00 3.14
145 146 5.248640 GCATGGGATTGTACTATGTAGCAT 58.751 41.667 0.00 0.00 0.00 3.79
146 147 4.504864 GGCATGGGATTGTACTATGTAGCA 60.505 45.833 0.00 0.00 0.00 3.49
147 148 4.003648 GGCATGGGATTGTACTATGTAGC 58.996 47.826 0.00 0.00 0.00 3.58
148 149 4.021456 TCGGCATGGGATTGTACTATGTAG 60.021 45.833 0.00 0.00 0.00 2.74
149 150 3.898741 TCGGCATGGGATTGTACTATGTA 59.101 43.478 0.00 0.00 0.00 2.29
150 151 2.703536 TCGGCATGGGATTGTACTATGT 59.296 45.455 0.00 0.00 0.00 2.29
151 152 3.244215 ACTCGGCATGGGATTGTACTATG 60.244 47.826 0.00 0.00 0.00 2.23
152 153 2.972713 ACTCGGCATGGGATTGTACTAT 59.027 45.455 0.00 0.00 0.00 2.12
153 154 2.394632 ACTCGGCATGGGATTGTACTA 58.605 47.619 0.00 0.00 0.00 1.82
154 155 1.204146 ACTCGGCATGGGATTGTACT 58.796 50.000 0.00 0.00 0.00 2.73
155 156 2.038387 AACTCGGCATGGGATTGTAC 57.962 50.000 0.00 0.00 0.00 2.90
156 157 2.482316 CGTAACTCGGCATGGGATTGTA 60.482 50.000 0.00 0.00 35.71 2.41
157 158 1.742411 CGTAACTCGGCATGGGATTGT 60.742 52.381 0.00 0.00 35.71 2.71
158 159 0.937304 CGTAACTCGGCATGGGATTG 59.063 55.000 0.00 0.00 35.71 2.67
159 160 0.814010 GCGTAACTCGGCATGGGATT 60.814 55.000 0.00 0.00 40.26 3.01
160 161 1.227556 GCGTAACTCGGCATGGGAT 60.228 57.895 0.00 0.00 40.26 3.85
161 162 2.185867 GCGTAACTCGGCATGGGA 59.814 61.111 0.00 0.00 40.26 4.37
162 163 3.261951 CGCGTAACTCGGCATGGG 61.262 66.667 0.00 0.00 40.26 4.00
163 164 1.752501 CTTCGCGTAACTCGGCATGG 61.753 60.000 5.77 0.00 40.26 3.66
164 165 1.631072 CTTCGCGTAACTCGGCATG 59.369 57.895 5.77 0.00 40.26 4.06
165 166 1.518572 CCTTCGCGTAACTCGGCAT 60.519 57.895 5.77 0.00 40.26 4.40
166 167 2.126228 CCTTCGCGTAACTCGGCA 60.126 61.111 5.77 0.00 40.26 5.69
167 168 1.287041 AAACCTTCGCGTAACTCGGC 61.287 55.000 5.77 0.00 40.26 5.54
168 169 0.712222 GAAACCTTCGCGTAACTCGG 59.288 55.000 5.77 0.00 40.26 4.63
169 170 1.123756 GTGAAACCTTCGCGTAACTCG 59.876 52.381 5.77 0.00 43.12 4.18
170 171 2.850441 GTGAAACCTTCGCGTAACTC 57.150 50.000 5.77 0.00 0.00 3.01
183 184 1.282157 AGTGGGGCAGATAGGTGAAAC 59.718 52.381 0.00 0.00 0.00 2.78
184 185 1.668826 AGTGGGGCAGATAGGTGAAA 58.331 50.000 0.00 0.00 0.00 2.69
185 186 1.281867 CAAGTGGGGCAGATAGGTGAA 59.718 52.381 0.00 0.00 0.00 3.18
186 187 0.911769 CAAGTGGGGCAGATAGGTGA 59.088 55.000 0.00 0.00 0.00 4.02
187 188 0.749454 GCAAGTGGGGCAGATAGGTG 60.749 60.000 0.00 0.00 0.00 4.00
188 189 0.916358 AGCAAGTGGGGCAGATAGGT 60.916 55.000 0.00 0.00 0.00 3.08
189 190 0.179034 GAGCAAGTGGGGCAGATAGG 60.179 60.000 0.00 0.00 0.00 2.57
190 191 0.531532 CGAGCAAGTGGGGCAGATAG 60.532 60.000 0.00 0.00 0.00 2.08
191 192 1.522092 CGAGCAAGTGGGGCAGATA 59.478 57.895 0.00 0.00 0.00 1.98
192 193 2.270205 CGAGCAAGTGGGGCAGAT 59.730 61.111 0.00 0.00 0.00 2.90
193 194 4.020617 CCGAGCAAGTGGGGCAGA 62.021 66.667 0.00 0.00 0.00 4.26
194 195 3.965539 CTCCGAGCAAGTGGGGCAG 62.966 68.421 0.00 0.00 0.00 4.85
195 196 4.020617 CTCCGAGCAAGTGGGGCA 62.021 66.667 0.00 0.00 0.00 5.36
196 197 4.785453 CCTCCGAGCAAGTGGGGC 62.785 72.222 0.00 0.00 0.00 5.80
197 198 4.101448 CCCTCCGAGCAAGTGGGG 62.101 72.222 0.00 0.00 34.46 4.96
198 199 2.411765 AAACCCTCCGAGCAAGTGGG 62.412 60.000 6.31 6.31 43.26 4.61
199 200 0.323629 TAAACCCTCCGAGCAAGTGG 59.676 55.000 0.00 0.00 0.00 4.00
200 201 1.676014 CCTAAACCCTCCGAGCAAGTG 60.676 57.143 0.00 0.00 0.00 3.16
201 202 0.613777 CCTAAACCCTCCGAGCAAGT 59.386 55.000 0.00 0.00 0.00 3.16
202 203 0.744771 GCCTAAACCCTCCGAGCAAG 60.745 60.000 0.00 0.00 0.00 4.01
203 204 1.298667 GCCTAAACCCTCCGAGCAA 59.701 57.895 0.00 0.00 0.00 3.91
204 205 2.666098 GGCCTAAACCCTCCGAGCA 61.666 63.158 0.00 0.00 0.00 4.26
205 206 2.189784 GGCCTAAACCCTCCGAGC 59.810 66.667 0.00 0.00 0.00 5.03
213 214 1.616865 GAACCAAACAGGGCCTAAACC 59.383 52.381 5.28 0.00 43.89 3.27
214 215 2.312390 TGAACCAAACAGGGCCTAAAC 58.688 47.619 5.28 0.00 43.89 2.01
215 216 2.757894 TGAACCAAACAGGGCCTAAA 57.242 45.000 5.28 0.00 43.89 1.85
216 217 2.990740 ATGAACCAAACAGGGCCTAA 57.009 45.000 5.28 0.00 43.89 2.69
217 218 3.332485 ACTTATGAACCAAACAGGGCCTA 59.668 43.478 5.28 0.00 43.89 3.93
218 219 2.110011 ACTTATGAACCAAACAGGGCCT 59.890 45.455 0.00 0.00 43.89 5.19
219 220 2.492088 GACTTATGAACCAAACAGGGCC 59.508 50.000 0.00 0.00 43.89 5.80
220 221 2.492088 GGACTTATGAACCAAACAGGGC 59.508 50.000 0.00 0.00 43.89 5.19
221 222 3.758554 CAGGACTTATGAACCAAACAGGG 59.241 47.826 0.00 0.00 43.89 4.45
