Multiple sequence alignment - TraesCS3D01G114800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G114800 chr3D 100.000 2489 0 0 1 2489 68272803 68275291 0.000000e+00 4597.0
1 TraesCS3D01G114800 chr3D 90.460 1195 60 14 747 1923 68170012 68171170 0.000000e+00 1526.0
2 TraesCS3D01G114800 chr3D 95.208 480 21 2 1 478 290935471 290934992 0.000000e+00 758.0
3 TraesCS3D01G114800 chr3D 87.838 666 51 10 833 1490 68833111 68833754 0.000000e+00 754.0
4 TraesCS3D01G114800 chr3D 89.720 428 32 4 1999 2415 68171594 68172020 1.010000e-148 536.0
5 TraesCS3D01G114800 chr3D 88.587 184 13 3 489 672 68169728 68169903 1.500000e-52 217.0
6 TraesCS3D01G114800 chr3D 94.872 39 2 0 1964 2002 68171274 68171312 7.430000e-06 62.1
7 TraesCS3D01G114800 chr3A 88.518 1289 70 31 761 1979 80225558 80226838 0.000000e+00 1489.0
8 TraesCS3D01G114800 chr3A 89.688 417 31 5 2009 2415 80279532 80279946 2.840000e-144 521.0
9 TraesCS3D01G114800 chr3A 92.537 201 14 1 528 727 80225370 80225570 1.130000e-73 287.0
10 TraesCS3D01G114800 chr3B 88.953 1222 71 16 734 1926 113512845 113511659 0.000000e+00 1450.0
11 TraesCS3D01G114800 chr3B 90.208 674 32 15 822 1491 113503576 113504219 0.000000e+00 848.0
12 TraesCS3D01G114800 chr3B 89.233 678 54 10 822 1491 112465804 112465138 0.000000e+00 830.0
13 TraesCS3D01G114800 chr3B 88.071 679 51 15 822 1491 112948546 112947889 0.000000e+00 778.0
14 TraesCS3D01G114800 chr3B 88.174 668 49 17 822 1480 113483345 113483991 0.000000e+00 769.0
15 TraesCS3D01G114800 chr3B 87.316 678 55 12 822 1491 112497302 112496648 0.000000e+00 747.0
16 TraesCS3D01G114800 chr3B 87.850 428 37 9 2002 2415 113511297 113510871 2.880000e-134 488.0
17 TraesCS3D01G114800 chr3B 81.159 483 52 13 1 478 785285361 785284913 3.940000e-93 351.0
18 TraesCS3D01G114800 chr3B 87.805 82 6 3 1925 2002 113511613 113511532 2.640000e-15 93.5
19 TraesCS3D01G114800 chr4D 88.513 679 58 11 822 1491 134550545 134549878 0.000000e+00 804.0
20 TraesCS3D01G114800 chr4D 95.277 487 20 3 1999 2484 134626196 134625712 0.000000e+00 769.0
21 TraesCS3D01G114800 chr4D 96.257 187 6 1 1815 2001 134626582 134626397 3.110000e-79 305.0
22 TraesCS3D01G114800 chr1D 95.833 480 18 2 1 478 289514954 289514475 0.000000e+00 774.0
23 TraesCS3D01G114800 chr1D 94.363 479 13 7 1 478 289564992 289564527 0.000000e+00 723.0
24 TraesCS3D01G114800 chr7D 94.375 480 24 3 1 478 125891763 125892241 0.000000e+00 734.0
25 TraesCS3D01G114800 chr6D 88.125 480 25 18 1 478 435066604 435066155 2.180000e-150 542.0
26 TraesCS3D01G114800 chrUn 85.714 203 28 1 6 207 382170859 382171061 1.940000e-51 213.0
27 TraesCS3D01G114800 chrUn 86.294 197 26 1 12 207 397051266 397051070 1.940000e-51 213.0
28 TraesCS3D01G114800 chr7A 89.130 138 10 1 359 491 556656829 556656966 1.530000e-37 167.0
29 TraesCS3D01G114800 chr2A 87.586 145 17 1 335 478 752779692 752779548 1.530000e-37 167.0
30 TraesCS3D01G114800 chr1B 82.759 174 28 2 294 466 323666510 323666682 1.190000e-33 154.0
31 TraesCS3D01G114800 chr5B 92.857 70 5 0 1 70 553923126 553923195 4.380000e-18 102.0
32 TraesCS3D01G114800 chr2D 92.857 70 4 1 1 70 65538277 65538345 1.580000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G114800 chr3D 68272803 68275291 2488 False 4597.000000 4597 100.000000 1 2489 1 chr3D.!!$F1 2488
1 TraesCS3D01G114800 chr3D 68833111 68833754 643 False 754.000000 754 87.838000 833 1490 1 chr3D.!!$F2 657
2 TraesCS3D01G114800 chr3D 68169728 68172020 2292 False 585.275000 1526 90.909750 489 2415 4 chr3D.!!$F3 1926
3 TraesCS3D01G114800 chr3A 80225370 80226838 1468 False 888.000000 1489 90.527500 528 1979 2 chr3A.!!$F2 1451
4 TraesCS3D01G114800 chr3B 113503576 113504219 643 False 848.000000 848 90.208000 822 1491 1 chr3B.!!$F2 669
5 TraesCS3D01G114800 chr3B 112465138 112465804 666 True 830.000000 830 89.233000 822 1491 1 chr3B.!!$R1 669
6 TraesCS3D01G114800 chr3B 112947889 112948546 657 True 778.000000 778 88.071000 822 1491 1 chr3B.!!$R3 669
7 TraesCS3D01G114800 chr3B 113483345 113483991 646 False 769.000000 769 88.174000 822 1480 1 chr3B.!!$F1 658
8 TraesCS3D01G114800 chr3B 112496648 112497302 654 True 747.000000 747 87.316000 822 1491 1 chr3B.!!$R2 669
9 TraesCS3D01G114800 chr3B 113510871 113512845 1974 True 677.166667 1450 88.202667 734 2415 3 chr3B.!!$R5 1681
10 TraesCS3D01G114800 chr4D 134549878 134550545 667 True 804.000000 804 88.513000 822 1491 1 chr4D.!!$R1 669
11 TraesCS3D01G114800 chr4D 134625712 134626582 870 True 537.000000 769 95.767000 1815 2484 2 chr4D.!!$R2 669

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
232 233 0.027063 AAAAACCAGCGTGTCGTTCG 59.973 50.0 0.0 0.0 0.0 3.95 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1666 1788 0.244721 GAAATTGCGCCCTGAAAGCT 59.755 50.0 4.18 0.0 0.0 3.74 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 3.075005 CCGATGGGTCAGACGGGT 61.075 66.667 0.00 0.00 41.41 5.28
36 37 2.494918 CGATGGGTCAGACGGGTC 59.505 66.667 0.00 0.00 0.00 4.46
37 38 2.494918 GATGGGTCAGACGGGTCG 59.505 66.667 0.00 0.00 34.09 4.79
38 39 2.036731 ATGGGTCAGACGGGTCGA 59.963 61.111 0.00 0.00 34.09 4.20
39 40 2.280823 GATGGGTCAGACGGGTCGAC 62.281 65.000 7.13 7.13 34.66 4.20
40 41 3.756727 GGGTCAGACGGGTCGACC 61.757 72.222 27.04 27.04 44.62 4.79
55 56 3.553597 GACCCAGTCGAATCGCTAG 57.446 57.895 0.00 0.00 0.00 3.42
56 57 0.030908 GACCCAGTCGAATCGCTAGG 59.969 60.000 0.00 3.99 0.00 3.02
57 58 1.300233 CCCAGTCGAATCGCTAGGC 60.300 63.158 0.00 0.00 0.00 3.93
58 59 1.300233 CCAGTCGAATCGCTAGGCC 60.300 63.158 0.00 0.00 0.00 5.19
59 60 1.300233 CAGTCGAATCGCTAGGCCC 60.300 63.158 0.00 0.00 0.00 5.80
60 61 1.455959 AGTCGAATCGCTAGGCCCT 60.456 57.895 0.00 0.00 0.00 5.19
61 62 0.178998 AGTCGAATCGCTAGGCCCTA 60.179 55.000 0.00 0.00 0.00 3.53
62 63 0.241481 GTCGAATCGCTAGGCCCTAG 59.759 60.000 13.77 13.77 37.16 3.02
63 64 0.178998 TCGAATCGCTAGGCCCTAGT 60.179 55.000 18.89 0.00 36.53 2.57
64 65 0.241481 CGAATCGCTAGGCCCTAGTC 59.759 60.000 18.89 10.31 36.53 2.59
65 66 1.329256 GAATCGCTAGGCCCTAGTCA 58.671 55.000 18.89 6.47 36.53 3.41
66 67 1.000052 GAATCGCTAGGCCCTAGTCAC 60.000 57.143 18.89 1.93 36.53 3.67
67 68 0.186386 ATCGCTAGGCCCTAGTCACT 59.814 55.000 18.89 0.00 36.53 3.41
68 69 0.752009 TCGCTAGGCCCTAGTCACTG 60.752 60.000 18.89 5.00 36.53 3.66
69 70 1.443828 GCTAGGCCCTAGTCACTGC 59.556 63.158 18.89 0.56 36.53 4.40
70 71 1.045911 GCTAGGCCCTAGTCACTGCT 61.046 60.000 18.89 0.00 36.53 4.24
71 72 0.749649 CTAGGCCCTAGTCACTGCTG 59.250 60.000 9.80 0.00 30.16 4.41
72 73 0.687757 TAGGCCCTAGTCACTGCTGG 60.688 60.000 0.00 0.00 0.00 4.85
73 74 2.124942 GCCCTAGTCACTGCTGGC 60.125 66.667 0.00 0.00 0.00 4.85
74 75 2.586792 CCCTAGTCACTGCTGGCC 59.413 66.667 0.00 0.00 0.00 5.36
75 76 2.185350 CCTAGTCACTGCTGGCCG 59.815 66.667 0.00 0.00 0.00 6.13
76 77 2.351244 CCTAGTCACTGCTGGCCGA 61.351 63.158 0.00 0.00 0.00 5.54
77 78 1.153745 CTAGTCACTGCTGGCCGAC 60.154 63.158 0.00 0.00 0.00 4.79
78 79 2.564553 CTAGTCACTGCTGGCCGACC 62.565 65.000 0.00 0.00 0.00 4.79
83 84 4.335647 CTGCTGGCCGACCCTGTT 62.336 66.667 0.00 0.00 35.15 3.16
84 85 4.329545 TGCTGGCCGACCCTGTTC 62.330 66.667 0.00 0.00 35.15 3.18
86 87 3.691342 CTGGCCGACCCTGTTCGA 61.691 66.667 0.00 0.00 41.78 3.71
87 88 3.649277 CTGGCCGACCCTGTTCGAG 62.649 68.421 0.00 0.00 41.78 4.04
88 89 3.379445 GGCCGACCCTGTTCGAGA 61.379 66.667 0.00 0.00 41.78 4.04
89 90 2.126031 GCCGACCCTGTTCGAGAC 60.126 66.667 0.00 0.00 41.78 3.36
90 91 2.178521 CCGACCCTGTTCGAGACG 59.821 66.667 0.00 0.00 41.78 4.18
91 92 2.504244 CGACCCTGTTCGAGACGC 60.504 66.667 0.00 0.00 41.78 5.19
92 93 2.126031 GACCCTGTTCGAGACGCC 60.126 66.667 0.00 0.00 0.00 5.68
93 94 3.644399 GACCCTGTTCGAGACGCCC 62.644 68.421 0.00 0.00 0.00 6.13
94 95 4.452733 CCCTGTTCGAGACGCCCC 62.453 72.222 0.00 0.00 0.00 5.80
95 96 3.382832 CCTGTTCGAGACGCCCCT 61.383 66.667 0.00 0.00 0.00 4.79
96 97 2.125912 CTGTTCGAGACGCCCCTG 60.126 66.667 0.00 0.00 0.00 4.45
97 98 3.649277 CTGTTCGAGACGCCCCTGG 62.649 68.421 0.00 0.00 0.00 4.45
98 99 3.379445 GTTCGAGACGCCCCTGGA 61.379 66.667 0.00 0.00 0.00 3.86
99 100 3.379445 TTCGAGACGCCCCTGGAC 61.379 66.667 0.00 0.00 0.00 4.02
100 101 4.671590 TCGAGACGCCCCTGGACA 62.672 66.667 0.00 0.00 0.00 4.02
101 102 4.436998 CGAGACGCCCCTGGACAC 62.437 72.222 0.00 0.00 0.00 3.67
102 103 3.311110 GAGACGCCCCTGGACACA 61.311 66.667 0.00 0.00 0.00 3.72
103 104 2.607750 AGACGCCCCTGGACACAT 60.608 61.111 0.00 0.00 0.00 3.21
104 105 2.125106 GACGCCCCTGGACACATC 60.125 66.667 0.00 0.00 0.00 3.06
