>input_sequence_83354
--------------------------------------------------------------------------------
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-------------------------------------------------------ATGGCGGAAGCTTTAGCTCTAAAAT
TCGGTCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTAGAAATTCGGATAATATGGAGGTGATTGATACTATG
AATGATGGAGGACAGTCGGCGGGTGCGGCGGCAGCAATCTTCGATGACTGTTTTCACTATGCTTGTGATTTCGTTACTGT
TAGATTTGA-GCACTATAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTCTTTGACTTCC
GATTGGTTTGAGGAGCCTTTAAATGAAATTGTAATTATCCTCACAAACGATGTACTACTTATTACAAATGAATAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3D_1_TraesCS3D01G134300
CGGCTCGCTTCAGTGTTTGTAGTCGTCGCTAGGTGGTCTACGGATCTGGATGTAATTTTTATTATTTCTAGTGTTCGTTG
TACTATCATGATTGAAGATGAATAGATTGAAAGTTTTTTCCCGCAATTTTTTTGTCTTATGGCGTATGCTACATAGTACA
ATCCCATGCCGAGTTACGCGAAGGTTTCACCTATCTGCCCCACTTGCTCGGAGGGTTTAGGCCCTGTTTGGTTCATAAGT
CCTGGGACTTTTTTTAGTCCCAACTTATAAGTCCCAAGTCCCTAAAAAGTCCCCACCTATTTGGTTCCTGGGACTTAACA
TGGACCAAAAGACCATATTACAACTATAAGTCCCTATAAGTCCCTCCTTGAGAGTCTTATTTCATAAGTCCCAAATGCCC
ACTTTAAGTCCCTATAAGTCCCTCCTGTTTGGTTTAGATGGGACTTAAAGGGACTTTTTTAAGTCCCTACACCAATAAGT
CCCTGTAACCAAACACCTTCTTAGAAGATACAAAACATATGCTCTTCTGCTGTAGTAAAGCAAAGGAGGTCTGGA-AAAG
GTTGGGGATGGATGATATTATTGATAAAGCTTGTGAAGTTGACCGTGCGGGAGAGGTGGTGTTGGAG-------TATCTA
CTACTCCTACCAGATCAATATTTGTGGATATTGGGTTAGCACAATGTACGTGAGATGATTGCTATTTCAGCATGGTATCT
AT-G-TGGGAAAGACGGAAGTTGGTACACAATG----AGAAAACTCAAAATGTAACTAAGATCTCAATGGGGATTCTTGC
TCTGACCAAAATTTTTGTTAATGCATTATCCCCCAAGGCGTCGATGAAAAAGGAGGGCTGGTCTTGTCCTCCAAGAGTTT
TCGTTAAACTTAATGTTGACGCTTCTTTTGATCATGTTCTTCTTAGGTGTTCCATGGGAGCGGTCCTTTGAGACGACAAA
GGCAGGTTCATAGCTGGAGGGAATGAGAAAATAGATTTTT-ACGCGGATGTGTTGATGGCGGAAGCTTTAGCTCTAAAAT
TCGGTCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTAGAAATTCGGATAATATGGAGGTGATTGATACTATG
AATGATGGAGGACAGTCGGCGGGTGCGGCGGCAGCAATCTTCGATGACTGTTTTCACTATGCTTGTGATTTCGTTACTGT
TAGATTTGA-GCACTATAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTCTTTGACTTCC
GATTGGTTTGAGGAGCCTTTAAATGAAATTGTAATTATCCTCACAAACGATGTACTACTTATTACAAATGAATAAAGTCA
GAAA-TTTTCA-AAAAAAAGACTTGTGCCACTTTTCTTACTTTTATATAAATAAAAATTGTCTTATTTCAAAGTGTTACA
TATGCTTTATT---GTGTTTTTTCTTGTTCCAAAGTGTCTCGTAAAGTTTCATTGTATACCAAC-AATAAGAGTGCACTT
CTTTCTGATTAAATTTACTAGTACATAACAATACACAATGGAACATTTCAATGCACGTTGAAACAAGAAAAAGAATCAGT
GTAACACTATGAAACAAGACAAAATCTGCCAATTCCCCCCAAAATAGCATGAATCTCAAAGCAACGATGAATGGTGGATC
CATGCATGGCATACCCCCATGTATGGTAGAATAGCTTTTCTCTTAAAGCTAGTAGCTCTCGAAGGCTTTGACTTAACGTC
CTTAGCCCTCATGCCCTTGTTGCACCTCCCTGAGGAGACGAGATTTCCCT-AAGGGTGTTCTGTTATTGACAACTTTATC