222 223 3.758554 CCAGGACTTATGAACCAAACAGG 59.241 47.826 0.00 0.00 45.67 4.00
223 224 3.758554 CCCAGGACTTATGAACCAAACAG 59.241 47.826 0.00 0.00 0.00 3.16
224 225 3.396276 TCCCAGGACTTATGAACCAAACA 59.604 43.478 0.00 0.00 0.00 2.83
225 226 3.756963 GTCCCAGGACTTATGAACCAAAC 59.243 47.826 9.67 0.00 41.57 2.93
226 227 4.028993 GTCCCAGGACTTATGAACCAAA 57.971 45.455 9.67 0.00 41.57 3.28
227 228 3.713826 GTCCCAGGACTTATGAACCAA 57.286 47.619 9.67 0.00 41.57 3.67
250 251 7.757611 TGGGACTTATAAGTTGGGACTAAAAA 58.242 34.615 18.96 0.00 39.88 1.94
251 252 7.332433 TGGGACTTATAAGTTGGGACTAAAA 57.668 36.000 18.96 0.00 39.88 1.52
252 253 6.956102 TGGGACTTATAAGTTGGGACTAAA 57.044 37.500 18.96 0.00 39.88 1.85
253 254 6.502863 ACTTGGGACTTATAAGTTGGGACTAA 59.497 38.462 18.96 10.32 39.88 2.24
254 255 6.027482 ACTTGGGACTTATAAGTTGGGACTA 58.973 40.000 18.96 3.96 39.88 2.59
255 256 4.850386 ACTTGGGACTTATAAGTTGGGACT 59.150 41.667 18.96 0.00 39.88 3.85
256 257 5.175388 ACTTGGGACTTATAAGTTGGGAC 57.825 43.478 18.96 6.19 39.88 4.46
257 258 4.226620 GGACTTGGGACTTATAAGTTGGGA 59.773 45.833 18.96 6.15 39.88 4.37
258 259 4.524053 GGACTTGGGACTTATAAGTTGGG 58.476 47.826 18.96 10.37 39.88 4.12
259 260 4.227527 AGGGACTTGGGACTTATAAGTTGG 59.772 45.833 18.96 10.07 34.84 3.77
260 261 5.437191 AGGGACTTGGGACTTATAAGTTG 57.563 43.478 18.96 9.81 34.84 3.16
261 262 7.578458 TTTAGGGACTTGGGACTTATAAGTT 57.422 36.000 18.96 2.29 38.78 2.66
262 263 7.578458 TTTTAGGGACTTGGGACTTATAAGT 57.422 36.000 18.05 18.05 40.66 2.24
263 264 8.107729 ACTTTTTAGGGACTTGGGACTTATAAG 58.892 37.037 11.05 11.05 41.75 1.73
264 265 7.992295 ACTTTTTAGGGACTTGGGACTTATAA 58.008 34.615 0.00 0.00 41.75 0.98
265 266 7.311486 GGACTTTTTAGGGACTTGGGACTTATA 60.311 40.741 0.00 0.00 41.75 0.98
266 267 6.464530 ACTTTTTAGGGACTTGGGACTTAT 57.535 37.500 0.00 0.00 41.75 1.73
267 268 5.221986 GGACTTTTTAGGGACTTGGGACTTA 60.222 44.000 0.00 0.00 41.75 2.24
268 269 4.447325 GGACTTTTTAGGGACTTGGGACTT 60.447 45.833 0.00 0.00 41.75 3.01
269 270 3.074094 GGACTTTTTAGGGACTTGGGACT 59.926 47.826 0.00 0.00 41.75 3.85
270 271 3.418995 GGACTTTTTAGGGACTTGGGAC 58.581 50.000 0.00 0.00 41.75 4.46
271 272 2.377531 GGGACTTTTTAGGGACTTGGGA 59.622 50.000 0.00 0.00 41.75 4.37
272 273 2.556782 GGGGACTTTTTAGGGACTTGGG 60.557 54.545 0.00 0.00 41.75 4.12
273 274 2.109304 TGGGGACTTTTTAGGGACTTGG 59.891 50.000 0.00 0.00 41.75 3.61
274 275 3.154710 GTGGGGACTTTTTAGGGACTTG 58.845 50.000 0.00 0.00 41.75 3.16
275 276 2.109480 GGTGGGGACTTTTTAGGGACTT 59.891 50.000 0.00 0.00 41.75 3.01
276 277 1.709115 GGTGGGGACTTTTTAGGGACT 59.291 52.381 0.00 0.00 46.37 3.85
277 278 1.709115 AGGTGGGGACTTTTTAGGGAC 59.291 52.381 0.00 0.00 0.00 4.46
278 279 2.143231 AGGTGGGGACTTTTTAGGGA 57.857 50.000 0.00 0.00 0.00 4.20
279 280 4.603094 AATAGGTGGGGACTTTTTAGGG 57.397 45.455 0.00 0.00 0.00 3.53
280 281 4.709886 CCAAATAGGTGGGGACTTTTTAGG 59.290 45.833 0.00 0.00 34.77 2.69
281 282 5.914898 CCAAATAGGTGGGGACTTTTTAG 57.085 43.478 0.00 0.00 34.77 1.85
295 296 3.739401 AAGTCCCAGGAACCAAATAGG 57.261 47.619 0.00 0.00 45.67 2.57
296 297 5.566469 TGTTAAGTCCCAGGAACCAAATAG 58.434 41.667 0.00 0.00 0.00 1.73
297 298 5.586155 TGTTAAGTCCCAGGAACCAAATA 57.414 39.130 0.00 0.00 0.00 1.40
298 299 4.463050 TGTTAAGTCCCAGGAACCAAAT 57.537 40.909 0.00 0.00 0.00 2.32
299 300 3.955524 TGTTAAGTCCCAGGAACCAAA 57.044 42.857 0.00 0.00 0.00 3.28
300 301 3.499563 CCATGTTAAGTCCCAGGAACCAA 60.500 47.826 0.00 0.00 0.00 3.67
301 302 2.041081 CCATGTTAAGTCCCAGGAACCA 59.959 50.000 0.00 0.00 0.00 3.67
302 303 2.307686 TCCATGTTAAGTCCCAGGAACC 59.692 50.000 0.00 0.00 0.00 3.62
303 304 3.344515 GTCCATGTTAAGTCCCAGGAAC 58.655 50.000 0.00 0.00 0.00 3.62
304 305 2.307686 GGTCCATGTTAAGTCCCAGGAA 59.692 50.000 0.00 0.00 0.00 3.36
305 306 1.913419 GGTCCATGTTAAGTCCCAGGA 59.087 52.381 0.00 0.00 0.00 3.86
306 307 1.633432 TGGTCCATGTTAAGTCCCAGG 59.367 52.381 0.00 0.00 0.00 4.45
307 308 3.433306 TTGGTCCATGTTAAGTCCCAG 57.567 47.619 0.00 0.00 0.00 4.45
308 309 3.885976 TTTGGTCCATGTTAAGTCCCA 57.114 42.857 0.00 0.00 0.00 4.37
309 310 4.217767 GTCTTTTGGTCCATGTTAAGTCCC 59.782 45.833 0.00 0.00 0.00 4.46
310 311 4.217767 GGTCTTTTGGTCCATGTTAAGTCC 59.782 45.833 0.00 0.00 0.00 3.85
311 312 4.825085 TGGTCTTTTGGTCCATGTTAAGTC 59.175 41.667 0.00 0.00 0.00 3.01