105 106 2.607750 ACGCCCCTGGACACATCT 60.608 61.111 0.00 0.00 0.00 2.90
106 107 1.305802 ACGCCCCTGGACACATCTA 60.306 57.895 0.00 0.00 0.00 1.98
107 108 1.144057 CGCCCCTGGACACATCTAC 59.856 63.158 0.00 0.00 0.00 2.59
108 109 1.144057 GCCCCTGGACACATCTACG 59.856 63.158 0.00 0.00 0.00 3.51
109 110 1.823295 CCCCTGGACACATCTACGG 59.177 63.158 0.00 0.00 0.00 4.02
110 111 0.976073 CCCCTGGACACATCTACGGT 60.976 60.000 0.00 0.00 0.00 4.83
111 112 1.687054 CCCCTGGACACATCTACGGTA 60.687 57.143 0.00 0.00 0.00 4.02
112 113 2.317040 CCCTGGACACATCTACGGTAT 58.683 52.381 0.00 0.00 0.00 2.73
113 114 3.493334 CCCTGGACACATCTACGGTATA 58.507 50.000 0.00 0.00 0.00 1.47
114 115 4.087182 CCCTGGACACATCTACGGTATAT 58.913 47.826 0.00 0.00 0.00 0.86
115 116 4.082190 CCCTGGACACATCTACGGTATATG 60.082 50.000 10.86 10.86 0.00 1.78
116 117 4.765339 CCTGGACACATCTACGGTATATGA 59.235 45.833 17.33 0.02 0.00 2.15
117 118 5.243060 CCTGGACACATCTACGGTATATGAA 59.757 44.000 17.33 1.30 0.00 2.57
118 119 6.080648 TGGACACATCTACGGTATATGAAC 57.919 41.667 17.33 9.31 0.00 3.18
119 120 5.831525 TGGACACATCTACGGTATATGAACT 59.168 40.000 17.33 2.66 0.00 3.01
120 121 6.016527 TGGACACATCTACGGTATATGAACTC 60.017 42.308 17.33 9.46 0.00 3.01
121 122 5.998553 ACACATCTACGGTATATGAACTCG 58.001 41.667 17.33 5.74 0.00 4.18
122 123 5.761726 ACACATCTACGGTATATGAACTCGA 59.238 40.000 17.33 0.00 0.00 4.04
123 124 6.430308 ACACATCTACGGTATATGAACTCGAT 59.570 38.462 17.33 0.00 0.00 3.59
124 125 6.962116 CACATCTACGGTATATGAACTCGATC 59.038 42.308 17.33 0.00 0.00 3.69
125 126 6.653740 ACATCTACGGTATATGAACTCGATCA 59.346 38.462 17.33 0.00 0.00 2.92
126 127 7.174426 ACATCTACGGTATATGAACTCGATCAA 59.826 37.037 17.33 0.00 32.06 2.57
127 128 7.683437 TCTACGGTATATGAACTCGATCAAT 57.317 36.000 0.00 0.00 32.06 2.57
128 129 8.107399 TCTACGGTATATGAACTCGATCAATT 57.893 34.615 0.00 0.00 32.06 2.32
129 130 8.235226 TCTACGGTATATGAACTCGATCAATTC 58.765 37.037 0.00 0.00 32.06 2.17
130 131 6.982852 ACGGTATATGAACTCGATCAATTCT 58.017 36.000 0.00 0.00 32.06 2.40
131 132 6.863645 ACGGTATATGAACTCGATCAATTCTG 59.136 38.462 0.00 0.00 32.06 3.02
132 133 6.863645 CGGTATATGAACTCGATCAATTCTGT 59.136 38.462 0.00 0.00 32.06 3.41
133 134 7.382488 CGGTATATGAACTCGATCAATTCTGTT 59.618 37.037 0.00 0.00 32.06 3.16
134 135 8.491152 GGTATATGAACTCGATCAATTCTGTTG 58.509 37.037 0.00 0.00 32.06 3.33
135 136 5.808042 ATGAACTCGATCAATTCTGTTGG 57.192 39.130 0.00 0.00 32.06 3.77
136 137 4.893608 TGAACTCGATCAATTCTGTTGGA 58.106 39.130 0.00 0.00 0.00 3.53
137 138 4.931601 TGAACTCGATCAATTCTGTTGGAG 59.068 41.667 0.00 0.00 34.79 3.86
138 139 4.808414 ACTCGATCAATTCTGTTGGAGA 57.192 40.909 0.00 0.00 33.58 3.71
139 140 5.350504 ACTCGATCAATTCTGTTGGAGAT 57.649 39.130 0.00 0.00 33.58 2.75
140 141 5.114780 ACTCGATCAATTCTGTTGGAGATG 58.885 41.667 0.00 0.00 33.58 2.90
141 142 3.873361 TCGATCAATTCTGTTGGAGATGC 59.127 43.478 0.00 0.00 0.00 3.91
142 143 3.302935 CGATCAATTCTGTTGGAGATGCG 60.303 47.826 0.00 0.00 0.00 4.73
143 144 3.057969 TCAATTCTGTTGGAGATGCGT 57.942 42.857 0.00 0.00 0.00 5.24
144 145 3.411446 TCAATTCTGTTGGAGATGCGTT 58.589 40.909 0.00 0.00 0.00 4.84
145 146 3.189080 TCAATTCTGTTGGAGATGCGTTG 59.811 43.478 0.00 0.00 0.00 4.10
146 147 2.254546 TTCTGTTGGAGATGCGTTGT 57.745 45.000 0.00 0.00 0.00 3.32
147 148 3.394674 TTCTGTTGGAGATGCGTTGTA 57.605 42.857 0.00 0.00 0.00 2.41
148 149 2.683968 TCTGTTGGAGATGCGTTGTAC 58.316 47.619 0.00 0.00 0.00 2.90
149 150 2.036604 TCTGTTGGAGATGCGTTGTACA 59.963 45.455 0.00 0.00 0.00 2.90
150 151 2.139917 TGTTGGAGATGCGTTGTACAC 58.860 47.619 0.00 0.00 0.00 2.90
151 152 2.139917 GTTGGAGATGCGTTGTACACA 58.860 47.619 0.00 0.00 0.00 3.72
152 153 2.535012 TGGAGATGCGTTGTACACAA 57.465 45.000 0.00 0.00 0.00 3.33
153 154 2.412870 TGGAGATGCGTTGTACACAAG 58.587 47.619 0.00 0.00 36.39 3.16
154 155 2.036604 TGGAGATGCGTTGTACACAAGA 59.963 45.455 0.00 0.00 36.39 3.02
155 156 3.064207 GGAGATGCGTTGTACACAAGAA 58.936 45.455 0.00 0.00 36.39 2.52
156 157 3.123621 GGAGATGCGTTGTACACAAGAAG 59.876 47.826 0.00 0.00 36.39 2.85
157 158 2.480419 AGATGCGTTGTACACAAGAAGC 59.520 45.455 0.00 0.00 36.39 3.86
158 159 1.657822 TGCGTTGTACACAAGAAGCA 58.342 45.000 12.74 12.74 38.59 3.91
159 160 1.597195 TGCGTTGTACACAAGAAGCAG 59.403 47.619 12.74 0.00 37.17 4.24
160 161 1.864711 GCGTTGTACACAAGAAGCAGA 59.135 47.619 0.00 0.00 36.39 4.26
161 162 2.348591 GCGTTGTACACAAGAAGCAGAC 60.349 50.000 0.00 0.00 36.39 3.51
162 163 2.863740 CGTTGTACACAAGAAGCAGACA 59.136 45.455 0.00 0.00 36.39 3.41
163 164 3.060272 CGTTGTACACAAGAAGCAGACAG 60.060 47.826 0.00 0.00 36.39 3.51
164 165 4.119862 GTTGTACACAAGAAGCAGACAGA 58.880 43.478 0.00 0.00 36.39 3.41
165 166 3.982475 TGTACACAAGAAGCAGACAGAG 58.018 45.455 0.00 0.00 0.00 3.35
166 167 3.636764 TGTACACAAGAAGCAGACAGAGA 59.363 43.478 0.00 0.00 0.00 3.10
167 168 3.383620 ACACAAGAAGCAGACAGAGAG 57.616 47.619 0.00 0.00 0.00 3.20
168 169 2.961741 ACACAAGAAGCAGACAGAGAGA 59.038 45.455 0.00 0.00 0.00 3.10
169 170 3.243704 ACACAAGAAGCAGACAGAGAGAC 60.244 47.826 0.00 0.00 0.00 3.36
170 171 2.961741 ACAAGAAGCAGACAGAGAGACA 59.038 45.455 0.00 0.00 0.00 3.41
171 172 3.005684 ACAAGAAGCAGACAGAGAGACAG 59.994 47.826 0.00 0.00 0.00 3.51
172 173 2.170166 AGAAGCAGACAGAGAGACAGG 58.830 52.381 0.00 0.00 0.00 4.00
173 174 1.892474 GAAGCAGACAGAGAGACAGGT 59.108 52.381 0.00 0.00 0.00 4.00
174 175 1.255882 AGCAGACAGAGAGACAGGTG 58.744 55.000 0.00 0.00 0.00 4.00
175 176 0.246086 GCAGACAGAGAGACAGGTGG 59.754 60.000 0.00 0.00 0.00 4.61
176 177 1.916506 CAGACAGAGAGACAGGTGGA 58.083 55.000 0.00 0.00 0.00 4.02
177 178 2.455557 CAGACAGAGAGACAGGTGGAT 58.544 52.381 0.00 0.00 0.00 3.41
178 179 2.830923 CAGACAGAGAGACAGGTGGATT 59.169 50.000 0.00 0.00 0.00 3.01
179 180 2.830923 AGACAGAGAGACAGGTGGATTG 59.169 50.000 0.00 0.00 0.00 2.67
180 181 2.828520 GACAGAGAGACAGGTGGATTGA 59.171 50.000 0.00 0.00 0.00 2.57
181 182 3.448934 ACAGAGAGACAGGTGGATTGAT 58.551 45.455 0.00 0.00 0.00 2.57
182 183 3.843027 ACAGAGAGACAGGTGGATTGATT 59.157 43.478 0.00 0.00 0.00 2.57
183 184 4.190001 CAGAGAGACAGGTGGATTGATTG 58.810 47.826 0.00 0.00 0.00 2.67
184 185 3.843027 AGAGAGACAGGTGGATTGATTGT 59.157 43.478 0.00 0.00 0.00 2.71
185 186 4.288105 AGAGAGACAGGTGGATTGATTGTT 59.712 41.667 0.00 0.00 0.00 2.83
186 187 5.485353 AGAGAGACAGGTGGATTGATTGTTA 59.515 40.000 0.00 0.00 0.00 2.41
187 188 5.491982 AGAGACAGGTGGATTGATTGTTAC 58.508 41.667 0.00 0.00 0.00 2.50
188 189 4.253685 AGACAGGTGGATTGATTGTTACG 58.746 43.478 0.00 0.00 0.00 3.18
189 190 4.000988 GACAGGTGGATTGATTGTTACGT 58.999 43.478 0.00 0.00 0.00 3.57
190 191 4.000988 ACAGGTGGATTGATTGTTACGTC 58.999 43.478 0.00 0.00 0.00 4.34
191 192 4.000325 CAGGTGGATTGATTGTTACGTCA 59.000 43.478 0.00 0.00 0.00 4.35
192 193 4.454161 CAGGTGGATTGATTGTTACGTCAA 59.546 41.667 0.00 5.68 38.57 3.18
193 194 4.454504 AGGTGGATTGATTGTTACGTCAAC 59.545 41.667 0.00 0.00 37.19 3.18
194 195 4.454504 GGTGGATTGATTGTTACGTCAACT 59.545 41.667 0.00 0.00 37.19 3.16
195 196 5.640357 GGTGGATTGATTGTTACGTCAACTA 59.360 40.000 0.00 0.00 37.19 2.24
196 197 6.401796 GGTGGATTGATTGTTACGTCAACTAC 60.402 42.308 0.00 7.49 37.19 2.73
197 198 6.367969 GTGGATTGATTGTTACGTCAACTACT 59.632 38.462 0.00 0.00 37.19 2.57
198 199 7.543172 GTGGATTGATTGTTACGTCAACTACTA 59.457 37.037 0.00 0.00 37.19 1.82
199 200 7.758076 TGGATTGATTGTTACGTCAACTACTAG 59.242 37.037 0.00 0.00 37.19 2.57
200 201 7.758528 GGATTGATTGTTACGTCAACTACTAGT 59.241 37.037 0.00 0.00 37.19 2.57
201 202 9.778993 GATTGATTGTTACGTCAACTACTAGTA 57.221 33.333 1.89 1.89 37.19 1.82
202 203 8.955061 TTGATTGTTACGTCAACTACTAGTAC 57.045 34.615 0.00 0.00 38.05 2.73
203 204 8.098220 TGATTGTTACGTCAACTACTAGTACA 57.902 34.615 0.00 0.00 38.05 2.90
204 205 8.733458 TGATTGTTACGTCAACTACTAGTACAT 58.267 33.333 0.00 0.00 38.05 2.29
205 206 8.906636 ATTGTTACGTCAACTACTAGTACATG 57.093 34.615 0.00 1.37 38.05 3.21
206 207 6.317088 TGTTACGTCAACTACTAGTACATGC 58.683 40.000 0.00 0.00 38.05 4.06
207 208 6.072563 TGTTACGTCAACTACTAGTACATGCA 60.073 38.462 0.00 0.00 38.05 3.96
208 209 4.730657 ACGTCAACTACTAGTACATGCAC 58.269 43.478 0.00 0.00 0.00 4.57
209 210 3.784468 CGTCAACTACTAGTACATGCACG 59.216 47.826 0.00 8.83 0.00 5.34
210 211 4.670992 CGTCAACTACTAGTACATGCACGT 60.671 45.833 0.00 0.00 0.00 4.49
211 212 5.446340 CGTCAACTACTAGTACATGCACGTA 60.446 44.000 0.00 0.00 0.00 3.57
212 213 5.964168 GTCAACTACTAGTACATGCACGTAG 59.036 44.000 0.00 8.70 0.00 3.51