TTGGTGGTGGAGCTGGTCCAATGTTGCCACAAGCGTGGGTTGACTTTAGTTGTACTCAAGCTCGACTTCCCGAAAGCCTT
CAGCCCCGTCTT-CTGGCTTAACCTTGATCATGTACTGGAAGCCTCCACCTTGGTGGATGCACTATGTCTTAGGCCTCAA
TGTCTCCTACCACTCTGTCGTCATTCTCAATAGTGTCCCTCGACAAGTGGACTTCCCACAAAGCATGGGCTCCGACATGG
GACCCCCCTTTCTTATTTATATTGGCCGCAACTGTCTTGAAAGGACCCGTGCTTGCTATTGGAGCAGAGGACGGACTGCA
ACACCCCATCATCCACAGCCAGTAGTAGCGTCAGCATTAGCATACGCTCCAGGCAAGCATTGTAGCTGCAGTAGCTACAA
TGCAAAAAAGCTACAATGGCTATAGTCAACAAGGATCTCTCCCACCATGCCCTAGGAAACGGCCCGGGTTGCCTAGGGCT
TGAGGCCGCCATTGTACACACCCCACTACTATACCATTCCCTA
>chr3D_500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CTTAGAAGATACCAAACATATGCTCTTCCGATTTAGTAAAGCAAAGGAGGTCTGAA-AAAG
GCTGGGGATGGATGATATTATTGATAAAACTTGTGAAGTTGACCGTGCGGGAGAGGCAGTGTTGGAG-------TATCTA
CTACTCCTACTAGACCAAGATTTGTGGATATTGGGT-ACCACAATGTACGTGAAATGATTGCTATATCAGCATGGTATCT
ATGG-TGGGAAAGACGGAAGTTGGTACACAATG----A----ACTCAAAATGTAACTCAAATTTCAATGGGGATTCTCGC
CCTGACCAAATTTTTTGTTAATGCATTATCCCCCAAGGCGTCGATGAAGAAGGTGGTCTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATGTTGATGCTTATTTTGATCACGATCTTCTTAGGGGTTCCATGGGACCGGTCCTTCGAGACGACAAA
GGCAGGTTTATTGCTGGAGGGAACGAGAAAATTGATTTCT-GCACGGATGTGTTGATGGCGGAAGCTTTAGCTCTCAGAT
TCGGTCTAACACTGGCGCAAAGGGTGGGATGCAATTGCCTTGTTATAAATTCGGATAATATGGAGGTGATT-AAACTATG
AATGATGGAGGACAGTCAGCGGGTGCGGCGGCAACAATTTTCGATGATTGTTATCATTATGCTTGTGATTTCGTTACTAC
TAGATTTGA-GCACTGTAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTATTTGACTTCC
GAGTGGATTGAGGAGACTTTAAATGAAATTGTAATGATCCTCACAAACGATGTACTACTTATTACAAATGAATAAAATCT
GAGTTTTT---CAAAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr5A_500
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CTTAGAAGATACAAAACATATGCTCTTCCACTGTAGTAAAGCAAAGGAGGTCTGGA-AAAG
GCTGGGGATGGATGATATTATTGATAATGCTTGTGAAGTGGACCGTGCGGGAGAGGCGGTGTTGGAG-------TATCTA
CTACTCCTACCAGATCAAGATTTGTGGATATTGGGTTACCACATTGTACGTGAGATGATTGCTATTTCAGCATGGTATAT
AT-GGTGGAAAAAAAGAAAGTTGGTACATAGTGAGAAA----ACTCAAAATGTAACTCAGATCTCAATGAGGATTCTTGC
TCTGACCAAATTTTTTGTTAATGCATTATCCCCCAAGGCGTCGATGAAAAAGGAGAGTTGTTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATTTTGATGCTTCTTTTGATCACGATCTTCTTAGTGGCTCCATGGGAGCAGTCCTTCGAGAGGACAAA
GGCAAGCTCATAGCTGGAGGGAATGAGAAAATAGATTTTT-CCGCAGATGTGTTGATGGCGGAAGCTTTAGCTCTAAAAT
TCGGTCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTATAAATTCGGATAATATGGAGGTGATTGATACTGTG
AATGATGGAGGACAGTTGGCGTGTGCGGCGGCAGCAATCTTCGATGATTGTTTTCATTATGCTTGTGATTTTGCTACTAC
TAGATTTGA-GCGCTGTAACGGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTTGTTGACTTCC
GATTCGTTTGAGGAGCCTTAAA-TGAATTTGTAATGATCCTCACAAACGATGTACTACTTATTACAAATGAATAAAGTA-
GAGTTTTCTCA-AAAAAA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr6D_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGAAGATACAAAACATACGCTCTTCCGTTGTAGTAAAGCAAAGGAGGTCTGGA-AAAG
GCTGGGGATGGATGATATTATTGATAAAGCATGTGAAGTTGACCGCGTGGGAGAGGCGGTGTTGGAG-------TATCTA
CTACTCCTACCAGATCAACATTTGTGGATATTGGGTTACCACAATGTACGTGAGATGATTGCTATTTCAGCACGGTATCT
ATGG-TGGGAAAGACGGAAGCTGGTACACAATG----A-AAAACTCAAAATGTAATTCAGATCTCAATGGG-ATACTTGC
TCTAACAAAAAAAATTGTTAATGCATTATCCCCCAAGGCGTCGTTGAAAAAGGAGAGTTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATGTTGATGCTTCTTTTGATCATGATCTTCTTAGGGGTTCCATGGGAGCGGTCCTTCGAGACGACAAA
GGCAGGTTCATAGCTGGAGGGAATGAGAAAATAAATTTTT-GCGCGGATGTGTTGATGGCAGAAGCTTTAGCTCTAAAAT
TTGGTCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTATAAATTCAGATAATATGGAGGTGATTGATACTATG
AATGATGGAGGATAATTGGCGGGTCCGGTGGAAGCAATCTTTGATGACTGTTTTCATTATGCTTGTGATTTCGTTACTGC
TAGATTTGA-GCACTGTAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTATCTAGATTTTCTTTCACTTCT
GATTGGTTTGAGGAGCCTTTAAATGAAATTATAATGATCCTCACAAACGATGTACTACTTATTACAAATGAATAAAGTCT
GAGGTTTTTTTCAAAAAAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr6D_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGATGATACAAAACATATGCTCTTCCGCTGTAGTAAAGCAAATGAGGTCTGGA-AAAG
GCTAGGGATGGATGATATTACTGATAAAGCTTGTGAAGTTGACCGTGCGGGAGAGGCAGTGCTGGAG-------TATCTA
GTACTCCTACCAGATCAACATTTGTGGATATTGGGTTACCATAATGTACGTGAGATGATTGCTATTTCAGCATGGTACCT
ATGG-TGGGAAAGACGGAAGCTGGTACACAATG----AAAAAACTCAAAATGTAACTCAGATCTAAATGGGGATTCTTGC
TCTAACAAAAAAAA---TTAATGCATTATCACCCAAGGCGTCGATCAAAATGGAGAGTTGGTCTTGTCCTTCAAGAGGTT
TCGTTAAACTTAATGTTGATGCTTCTTTTGATCACGATCTTCTTAGGGGTTCCATGGGAGCGGTCCTTCGAGACGACAAA
GGCAGGTTCATAGCTGGAGGGAATGAGAAAATAGATTTTT-GCGCAAATGTGTTGATGGCGGAAGCTTTAGCTCTAAAAT
TCGTTCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTATAAATTCAGATAATTTGGAGGTGATTGATACTATG
AATGATGGAGGACAATCAGTGGGTGCGGCGGCAGCAATCTTTAATGACTTTTTTCATTATGCTTGTGATTTCGTTATTGC
TAGATTTGA-GCATTGTAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTCTTTGACTTCT
GATTGGTTTGAGGAGCCTTTAAATGAAATTGTAATGATCCTCACAAACGATGTACTACTTATTACAAATGAATAAAGTAT
GAGTTTTTTCA-AAAAAAAGA-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3B_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGAAGATACAAAACATACGCTCTTCCGCTGTAGTAAAGCAAAGGAGGTCTGGA-AAAG
GCTGGGGATGGATGATATTATTGATAAAGCTTGTGAAGTTGACCGTGCGGGAGAGGCGGT------G-------TATCTA
CTACTCCTACCAGATTAACATTTGTAGATATTGGGTTACCACAATGTACATGAGATGATTGTTATTTCAGCATGGTATCT
ATGA-TGGGAAAGACGGAAGCTGGTACACATGAAAA-A----ATTCAAAATGTAACTCAGATCTCAATGGGGATTCTTGC