312 313 4.798882 TGGTCTTTTGGTCCATGTTAAGT 58.201 39.130 0.00 0.00 0.00 2.24
313 314 5.982890 ATGGTCTTTTGGTCCATGTTAAG 57.017 39.130 0.00 0.00 40.00 1.85
314 315 8.962679 GTAATATGGTCTTTTGGTCCATGTTAA 58.037 33.333 11.88 0.00 42.41 2.01
315 316 8.110271 TGTAATATGGTCTTTTGGTCCATGTTA 58.890 33.333 0.00 7.19 41.11 2.41
316 317 6.951198 TGTAATATGGTCTTTTGGTCCATGTT 59.049 34.615 9.52 9.52 42.54 2.71
317 318 6.489603 TGTAATATGGTCTTTTGGTCCATGT 58.510 36.000 0.00 0.00 41.34 3.21
318 319 7.122650 AGTTGTAATATGGTCTTTTGGTCCATG 59.877 37.037 0.00 0.00 41.34 3.66
319 320 7.182060 AGTTGTAATATGGTCTTTTGGTCCAT 58.818 34.615 0.00 0.00 43.30 3.41
320 321 6.548321 AGTTGTAATATGGTCTTTTGGTCCA 58.452 36.000 0.00 0.00 35.64 4.02
321 322 8.747538 ATAGTTGTAATATGGTCTTTTGGTCC 57.252 34.615 0.00 0.00 0.00 4.46
328 329 9.448587 AGGGACTTATAGTTGTAATATGGTCTT 57.551 33.333 0.00 0.00 27.25 3.01
337 338 9.372189 GGGACTTATAGGGACTTATAGTTGTAA 57.628 37.037 0.00 0.00 41.75 2.41
338 339 8.740512 AGGGACTTATAGGGACTTATAGTTGTA 58.259 37.037 0.00 0.00 34.75 2.41
339 340 7.602868 AGGGACTTATAGGGACTTATAGTTGT 58.397 38.462 0.00 0.00 34.75 3.32
340 341 7.178805 GGAGGGACTTATAGGGACTTATAGTTG 59.821 44.444 0.00 0.00 41.55 3.16
341 342 7.076566 AGGAGGGACTTATAGGGACTTATAGTT 59.923 40.741 0.00 0.00 41.55 2.24
342 343 6.571180 AGGAGGGACTTATAGGGACTTATAGT 59.429 42.308 0.00 0.00 41.55 2.12
343 344 7.046891 AGGAGGGACTTATAGGGACTTATAG 57.953 44.000 0.00 0.00 41.55 1.31
344 345 7.075915 TCAAGGAGGGACTTATAGGGACTTATA 59.924 40.741 0.00 0.00 41.55 0.98
345 346 5.970692 AGGAGGGACTTATAGGGACTTAT 57.029 43.478 0.00 0.00 41.55 1.73
346 347 5.197189 TCAAGGAGGGACTTATAGGGACTTA 59.803 44.000 0.00 0.00 41.55 2.24
347 348 4.015541 TCAAGGAGGGACTTATAGGGACTT 60.016 45.833 0.00 0.00 41.55 3.01
348 349 3.536434 TCAAGGAGGGACTTATAGGGACT 59.464 47.826 0.00 0.00 41.55 3.85
349 350 3.898741 CTCAAGGAGGGACTTATAGGGAC 59.101 52.174 0.00 0.00 41.55 4.46
350 351 3.797845 TCTCAAGGAGGGACTTATAGGGA 59.202 47.826 0.00 0.00 41.55 4.20
351 352 4.156477 CTCTCAAGGAGGGACTTATAGGG 58.844 52.174 0.00 0.00 41.55 3.53
352 353 4.810345 ACTCTCAAGGAGGGACTTATAGG 58.190 47.826 0.00 0.00 45.83 2.57
353 354 5.701224 AGACTCTCAAGGAGGGACTTATAG 58.299 45.833 0.00 0.00 45.83 1.31
354 355 5.735733 AGACTCTCAAGGAGGGACTTATA 57.264 43.478 0.00 0.00 45.83 0.98
355 356 4.618378 AGACTCTCAAGGAGGGACTTAT 57.382 45.455 0.00 0.00 45.83 1.73
356 357 4.405756 AAGACTCTCAAGGAGGGACTTA 57.594 45.455 8.68 0.00 41.64 2.24
357 358 3.268034 AAGACTCTCAAGGAGGGACTT 57.732 47.619 5.25 5.25 45.83 3.01
358 359 4.618378 ATAAGACTCTCAAGGAGGGACT 57.382 45.455 0.00 0.00 45.83 3.85
359 360 5.187967 TGAAATAAGACTCTCAAGGAGGGAC 59.812 44.000 0.00 0.00 45.83 4.46
360 361 5.342017 TGAAATAAGACTCTCAAGGAGGGA 58.658 41.667 0.00 0.00 45.83 4.20
361 362 5.683876 TGAAATAAGACTCTCAAGGAGGG 57.316 43.478 0.00 0.00 45.83 4.30
376 377 5.960811 TGGGCATTTGGGACTTATGAAATAA 59.039 36.000 0.00 0.00 36.20 1.40
377 378 5.362430 GTGGGCATTTGGGACTTATGAAATA 59.638 40.000 0.00 0.00 0.00 1.40
378 379 4.162131 GTGGGCATTTGGGACTTATGAAAT 59.838 41.667 0.00 0.00 0.00 2.17
379 380 3.513515 GTGGGCATTTGGGACTTATGAAA 59.486 43.478 0.00 0.00 0.00 2.69
380 381 3.096092 GTGGGCATTTGGGACTTATGAA 58.904 45.455 0.00 0.00 0.00 2.57
381 382 2.311542 AGTGGGCATTTGGGACTTATGA 59.688 45.455 0.00 0.00 0.00 2.15
382 383 2.738743 AGTGGGCATTTGGGACTTATG 58.261 47.619 0.00 0.00 0.00 1.90
383 384 3.473113 AAGTGGGCATTTGGGACTTAT 57.527 42.857 0.00 0.00 0.00 1.73
384 385 2.990740 AAGTGGGCATTTGGGACTTA 57.009 45.000 0.00 0.00 0.00 2.24
385 386 2.101640 AAAGTGGGCATTTGGGACTT 57.898 45.000 0.00 0.00 0.00 3.01
386 387 2.990740 TAAAGTGGGCATTTGGGACT 57.009 45.000 0.00 0.00 0.00 3.85
387 388 2.897326 ACTTAAAGTGGGCATTTGGGAC 59.103 45.455 0.00 0.00 0.00 4.46
388 389 3.161866 GACTTAAAGTGGGCATTTGGGA 58.838 45.455 0.00 0.00 0.00 4.37
389 390 2.233676 GGACTTAAAGTGGGCATTTGGG 59.766 50.000 0.00 0.00 0.00 4.12
390 391 2.233676 GGGACTTAAAGTGGGCATTTGG 59.766 50.000 0.00 0.00 0.00 3.28
391 392 3.165071 AGGGACTTAAAGTGGGCATTTG 58.835 45.455 0.00 0.00 27.25 2.32
392 393 3.542969 AGGGACTTAAAGTGGGCATTT 57.457 42.857 0.00 0.00 27.25 2.32
393 394 4.881157 ATAGGGACTTAAAGTGGGCATT 57.119 40.909 0.00 0.00 41.75 3.56