213 214 5.876460 TCAACTACTAGTACATGCACGTAGA 59.124 40.000 14.52 0.00 0.00 2.59
214 215 6.372381 TCAACTACTAGTACATGCACGTAGAA 59.628 38.462 14.52 0.00 0.00 2.10
215 216 6.748333 ACTACTAGTACATGCACGTAGAAA 57.252 37.500 14.52 2.52 0.00 2.52
216 217 7.149569 ACTACTAGTACATGCACGTAGAAAA 57.850 36.000 14.52 0.85 0.00 2.29
217 218 7.596494 ACTACTAGTACATGCACGTAGAAAAA 58.404 34.615 14.52 0.00 0.00 1.94
218 219 6.701432 ACTAGTACATGCACGTAGAAAAAC 57.299 37.500 0.00 0.00 0.00 2.43
219 220 5.636543 ACTAGTACATGCACGTAGAAAAACC 59.363 40.000 0.00 0.00 0.00 3.27
220 221 4.382291 AGTACATGCACGTAGAAAAACCA 58.618 39.130 0.00 0.00 0.00 3.67
221 222 3.896648 ACATGCACGTAGAAAAACCAG 57.103 42.857 0.00 0.00 0.00 4.00
222 223 2.031157 ACATGCACGTAGAAAAACCAGC 60.031 45.455 0.00 0.00 0.00 4.85
223 224 0.584396 TGCACGTAGAAAAACCAGCG 59.416 50.000 0.00 0.00 0.00 5.18
224 225 0.584876 GCACGTAGAAAAACCAGCGT 59.415 50.000 0.00 0.00 0.00 5.07
225 226 2.294479 CACGTAGAAAAACCAGCGTG 57.706 50.000 0.00 0.00 42.39 5.34
226 227 1.595794 CACGTAGAAAAACCAGCGTGT 59.404 47.619 0.00 0.00 42.86 4.49
227 228 1.862827 ACGTAGAAAAACCAGCGTGTC 59.137 47.619 0.00 0.00 0.00 3.67
228 229 1.136721 CGTAGAAAAACCAGCGTGTCG 60.137 52.381 0.00 0.00 0.00 4.35
229 230 1.862827 GTAGAAAAACCAGCGTGTCGT 59.137 47.619 0.00 0.00 0.00 4.34
230 231 1.375551 AGAAAAACCAGCGTGTCGTT 58.624 45.000 0.00 0.00 0.00 3.85
231 232 1.329599 AGAAAAACCAGCGTGTCGTTC 59.670 47.619 0.00 0.00 0.00 3.95
232 233 0.027063 AAAAACCAGCGTGTCGTTCG 59.973 50.000 0.00 0.00 0.00 3.95
233 234 1.085501 AAAACCAGCGTGTCGTTCGT 61.086 50.000 0.00 0.00 0.00 3.85
234 235 1.758319 AAACCAGCGTGTCGTTCGTG 61.758 55.000 0.00 0.00 0.00 4.35
235 236 2.657296 CCAGCGTGTCGTTCGTGT 60.657 61.111 0.00 0.00 0.00 4.49
236 237 2.645510 CCAGCGTGTCGTTCGTGTC 61.646 63.158 0.00 0.00 0.00 3.67
237 238 1.657487 CAGCGTGTCGTTCGTGTCT 60.657 57.895 0.00 0.00 0.00 3.41
238 239 1.065273 AGCGTGTCGTTCGTGTCTT 59.935 52.632 0.00 0.00 0.00 3.01
239 240 1.198397 GCGTGTCGTTCGTGTCTTG 59.802 57.895 0.00 0.00 0.00 3.02
240 241 1.844003 CGTGTCGTTCGTGTCTTGG 59.156 57.895 0.00 0.00 0.00 3.61
241 242 0.868602 CGTGTCGTTCGTGTCTTGGT 60.869 55.000 0.00 0.00 0.00 3.67
242 243 0.850856 GTGTCGTTCGTGTCTTGGTC 59.149 55.000 0.00 0.00 0.00 4.02
243 244 0.456628 TGTCGTTCGTGTCTTGGTCA 59.543 50.000 0.00 0.00 0.00 4.02
244 245 0.850856 GTCGTTCGTGTCTTGGTCAC 59.149 55.000 0.00 0.00 0.00 3.67
245 246 0.249155 TCGTTCGTGTCTTGGTCACC 60.249 55.000 0.00 0.00 32.86 4.02
246 247 1.545614 CGTTCGTGTCTTGGTCACCG 61.546 60.000 0.00 0.00 32.86 4.94
247 248 1.593209 TTCGTGTCTTGGTCACCGC 60.593 57.895 0.00 0.00 32.86 5.68
248 249 2.981977 TTCGTGTCTTGGTCACCGCC 62.982 60.000 0.00 0.00 32.86 6.13
249 250 3.041940 GTGTCTTGGTCACCGCCG 61.042 66.667 0.00 0.00 0.00 6.46
250 251 3.228017 TGTCTTGGTCACCGCCGA 61.228 61.111 0.00 0.00 0.00 5.54
251 252 2.432628 GTCTTGGTCACCGCCGAG 60.433 66.667 0.00 0.00 40.61 4.63
252 253 4.373116 TCTTGGTCACCGCCGAGC 62.373 66.667 0.00 0.00 39.39 5.03
253 254 4.379243 CTTGGTCACCGCCGAGCT 62.379 66.667 0.00 0.00 33.64 4.09
254 255 4.373116 TTGGTCACCGCCGAGCTC 62.373 66.667 2.73 2.73 34.46 4.09
266 267 4.593864 GAGCTCGCCATCCCGGTC 62.594 72.222 0.00 0.00 36.97 4.79
269 270 3.461773 CTCGCCATCCCGGTCACT 61.462 66.667 0.00 0.00 36.97 3.41
270 271 2.043752 TCGCCATCCCGGTCACTA 60.044 61.111 0.00 0.00 36.97 2.74
271 272 1.456892 TCGCCATCCCGGTCACTAT 60.457 57.895 0.00 0.00 36.97 2.12
272 273 0.178984 TCGCCATCCCGGTCACTATA 60.179 55.000 0.00 0.00 36.97 1.31
273 274 0.038526 CGCCATCCCGGTCACTATAC 60.039 60.000 0.00 0.00 36.97 1.47
274 275 1.339097 GCCATCCCGGTCACTATACT 58.661 55.000 0.00 0.00 36.97 2.12
275 276 2.522185 GCCATCCCGGTCACTATACTA 58.478 52.381 0.00 0.00 36.97 1.82
276 277 3.097614 GCCATCCCGGTCACTATACTAT 58.902 50.000 0.00 0.00 36.97 2.12
277 278 3.514309 GCCATCCCGGTCACTATACTATT 59.486 47.826 0.00 0.00 36.97 1.73
278 279 4.381718 GCCATCCCGGTCACTATACTATTC 60.382 50.000 0.00 0.00 36.97 1.75
279 280 4.159879 CCATCCCGGTCACTATACTATTCC 59.840 50.000 0.00 0.00 0.00 3.01
280 281 4.736611 TCCCGGTCACTATACTATTCCT 57.263 45.455 0.00 0.00 0.00 3.36
281 282 4.660168 TCCCGGTCACTATACTATTCCTC 58.340 47.826 0.00 0.00 0.00 3.71
282 283 4.353191 TCCCGGTCACTATACTATTCCTCT 59.647 45.833 0.00 0.00 0.00 3.69
283 284 4.701171 CCCGGTCACTATACTATTCCTCTC 59.299 50.000 0.00 0.00 0.00 3.20
284 285 5.515184 CCCGGTCACTATACTATTCCTCTCT 60.515 48.000 0.00 0.00 0.00 3.10
285 286 6.296317 CCCGGTCACTATACTATTCCTCTCTA 60.296 46.154 0.00 0.00 0.00 2.43
286 287 7.166851 CCGGTCACTATACTATTCCTCTCTAA 58.833 42.308 0.00 0.00 0.00 2.10
287 288 7.119553 CCGGTCACTATACTATTCCTCTCTAAC 59.880 44.444 0.00 0.00 0.00 2.34
288 289 7.879160 CGGTCACTATACTATTCCTCTCTAACT 59.121 40.741 0.00 0.00 0.00 2.24
289 290 9.577222 GGTCACTATACTATTCCTCTCTAACTT 57.423 37.037 0.00 0.00 0.00 2.66
296 297 7.102847 ACTATTCCTCTCTAACTTGTACAGC 57.897 40.000 0.00 0.00 0.00 4.40
297 298 6.893005 ACTATTCCTCTCTAACTTGTACAGCT 59.107 38.462 0.00 0.00 0.00 4.24
298 299 5.646577 TTCCTCTCTAACTTGTACAGCTC 57.353 43.478 0.00 0.00 0.00 4.09
299 300 3.690139 TCCTCTCTAACTTGTACAGCTCG 59.310 47.826 0.00 0.00 0.00 5.03
300 301 3.430931 CTCTCTAACTTGTACAGCTCGC 58.569 50.000 0.00 0.00 0.00 5.03
301 302 3.082548 TCTCTAACTTGTACAGCTCGCT 58.917 45.455 0.00 0.00 0.00 4.93
310 311 2.433838 CAGCTCGCTGTCCCAGTG 60.434 66.667 10.65 0.00 42.60 3.66
311 312 3.699894 AGCTCGCTGTCCCAGTGG 61.700 66.667 0.63 0.63 41.68 4.00
312 313 4.008933 GCTCGCTGTCCCAGTGGT 62.009 66.667 8.74 0.00 41.68 4.16
313 314 2.743718 CTCGCTGTCCCAGTGGTT 59.256 61.111 8.74 0.00 41.68 3.67
314 315 1.071471 CTCGCTGTCCCAGTGGTTT 59.929 57.895 8.74 0.00 41.68 3.27
315 316 0.535102 CTCGCTGTCCCAGTGGTTTT 60.535 55.000 8.74 0.00 41.68 2.43
316 317 0.534203 TCGCTGTCCCAGTGGTTTTC 60.534 55.000 8.74 0.00 41.68 2.29
317 318 1.515521 CGCTGTCCCAGTGGTTTTCC 61.516 60.000 8.74 0.00 38.21 3.13
318 319 0.467290 GCTGTCCCAGTGGTTTTCCA 60.467 55.000 8.74 0.00 38.67 3.53
331 332 4.792068 TGGTTTTCCAGTCTTCAGATTGT 58.208 39.130 0.00 0.00 46.22 2.71
332 333 4.580167 TGGTTTTCCAGTCTTCAGATTGTG 59.420 41.667 0.00 0.00 46.22 3.33
333 334 4.821805 GGTTTTCCAGTCTTCAGATTGTGA 59.178 41.667 0.00 0.00 40.31 3.58
334 335 5.474876 GGTTTTCCAGTCTTCAGATTGTGAT 59.525 40.000 0.00 0.00 40.31 3.06
335 336 6.348868 GGTTTTCCAGTCTTCAGATTGTGATC 60.349 42.308 0.00 0.00 40.31 2.92
336 337 5.488262 TTCCAGTCTTCAGATTGTGATCA 57.512 39.130 0.00 0.00 34.17 2.92
337 338 4.825422 TCCAGTCTTCAGATTGTGATCAC 58.175 43.478 19.27 19.27 34.17 3.06
338 339 4.529769 TCCAGTCTTCAGATTGTGATCACT 59.470 41.667 25.55 7.38 34.17 3.41
339 340 4.630505 CCAGTCTTCAGATTGTGATCACTG 59.369 45.833 25.55 15.69 41.18 3.66
340 341 4.630505 CAGTCTTCAGATTGTGATCACTGG 59.369 45.833 25.55 11.00 39.48 4.00
341 342 4.529769 AGTCTTCAGATTGTGATCACTGGA 59.470 41.667 25.55 10.16 34.17 3.86
342 343 4.869297 GTCTTCAGATTGTGATCACTGGAG 59.131 45.833 25.55 18.57 37.34 3.86
343 344 4.529769 TCTTCAGATTGTGATCACTGGAGT 59.470 41.667 25.55 3.40 37.30 3.85
344 345 4.462508 TCAGATTGTGATCACTGGAGTC 57.537 45.455 25.55 12.30 34.60 3.36
345 346 3.834231 TCAGATTGTGATCACTGGAGTCA 59.166 43.478 25.55 1.47 34.60 3.41
346 347 4.468868 TCAGATTGTGATCACTGGAGTCAT 59.531 41.667 25.55 7.15 34.60 3.06
347 348 4.571176 CAGATTGTGATCACTGGAGTCATG 59.429 45.833 25.55 10.28 34.60 3.07
348 349 4.468868 AGATTGTGATCACTGGAGTCATGA 59.531 41.667 25.55 0.00 34.60 3.07
349 350 4.622260 TTGTGATCACTGGAGTCATGAA 57.378 40.909 25.55 5.69 0.00 2.57
350 351 4.831674 TGTGATCACTGGAGTCATGAAT 57.168 40.909 25.55 0.00 0.00 2.57
351 352 5.169992 TGTGATCACTGGAGTCATGAATT 57.830 39.130 25.55 0.00 0.00 2.17
352 353 5.563592 TGTGATCACTGGAGTCATGAATTT 58.436 37.500 25.55 0.00 0.00 1.82
353 354 6.005823 TGTGATCACTGGAGTCATGAATTTT 58.994 36.000 25.55 0.00 0.00 1.82
354 355 6.149973 TGTGATCACTGGAGTCATGAATTTTC 59.850 38.462 25.55 0.00 0.00 2.29
355 356 5.649395 TGATCACTGGAGTCATGAATTTTCC 59.351 40.000 0.00 3.47 0.00 3.13
356 357 4.984295 TCACTGGAGTCATGAATTTTCCA 58.016 39.130 14.94 14.94 36.55 3.53
357 358 5.573219 TCACTGGAGTCATGAATTTTCCAT 58.427 37.500 15.69 7.45 37.32 3.41
358 359 5.649395 TCACTGGAGTCATGAATTTTCCATC 59.351 40.000 15.69 0.00 37.32 3.51
359 360 5.651139 CACTGGAGTCATGAATTTTCCATCT 59.349 40.000 15.69 0.00 37.32 2.90
360 361 6.152323 CACTGGAGTCATGAATTTTCCATCTT 59.848 38.462 15.69 5.52 37.32 2.40
361 362 7.337689 CACTGGAGTCATGAATTTTCCATCTTA 59.662 37.037 15.69 0.00 37.32 2.10