TCTAACAT-TTTTTTTGTTAATGCATTATCCCCCAAGGCGTCGATGAAAAAGGAGAGTTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATGTTGATGTTTCTTTTTATCACGATCTTCTTAGGGGTTCCATGGGAGCGGTCCTTCGAGACGACAAA
GGCAGGTTCATAGCTGGAGGGAATGAGAAAATAGATTTTT-ATGTGGATGTGTTGATGGCAGAAGCTTTAGCTCTTAAAT
TTGATCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTATAAATTTGGATAATATGTAGGTGATTGATACTATG
AATGATGGAGGACAATCGGCGGGTGCGGCGGCAGCAATCTTTGATGATTGTTTTCATTATGCTTGTGATTTCGTTACTGC
TAGATTTTTTGCACTACAATAGGGAAGCTAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTCTTTGACTTCT
GATTGGTTTGAGGAGCCTTTAAATGAAATTATAATGATCCTCACAAACAATGTACTACTTATTAGAAATGAATAAAGTCT
GAGCTTTTTCA-AAAAAAA-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr7B_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGAAGATACAAAACATATGCTCTTCCGCTGTAGTAAAGCAAAGGAGGTCTTGA-AAAG
GCTAGGGATGAACGATATTATTGATAAAGCTTGTGAAGTTGACCGTGCGGAAGAGGCGGTGTTGGAG-------TATCTA
CTACTCCTACCATATCAACATTTGTGGATATTGGGTTACCATAATGTACCTGAGATGATTGCTATTTCAGCATGGTACCT
ATGG-TGGGAAAGAAGGAAGCTGGTACACAATG----AAAAAACTCAAAATGTAACTCAGATCTCAATGGGGATTCTTGC
TCTAACAAAAAAAATTGTTAATGCATTTTCACCCAAGGCGTCGATCAAAATGGAGAGTTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATGTTGATGCTTCTTTTGATCACGATCTTCTTAGGGGTTCCATGGGAGCGGTCCTCCGAGACGACAAA
GGCATGTTCATAGCTGGAGGAAATGAGAAAATAGATTTTTTGCGCAGATGTGTTGATGGCGGAAGCTTTAGCTCTAAAAT
TCGGTCTAACACTGGCGCAACGGGCGGGATGCAATCGCCTTATTATAAATTCAGATAATTTGGAGGTGATTGATACTATG
AATGATGGAGGACAATCGGCGGGTGCGGCGGCAGCAATCTTTGATGATTGTTTACATTATGCTTGCGATTTCGTTATTGC
TAGATTTAA-ACACTGTAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTCTTTGACTTCT
GATTGGTTTGAGATGCCTTTAAACGAAATTTTAATGATCCTCATAAACGATGTACTACTTATTACAAATGAATAAAGTCT
GAGTTTTTTTT-AAAAAAAACTT---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr2D_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGAAGATACAAAACATATGCTCTTCCGCTGTAGTAAAGCAAAGGAGGTCTGGA-AA-G
GCTGGGGATGGATGATATAATTGATAAAGCTTGTGAATTTGATCGTGCGGGAGAGGCGGTGATGGAG-------TATTTA
CTACTCCTACGAGATCAAGATTTGCGGATATTGGGTTACCACAATGTATGTGAGATGATTGCTATTTCAGCATGGTATCT
ATGG-TTGCAAAGGCGGAAGTTGGTACACAATG----AGAAAACTCAAAATGTAACTCAGATCTCAATGGGGATTCTTGC
TCTGACAAAAAAA-TTGTCAATGCATCATCCCCCAAGGCATCGATGAAGAAGGTGGTCTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATGTTGATGCTTCTTTTGATCACGATCTTCTTAGGGGTTCCATGGGAGCGATCCTTCGAGACGACAAA
GGCAGGTTTATTGTTGGAGGGAATGAGAAAATAGATTTT-TGCACGGATGTGTTGATGTCGGAAGCTTTAGCTCTCAAAT
TCGGTCTAAAGCTGGCGCAAAGGGCGGGATGCAATCACCTTGTTATAAATTCGGATAATATGGAGGTGATCGAAACTATG
AATGACGAAGGACAGTCGACGGGTGCGGCGGCAGCAATCTTCGATGATTGTTATCATTATGCTTGTGATTTTGTTACTGC