394 395 5.432060 ACTTATAGGGACTTAAAGTGGGCAT 59.568 40.000 0.00 0.00 39.58 4.40
395 396 4.786454 ACTTATAGGGACTTAAAGTGGGCA 59.214 41.667 0.00 0.00 39.58 5.36
396 397 5.366460 GACTTATAGGGACTTAAAGTGGGC 58.634 45.833 0.00 0.00 40.60 5.36
397 398 5.163227 GGGACTTATAGGGACTTAAAGTGGG 60.163 48.000 0.00 0.00 40.60 4.61
398 399 5.666265 AGGGACTTATAGGGACTTAAAGTGG 59.334 44.000 0.00 0.00 40.60 4.00
399 400 6.183360 GGAGGGACTTATAGGGACTTAAAGTG 60.183 46.154 0.00 0.00 40.60 3.16
400 401 5.904169 GGAGGGACTTATAGGGACTTAAAGT 59.096 44.000 0.00 0.00 42.31 2.66
401 402 6.042208 CAGGAGGGACTTATAGGGACTTAAAG 59.958 46.154 0.00 0.00 41.55 1.85
402 403 5.903589 CAGGAGGGACTTATAGGGACTTAAA 59.096 44.000 0.00 0.00 41.55 1.52
403 404 5.042827 ACAGGAGGGACTTATAGGGACTTAA 60.043 44.000 0.00 0.00 41.55 1.85
404 405 4.485021 ACAGGAGGGACTTATAGGGACTTA 59.515 45.833 0.00 0.00 41.55 2.24
405 406 3.275228 ACAGGAGGGACTTATAGGGACTT 59.725 47.826 0.00 0.00 41.55 3.01
406 407 2.866454 ACAGGAGGGACTTATAGGGACT 59.134 50.000 0.00 0.00 41.55 3.85
407 408 3.331718 ACAGGAGGGACTTATAGGGAC 57.668 52.381 0.00 0.00 41.55 4.46
408 409 4.037927 CAAACAGGAGGGACTTATAGGGA 58.962 47.826 0.00 0.00 41.55 4.20
409 410 3.136626 CCAAACAGGAGGGACTTATAGGG 59.863 52.174 0.00 0.00 41.55 3.53
410 411 3.780850 ACCAAACAGGAGGGACTTATAGG 59.219 47.826 0.00 0.00 41.55 2.57
411 412 5.437191 AACCAAACAGGAGGGACTTATAG 57.563 43.478 0.00 0.00 41.55 1.31
412 413 5.853572 AAACCAAACAGGAGGGACTTATA 57.146 39.130 0.00 0.00 41.55 0.98
413 414 4.741928 AAACCAAACAGGAGGGACTTAT 57.258 40.909 0.00 0.00 41.55 1.73
414 415 4.909088 TCTAAACCAAACAGGAGGGACTTA 59.091 41.667 0.00 0.00 41.55 2.24
415 416 3.720002 TCTAAACCAAACAGGAGGGACTT 59.280 43.478 0.00 0.00 41.55 3.01
417 418 3.782656 TCTAAACCAAACAGGAGGGAC 57.217 47.619 0.00 0.00 41.22 4.46
418 419 3.010138 CCATCTAAACCAAACAGGAGGGA 59.990 47.826 0.00 0.00 41.22 4.20
419 420 3.356290 CCATCTAAACCAAACAGGAGGG 58.644 50.000 0.00 0.00 41.22 4.30
420 421 3.010138 TCCCATCTAAACCAAACAGGAGG 59.990 47.826 0.00 0.00 41.22 4.30
421 422 4.010349 GTCCCATCTAAACCAAACAGGAG 58.990 47.826 0.00 0.00 41.22 3.69
422 423 3.655777 AGTCCCATCTAAACCAAACAGGA 59.344 43.478 0.00 0.00 41.22 3.86
423 424 4.034285 AGTCCCATCTAAACCAAACAGG 57.966 45.455 0.00 0.00 45.67 4.00
424 425 7.309194 CCTTTAAGTCCCATCTAAACCAAACAG 60.309 40.741 0.00 0.00 0.00 3.16
425 426 6.492087 CCTTTAAGTCCCATCTAAACCAAACA 59.508 38.462 0.00 0.00 0.00 2.83
426 427 6.071560 CCCTTTAAGTCCCATCTAAACCAAAC 60.072 42.308 0.00 0.00 0.00 2.93
427 428 6.014012 CCCTTTAAGTCCCATCTAAACCAAA 58.986 40.000 0.00 0.00 0.00 3.28
428 429 5.313772 TCCCTTTAAGTCCCATCTAAACCAA 59.686 40.000 0.00 0.00 0.00 3.67
429 430 4.853276 TCCCTTTAAGTCCCATCTAAACCA 59.147 41.667 0.00 0.00 0.00 3.67
430 431 5.045066 AGTCCCTTTAAGTCCCATCTAAACC 60.045 44.000 0.00 0.00 0.00 3.27
431 432 6.063496 AGTCCCTTTAAGTCCCATCTAAAC 57.937 41.667 0.00 0.00 0.00 2.01
432 433 6.713731 AAGTCCCTTTAAGTCCCATCTAAA 57.286 37.500 0.00 0.00 0.00 1.85
433 434 6.713731 AAAGTCCCTTTAAGTCCCATCTAA 57.286 37.500 0.00 0.00 31.35 2.10
434 435 6.713731 AAAAGTCCCTTTAAGTCCCATCTA 57.286 37.500 0.00 0.00 31.99 1.98
435 436 5.600669 AAAAGTCCCTTTAAGTCCCATCT 57.399 39.130 0.00 0.00 31.99 2.90
455 456 7.666804 GGACTTATTGGTGTAGGGACTTAAAAA 59.333 37.037 0.00 0.00 41.75 1.94
456 457 7.170277 GGACTTATTGGTGTAGGGACTTAAAA 58.830 38.462 0.00 0.00 41.75 1.52
457 458 6.296605 GGGACTTATTGGTGTAGGGACTTAAA 60.297 42.308 0.00 0.00 41.75 1.52
458 459 5.190330 GGGACTTATTGGTGTAGGGACTTAA 59.810 44.000 0.00 0.00 41.75 1.85
459 460 4.718276 GGGACTTATTGGTGTAGGGACTTA 59.282 45.833 0.00 0.00 41.75 2.24
460 461 3.522343 GGGACTTATTGGTGTAGGGACTT 59.478 47.826 0.00 0.00 41.75 3.01
461 462 3.113043 GGGACTTATTGGTGTAGGGACT 58.887 50.000 0.00 0.00 46.37 3.85
462 463 3.113043 AGGGACTTATTGGTGTAGGGAC 58.887 50.000 0.00 0.00 27.25 4.46
463 464 3.112263 CAGGGACTTATTGGTGTAGGGA 58.888 50.000 0.00 0.00 34.60 4.20
464 465 2.844348 ACAGGGACTTATTGGTGTAGGG 59.156 50.000 0.00 0.00 34.60 3.53
465 466 5.425630 GTTACAGGGACTTATTGGTGTAGG 58.574 45.833 0.00 0.00 34.60 3.18
466 467 5.046159 TGGTTACAGGGACTTATTGGTGTAG 60.046 44.000 0.00 0.00 34.60 2.74
467 468 4.845225 TGGTTACAGGGACTTATTGGTGTA 59.155 41.667 0.00 0.00 34.60 2.90
468 469 3.653836 TGGTTACAGGGACTTATTGGTGT 59.346 43.478 0.00 0.00 34.60 4.16