362 363 7.890127 ACTGGAGTCATGAATTTTCCATCTTAA 59.110 33.333 15.69 0.00 37.32 1.85
363 364 8.827832 TGGAGTCATGAATTTTCCATCTTAAT 57.172 30.769 12.82 0.00 33.21 1.40
364 365 8.906867 TGGAGTCATGAATTTTCCATCTTAATC 58.093 33.333 12.82 0.00 33.21 1.75
365 366 9.129532 GGAGTCATGAATTTTCCATCTTAATCT 57.870 33.333 0.00 0.00 0.00 2.40
368 369 9.525409 GTCATGAATTTTCCATCTTAATCTTGG 57.475 33.333 0.00 0.00 0.00 3.61
369 370 8.698210 TCATGAATTTTCCATCTTAATCTTGGG 58.302 33.333 0.00 0.00 0.00 4.12
370 371 8.480501 CATGAATTTTCCATCTTAATCTTGGGT 58.519 33.333 0.00 0.00 0.00 4.51
371 372 8.066612 TGAATTTTCCATCTTAATCTTGGGTC 57.933 34.615 0.00 0.00 0.00 4.46
372 373 6.699575 ATTTTCCATCTTAATCTTGGGTCG 57.300 37.500 0.00 0.00 0.00 4.79
373 374 3.838244 TCCATCTTAATCTTGGGTCGG 57.162 47.619 0.00 0.00 0.00 4.79
374 375 2.158813 TCCATCTTAATCTTGGGTCGGC 60.159 50.000 0.00 0.00 0.00 5.54
375 376 2.222027 CATCTTAATCTTGGGTCGGCC 58.778 52.381 0.00 0.00 0.00 6.13
376 377 1.580059 TCTTAATCTTGGGTCGGCCT 58.420 50.000 5.77 0.00 34.45 5.19
377 378 1.485066 TCTTAATCTTGGGTCGGCCTC 59.515 52.381 5.77 0.00 34.45 4.70
378 379 0.177141 TTAATCTTGGGTCGGCCTCG 59.823 55.000 5.77 0.00 37.82 4.63
379 380 0.974010 TAATCTTGGGTCGGCCTCGT 60.974 55.000 5.77 0.00 37.69 4.18
380 381 0.974010 AATCTTGGGTCGGCCTCGTA 60.974 55.000 5.77 0.00 37.69 3.43
381 382 0.759436 ATCTTGGGTCGGCCTCGTAT 60.759 55.000 5.77 0.00 37.69 3.06
382 383 0.106569 TCTTGGGTCGGCCTCGTATA 60.107 55.000 5.77 0.00 37.69 1.47
383 384 0.031721 CTTGGGTCGGCCTCGTATAC 59.968 60.000 5.77 0.00 37.69 1.47
384 385 1.394266 TTGGGTCGGCCTCGTATACC 61.394 60.000 5.77 0.00 37.69 2.73
385 386 2.568425 GGGTCGGCCTCGTATACCC 61.568 68.421 5.77 4.36 41.57 3.69
386 387 1.829533 GGTCGGCCTCGTATACCCA 60.830 63.158 0.00 0.00 37.69 4.51
387 388 1.394266 GGTCGGCCTCGTATACCCAA 61.394 60.000 0.00 0.00 37.69 4.12
388 389 0.677842 GTCGGCCTCGTATACCCAAT 59.322 55.000 0.00 0.00 37.69 3.16
389 390 0.677288 TCGGCCTCGTATACCCAATG 59.323 55.000 0.00 0.00 37.69 2.82
390 391 0.320421 CGGCCTCGTATACCCAATGG 60.320 60.000 0.00 0.00 37.80 3.16
401 402 1.379044 CCCAATGGGTCAGTGAGGC 60.379 63.158 10.91 0.00 38.25 4.70
402 403 1.379044 CCAATGGGTCAGTGAGGCC 60.379 63.158 0.00 0.00 43.09 5.19
403 404 1.379916 CAATGGGTCAGTGAGGCCA 59.620 57.895 5.01 0.00 46.80 5.36
404 405 0.033796 CAATGGGTCAGTGAGGCCAT 60.034 55.000 5.01 0.00 46.80 4.40
405 406 1.212688 CAATGGGTCAGTGAGGCCATA 59.787 52.381 5.01 0.00 46.80 2.74
406 407 1.595311 ATGGGTCAGTGAGGCCATAA 58.405 50.000 5.01 0.00 46.80 1.90
407 408 1.367346 TGGGTCAGTGAGGCCATAAA 58.633 50.000 5.01 0.00 46.80 1.40
408 409 1.922447 TGGGTCAGTGAGGCCATAAAT 59.078 47.619 5.01 0.00 46.80 1.40
409 410 2.311542 TGGGTCAGTGAGGCCATAAATT 59.688 45.455 5.01 0.00 46.80 1.82
410 411 3.245586 TGGGTCAGTGAGGCCATAAATTT 60.246 43.478 5.01 0.00 46.80 1.82
411 412 3.769300 GGGTCAGTGAGGCCATAAATTTT 59.231 43.478 5.01 0.00 46.80 1.82
412 413 4.222810 GGGTCAGTGAGGCCATAAATTTTT 59.777 41.667 5.01 0.00 46.80 1.94
413 414 5.170748 GGTCAGTGAGGCCATAAATTTTTG 58.829 41.667 5.01 0.00 43.39 2.44
414 415 5.047377 GGTCAGTGAGGCCATAAATTTTTGA 60.047 40.000 5.01 0.00 43.39 2.69
415 416 6.351286 GGTCAGTGAGGCCATAAATTTTTGAT 60.351 38.462 5.01 0.00 43.39 2.57
416 417 6.532657 GTCAGTGAGGCCATAAATTTTTGATG 59.467 38.462 5.01 1.83 0.00 3.07
417 418 6.436847 TCAGTGAGGCCATAAATTTTTGATGA 59.563 34.615 5.01 1.41 0.00 2.92
418 419 7.039152 TCAGTGAGGCCATAAATTTTTGATGAA 60.039 33.333 5.01 0.00 0.00 2.57
419 420 7.603404 CAGTGAGGCCATAAATTTTTGATGAAA 59.397 33.333 5.01 0.00 0.00 2.69
420 421 8.323567 AGTGAGGCCATAAATTTTTGATGAAAT 58.676 29.630 5.01 0.00 0.00 2.17
421 422 8.392612 GTGAGGCCATAAATTTTTGATGAAATG 58.607 33.333 5.01 0.00 30.06 2.32
422 423 7.553402 TGAGGCCATAAATTTTTGATGAAATGG 59.447 33.333 5.01 8.66 30.06 3.16
423 424 6.829811 AGGCCATAAATTTTTGATGAAATGGG 59.170 34.615 5.01 0.00 30.06 4.00
424 425 6.602803 GGCCATAAATTTTTGATGAAATGGGT 59.397 34.615 9.87 0.00 30.06 4.51
425 426 7.122501 GGCCATAAATTTTTGATGAAATGGGTT 59.877 33.333 9.87 0.00 30.06 4.11
426 427 7.969508 GCCATAAATTTTTGATGAAATGGGTTG 59.030 33.333 9.87 0.00 30.06 3.77
427 428 9.228949 CCATAAATTTTTGATGAAATGGGTTGA 57.771 29.630 9.87 0.00 30.06 3.18
429 430 7.509141 AAATTTTTGATGAAATGGGTTGACC 57.491 32.000 0.00 0.00 40.81 4.02
439 440 2.763215 GGTTGACCCATGGCCTCA 59.237 61.111 6.09 6.22 0.00 3.86
440 441 1.678970 GGTTGACCCATGGCCTCAC 60.679 63.158 6.09 0.00 0.00 3.51
441 442 1.074775 GTTGACCCATGGCCTCACA 59.925 57.895 6.09 0.00 0.00 3.58
442 443 0.323725 GTTGACCCATGGCCTCACAT 60.324 55.000 6.09 0.00 0.00 3.21
443 444 1.064758 GTTGACCCATGGCCTCACATA 60.065 52.381 6.09 0.00 0.00 2.29
444 445 1.521764 TGACCCATGGCCTCACATAT 58.478 50.000 6.09 0.00 0.00 1.78
445 446 1.852309 TGACCCATGGCCTCACATATT 59.148 47.619 6.09 0.00 0.00 1.28
446 447 2.233271 GACCCATGGCCTCACATATTG 58.767 52.381 6.09 0.00 0.00 1.90
447 448 1.852309 ACCCATGGCCTCACATATTGA 59.148 47.619 6.09 0.00 0.00 2.57
448 449 2.233271 CCCATGGCCTCACATATTGAC 58.767 52.381 6.09 0.00 0.00 3.18
449 450 2.233271 CCATGGCCTCACATATTGACC 58.767 52.381 3.32 0.00 0.00 4.02
450 451 2.158564 CCATGGCCTCACATATTGACCT 60.159 50.000 3.32 0.00 0.00 3.85
451 452 3.559069 CATGGCCTCACATATTGACCTT 58.441 45.455 3.32 0.00 0.00 3.50
452 453 3.003394 TGGCCTCACATATTGACCTTG 57.997 47.619 3.32 0.00 0.00 3.61
453 454 2.301346 GGCCTCACATATTGACCTTGG 58.699 52.381 0.00 0.00 0.00 3.61
454 455 2.301346 GCCTCACATATTGACCTTGGG 58.699 52.381 0.00 0.00 0.00 4.12
455 456 2.936202 CCTCACATATTGACCTTGGGG 58.064 52.381 0.00 0.00 38.88 4.96
456 457 2.301346 CTCACATATTGACCTTGGGGC 58.699 52.381 0.00 0.00 35.63 5.80
457 458 1.064017 TCACATATTGACCTTGGGGCC 60.064 52.381 0.00 0.00 35.63 5.80
458 459 1.006813 ACATATTGACCTTGGGGCCA 58.993 50.000 4.39 0.00 35.63 5.36
459 460 1.341976 ACATATTGACCTTGGGGCCAC 60.342 52.381 4.39 0.00 35.63 5.01
460 461 0.106719 ATATTGACCTTGGGGCCACG 60.107 55.000 4.39 0.00 35.63 4.94
461 462 2.204865 TATTGACCTTGGGGCCACGG 62.205 60.000 4.39 0.00 40.66 4.94
481 482 4.506255 CCAGGTCCGGGCCATTCC 62.506 72.222 30.48 8.15 0.00 3.01
513 514 7.288389 TGAATTATCTTGCCCAGATGCTAAATT 59.712 33.333 5.88 4.26 42.76 1.82
514 515 6.639632 TTATCTTGCCCAGATGCTAAATTC 57.360 37.500 5.88 0.00 42.76 2.17
517 518 5.018809 TCTTGCCCAGATGCTAAATTCTTT 58.981 37.500 0.00 0.00 0.00 2.52
518 519 4.724074 TGCCCAGATGCTAAATTCTTTG 57.276 40.909 0.00 0.00 0.00 2.77
519 520 4.088634 TGCCCAGATGCTAAATTCTTTGT 58.911 39.130 0.00 0.00 0.00 2.83
520 521 4.527816 TGCCCAGATGCTAAATTCTTTGTT 59.472 37.500 0.00 0.00 0.00 2.83
521 522 5.714333 TGCCCAGATGCTAAATTCTTTGTTA 59.286 36.000 0.00 0.00 0.00 2.41
522 523 6.210385 TGCCCAGATGCTAAATTCTTTGTTAA 59.790 34.615 0.00 0.00 0.00 2.01
523 524 6.531594 GCCCAGATGCTAAATTCTTTGTTAAC 59.468 38.462 0.00 0.00 0.00 2.01
524 525 6.747280 CCCAGATGCTAAATTCTTTGTTAACG 59.253 38.462 0.26 0.00 0.00 3.18
525 526 7.361713 CCCAGATGCTAAATTCTTTGTTAACGA 60.362 37.037 0.26 0.00 0.00 3.85
526 527 7.693951 CCAGATGCTAAATTCTTTGTTAACGAG 59.306 37.037 0.26 1.93 0.00 4.18
548 549 9.136952 ACGAGTACTACACATCTTTGTTATTTC 57.863 33.333 0.00 0.00 32.34 2.17
586 587 1.133915 TCCCAGTTTGTTCCTCACCAC 60.134 52.381 0.00 0.00 0.00 4.16
587 588 1.318576 CCAGTTTGTTCCTCACCACC 58.681 55.000 0.00 0.00 0.00 4.61
592 593 0.257328 TTGTTCCTCACCACCTTGCA 59.743 50.000 0.00 0.00 0.00 4.08
605 606 1.912043 ACCTTGCAATGCTCCTAGTCT 59.088 47.619 6.82 0.00 0.00 3.24
618 619 4.497340 GCTCCTAGTCTCTGAATTCGACAG 60.497 50.000 12.60 3.93 36.80 3.51
628 629 2.548057 TGAATTCGACAGAAACCAGCAC 59.452 45.455 0.04 0.00 40.15 4.40
631 632 3.130351 ATTCGACAGAAACCAGCACTGG 61.130 50.000 15.23 15.23 46.11 4.00
699 700 9.423061 CGGATCATCTTTCCAAAAATAAAAGTT 57.577 29.630 0.00 0.00 32.94 2.66
761 808 4.449743 CCAGCCACTCAACATTTTCATTTG 59.550 41.667 0.00 0.00 0.00 2.32
802 861 4.096681 TGATGGAGCTCTAGAACTTTCCA 58.903 43.478 14.64 13.43 38.90 3.53
855 914 2.698797 TCAGAAGTTTCCGTCACCTTCT 59.301 45.455 0.00 0.00 43.23 2.85
909 996 1.705337 CCCGTCGCATCATCACCAAC 61.705 60.000 0.00 0.00 0.00 3.77
913 1000 1.061411 CGCATCATCACCAACGCAG 59.939 57.895 0.00 0.00 0.00 5.18
994 1091 1.299014 CTCGGAGATCAGCAGCGAC 60.299 63.158 0.00 0.00 33.89 5.19
1365 1468 4.724697 CGCAAGTTCGTGCTGCCG 62.725 66.667 8.76 0.19 42.62 5.69
1495 1598 4.010575 AGGTCGCCTGAGACTCTG 57.989 61.111 3.68 3.03 40.76 3.35
1496 1599 1.380689 AGGTCGCCTGAGACTCTGA 59.619 57.895 10.70 0.00 40.76 3.27
1497 1600 0.679640 AGGTCGCCTGAGACTCTGAG 60.680 60.000 10.70 2.45 40.76 3.35