TAGATTTGA-GCACTATAATAGGGAAGCAAATAAAGTAGCTCATGAGCTTGCTAGATTAGCTAGATTTTCTTTGACTTTC
GATTGGTTTGAGGAGCCTTTAAATGAAATTGTAATGATCCTCACAAAGGATGTACTACTTATTACTAATGAATAAAACTT
GAGGTTTT---CAAAAAAAAG-----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr7D_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGAAGATACAAATCATATGATCTTCCGCTGTAGTAAAGCAAAGGAGGTGTGGA-AAAG
GCT-GGGGTGGATGATATTATTGATAAAGCTTGTGAAGTTGACCGTGCGGGAGAGGCGGTGTTGGAG-------TATTTA
CTACTCCTACCAGATCAAGATTTACGGATATTGGGTGACCACAACGTACGTGAGATGATTGCTATTTCAGCATGGTATCT
ATGA-TGGGAAAGACGAAAACTGGTACACAATG----AGAAAACTCAAAATGTAACTCAAATCTCAATGGGGATTCTTGC
TCTTACCAATTTTTTTGTTAATGCATCATCCCCCGAGGCGTCGATGAAGAAGGTGGTCTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAATTTAGTGTTGATGCTTCTTTTGATCACGATCTTCTTAGGGGTTCCATGGGAGCGGTCCTTCGAGACGACAAA
AGCAGGTTTATTGCTGGAGGGAATCAGAAAATAGATTTT-TGCGCGGATGTGTTGATGGCAGAAGCTTTAGCTCTCAAAT
GCGGTCTAACACCGGCGCAAAGGGCGGGATGCAATCGCCTTGTTATAAATTCAGATAATATGGAGGTGACTGAAACTATG
AATGATGGAGGACAGTCGGCGGGCGCGGCAGCAGCAATCTTCGATGATTGTTATCATTATGCTTGTGATTTCGTTACTGC
TAGATTTAA-ACACTGTAATAGGGAAGCAAACAAAGTAGCTCATGAGCTTGCTAGACTAGCTA-ATTTTCTTTGACTTTC
GATTGGTTTGAGGAGCCTTTAAATGCAATTGTAATGATCCTCACAAACGATATACTACTTATCACAAATAAATAAA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3A_501
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------TTAGAAGATACAAAACTTATGCTCTTCTGCTGTAGTAAAGCAAAGAAGGTTTGGAAAA-G
GCTAGGGATGGATGATATTATTGATAAAGCTTGTGAAGTTGACCGTGCGGGAGAGACGGT------GTTGGGAGTATCTA
CTACTCCTACCAGATCAAGATTTGTGGATATTGGGTTACCACAATGTACGTGAGATGATTGTTATTTCAGCGTGGTATTT
ATGA-TGGGAAAGACAGAAGCTGGTACACAATG----AAAAAACTCAAAATGTAACTCACATCTCAATGGGGATTCTTGC
TCTAACAAAAAAAATTGTTAATGCATTAT-CCCCAAGGCATCGATGAAAATGGAGAGTTGGTCTTGTCCTCCAAGAGGTT
TCGTTAAACTTAATGTTGATGCTTCTTTTGATGACGATCTTCTTAGGGGTTCTATGGGAGCGGTCCTTCGAGACGGCAAA
GGAAGGTTCATAGCTGGAGGGAATGAGAAAATAGATGTT-TGCGTGGATGTGTTGATGGCAAAAGTTTTAGCTCTAAAAT
TCGATCTAACATTGGCACAACGGGCGGGATGCAATCGCCTTACTATAAATTCAAATAATACGGAGGGGATTGATACTATG
AATGATGGAGGACAATCAGCGGGTGCGGCGGCAACAATCTTTGATGATTGTTTCCATTATGCTTGTGGTTTCGTTACTGG
TAGATTTGA-GCATTGTAATAGGGAAGCAAATAAAGTAGCTCATGAGCTGGCTAGATTAGCAAGATCTTCTTTGACTTCT
GATTGGTTTGAGCAGCCTTTAAATGAAATTGTAATGATCATCAGAAACGATCTACTACTTGTTACAAATGAATAAAGTCT
GAGCTTTTTCA-AAAACAAA------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>chr3B_1360
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AAGACTTGTGCTACTTTTCTTACTCTTATATAAATAAATATTGTCTTATTTCAAAGTGTTACT
ACATAAGTTTTATCGTGTTTTTTCTTGTTCCAAAGTGTCTCGTAAAGTTTCATCGTGTACAGACAAATAAGAGTGCACTT