469 470 4.295141 TGGTTACAGGGACTTATTGGTG 57.705 45.455 0.00 0.00 34.60 4.17
470 471 5.074804 GTTTGGTTACAGGGACTTATTGGT 58.925 41.667 0.00 0.00 34.60 3.67
471 472 5.048294 GTGTTTGGTTACAGGGACTTATTGG 60.048 44.000 0.00 0.00 34.60 3.16
472 473 5.048294 GGTGTTTGGTTACAGGGACTTATTG 60.048 44.000 0.00 0.00 34.60 1.90
473 474 5.074804 GGTGTTTGGTTACAGGGACTTATT 58.925 41.667 0.00 0.00 34.60 1.40
474 475 4.352893 AGGTGTTTGGTTACAGGGACTTAT 59.647 41.667 0.00 0.00 34.60 1.73
475 476 3.717913 AGGTGTTTGGTTACAGGGACTTA 59.282 43.478 0.00 0.00 34.60 2.24
476 477 2.512476 AGGTGTTTGGTTACAGGGACTT 59.488 45.455 0.00 0.00 34.60 3.01
477 478 2.132686 AGGTGTTTGGTTACAGGGACT 58.867 47.619 0.00 0.00 43.88 3.85
478 479 2.651382 AGGTGTTTGGTTACAGGGAC 57.349 50.000 0.00 0.00 0.00 4.46
479 480 2.781174 AGAAGGTGTTTGGTTACAGGGA 59.219 45.455 0.00 0.00 0.00 4.20
480 481 3.223674 AGAAGGTGTTTGGTTACAGGG 57.776 47.619 0.00 0.00 0.00 4.45
481 482 5.617252 TCTAAGAAGGTGTTTGGTTACAGG 58.383 41.667 0.00 0.00 0.00 4.00
482 483 6.990349 TCTTCTAAGAAGGTGTTTGGTTACAG 59.010 38.462 0.00 0.00 30.73 2.74
483 484 6.891388 TCTTCTAAGAAGGTGTTTGGTTACA 58.109 36.000 0.00 0.00 30.73 2.41
484 485 7.981102 ATCTTCTAAGAAGGTGTTTGGTTAC 57.019 36.000 1.18 0.00 38.77 2.50
485 486 8.653191 TGTATCTTCTAAGAAGGTGTTTGGTTA 58.347 33.333 1.18 0.00 38.77 2.85
486 487 7.514721 TGTATCTTCTAAGAAGGTGTTTGGTT 58.485 34.615 1.18 0.00 38.77 3.67
487 488 7.074653 TGTATCTTCTAAGAAGGTGTTTGGT 57.925 36.000 1.18 0.00 38.77 3.67
488 489 7.979444 TTGTATCTTCTAAGAAGGTGTTTGG 57.021 36.000 1.18 0.00 38.77 3.28
489 490 9.665264 GTTTTGTATCTTCTAAGAAGGTGTTTG 57.335 33.333 1.18 0.00 38.77 2.93
490 491 9.403583 TGTTTTGTATCTTCTAAGAAGGTGTTT 57.596 29.630 1.18 0.00 38.77 2.83
491 492 8.974060 TGTTTTGTATCTTCTAAGAAGGTGTT 57.026 30.769 1.18 0.00 38.77 3.32
650 659 6.427441 TGTGCTAACCCAATATCCACAAATA 58.573 36.000 0.00 0.00 0.00 1.40
670 679 4.581493 CAATCATCTCACGTACATTGTGC 58.419 43.478 0.00 0.00 37.26 4.57
763 778 4.079327 AGCAAGAATCCCCATTGAGATCTT 60.079 41.667 0.00 0.00 0.00 2.40
863 878 7.188157 AGCGTCAACATTAAGTTTAACGAAAA 58.812 30.769 17.16 0.00 43.91 2.29
885 900 5.936054 AGAAGAACATGATCAAAAGAAGCG 58.064 37.500 0.00 0.00 0.00 4.68
934 949 0.468226 AACCTGCCTTTGTCGTCTCA 59.532 50.000 0.00 0.00 0.00 3.27
1070 1086 8.454106 CAATCACCTCCATATTATCCGAATTTC 58.546 37.037 0.00 0.00 0.00 2.17
1161 1177 6.408858 ACAGTAACGAAATCACAAGCATAG 57.591 37.500 0.00 0.00 0.00 2.23
1299 1316 7.400599 AAGTAGTACATCGTTTGTGAGGATA 57.599 36.000 2.52 0.00 39.48 2.59
1472 1494 6.707290 AGTGCACTCTTATTGTTGGTATACA 58.293 36.000 15.25 0.00 0.00 2.29
1475 1497 6.476378 AGAAGTGCACTCTTATTGTTGGTAT 58.524 36.000 21.95 0.00 0.00 2.73
1479 1501 6.854892 CAGAAAGAAGTGCACTCTTATTGTTG 59.145 38.462 21.95 13.68 30.79 3.33
1480 1502 6.767902 TCAGAAAGAAGTGCACTCTTATTGTT 59.232 34.615 21.95 5.90 30.79 2.83
1527 1550 7.118101 GTGCATTGAAATGTTCCATTGTGTATT 59.882 33.333 5.02 0.00 38.65 1.89
1545 1568 4.362932 TTCTTGTTTCAACGTGCATTGA 57.637 36.364 0.00 0.00 36.80 2.57
1547 1570 5.866633 TCTTTTTCTTGTTTCAACGTGCATT 59.133 32.000 0.00 0.00 0.00 3.56
1548 1571 5.406649 TCTTTTTCTTGTTTCAACGTGCAT 58.593 33.333 0.00 0.00 0.00 3.96
1550 1573 5.755330 TTCTTTTTCTTGTTTCAACGTGC 57.245 34.783 0.00 0.00 0.00 5.34
1553 1576 7.273381 ACACTGATTCTTTTTCTTGTTTCAACG 59.727 33.333 0.00 0.00 0.00 4.10
1569 1592 8.902540 TTGTTTCATAGTGTTACACTGATTCT 57.097 30.769 26.18 3.16 45.01 2.40
1570 1593 8.988934 TCTTGTTTCATAGTGTTACACTGATTC 58.011 33.333 26.18 13.05 45.01 2.52
1573 1596 7.269316 TGTCTTGTTTCATAGTGTTACACTGA 58.731 34.615 26.18 14.79 45.01 3.41
1574 1597 7.477144 TGTCTTGTTTCATAGTGTTACACTG 57.523 36.000 26.18 12.71 45.01 3.66
1576 1599 9.730420 ATTTTGTCTTGTTTCATAGTGTTACAC 57.270 29.630 7.50 7.50 34.10 2.90
1577 1600 9.944663 GATTTTGTCTTGTTTCATAGTGTTACA 57.055 29.630 0.00 0.00 0.00 2.41
1580 1603 7.649306 GCAGATTTTGTCTTGTTTCATAGTGTT 59.351 33.333 0.00 0.00 34.00 3.32
1581 1604 7.141363 GCAGATTTTGTCTTGTTTCATAGTGT 58.859 34.615 0.00 0.00 34.00 3.55
1613 1636 4.217510 TGAGATTCATGCTATTTTGGGGG 58.782 43.478 0.00 0.00 0.00 5.40
1614 1637 5.857471 TTGAGATTCATGCTATTTTGGGG 57.143 39.130 0.00 0.00 0.00 4.96
1615 1638 5.751990 GCTTTGAGATTCATGCTATTTTGGG 59.248 40.000 0.00 0.00 0.00 4.12
1616 1639 6.334989 TGCTTTGAGATTCATGCTATTTTGG 58.665 36.000 0.00 0.00 30.95 3.28