1498 1601 0.678366 GGTCGCCTGAGACTCTGAGA 60.678 60.000 12.44 7.06 40.76 3.27
1514 1621 0.312416 GAGAGATGGATGGGACGACG 59.688 60.000 0.00 0.00 0.00 5.12
1517 1624 1.109920 AGATGGATGGGACGACGGAG 61.110 60.000 0.00 0.00 0.00 4.63
1537 1645 1.274712 CCAGAGAGAGGTCCTTTGCT 58.725 55.000 0.00 0.00 0.00 3.91
1611 1730 1.004595 CCTGAGATGCGTGATGTGTG 58.995 55.000 0.00 0.00 0.00 3.82
1665 1787 5.506815 CCGAGAGTGTTGTGTGACTAGTTTA 60.507 44.000 0.00 0.00 0.00 2.01
1666 1788 5.975344 CGAGAGTGTTGTGTGACTAGTTTAA 59.025 40.000 0.00 0.00 0.00 1.52
1675 1797 5.758296 TGTGTGACTAGTTTAAGCTTTCAGG 59.242 40.000 3.20 0.00 0.00 3.86
1735 1857 8.986477 ACTTTGGTTCATACTGAAATAATTGC 57.014 30.769 0.00 0.00 38.22 3.56
1736 1858 8.034804 ACTTTGGTTCATACTGAAATAATTGCC 58.965 33.333 0.00 0.00 38.22 4.52
1737 1859 7.716799 TTGGTTCATACTGAAATAATTGCCT 57.283 32.000 0.00 0.00 38.22 4.75
1770 1932 5.894298 ATATCTCAGTAATCTTGGTGGCA 57.106 39.130 0.00 0.00 0.00 4.92
1771 1933 3.616956 TCTCAGTAATCTTGGTGGCAG 57.383 47.619 0.00 0.00 0.00 4.85
1898 2062 6.038603 TGAAAAACAGAGTCACTGGATTTCAG 59.961 38.462 19.24 0.00 46.83 3.02
1994 2222 7.643569 TTGGATGTACATTTGCAAGATACAT 57.356 32.000 22.32 22.32 38.78 2.29
1997 2225 8.190122 TGGATGTACATTTGCAAGATACATTTC 58.810 33.333 22.71 19.21 36.77 2.17
2159 2695 6.116126 GGACCAAGCATCAGTTAGATTTAGT 58.884 40.000 0.00 0.00 33.72 2.24
2216 2754 8.603181 GTTCTTGTTCAAACATGTAAATTGCTT 58.397 29.630 0.00 0.00 38.95 3.91
2249 2787 8.154649 ACGCAATACTATTATTTCAAAGGAGG 57.845 34.615 0.00 0.00 0.00 4.30
2358 2896 9.674824 ATTTTCTTGATGAGATTGATTTATCGC 57.325 29.630 0.00 0.00 33.49 4.58
2394 2934 7.543868 AGTCAATCTCATGAAGAGTTTACTTCG 59.456 37.037 0.00 0.00 46.21 3.79
2441 2981 4.838986 ACCTACTCCAGTTTGTAGATGTGT 59.161 41.667 0.00 0.00 38.62 3.72
2473 3013 3.443099 TGATCTCATTGTCGCGATCTT 57.557 42.857 14.06 0.00 34.75 2.40
2484 3024 1.779025 CGCGATCTTCAAGGGCCATG 61.779 60.000 6.18 3.65 0.00 3.66
2485 3025 1.450531 GCGATCTTCAAGGGCCATGG 61.451 60.000 7.63 7.63 0.00 3.66
2486 3026 1.450531 CGATCTTCAAGGGCCATGGC 61.451 60.000 29.47 29.47 41.06 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.075005 ACCCGTCTGACCCATCGG 61.075 66.667 1.55 0.00 42.22 4.18
19 20 2.494918 GACCCGTCTGACCCATCG 59.505 66.667 1.55 0.00 0.00 3.84
20 21 2.050350 TCGACCCGTCTGACCCATC 61.050 63.158 1.55 0.00 0.00 3.51
21 22 2.036731 TCGACCCGTCTGACCCAT 59.963 61.111 1.55 0.00 0.00 4.00
22 23 2.987547 GTCGACCCGTCTGACCCA 60.988 66.667 3.51 0.00 31.70 4.51
23 24 3.756727 GGTCGACCCGTCTGACCC 61.757 72.222 24.75 0.00 42.20 4.46
37 38 0.030908 CCTAGCGATTCGACTGGGTC 59.969 60.000 10.88 0.00 31.48 4.46
38 39 2.017559 GCCTAGCGATTCGACTGGGT 62.018 60.000 23.19 0.43 35.50 4.51
39 40 1.300233 GCCTAGCGATTCGACTGGG 60.300 63.158 20.42 20.42 35.87 4.45
40 41 1.300233 GGCCTAGCGATTCGACTGG 60.300 63.158 10.88 8.35 0.00 4.00
41 42 1.300233 GGGCCTAGCGATTCGACTG 60.300 63.158 10.88 0.00 0.00 3.51
42 43 0.178998 TAGGGCCTAGCGATTCGACT 60.179 55.000 9.81 9.04 0.00 4.18
43 44 0.241481 CTAGGGCCTAGCGATTCGAC 59.759 60.000 26.79 1.21 0.00 4.20
44 45 0.178998 ACTAGGGCCTAGCGATTCGA 60.179 55.000 35.14 3.45 37.57 3.71
45 46 0.241481 GACTAGGGCCTAGCGATTCG 59.759 60.000 35.14 15.30 37.57 3.34
46 47 1.000052 GTGACTAGGGCCTAGCGATTC 60.000 57.143 35.14 25.74 37.57 2.52
47 48 1.041437 GTGACTAGGGCCTAGCGATT 58.959 55.000 35.14 19.41 37.57 3.34
48 49 0.186386 AGTGACTAGGGCCTAGCGAT 59.814 55.000 35.14 19.77 37.57 4.58
49 50 0.752009 CAGTGACTAGGGCCTAGCGA 60.752 60.000 35.14 21.58 37.57 4.93
50 51 1.736586 CAGTGACTAGGGCCTAGCG 59.263 63.158 35.14 18.13 37.57 4.26
51 52 1.045911 AGCAGTGACTAGGGCCTAGC 61.046 60.000 35.14 27.35 37.57 3.42
52 53 0.749649 CAGCAGTGACTAGGGCCTAG 59.250 60.000 33.93 33.93 39.72 3.02
53 54 0.687757 CCAGCAGTGACTAGGGCCTA 60.688 60.000 13.73 13.73 0.00 3.93
54 55 1.992277 CCAGCAGTGACTAGGGCCT 60.992 63.158 12.58 12.58 0.00 5.19
55 56 2.586792 CCAGCAGTGACTAGGGCC 59.413 66.667 0.00 0.00 0.00 5.80
56 57 2.124942 GCCAGCAGTGACTAGGGC 60.125 66.667 5.74 5.74 0.00 5.19
57 58 2.586792 GGCCAGCAGTGACTAGGG 59.413 66.667 0.00 0.00 0.00 3.53
58 59 2.185350 CGGCCAGCAGTGACTAGG 59.815 66.667 2.24 0.00 0.00 3.02
59 60 1.153745 GTCGGCCAGCAGTGACTAG 60.154 63.158 2.24 0.00 0.00 2.57
60 61 2.646175 GGTCGGCCAGCAGTGACTA 61.646 63.158 0.00 0.00 34.09 2.59
61 62 4.008933 GGTCGGCCAGCAGTGACT 62.009 66.667 0.00 0.00 34.09 3.41
66 67 4.335647 AACAGGGTCGGCCAGCAG 62.336 66.667 9.07 0.00 36.17 4.24
67 68 4.329545 GAACAGGGTCGGCCAGCA 62.330 66.667 9.07 0.00 36.17 4.41
69 70 3.649277 CTCGAACAGGGTCGGCCAG 62.649 68.421 9.07 1.32 41.43 4.85
70 71 3.691342 CTCGAACAGGGTCGGCCA 61.691 66.667 9.07 0.00 41.43 5.36
71 72 3.379445 TCTCGAACAGGGTCGGCC 61.379 66.667 6.91 0.00 41.43 6.13
72 73 2.126031 GTCTCGAACAGGGTCGGC 60.126 66.667 6.91 0.00 41.43 5.54
73 74 2.178521 CGTCTCGAACAGGGTCGG 59.821 66.667 6.91 0.00 41.43 4.79
74 75 2.504244 GCGTCTCGAACAGGGTCG 60.504 66.667 0.00 0.00 42.48 4.79
75 76 2.126031 GGCGTCTCGAACAGGGTC 60.126 66.667 0.00 0.00 0.00 4.46
76 77 3.692406 GGGCGTCTCGAACAGGGT 61.692 66.667 0.00 0.00 0.00 4.34
77 78 4.452733 GGGGCGTCTCGAACAGGG 62.453 72.222 0.00 0.00 0.00 4.45
78 79 3.382832 AGGGGCGTCTCGAACAGG 61.383 66.667 0.00 0.00 0.00 4.00
79 80 2.125912 CAGGGGCGTCTCGAACAG 60.126 66.667 0.00 0.00 0.00 3.16
80 81 3.691342 CCAGGGGCGTCTCGAACA 61.691 66.667 0.00 0.00 0.00 3.18
81 82 3.379445 TCCAGGGGCGTCTCGAAC 61.379 66.667 0.00 0.00 0.00 3.95
82 83 3.379445 GTCCAGGGGCGTCTCGAA 61.379 66.667 0.00 0.00 0.00 3.71
83 84 4.671590 TGTCCAGGGGCGTCTCGA 62.672 66.667 0.00 0.00 0.00 4.04
84 85 4.436998 GTGTCCAGGGGCGTCTCG 62.437 72.222 0.00 0.00 0.00 4.04
85 86 2.579684 GATGTGTCCAGGGGCGTCTC 62.580 65.000 0.00 0.00 0.00 3.36
86 87 2.607750 ATGTGTCCAGGGGCGTCT 60.608 61.111 0.00 0.00 0.00 4.18
87 88 1.327690 TAGATGTGTCCAGGGGCGTC 61.328 60.000 0.00 0.00 0.00 5.19
88 89 1.305802 TAGATGTGTCCAGGGGCGT 60.306 57.895 0.00 0.00 0.00 5.68
89 90 1.144057 GTAGATGTGTCCAGGGGCG 59.856 63.158 0.00 0.00 0.00 6.13
90 91 1.144057 CGTAGATGTGTCCAGGGGC 59.856 63.158 0.00 0.00 0.00 5.80
91 92 0.976073 ACCGTAGATGTGTCCAGGGG 60.976 60.000 0.00 0.00 0.00 4.79
92 93 1.771565 TACCGTAGATGTGTCCAGGG 58.228 55.000 0.00 0.00 0.00 4.45
93 94 4.765339 TCATATACCGTAGATGTGTCCAGG 59.235 45.833 11.89 0.00 0.00 4.45
94 95 5.959618 TCATATACCGTAGATGTGTCCAG 57.040 43.478 11.89 0.00 0.00 3.86
95 96 5.831525 AGTTCATATACCGTAGATGTGTCCA 59.168 40.000 11.89 0.00 0.00 4.02
96 97 6.328641 AGTTCATATACCGTAGATGTGTCC 57.671 41.667 11.89 1.40 0.00 4.02
97 98 6.073385 TCGAGTTCATATACCGTAGATGTGTC 60.073 42.308 11.89 7.29 0.00 3.67
98 99 5.761726 TCGAGTTCATATACCGTAGATGTGT 59.238 40.000 11.89 0.34 0.00 3.72
99 100 6.237313 TCGAGTTCATATACCGTAGATGTG 57.763 41.667 11.89 0.00 0.00 3.21
100 101 6.653740 TGATCGAGTTCATATACCGTAGATGT 59.346 38.462 11.89 0.00 0.00 3.06
101 102 7.073342 TGATCGAGTTCATATACCGTAGATG 57.927 40.000 6.81 6.81 0.00 2.90
102 103 7.683437 TTGATCGAGTTCATATACCGTAGAT 57.317 36.000 0.00 0.00 0.00 1.98
103 104 7.683437 ATTGATCGAGTTCATATACCGTAGA 57.317 36.000 0.00 0.00 0.00 2.59
104 105 8.237949 AGAATTGATCGAGTTCATATACCGTAG 58.762 37.037 0.00 0.00 0.00 3.51
105 106 8.021396 CAGAATTGATCGAGTTCATATACCGTA 58.979 37.037 0.00 0.00 0.00 4.02
106 107 6.863645 CAGAATTGATCGAGTTCATATACCGT 59.136 38.462 0.00 0.00 0.00 4.83
107 108 6.863645 ACAGAATTGATCGAGTTCATATACCG 59.136 38.462 0.00 0.00 0.00 4.02
108 109 8.491152 CAACAGAATTGATCGAGTTCATATACC 58.509 37.037 0.00 0.00 31.59 2.73
109 110 8.491152 CCAACAGAATTGATCGAGTTCATATAC 58.509 37.037 0.00 0.00 31.59 1.47
110 111 8.421002 TCCAACAGAATTGATCGAGTTCATATA 58.579 33.333 0.00 0.00 31.59 0.86
111 112 7.275183 TCCAACAGAATTGATCGAGTTCATAT 58.725 34.615 0.00 0.00 31.59 1.78
112 113 6.639563 TCCAACAGAATTGATCGAGTTCATA 58.360 36.000 0.00 0.00 31.59 2.15
113 114 5.491070 TCCAACAGAATTGATCGAGTTCAT 58.509 37.500 0.00 0.00 31.59 2.57
114 115 4.893608 TCCAACAGAATTGATCGAGTTCA 58.106 39.130 0.00 0.00 31.59 3.18
115 116 5.171476 TCTCCAACAGAATTGATCGAGTTC 58.829 41.667 0.00 0.00 31.59 3.01
116 117 5.152623 TCTCCAACAGAATTGATCGAGTT 57.847 39.130 0.00 0.00 33.36 3.01
117 118 4.808414 TCTCCAACAGAATTGATCGAGT 57.192 40.909 0.00 0.00 0.00 4.18
118 119 4.025061 GCATCTCCAACAGAATTGATCGAG 60.025 45.833 0.00 0.00 33.62 4.04
119 120 3.873361 GCATCTCCAACAGAATTGATCGA 59.127 43.478 0.00 0.00 33.62 3.59
120 121 3.302935 CGCATCTCCAACAGAATTGATCG 60.303 47.826 0.00 0.00 33.62 3.69