CTTCCTGATTGGATTTACTAGTACACAACGATACACAATGAAACATTCCGGTACATGTTGAAACAAGAAAAGAAAAACCA
GTGTCACTATGAAACAAGACAAAATCTGTCAATTCTG---AAAATAGCATGAATCTCAA-GCTACCCTGAATGGTAGATC
CATGTATGGAATATCGCC-TGCATGGTATAAATGTTTTTCTCTCAAAGCTAGTAGCTCTTCGAGGCTTTGACTTTACATC
CCTAGCCCTCATGCCTTTGTTGTACCACCCGGAGGAGATGAGATTTCCCAAAAGGGTATTCTGTTTTTGACAATTTTATC
TTTCTGGCGAAGCTAGTCCAATGCAGCCACATGCGTGGGTTGCCTTTAGTTGTACTCAAGTTTGACTTCCTGAAAGCCTT
CAAGTTCCGTCTCCTGGCTTAACCTTGATCGTGTGCTTGAAGCCTCCACCTCGGTGGATGCACTATGTCTTAGGTCTCAA
TGCCTCCTACCACTATGTCGGCATTCTCAAAAGCGTCCCACGACAAGTGGACTTCCG-CAAAGCATGGGCTCCGACATGG
GACCCTCGTTGCTTATTTATATTGGACGCAACTGTCCTGCAAGGACTCATGCTTGCTATTGGAG----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSS-------------------------------------------------------------
-S------------------------------------------------------S-----------------------
------------------S-------------------S-----------------------------------------
---------------------------------------------------------S----------------------
-----------------------------------------------------------------------------S--
-------------------S----------------S----------S--------------------S-----------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
--------------------------------------------------------S----------------------S
--------------------------------------------------------------------------------
-----------------------------------S-------------------------------------------S
--SS------------------------S------------S-------------S-----------------------S
SSSSSSS-S--------------------------------------------S--S---SS------------------
---S------SS-------------S---S----------S------S-SS-S--S---------------SS--SSSSS
--SS------------------------S------SSSSS-------------------S--S--SS--------S----
----S----S---S-S--S--S------S--SS-S--------S---------------SSS------------S--S--
-S-------------S------S---S---S-------S----------S-------S-------S-------S------
--SS---S-S----S--------SS------S----------S-----------------S-S-------S---------
--SSSS-SSSS-------------------S---S--S-------------S----------------------S-----
--S-----------S-----S---------S--S-----S----------------SS----------------------
-----S-S--S--------------S----------S--S------S-S---------------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------GGGTTTAGGCCCTGTTTGGT--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
>reverse_1901
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------CTCGACTTCCCGAAAGCCTT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------