1617 1640 7.462331 CGTTGCTTTGAGATTCATGCTATTTTG 60.462 37.037 0.00 0.00 30.95 2.44
1637 1660 2.292267 GATCCACCATTCATCGTTGCT 58.708 47.619 0.00 0.00 0.00 3.91
1662 1685 2.449464 CATACATGGGGGTATGCCATG 58.551 52.381 1.01 1.01 42.77 3.66
1673 1696 7.227156 AGAAAAGCTATTCTACCATACATGGG 58.773 38.462 12.77 0.00 40.92 4.00
1732 1755 0.107654 GCATGAGGGCTAAGGACGTT 60.108 55.000 0.00 0.00 0.00 3.99
1735 1758 1.149401 GGGCATGAGGGCTAAGGAC 59.851 63.158 0.00 0.00 42.84 3.85
1739 1762 0.704076 AACAAGGGCATGAGGGCTAA 59.296 50.000 0.00 0.00 42.84 3.09
1753 1776 0.607489 CCTCAGGGAGGTGCAACAAG 60.607 60.000 3.64 0.00 44.25 3.16
1764 1787 2.379972 GAAATCTCGTCTCCTCAGGGA 58.620 52.381 0.00 0.00 39.70 4.20
1768 1791 2.534042 AGGGAAATCTCGTCTCCTCA 57.466 50.000 0.00 0.00 0.00 3.86
1787 1810 6.597562 AGTTGTCAATAACAGAACACCCTTA 58.402 36.000 0.00 0.00 39.58 2.69
1794 1818 9.612620 CCAAGATAAAGTTGTCAATAACAGAAC 57.387 33.333 0.00 0.00 39.58 3.01
1802 1826 5.243730 CCACCACCAAGATAAAGTTGTCAAT 59.756 40.000 0.00 0.00 0.00 2.57
1810 1834 3.012518 CAGCTCCACCACCAAGATAAAG 58.987 50.000 0.00 0.00 0.00 1.85
1819 1843 3.249189 TGGACCAGCTCCACCACC 61.249 66.667 0.00 0.00 44.99 4.61
1826 1850 0.895100 TGGCAACATTGGACCAGCTC 60.895 55.000 0.00 0.00 46.17 4.09
1848 1872 2.218603 CAACTAAAGTCAACCCACGCT 58.781 47.619 0.00 0.00 0.00 5.07
1859 1883 5.009811 AGTCGAGCTTGAGTACAACTAAAGT 59.990 40.000 9.75 0.00 38.65 2.66
1877 1901 0.037232 AAGGCTTTCGGGAAGTCGAG 60.037 55.000 0.00 0.00 44.78 4.04
1879 1903 0.320421 TGAAGGCTTTCGGGAAGTCG 60.320 55.000 0.00 0.00 44.78 4.18
1887 1911 3.127533 CGGGGCTGAAGGCTTTCG 61.128 66.667 0.00 0.00 41.46 3.46
1900 1924 0.392595 GGTTAAGCCAGAAGACGGGG 60.393 60.000 0.00 0.00 37.17 5.73
1901 1925 0.613777 AGGTTAAGCCAGAAGACGGG 59.386 55.000 0.00 0.00 40.61 5.28
1902 1926 2.076863 CAAGGTTAAGCCAGAAGACGG 58.923 52.381 0.00 0.00 40.61 4.79
1904 1928 4.579869 TGATCAAGGTTAAGCCAGAAGAC 58.420 43.478 0.00 0.00 40.61 3.01
1905 1929 4.908601 TGATCAAGGTTAAGCCAGAAGA 57.091 40.909 0.00 0.00 40.61 2.87
1906 1930 4.946157 ACATGATCAAGGTTAAGCCAGAAG 59.054 41.667 0.00 0.00 40.61 2.85
1907 1931 4.922206 ACATGATCAAGGTTAAGCCAGAA 58.078 39.130 0.00 0.00 40.61 3.02
1933 1958 1.303643 CACCAAGGTGGAGGCTTCC 60.304 63.158 8.18 8.18 40.96 3.46
1947 1972 3.134623 CCTAAGACATAGTGCATCCACCA 59.865 47.826 0.00 0.00 43.09 4.17
1970 1995 3.131933 CAGAGTGGTAGGAGACATTGAGG 59.868 52.174 0.00 0.00 0.00 3.86
1978 2003 1.350019 TGACGACAGAGTGGTAGGAGA 59.650 52.381 0.00 0.00 0.00 3.71
1990 2015 4.800993 GGACACTATTGAGAATGACGACAG 59.199 45.833 0.00 0.00 0.00 3.51
1996 2021 4.098044 GTCGAGGGACACTATTGAGAATGA 59.902 45.833 0.00 0.00 42.91 2.57
2015 2040 2.829094 TGGGAAGTCCACTTGTCGA 58.171 52.632 0.00 0.00 41.46 4.20
2061 2086 5.242838 TGCGGCCAATATAAATAAGAAAGGG 59.757 40.000 2.24 0.00 0.00 3.95
2063 2088 7.379529 CAGTTGCGGCCAATATAAATAAGAAAG 59.620 37.037 2.24 0.00 32.75 2.62
2066 2091 5.825679 ACAGTTGCGGCCAATATAAATAAGA 59.174 36.000 2.24 0.00 32.75 2.10
2081 2106 1.264288 GTCCTTTCAAGACAGTTGCGG 59.736 52.381 0.00 0.00 34.27 5.69
2092 2117 1.452145 GCAAGCACGGGTCCTTTCAA 61.452 55.000 0.00 0.00 0.00 2.69
2095 2120 0.328258 ATAGCAAGCACGGGTCCTTT 59.672 50.000 0.00 0.00 0.00 3.11
2120 2145 0.946221 GTGTTGCAGTCCGTCCTCTG 60.946 60.000 0.00 0.00 35.12 3.35
2121 2146 1.367840 GTGTTGCAGTCCGTCCTCT 59.632 57.895 0.00 0.00 0.00 3.69
2122 2147 1.668151 GGTGTTGCAGTCCGTCCTC 60.668 63.158 0.00 0.00 0.00 3.71
2123 2148 2.426023 GGTGTTGCAGTCCGTCCT 59.574 61.111 0.00 0.00 0.00 3.85
2124 2149 2.668550 GGGTGTTGCAGTCCGTCC 60.669 66.667 0.00 0.00 0.00 4.79
2125 2150 2.668550 GGGGTGTTGCAGTCCGTC 60.669 66.667 0.00 0.00 0.00 4.79
2126 2151 2.748058 GATGGGGTGTTGCAGTCCGT 62.748 60.000 0.00 0.00 0.00 4.69
2127 2152 2.034066 ATGGGGTGTTGCAGTCCG 59.966 61.111 0.00 0.00 0.00 4.79
2128 2153 0.323725 ATGATGGGGTGTTGCAGTCC 60.324 55.000 0.00 0.00 0.00 3.85
2129 2154 1.098050 GATGATGGGGTGTTGCAGTC 58.902 55.000 0.00 0.00 0.00 3.51
2130 2155 0.323725 GGATGATGGGGTGTTGCAGT 60.324 55.000 0.00 0.00 0.00 4.40
2131 2156 0.323633 TGGATGATGGGGTGTTGCAG 60.324 55.000 0.00 0.00 0.00 4.41
2132 2157 0.611618 GTGGATGATGGGGTGTTGCA 60.612 55.000 0.00 0.00 0.00 4.08
2133 2158 0.611618 TGTGGATGATGGGGTGTTGC 60.612 55.000 0.00 0.00 0.00 4.17