121 122 3.624861 ACGCATCTCCAACAGAATTGATC 59.375 43.478 0.00 0.00 33.62 2.92
122 123 3.614092 ACGCATCTCCAACAGAATTGAT 58.386 40.909 0.00 0.00 33.62 2.57
123 124 3.057969 ACGCATCTCCAACAGAATTGA 57.942 42.857 0.00 0.00 33.62 2.57
124 125 3.058016 ACAACGCATCTCCAACAGAATTG 60.058 43.478 0.00 0.00 33.62 2.32
125 126 3.149196 ACAACGCATCTCCAACAGAATT 58.851 40.909 0.00 0.00 33.62 2.17
126 127 2.783135 ACAACGCATCTCCAACAGAAT 58.217 42.857 0.00 0.00 33.62 2.40
127 128 2.254546 ACAACGCATCTCCAACAGAA 57.745 45.000 0.00 0.00 33.62 3.02
128 129 2.036604 TGTACAACGCATCTCCAACAGA 59.963 45.455 0.00 0.00 34.78 3.41
129 130 2.157668 GTGTACAACGCATCTCCAACAG 59.842 50.000 0.00 0.00 0.00 3.16
130 131 2.139917 GTGTACAACGCATCTCCAACA 58.860 47.619 0.00 0.00 0.00 3.33
131 132 2.139917 TGTGTACAACGCATCTCCAAC 58.860 47.619 0.00 0.00 33.08 3.77
132 133 2.535012 TGTGTACAACGCATCTCCAA 57.465 45.000 0.00 0.00 33.08 3.53
133 134 2.036604 TCTTGTGTACAACGCATCTCCA 59.963 45.455 0.00 0.00 38.53 3.86
134 135 2.683968 TCTTGTGTACAACGCATCTCC 58.316 47.619 0.00 0.00 38.53 3.71
135 136 3.423645 GCTTCTTGTGTACAACGCATCTC 60.424 47.826 0.00 0.00 38.53 2.75
136 137 2.480419 GCTTCTTGTGTACAACGCATCT 59.520 45.455 0.00 0.00 38.53 2.90
137 138 2.223144 TGCTTCTTGTGTACAACGCATC 59.777 45.455 0.00 0.00 38.53 3.91
138 139 2.217750 TGCTTCTTGTGTACAACGCAT 58.782 42.857 0.00 0.00 38.53 4.73
139 140 1.597195 CTGCTTCTTGTGTACAACGCA 59.403 47.619 0.00 0.00 36.74 5.24
140 141 1.864711 TCTGCTTCTTGTGTACAACGC 59.135 47.619 0.00 0.00 0.00 4.84
141 142 2.863740 TGTCTGCTTCTTGTGTACAACG 59.136 45.455 0.00 0.00 0.00 4.10
142 143 4.119862 TCTGTCTGCTTCTTGTGTACAAC 58.880 43.478 0.00 0.00 0.00 3.32
143 144 4.099419 TCTCTGTCTGCTTCTTGTGTACAA 59.901 41.667 0.00 0.00 0.00 2.41
144 145 3.636764 TCTCTGTCTGCTTCTTGTGTACA 59.363 43.478 0.00 0.00 0.00 2.90
145 146 4.022762 TCTCTCTGTCTGCTTCTTGTGTAC 60.023 45.833 0.00 0.00 0.00 2.90
146 147 4.022762 GTCTCTCTGTCTGCTTCTTGTGTA 60.023 45.833 0.00 0.00 0.00 2.90
147 148 2.961741 TCTCTCTGTCTGCTTCTTGTGT 59.038 45.455 0.00 0.00 0.00 3.72
148 149 3.243670 TGTCTCTCTGTCTGCTTCTTGTG 60.244 47.826 0.00 0.00 0.00 3.33
149 150 2.961741 TGTCTCTCTGTCTGCTTCTTGT 59.038 45.455 0.00 0.00 0.00 3.16
150 151 3.577667 CTGTCTCTCTGTCTGCTTCTTG 58.422 50.000 0.00 0.00 0.00 3.02
151 152 2.562298 CCTGTCTCTCTGTCTGCTTCTT 59.438 50.000 0.00 0.00 0.00 2.52
152 153 2.170166 CCTGTCTCTCTGTCTGCTTCT 58.830 52.381 0.00 0.00 0.00 2.85
153 154 1.892474 ACCTGTCTCTCTGTCTGCTTC 59.108 52.381 0.00 0.00 0.00 3.86
154 155 1.617850 CACCTGTCTCTCTGTCTGCTT 59.382 52.381 0.00 0.00 0.00 3.91
155 156 1.255882 CACCTGTCTCTCTGTCTGCT 58.744 55.000 0.00 0.00 0.00 4.24
156 157 0.246086 CCACCTGTCTCTCTGTCTGC 59.754 60.000 0.00 0.00 0.00 4.26
157 158 1.916506 TCCACCTGTCTCTCTGTCTG 58.083 55.000 0.00 0.00 0.00 3.51
158 159 2.830923 CAATCCACCTGTCTCTCTGTCT 59.169 50.000 0.00 0.00 0.00 3.41
159 160 2.828520 TCAATCCACCTGTCTCTCTGTC 59.171 50.000 0.00 0.00 0.00 3.51
160 161 2.894731 TCAATCCACCTGTCTCTCTGT 58.105 47.619 0.00 0.00 0.00 3.41
161 162 4.190001 CAATCAATCCACCTGTCTCTCTG 58.810 47.826 0.00 0.00 0.00 3.35
162 163 3.843027 ACAATCAATCCACCTGTCTCTCT 59.157 43.478 0.00 0.00 0.00 3.10
163 164 4.213564 ACAATCAATCCACCTGTCTCTC 57.786 45.455 0.00 0.00 0.00 3.20
164 165 4.647564 AACAATCAATCCACCTGTCTCT 57.352 40.909 0.00 0.00 0.00 3.10
165 166 4.330074 CGTAACAATCAATCCACCTGTCTC 59.670 45.833 0.00 0.00 0.00 3.36
166 167 4.253685 CGTAACAATCAATCCACCTGTCT 58.746 43.478 0.00 0.00 0.00 3.41
167 168 4.000988 ACGTAACAATCAATCCACCTGTC 58.999 43.478 0.00 0.00 0.00 3.51
168 169 4.000988 GACGTAACAATCAATCCACCTGT 58.999 43.478 0.00 0.00 0.00 4.00
169 170 4.000325 TGACGTAACAATCAATCCACCTG 59.000 43.478 0.00 0.00 0.00 4.00
170 171 4.280436 TGACGTAACAATCAATCCACCT 57.720 40.909 0.00 0.00 0.00 4.00
171 172 4.454504 AGTTGACGTAACAATCAATCCACC 59.545 41.667 0.00 0.00 41.88 4.61
172 173 5.607119 AGTTGACGTAACAATCAATCCAC 57.393 39.130 0.00 0.00 41.88 4.02
173 174 6.460781 AGTAGTTGACGTAACAATCAATCCA 58.539 36.000 0.00 0.00 41.88 3.41
174 175 6.963049 AGTAGTTGACGTAACAATCAATCC 57.037 37.500 0.00 0.00 41.88 3.01
175 176 8.684973 ACTAGTAGTTGACGTAACAATCAATC 57.315 34.615 0.00 0.00 41.88 2.67
176 177 9.565213 GTACTAGTAGTTGACGTAACAATCAAT 57.435 33.333 8.40 0.00 41.88 2.57
177 178 8.567104 TGTACTAGTAGTTGACGTAACAATCAA 58.433 33.333 8.40 0.00 41.88 2.57
178 179 8.098220 TGTACTAGTAGTTGACGTAACAATCA 57.902 34.615 8.40 0.00 41.88 2.57
179 180 9.007252 CATGTACTAGTAGTTGACGTAACAATC 57.993 37.037 8.40 0.00 41.88 2.67
180 181 7.487189 GCATGTACTAGTAGTTGACGTAACAAT 59.513 37.037 8.40 0.00 41.88 2.71
181 182 6.803320 GCATGTACTAGTAGTTGACGTAACAA 59.197 38.462 8.40 0.00 41.88 2.83
182 183 6.072563 TGCATGTACTAGTAGTTGACGTAACA 60.073 38.462 8.40 5.25 41.88 2.41
183 184 6.250104 GTGCATGTACTAGTAGTTGACGTAAC 59.750 42.308 8.40 0.00 39.65 2.50
184 185 6.317088 GTGCATGTACTAGTAGTTGACGTAA 58.683 40.000 8.40 0.00 0.00 3.18
185 186 5.446340 CGTGCATGTACTAGTAGTTGACGTA 60.446 44.000 8.40 0.00 0.00 3.57
186 187 4.670992 CGTGCATGTACTAGTAGTTGACGT 60.671 45.833 8.40 0.00 0.00 4.34
187 188 3.784468 CGTGCATGTACTAGTAGTTGACG 59.216 47.826 8.40 11.07 0.00 4.35
188 189 4.730657 ACGTGCATGTACTAGTAGTTGAC 58.269 43.478 10.57 2.10 0.00 3.18
189 190 5.876460 TCTACGTGCATGTACTAGTAGTTGA 59.124 40.000 14.85 11.49 34.76 3.18
190 191 6.115450 TCTACGTGCATGTACTAGTAGTTG 57.885 41.667 14.85 5.32 34.76 3.16
191 192 6.748333 TTCTACGTGCATGTACTAGTAGTT 57.252 37.500 14.85 0.00 34.76 2.24
192 193 6.748333 TTTCTACGTGCATGTACTAGTAGT 57.252 37.500 14.85 8.14 34.76 2.73
193 194 7.008992 GGTTTTTCTACGTGCATGTACTAGTAG 59.991 40.741 14.85 17.13 34.54 2.57
194 195 6.808212 GGTTTTTCTACGTGCATGTACTAGTA 59.192 38.462 14.85 0.00 0.00 1.82
195 196 5.636543 GGTTTTTCTACGTGCATGTACTAGT 59.363 40.000 14.85 0.00 0.00 2.57
196 197 5.636121 TGGTTTTTCTACGTGCATGTACTAG 59.364 40.000 14.85 7.78 0.00 2.57
197 198 5.539979 TGGTTTTTCTACGTGCATGTACTA 58.460 37.500 14.85 2.11 0.00 1.82
198 199 4.382291 TGGTTTTTCTACGTGCATGTACT 58.618 39.130 14.85 2.19 0.00 2.73
199 200 4.708601 CTGGTTTTTCTACGTGCATGTAC 58.291 43.478 14.85 6.75 0.00 2.90
200 201 3.187637 GCTGGTTTTTCTACGTGCATGTA 59.812 43.478 17.61 17.61 0.00 2.29
201 202 2.031157 GCTGGTTTTTCTACGTGCATGT 60.031 45.455 17.19 17.19 0.00 3.21
202 203 2.584791 GCTGGTTTTTCTACGTGCATG 58.415 47.619 3.82 3.82 0.00 4.06
203 204 1.196808 CGCTGGTTTTTCTACGTGCAT 59.803 47.619 0.00 0.00 0.00 3.96
204 205 0.584396 CGCTGGTTTTTCTACGTGCA 59.416 50.000 0.00 0.00 0.00 4.57
205 206 0.584876 ACGCTGGTTTTTCTACGTGC 59.415 50.000 0.00 0.00 31.71 5.34
206 207 2.294479 CACGCTGGTTTTTCTACGTG 57.706 50.000 0.00 0.00 43.83 4.49
207 208 1.862827 GACACGCTGGTTTTTCTACGT 59.137 47.619 0.00 0.00 0.00 3.57
208 209 1.136721 CGACACGCTGGTTTTTCTACG 60.137 52.381 0.00 0.00 0.00 3.51
209 210 1.862827 ACGACACGCTGGTTTTTCTAC 59.137 47.619 0.00 0.00 0.00 2.59
210 211 2.228138 ACGACACGCTGGTTTTTCTA 57.772 45.000 0.00 0.00 0.00 2.10
211 212 1.329599 GAACGACACGCTGGTTTTTCT 59.670 47.619 0.00 0.00 0.00 2.52
212 213 1.738432 GAACGACACGCTGGTTTTTC 58.262 50.000 0.00 0.00 0.00 2.29
213 214 0.027063 CGAACGACACGCTGGTTTTT 59.973 50.000 0.00 0.00 0.00 1.94
214 215 1.085501 ACGAACGACACGCTGGTTTT 61.086 50.000 0.14 0.00 0.00 2.43
215 216 1.519898 ACGAACGACACGCTGGTTT 60.520 52.632 0.14 0.00 0.00 3.27
216 217 2.105528 ACGAACGACACGCTGGTT 59.894 55.556 0.14 0.00 0.00 3.67
217 218 2.657296 CACGAACGACACGCTGGT 60.657 61.111 0.14 0.00 0.00 4.00
218 219 2.645510 GACACGAACGACACGCTGG 61.646 63.158 0.14 0.00 0.00 4.85
219 220 1.206745 AAGACACGAACGACACGCTG 61.207 55.000 0.14 0.00 0.00 5.18
220 221 1.065273 AAGACACGAACGACACGCT 59.935 52.632 0.14 0.00 0.00 5.07
221 222 1.198397 CAAGACACGAACGACACGC 59.802 57.895 0.14 0.00 0.00 5.34
222 223 0.868602 ACCAAGACACGAACGACACG 60.869 55.000 0.14 0.00 0.00 4.49
223 224 0.850856 GACCAAGACACGAACGACAC 59.149 55.000 0.14 0.00 0.00 3.67
224 225 0.456628 TGACCAAGACACGAACGACA 59.543 50.000 0.14 0.00 0.00 4.35
225 226 0.850856 GTGACCAAGACACGAACGAC 59.149 55.000 0.14 0.00 0.00 4.34
226 227 0.249155 GGTGACCAAGACACGAACGA 60.249 55.000 0.00 0.00 38.90 3.85
227 228 1.545614 CGGTGACCAAGACACGAACG 61.546 60.000 1.11 0.00 38.90 3.95
228 229 1.828331 GCGGTGACCAAGACACGAAC 61.828 60.000 1.11 0.00 38.90 3.95
229 230 1.593209 GCGGTGACCAAGACACGAA 60.593 57.895 1.11 0.00 38.90 3.85
230 231 2.028484 GCGGTGACCAAGACACGA 59.972 61.111 1.11 0.00 38.90 4.35
231 232 3.041940 GGCGGTGACCAAGACACG 61.042 66.667 1.11 0.00 38.90 4.49
232 233 3.041940 CGGCGGTGACCAAGACAC 61.042 66.667 1.11 0.00 37.51 3.67
233 234 3.220999 CTCGGCGGTGACCAAGACA 62.221 63.158 7.21 0.00 0.00 3.41
234 235 2.432628 CTCGGCGGTGACCAAGAC 60.433 66.667 7.21 0.00 0.00 3.01
235 236 4.373116 GCTCGGCGGTGACCAAGA 62.373 66.667 7.21 0.00 0.00 3.02
236 237 4.379243 AGCTCGGCGGTGACCAAG 62.379 66.667 7.21 0.00 0.00 3.61
237 238 4.373116 GAGCTCGGCGGTGACCAA 62.373 66.667 7.21 0.00 0.00 3.67
249 250 4.593864 GACCGGGATGGCGAGCTC 62.594 72.222 6.32 2.73 43.94 4.09
252 253 1.464376 ATAGTGACCGGGATGGCGAG 61.464 60.000 6.32 0.00 43.94 5.03
253 254 0.178984 TATAGTGACCGGGATGGCGA 60.179 55.000 6.32 0.00 43.94 5.54
254 255 0.038526 GTATAGTGACCGGGATGGCG 60.039 60.000 6.32 0.00 43.94 5.69
255 256 1.339097 AGTATAGTGACCGGGATGGC 58.661 55.000 6.32 0.00 43.94 4.40
256 257 4.159879 GGAATAGTATAGTGACCGGGATGG 59.840 50.000 6.32 0.00 46.41 3.51
257 258 5.017490 AGGAATAGTATAGTGACCGGGATG 58.983 45.833 6.32 0.00 0.00 3.51
258 259 5.015391 AGAGGAATAGTATAGTGACCGGGAT 59.985 44.000 6.32 0.00 0.00 3.85
259 260 4.353191 AGAGGAATAGTATAGTGACCGGGA 59.647 45.833 6.32 0.00 0.00 5.14
260 261 4.664392 AGAGGAATAGTATAGTGACCGGG 58.336 47.826 6.32 0.00 0.00 5.73
261 262 5.562635 AGAGAGGAATAGTATAGTGACCGG 58.437 45.833 0.00 0.00 0.00 5.28
262 263 7.879160 AGTTAGAGAGGAATAGTATAGTGACCG 59.121 40.741 0.00 0.00 0.00 4.79
263 264 9.577222 AAGTTAGAGAGGAATAGTATAGTGACC 57.423 37.037 0.00 0.00 0.00 4.02
270 271 8.852135 GCTGTACAAGTTAGAGAGGAATAGTAT 58.148 37.037 0.00 0.00 0.00 2.12
271 272 8.053963 AGCTGTACAAGTTAGAGAGGAATAGTA 58.946 37.037 0.00 0.00 0.00 1.82
272 273 6.893005 AGCTGTACAAGTTAGAGAGGAATAGT 59.107 38.462 0.00 0.00 0.00 2.12
273 274 7.341445 AGCTGTACAAGTTAGAGAGGAATAG 57.659 40.000 0.00 0.00 0.00 1.73
274 275 6.038382 CGAGCTGTACAAGTTAGAGAGGAATA 59.962 42.308 0.00 0.00 0.00 1.75
275 276 5.163602 CGAGCTGTACAAGTTAGAGAGGAAT 60.164 44.000 0.00 0.00 0.00 3.01
276 277 4.156190 CGAGCTGTACAAGTTAGAGAGGAA 59.844 45.833 0.00 0.00 0.00 3.36
277 278 3.690139 CGAGCTGTACAAGTTAGAGAGGA 59.310 47.826 0.00 0.00 0.00 3.71
278 279 3.732471 GCGAGCTGTACAAGTTAGAGAGG 60.732 52.174 0.00 0.00 0.00 3.69
279 280 3.127895 AGCGAGCTGTACAAGTTAGAGAG 59.872 47.826 0.00 0.00 0.00 3.20
280 281 3.082548 AGCGAGCTGTACAAGTTAGAGA 58.917 45.455 0.00 0.00 0.00 3.10
281 282 3.175152 CAGCGAGCTGTACAAGTTAGAG 58.825 50.000 16.29 0.00 39.10 2.43
282 283 3.217599 CAGCGAGCTGTACAAGTTAGA 57.782 47.619 16.29 0.00 39.10 2.10
301 302 0.923358 ACTGGAAAACCACTGGGACA 59.077 50.000 0.00 0.00 38.05 4.02
302 303 1.143073 AGACTGGAAAACCACTGGGAC 59.857 52.381 0.00 0.00 38.05 4.46
303 304 1.518367 AGACTGGAAAACCACTGGGA 58.482 50.000 0.00 0.00 38.05 4.37
304 305 2.230660 GAAGACTGGAAAACCACTGGG 58.769 52.381 0.00 0.00 41.29 4.45
305 306 2.880890 CTGAAGACTGGAAAACCACTGG 59.119 50.000 0.00 0.00 0.00 4.00
306 307 3.808728 TCTGAAGACTGGAAAACCACTG 58.191 45.455 0.00 0.00 0.00 3.66
307 308 4.713792 ATCTGAAGACTGGAAAACCACT 57.286 40.909 0.00 0.00 0.00 4.00
308 309 4.580580 ACAATCTGAAGACTGGAAAACCAC 59.419 41.667 0.00 0.00 0.00 4.16
309 310 4.580167 CACAATCTGAAGACTGGAAAACCA 59.420 41.667 0.00 0.00 0.00 3.67
310 311 4.821805 TCACAATCTGAAGACTGGAAAACC 59.178 41.667 0.00 0.00 0.00 3.27
311 312 6.205464 TGATCACAATCTGAAGACTGGAAAAC 59.795 38.462 0.00 0.00 32.75 2.43
312 313 6.205464 GTGATCACAATCTGAAGACTGGAAAA 59.795 38.462 21.07 0.00 32.75 2.29
313 314 5.702670 GTGATCACAATCTGAAGACTGGAAA 59.297 40.000 21.07 0.00 32.75 3.13
314 315 5.012458 AGTGATCACAATCTGAAGACTGGAA 59.988 40.000 27.02 0.00 32.75 3.53
315 316 4.529769 AGTGATCACAATCTGAAGACTGGA 59.470 41.667 27.02 0.00 32.75 3.86
316 317 4.630505 CAGTGATCACAATCTGAAGACTGG 59.369 45.833 27.02 0.00 37.95 4.00
317 318 4.630505 CCAGTGATCACAATCTGAAGACTG 59.369 45.833 27.02 11.70 39.65 3.51
318 319 4.529769 TCCAGTGATCACAATCTGAAGACT 59.470 41.667 27.02 0.00 32.75 3.24
319 320 4.825422 TCCAGTGATCACAATCTGAAGAC 58.175 43.478 27.02 0.00 32.75 3.01
320 321 4.529769 ACTCCAGTGATCACAATCTGAAGA 59.470 41.667 27.02 9.42 32.75 2.87
321 322 4.829968 ACTCCAGTGATCACAATCTGAAG 58.170 43.478 27.02 12.46 32.75 3.02
322 323 4.284234 TGACTCCAGTGATCACAATCTGAA 59.716 41.667 27.02 5.70 32.75 3.02
323 324 3.834231 TGACTCCAGTGATCACAATCTGA 59.166 43.478 27.02 13.84 32.75 3.27
324 325 4.198028 TGACTCCAGTGATCACAATCTG 57.802 45.455 27.02 15.96 32.75 2.90
325 326 4.468868 TCATGACTCCAGTGATCACAATCT 59.531 41.667 27.02 3.94 32.75 2.40
326 327 4.763073 TCATGACTCCAGTGATCACAATC 58.237 43.478 27.02 15.84 0.00 2.67
327 328 4.831674 TCATGACTCCAGTGATCACAAT 57.168 40.909 27.02 5.13 0.00 2.71
328 329 4.622260 TTCATGACTCCAGTGATCACAA 57.378 40.909 27.02 11.41 0.00 3.33
329 330 4.831674 ATTCATGACTCCAGTGATCACA 57.168 40.909 27.02 6.41 0.00 3.58
330 331 6.404074 GGAAAATTCATGACTCCAGTGATCAC 60.404 42.308 18.47 18.47 0.00 3.06
331 332 5.649395 GGAAAATTCATGACTCCAGTGATCA 59.351 40.000 0.00 0.00 0.00 2.92
332 333 5.649395 TGGAAAATTCATGACTCCAGTGATC 59.351 40.000 9.79 0.00 32.42 2.92
333 334 5.573219 TGGAAAATTCATGACTCCAGTGAT 58.427 37.500 9.79 0.00 32.42 3.06
334 335 4.984295 TGGAAAATTCATGACTCCAGTGA 58.016 39.130 9.79 0.00 32.42 3.41
335 336 5.651139 AGATGGAAAATTCATGACTCCAGTG 59.349 40.000 16.13 0.00 39.47 3.66
336 337 5.824421 AGATGGAAAATTCATGACTCCAGT 58.176 37.500 16.13 7.29 39.47 4.00
337 338 6.770746 AAGATGGAAAATTCATGACTCCAG 57.229 37.500 16.13 0.00 39.47 3.86
338 339 8.827832 ATTAAGATGGAAAATTCATGACTCCA 57.172 30.769 14.27 14.27 40.36 3.86
339 340 9.129532 AGATTAAGATGGAAAATTCATGACTCC 57.870 33.333 0.00 0.00 0.00 3.85
342 343 9.525409 CCAAGATTAAGATGGAAAATTCATGAC 57.475 33.333 0.00 0.00 36.27 3.06
343 344 8.698210 CCCAAGATTAAGATGGAAAATTCATGA 58.302 33.333 0.00 0.00 36.27 3.07
344 345 8.480501 ACCCAAGATTAAGATGGAAAATTCATG 58.519 33.333 5.72 0.00 36.27 3.07
345 346 8.613922 ACCCAAGATTAAGATGGAAAATTCAT 57.386 30.769 5.72 0.00 36.27 2.57
346 347 7.148086 CGACCCAAGATTAAGATGGAAAATTCA 60.148 37.037 5.72 0.00 36.27 2.57
347 348 7.196331 CGACCCAAGATTAAGATGGAAAATTC 58.804 38.462 5.72 0.00 36.27 2.17
348 349 6.096846 CCGACCCAAGATTAAGATGGAAAATT 59.903 38.462 5.72 0.00 36.27 1.82
349 350 5.594317 CCGACCCAAGATTAAGATGGAAAAT 59.406 40.000 5.72 0.00 36.27 1.82
350 351 4.947388 CCGACCCAAGATTAAGATGGAAAA 59.053 41.667 5.72 0.00 36.27 2.29
351 352 4.523083 CCGACCCAAGATTAAGATGGAAA 58.477 43.478 5.72 0.00 36.27 3.13
352 353 3.684413 GCCGACCCAAGATTAAGATGGAA 60.684 47.826 5.72 0.00 36.27 3.53
353 354 2.158813 GCCGACCCAAGATTAAGATGGA 60.159 50.000 5.72 0.00 36.27 3.41
354 355 2.222027 GCCGACCCAAGATTAAGATGG 58.778 52.381 0.00 0.00 0.00 3.51
355 356 2.158755 AGGCCGACCCAAGATTAAGATG 60.159 50.000 0.00 0.00 36.11 2.90
356 357 2.104963 GAGGCCGACCCAAGATTAAGAT 59.895 50.000 0.00 0.00 36.11 2.40
357 358 1.485066 GAGGCCGACCCAAGATTAAGA 59.515 52.381 0.00 0.00 36.11 2.10
358 359 1.806623 CGAGGCCGACCCAAGATTAAG 60.807 57.143 0.00 0.00 38.22 1.85
359 360 0.177141 CGAGGCCGACCCAAGATTAA 59.823 55.000 0.00 0.00 38.22 1.40
360 361 0.974010 ACGAGGCCGACCCAAGATTA 60.974 55.000 0.00 0.00 39.50 1.75
361 362 0.974010 TACGAGGCCGACCCAAGATT 60.974 55.000 0.00 0.00 39.50 2.40
362 363 0.759436 ATACGAGGCCGACCCAAGAT 60.759 55.000 0.00 0.00 39.50 2.40
363 364 0.106569 TATACGAGGCCGACCCAAGA 60.107 55.000 0.00 0.00 39.50 3.02
364 365 0.031721 GTATACGAGGCCGACCCAAG 59.968 60.000 0.00 0.00 39.50 3.61
365 366 1.394266 GGTATACGAGGCCGACCCAA 61.394 60.000 0.00 0.00 39.50 4.12
366 367 1.829533 GGTATACGAGGCCGACCCA 60.830 63.158 0.00 0.00 39.50 4.51
367 368 2.568425 GGGTATACGAGGCCGACCC 61.568 68.421 11.56 11.56 41.24 4.46
368 369 1.394266 TTGGGTATACGAGGCCGACC 61.394 60.000 0.00 0.00 39.50 4.79
369 370 0.677842 ATTGGGTATACGAGGCCGAC 59.322 55.000 0.00 0.00 39.50 4.79
370 371 0.677288 CATTGGGTATACGAGGCCGA 59.323 55.000 0.00 0.00 39.50 5.54
371 372 0.320421 CCATTGGGTATACGAGGCCG 60.320 60.000 0.00 0.00 42.50 6.13
372 373 0.036306 CCCATTGGGTATACGAGGCC 59.964 60.000 14.10 0.00 38.25 5.19
373 374 3.625745 CCCATTGGGTATACGAGGC 57.374 57.895 14.10 0.00 38.25 4.70
384 385 1.379044 GGCCTCACTGACCCATTGG 60.379 63.158 0.00 0.00 37.80 3.16
385 386 0.033796 ATGGCCTCACTGACCCATTG 60.034 55.000 3.32 0.00 34.53 2.82
386 387 1.595311 TATGGCCTCACTGACCCATT 58.405 50.000 3.32 0.00 38.85 3.16
387 388 1.595311 TTATGGCCTCACTGACCCAT 58.405 50.000 3.32 10.09 40.87 4.00
388 389 1.367346 TTTATGGCCTCACTGACCCA 58.633 50.000 3.32 0.00 0.00 4.51