2134 2159 1.466856 CTGTGGATGATGGGGTGTTG 58.533 55.000 0.00 0.00 0.00 3.33
2135 2160 0.323725 GCTGTGGATGATGGGGTGTT 60.324 55.000 0.00 0.00 0.00 3.32
2136 2161 1.304282 GCTGTGGATGATGGGGTGT 59.696 57.895 0.00 0.00 0.00 4.16
2137 2162 1.454479 GGCTGTGGATGATGGGGTG 60.454 63.158 0.00 0.00 0.00 4.61
2138 2163 1.929860 CTGGCTGTGGATGATGGGGT 61.930 60.000 0.00 0.00 0.00 4.95
2139 2164 1.152819 CTGGCTGTGGATGATGGGG 60.153 63.158 0.00 0.00 0.00 4.96
2140 2165 0.839277 TACTGGCTGTGGATGATGGG 59.161 55.000 7.34 0.00 0.00 4.00
2141 2166 1.487976 ACTACTGGCTGTGGATGATGG 59.512 52.381 14.50 0.00 0.00 3.51
2142 2167 2.996249 ACTACTGGCTGTGGATGATG 57.004 50.000 14.50 0.00 0.00 3.07
2143 2168 2.366916 GCTACTACTGGCTGTGGATGAT 59.633 50.000 14.50 0.00 0.00 2.45
2144 2169 1.757118 GCTACTACTGGCTGTGGATGA 59.243 52.381 14.50 0.00 0.00 2.92
2145 2170 1.536922 CGCTACTACTGGCTGTGGATG 60.537 57.143 14.50 7.49 0.00 3.51
2146 2171 0.747255 CGCTACTACTGGCTGTGGAT 59.253 55.000 14.50 2.27 0.00 3.41
2147 2172 0.611062 ACGCTACTACTGGCTGTGGA 60.611 55.000 14.50 0.00 0.00 4.02
2148 2173 0.179134 GACGCTACTACTGGCTGTGG 60.179 60.000 7.34 6.82 0.00 4.17
2149 2174 0.526211 TGACGCTACTACTGGCTGTG 59.474 55.000 7.34 0.35 0.00 3.66
2150 2175 0.811915 CTGACGCTACTACTGGCTGT 59.188 55.000 1.74 1.74 0.00 4.40
2151 2176 0.526524 GCTGACGCTACTACTGGCTG 60.527 60.000 0.00 0.00 0.00 4.85
2152 2177 0.965866 TGCTGACGCTACTACTGGCT 60.966 55.000 0.00 0.00 36.97 4.75
2153 2178 0.103208 ATGCTGACGCTACTACTGGC 59.897 55.000 0.00 0.00 36.97 4.85
2154 2179 2.586258 AATGCTGACGCTACTACTGG 57.414 50.000 0.00 0.00 36.97 4.00
2155 2180 3.046390 GCTAATGCTGACGCTACTACTG 58.954 50.000 0.00 0.00 36.97 2.74
2156 2181 2.688446 TGCTAATGCTGACGCTACTACT 59.312 45.455 0.00 0.00 40.48 2.57
2157 2182 3.079960 TGCTAATGCTGACGCTACTAC 57.920 47.619 0.00 0.00 40.48 2.73
2158 2183 4.612939 CGTATGCTAATGCTGACGCTACTA 60.613 45.833 0.00 0.00 39.57 1.82
2159 2184 2.898729 ATGCTAATGCTGACGCTACT 57.101 45.000 0.00 0.00 40.48 2.57
2160 2185 2.405357 CGTATGCTAATGCTGACGCTAC 59.595 50.000 0.00 0.00 39.57 3.58
2161 2186 2.661594 CGTATGCTAATGCTGACGCTA 58.338 47.619 0.00 0.00 39.57 4.26
2162 2187 1.491670 CGTATGCTAATGCTGACGCT 58.508 50.000 0.00 0.00 39.57 5.07
2181 2206 0.737219 CTACAATGCTTGCCTGGAGC 59.263 55.000 0.00 0.00 44.14 4.70
2182 2207 0.737219 GCTACAATGCTTGCCTGGAG 59.263 55.000 0.00 1.10 0.00 3.86
2183 2208 0.329261 AGCTACAATGCTTGCCTGGA 59.671 50.000 0.00 0.00 40.93 3.86
2184 2209 0.454600 CAGCTACAATGCTTGCCTGG 59.545 55.000 0.00 0.00 41.98 4.45
2185 2210 0.179145 GCAGCTACAATGCTTGCCTG 60.179 55.000 0.00 0.00 41.98 4.85
2186 2211 0.609957 TGCAGCTACAATGCTTGCCT 60.610 50.000 0.00 0.00 44.17 4.75
2187 2212 0.179145 CTGCAGCTACAATGCTTGCC 60.179 55.000 0.00 0.00 44.17 4.52
2188 2213 0.524862 ACTGCAGCTACAATGCTTGC 59.475 50.000 15.27 0.00 44.17 4.01
2189 2214 3.670311 CTACTGCAGCTACAATGCTTG 57.330 47.619 15.27 0.00 44.17 4.01
2201 2226 4.424061 TTTTGCATTGTAGCTACTGCAG 57.576 40.909 28.87 13.48 44.61 4.41
2202 2227 4.844998 TTTTTGCATTGTAGCTACTGCA 57.155 36.364 27.73 27.73 42.48 4.41
2220 2245 7.393234 TGTTGACTATAGCCATTGTAGCTTTTT 59.607 33.333 0.00 0.00 41.83 1.94
2221 2246 6.884295 TGTTGACTATAGCCATTGTAGCTTTT 59.116 34.615 0.00 0.00 41.83 2.27
2222 2247 6.414732 TGTTGACTATAGCCATTGTAGCTTT 58.585 36.000 0.00 0.00 41.83 3.51
2223 2248 5.989477 TGTTGACTATAGCCATTGTAGCTT 58.011 37.500 0.00 0.00 41.83 3.74
2224 2249 5.614324 TGTTGACTATAGCCATTGTAGCT 57.386 39.130 0.00 0.00 44.49 3.32
2225 2250 5.237344 CCTTGTTGACTATAGCCATTGTAGC 59.763 44.000 0.00 0.00 0.00 3.58
2226 2251 6.582636 TCCTTGTTGACTATAGCCATTGTAG 58.417 40.000 0.00 0.00 0.00 2.74
2227 2252 6.553953 TCCTTGTTGACTATAGCCATTGTA 57.446 37.500 0.00 0.00 0.00 2.41
2228 2253 5.435686 TCCTTGTTGACTATAGCCATTGT 57.564 39.130 0.00 0.00 0.00 2.71
2229 2254 6.294473 AGATCCTTGTTGACTATAGCCATTG 58.706 40.000 0.00 0.00 0.00 2.82
2230 2255 6.328672 AGAGATCCTTGTTGACTATAGCCATT 59.671 38.462 0.00 0.00 0.00 3.16
2231 2256 5.843421 AGAGATCCTTGTTGACTATAGCCAT 59.157 40.000 0.00 0.00 0.00 4.40
2232 2257 5.211973 AGAGATCCTTGTTGACTATAGCCA 58.788 41.667 0.00 0.00 0.00 4.75
2233 2258 5.279256 GGAGAGATCCTTGTTGACTATAGCC 60.279 48.000 0.00 0.00 0.00 3.93
2234 2259 5.279256 GGGAGAGATCCTTGTTGACTATAGC 60.279 48.000 0.00 0.00 0.00 2.97
2235 2260 5.835819 TGGGAGAGATCCTTGTTGACTATAG 59.164 44.000 0.00 0.00 0.00 1.31
2236 2261 5.598830 GTGGGAGAGATCCTTGTTGACTATA 59.401 44.000 0.00 0.00 0.00 1.31
2237 2262 4.407296 GTGGGAGAGATCCTTGTTGACTAT 59.593 45.833 0.00 0.00 0.00 2.12
2238 2263 3.769844 GTGGGAGAGATCCTTGTTGACTA 59.230 47.826 0.00 0.00 0.00 2.59
2239 2264 2.569404 GTGGGAGAGATCCTTGTTGACT 59.431 50.000 0.00 0.00 0.00 3.41
2240 2265 2.355209 GGTGGGAGAGATCCTTGTTGAC 60.355 54.545 0.00 0.00 0.00 3.18
2241 2266 1.909302 GGTGGGAGAGATCCTTGTTGA 59.091 52.381 0.00 0.00 0.00 3.18
2242 2267 1.630369 TGGTGGGAGAGATCCTTGTTG 59.370 52.381 0.00 0.00 0.00 3.33
2243 2268 2.044793 TGGTGGGAGAGATCCTTGTT 57.955 50.000 0.00 0.00 0.00 2.83
2244 2269 1.842562 CATGGTGGGAGAGATCCTTGT 59.157 52.381 0.00 0.00 0.00 3.16
2245 2270 1.476471 GCATGGTGGGAGAGATCCTTG 60.476 57.143 0.00 0.00 0.00 3.61
2246 2271 0.842635 GCATGGTGGGAGAGATCCTT 59.157 55.000 0.00 0.00 0.00 3.36
2247 2272 1.059006 GGCATGGTGGGAGAGATCCT 61.059 60.000 0.00 0.00 0.00 3.24
2248 2273 1.453669 GGCATGGTGGGAGAGATCC 59.546 63.158 0.00 0.00 0.00 3.36
2249 2274 1.059006 AGGGCATGGTGGGAGAGATC 61.059 60.000 0.00 0.00 0.00 2.75
2250 2275 0.268869 TAGGGCATGGTGGGAGAGAT 59.731 55.000 0.00 0.00 0.00 2.75
2251 2276 0.399091 CTAGGGCATGGTGGGAGAGA 60.399 60.000 0.00 0.00 0.00 3.10
2252 2277 1.414061 CCTAGGGCATGGTGGGAGAG 61.414 65.000 0.00 0.00 0.00 3.20
2253 2278 1.384502 CCTAGGGCATGGTGGGAGA 60.385 63.158 0.00 0.00 0.00 3.71
2254 2279 0.988145 TTCCTAGGGCATGGTGGGAG 60.988 60.000 9.46 0.00 0.00 4.30
2255 2280 0.551377 TTTCCTAGGGCATGGTGGGA 60.551 55.000 9.46 0.00 0.00 4.37
2256 2281 0.395724 GTTTCCTAGGGCATGGTGGG 60.396 60.000 9.46 0.00 0.00 4.61
2257 2282 0.748005 CGTTTCCTAGGGCATGGTGG 60.748 60.000 9.46 0.00 0.00 4.61
2258 2283 0.748005 CCGTTTCCTAGGGCATGGTG 60.748 60.000 9.46 0.00 0.00 4.17
2259 2284 1.607612 CCGTTTCCTAGGGCATGGT 59.392 57.895 9.46 0.00 0.00 3.55
2260 2285 4.559502 CCGTTTCCTAGGGCATGG 57.440 61.111 9.46 6.95 0.00 3.66
2265 2290 4.171103 CCGGGCCGTTTCCTAGGG 62.171 72.222 26.32 1.35 34.81 3.53
2266 2291 4.171103 CCCGGGCCGTTTCCTAGG 62.171 72.222 26.32 13.13 0.00 3.02
2267 2292 2.963101 AACCCGGGCCGTTTCCTAG 61.963 63.158 26.32 7.19 0.00 3.02
2268 2293 2.929477 AACCCGGGCCGTTTCCTA 60.929 61.111 26.32 0.00 0.00 2.94
2269 2294 4.653888 CAACCCGGGCCGTTTCCT 62.654 66.667 26.32 0.00 0.00 3.36
2293 2318 1.748879 TACAATGGCGGCCTCAAGC 60.749 57.895 21.46 0.00 42.60 4.01
2294 2319 0.676466 TGTACAATGGCGGCCTCAAG 60.676 55.000 21.46 9.92 0.00 3.02
2295 2320 0.958382 GTGTACAATGGCGGCCTCAA 60.958 55.000 21.46 0.00 0.00 3.02
2296 2321 1.376683 GTGTACAATGGCGGCCTCA 60.377 57.895 21.46 0.00 0.00 3.86
2297 2322 1.376683 TGTGTACAATGGCGGCCTC 60.377 57.895 21.46 0.00 0.00 4.70
2298 2323 1.674322 GTGTGTACAATGGCGGCCT 60.674 57.895 21.46 1.61 0.00 5.19
2299 2324 2.696759 GGTGTGTACAATGGCGGCC 61.697 63.158 13.32 13.32 0.00 6.13
2300 2325 2.696759 GGGTGTGTACAATGGCGGC 61.697 63.158 0.00 0.00 0.00 6.53
2301 2326 2.043980 GGGGTGTGTACAATGGCGG 61.044 63.158 0.00 0.00 0.00 6.13
2302 2327 1.302913 TGGGGTGTGTACAATGGCG 60.303 57.895 0.00 0.00 0.00 5.69
2303 2328 0.251165 AGTGGGGTGTGTACAATGGC 60.251 55.000 0.00 0.00 0.00 4.40
2304 2329 2.304761 AGTAGTGGGGTGTGTACAATGG 59.695 50.000 0.00 0.00 0.00 3.16
2305 2330 3.695830 AGTAGTGGGGTGTGTACAATG 57.304 47.619 0.00 0.00 0.00 2.82
2306 2331 5.364735 GGTATAGTAGTGGGGTGTGTACAAT 59.635 44.000 0.00 0.00 0.00 2.71
2307 2332 4.711355 GGTATAGTAGTGGGGTGTGTACAA 59.289 45.833 0.00 0.00 0.00 2.41
2308 2333 4.264307 TGGTATAGTAGTGGGGTGTGTACA 60.264 45.833 0.00 0.00 0.00 2.90
2309 2334 4.280819 TGGTATAGTAGTGGGGTGTGTAC 58.719 47.826 0.00 0.00 0.00 2.90
2310 2335 4.606476 TGGTATAGTAGTGGGGTGTGTA 57.394 45.455 0.00 0.00 0.00 2.90
2311 2336 3.478175 TGGTATAGTAGTGGGGTGTGT 57.522 47.619 0.00 0.00 0.00 3.72
2312 2337 4.202326 GGAATGGTATAGTAGTGGGGTGTG 60.202 50.000 0.00 0.00 0.00 3.82
2313 2338 3.971971 GGAATGGTATAGTAGTGGGGTGT 59.028 47.826 0.00 0.00 0.00 4.16
2314 2339 3.326880 GGGAATGGTATAGTAGTGGGGTG 59.673 52.174 0.00 0.00 0.00 4.61
2315 2340 3.211465 AGGGAATGGTATAGTAGTGGGGT 59.789 47.826 0.00 0.00 0.00 4.95
2316 2341 3.870559 AGGGAATGGTATAGTAGTGGGG 58.129 50.000 0.00 0.00 0.00 4.96



Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.