389 390 2.736670 ATTTATGGCCTCACTGACCC 57.263 50.000 3.32 0.00 0.00 4.46
390 391 5.047377 TCAAAAATTTATGGCCTCACTGACC 60.047 40.000 3.32 0.00 0.00 4.02
391 392 6.024552 TCAAAAATTTATGGCCTCACTGAC 57.975 37.500 3.32 0.00 0.00 3.51
392 393 6.436847 TCATCAAAAATTTATGGCCTCACTGA 59.563 34.615 3.32 0.00 0.00 3.41
393 394 6.632909 TCATCAAAAATTTATGGCCTCACTG 58.367 36.000 3.32 0.00 0.00 3.66
394 395 6.855763 TCATCAAAAATTTATGGCCTCACT 57.144 33.333 3.32 0.00 0.00 3.41
395 396 7.903995 TTTCATCAAAAATTTATGGCCTCAC 57.096 32.000 3.32 0.00 0.00 3.51
396 397 7.553402 CCATTTCATCAAAAATTTATGGCCTCA 59.447 33.333 3.32 0.00 0.00 3.86
397 398 7.012610 CCCATTTCATCAAAAATTTATGGCCTC 59.987 37.037 3.32 0.00 0.00 4.70
398 399 6.829811 CCCATTTCATCAAAAATTTATGGCCT 59.170 34.615 3.32 0.00 0.00 5.19
399 400 6.602803 ACCCATTTCATCAAAAATTTATGGCC 59.397 34.615 0.00 0.00 0.00 5.36
400 401 7.628769 ACCCATTTCATCAAAAATTTATGGC 57.371 32.000 6.77 0.00 0.00 4.40
401 402 9.228949 TCAACCCATTTCATCAAAAATTTATGG 57.771 29.630 5.66 5.66 0.00 2.74
403 404 9.230122 GGTCAACCCATTTCATCAAAAATTTAT 57.770 29.630 0.00 0.00 0.00 1.40
404 405 8.614469 GGTCAACCCATTTCATCAAAAATTTA 57.386 30.769 0.00 0.00 0.00 1.40
405 406 7.509141 GGTCAACCCATTTCATCAAAAATTT 57.491 32.000 0.00 0.00 0.00 1.82
422 423 1.678970 GTGAGGCCATGGGTCAACC 60.679 63.158 15.13 5.47 40.81 3.77
423 424 0.323725 ATGTGAGGCCATGGGTCAAC 60.324 55.000 15.13 0.00 0.00 3.18
424 425 1.294041 TATGTGAGGCCATGGGTCAA 58.706 50.000 15.13 0.00 0.00 3.18
425 426 1.521764 ATATGTGAGGCCATGGGTCA 58.478 50.000 15.13 0.00 0.00 4.02
426 427 2.158623 TCAATATGTGAGGCCATGGGTC 60.159 50.000 15.13 0.00 0.00 4.46
427 428 1.852309 TCAATATGTGAGGCCATGGGT 59.148 47.619 15.13 0.00 0.00 4.51
428 429 2.233271 GTCAATATGTGAGGCCATGGG 58.767 52.381 15.13 0.00 36.74 4.00
429 430 2.158564 AGGTCAATATGTGAGGCCATGG 60.159 50.000 7.63 7.63 36.74 3.66
430 431 3.219176 AGGTCAATATGTGAGGCCATG 57.781 47.619 5.01 0.00 36.74 3.66
431 432 3.559069 CAAGGTCAATATGTGAGGCCAT 58.441 45.455 5.01 0.00 36.74 4.40
432 433 2.357050 CCAAGGTCAATATGTGAGGCCA 60.357 50.000 5.01 0.00 36.74 5.36
433 434 2.301346 CCAAGGTCAATATGTGAGGCC 58.699 52.381 0.00 0.00 36.74 5.19
434 435 2.301346 CCCAAGGTCAATATGTGAGGC 58.699 52.381 0.00 0.00 36.74 4.70
435 436 2.936202 CCCCAAGGTCAATATGTGAGG 58.064 52.381 0.00 0.00 36.74 3.86
436 437 2.301346 GCCCCAAGGTCAATATGTGAG 58.699 52.381 0.00 0.00 36.74 3.51
437 438 1.064017 GGCCCCAAGGTCAATATGTGA 60.064 52.381 0.00 0.00 37.86 3.58
438 439 1.402787 GGCCCCAAGGTCAATATGTG 58.597 55.000 0.00 0.00 37.86 3.21
439 440 3.924576 GGCCCCAAGGTCAATATGT 57.075 52.632 0.00 0.00 37.86 2.29
464 465 4.506255 GGAATGGCCCGGACCTGG 62.506 72.222 8.77 0.00 0.00 4.45
473 474 5.082425 AGATAATTCAAGATGGGAATGGCC 58.918 41.667 0.00 0.00 35.28 5.36
474 475 6.453092 CAAGATAATTCAAGATGGGAATGGC 58.547 40.000 0.00 0.00 35.28 4.40
475 476 6.453092 GCAAGATAATTCAAGATGGGAATGG 58.547 40.000 0.00 0.00 35.28 3.16
476 477 6.453092 GGCAAGATAATTCAAGATGGGAATG 58.547 40.000 0.00 0.00 35.28 2.67
477 478 5.541484 GGGCAAGATAATTCAAGATGGGAAT 59.459 40.000 0.00 0.00 36.57 3.01
478 479 4.895297 GGGCAAGATAATTCAAGATGGGAA 59.105 41.667 0.00 0.00 0.00 3.97
479 480 4.079269 TGGGCAAGATAATTCAAGATGGGA 60.079 41.667 0.00 0.00 0.00 4.37
480 481 4.217510 TGGGCAAGATAATTCAAGATGGG 58.782 43.478 0.00 0.00 0.00 4.00
481 482 5.135383 TCTGGGCAAGATAATTCAAGATGG 58.865 41.667 0.00 0.00 0.00 3.51
482 483 6.678878 CATCTGGGCAAGATAATTCAAGATG 58.321 40.000 3.52 0.00 44.24 2.90
483 484 5.243283 GCATCTGGGCAAGATAATTCAAGAT 59.757 40.000 3.52 0.00 44.24 2.40
484 485 4.581824 GCATCTGGGCAAGATAATTCAAGA 59.418 41.667 3.52 0.00 44.24 3.02
485 486 4.583489 AGCATCTGGGCAAGATAATTCAAG 59.417 41.667 3.52 0.00 44.24 3.02
486 487 4.539726 AGCATCTGGGCAAGATAATTCAA 58.460 39.130 3.52 0.00 44.24 2.69
487 488 4.174704 AGCATCTGGGCAAGATAATTCA 57.825 40.909 3.52 0.00 44.24 2.57
490 491 7.008941 AGAATTTAGCATCTGGGCAAGATAAT 58.991 34.615 3.52 0.00 44.24 1.28
493 494 5.659971 AAAGAATTTAGCATCTGGGCAAGAT 59.340 36.000 0.00 0.00 41.05 2.40
513 514 7.879070 AGATGTGTAGTACTCGTTAACAAAGA 58.121 34.615 0.00 0.00 0.00 2.52
514 515 8.516811 AAGATGTGTAGTACTCGTTAACAAAG 57.483 34.615 0.00 5.01 0.00 2.77
517 518 7.428020 ACAAAGATGTGTAGTACTCGTTAACA 58.572 34.615 0.00 0.00 38.69 2.41
518 519 7.864307 ACAAAGATGTGTAGTACTCGTTAAC 57.136 36.000 0.00 0.00 38.69 2.01
521 522 9.485206 AAATAACAAAGATGTGTAGTACTCGTT 57.515 29.630 0.00 0.17 40.46 3.85
522 523 9.136952 GAAATAACAAAGATGTGTAGTACTCGT 57.863 33.333 0.00 0.00 40.46 4.18
523 524 8.311822 CGAAATAACAAAGATGTGTAGTACTCG 58.688 37.037 0.00 0.00 40.46 4.18
524 525 9.350357 TCGAAATAACAAAGATGTGTAGTACTC 57.650 33.333 0.00 0.00 40.46 2.59
525 526 9.355215 CTCGAAATAACAAAGATGTGTAGTACT 57.645 33.333 0.00 0.00 40.46 2.73
526 527 8.592998 CCTCGAAATAACAAAGATGTGTAGTAC 58.407 37.037 0.00 0.00 40.46 2.73
548 549 3.118775 TGGGATAAATGTCAGTCACCTCG 60.119 47.826 0.00 0.00 0.00 4.63
586 587 2.170187 AGAGACTAGGAGCATTGCAAGG 59.830 50.000 11.91 6.76 0.00 3.61
587 588 3.118847 TCAGAGACTAGGAGCATTGCAAG 60.119 47.826 11.91 5.23 0.00 4.01
592 593 4.646945 TCGAATTCAGAGACTAGGAGCATT 59.353 41.667 6.22 0.00 0.00 3.56
605 606 3.067106 GCTGGTTTCTGTCGAATTCAGA 58.933 45.455 6.22 0.36 39.71 3.27
699 700 5.871396 AGGAGCAGAGATATTTTCCGTTA 57.129 39.130 0.00 0.00 0.00 3.18
702 703 6.090483 TCTTAGGAGCAGAGATATTTTCCG 57.910 41.667 0.00 0.00 0.00 4.30
761 808 5.106673 CCATCAACGGTCTTTCTTTAGGAAC 60.107 44.000 0.00 0.00 33.13 3.62
994 1091 1.414061 ATCCTGCCCTCCATTCTCGG 61.414 60.000 0.00 0.00 0.00 4.63
1162 1265 3.744719 CTCCTTCACGTCGGCGGA 61.745 66.667 16.39 5.28 43.45 5.54
1491 1594 1.612950 CGTCCCATCCATCTCTCAGAG 59.387 57.143 0.00 0.00 0.00 3.35
1492 1595 1.215423 TCGTCCCATCCATCTCTCAGA 59.785 52.381 0.00 0.00 0.00 3.27
1493 1596 1.339610 GTCGTCCCATCCATCTCTCAG 59.660 57.143 0.00 0.00 0.00 3.35
1494 1597 1.403814 GTCGTCCCATCCATCTCTCA 58.596 55.000 0.00 0.00 0.00 3.27
1495 1598 0.312416 CGTCGTCCCATCCATCTCTC 59.688 60.000 0.00 0.00 0.00 3.20
1496 1599 1.109920 CCGTCGTCCCATCCATCTCT 61.110 60.000 0.00 0.00 0.00 3.10
1497 1600 1.107538 TCCGTCGTCCCATCCATCTC 61.108 60.000 0.00 0.00 0.00 2.75
1498 1601 1.076265 TCCGTCGTCCCATCCATCT 60.076 57.895 0.00 0.00 0.00 2.90
1514 1621 0.325203 AAGGACCTCTCTCTGGCTCC 60.325 60.000 0.00 0.00 0.00 4.70
1517 1624 0.392327 GCAAAGGACCTCTCTCTGGC 60.392 60.000 0.00 0.00 0.00 4.85
1537 1645 2.390599 GCTTCGATCAGGCGTGCAA 61.391 57.895 0.35 0.00 34.24 4.08
1611 1730 4.238514 ACGAGCAGAGATAGAAAACACAC 58.761 43.478 0.00 0.00 0.00 3.82
1665 1787 0.681175 AAATTGCGCCCTGAAAGCTT 59.319 45.000 4.18 0.00 0.00 3.74
1666 1788 0.244721 GAAATTGCGCCCTGAAAGCT 59.755 50.000 4.18 0.00 0.00 3.74
1719 1841 8.469200 TGGAAGAAAGGCAATTATTTCAGTATG 58.531 33.333 10.73 0.00 37.78 2.39
1720 1842 8.593945 TGGAAGAAAGGCAATTATTTCAGTAT 57.406 30.769 10.73 0.00 37.78 2.12
1721 1843 8.415950 TTGGAAGAAAGGCAATTATTTCAGTA 57.584 30.769 10.73 0.00 37.78 2.74
1722 1844 6.916360 TGGAAGAAAGGCAATTATTTCAGT 57.084 33.333 10.73 1.63 37.78 3.41
1723 1845 8.606040 TTTTGGAAGAAAGGCAATTATTTCAG 57.394 30.769 10.73 0.00 37.78 3.02
1729 1851 9.253832 TGAGATATTTTGGAAGAAAGGCAATTA 57.746 29.630 0.00 0.00 0.00 1.40
1730 1852 8.137745 TGAGATATTTTGGAAGAAAGGCAATT 57.862 30.769 0.00 0.00 0.00 2.32
1731 1853 7.398332 ACTGAGATATTTTGGAAGAAAGGCAAT 59.602 33.333 0.00 0.00 0.00 3.56
1732 1854 6.721208 ACTGAGATATTTTGGAAGAAAGGCAA 59.279 34.615 0.00 0.00 0.00 4.52
1733 1855 6.248433 ACTGAGATATTTTGGAAGAAAGGCA 58.752 36.000 0.00 0.00 0.00 4.75
1734 1856 6.765915 ACTGAGATATTTTGGAAGAAAGGC 57.234 37.500 0.00 0.00 0.00 4.35
1898 2062 1.395954 GGCGAATTAACCGACTTCCAC 59.604 52.381 3.59 0.00 31.20 4.02
1907 2071 2.096248 TCAACCATGGGCGAATTAACC 58.904 47.619 18.09 0.00 0.00 2.85
2185 2721 7.867305 TTACATGTTTGAACAAGAACACCTA 57.133 32.000 2.30 0.00 43.03 3.08
2216 2754 7.766738 TGAAATAATAGTATTGCGTCCTTGACA 59.233 33.333 5.61 0.00 28.59 3.58
2249 2787 6.450545 TGGAGTCGTCATTCATAAGATCATC 58.549 40.000 0.00 0.00 0.00 2.92
2351 2889 6.543465 AGATTGACTTCATTCCATGCGATAAA 59.457 34.615 0.00 0.00 0.00 1.40
2358 2896 6.937436 TCATGAGATTGACTTCATTCCATG 57.063 37.500 16.59 16.59 36.93 3.66
2366 2904 8.770438 AGTAAACTCTTCATGAGATTGACTTC 57.230 34.615 0.00 0.00 45.39 3.01
2394 2934 7.755373 GGTGTTTTCTTGACTTTCTATTATGCC 59.245 37.037 0.00 0.00 0.00 4.40
2441 2981 2.559698 TGAGATCAAGGGCGTGAAAA 57.440 45.000 0.00 0.00 0.00 2.29


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.