Multiple sequence alignment - TraesCS3D01G098700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G098700 chr3D 100.000 2839 0 0 1 2839 50402162 50399324 0.000000e+00 5243.0
1 TraesCS3D01G098700 chr3D 81.579 304 54 1 1373 1676 45388574 45388273 1.690000e-62 250.0
2 TraesCS3D01G098700 chr3D 82.239 259 38 2 997 1247 45356191 45356449 1.710000e-52 217.0
3 TraesCS3D01G098700 chr3D 84.906 212 20 6 2238 2448 45387956 45387756 1.330000e-48 204.0
4 TraesCS3D01G098700 chr3D 90.411 146 13 1 1510 1654 45356645 45356790 1.040000e-44 191.0
5 TraesCS3D01G098700 chr3D 93.043 115 6 2 1 113 610571219 610571105 1.750000e-37 167.0
6 TraesCS3D01G098700 chr3D 93.684 95 6 0 1980 2074 572127428 572127522 2.950000e-30 143.0
7 TraesCS3D01G098700 chr3D 89.815 108 11 0 1162 1269 45388827 45388720 3.810000e-29 139.0
8 TraesCS3D01G098700 chr3D 89.091 55 3 2 1830 1881 91369045 91369099 6.560000e-07 65.8
9 TraesCS3D01G098700 chr3A 90.466 923 60 10 777 1680 63477224 63476311 0.000000e+00 1192.0
10 TraesCS3D01G098700 chr3A 86.241 407 29 11 2225 2619 63476065 63475674 1.570000e-112 416.0
11 TraesCS3D01G098700 chr3A 88.961 308 31 1 984 1288 57148977 57148670 7.420000e-101 377.0
12 TraesCS3D01G098700 chr3A 91.506 259 22 0 989 1247 15342998 15343256 9.670000e-95 357.0
13 TraesCS3D01G098700 chr3A 90.654 214 15 2 1744 1956 63476285 63476076 2.150000e-71 279.0
14 TraesCS3D01G098700 chr3A 95.031 161 6 1 1517 1677 15343454 15343612 4.700000e-63 252.0
15 TraesCS3D01G098700 chr3A 91.463 164 12 1 1513 1676 57148413 57148252 1.020000e-54 224.0
16 TraesCS3D01G098700 chr3A 94.737 95 5 0 2072 2166 692889904 692889810 6.340000e-32 148.0
17 TraesCS3D01G098700 chr3A 89.091 55 3 2 1830 1881 107417179 107417233 6.560000e-07 65.8
18 TraesCS3D01G098700 chr3B 89.407 944 60 24 777 1701 79956362 79955440 0.000000e+00 1153.0
19 TraesCS3D01G098700 chr3B 93.711 159 9 1 1799 1956 79955392 79955234 1.310000e-58 237.0
20 TraesCS3D01G098700 chr3B 91.096 146 12 1 1510 1654 70906424 70906569 2.230000e-46 196.0
21 TraesCS3D01G098700 chr3B 91.270 126 8 3 2716 2839 79954492 79954368 4.860000e-38 169.0
22 TraesCS3D01G098700 chr3B 92.941 85 5 1 2627 2711 79954876 79954793 3.840000e-24 122.0
23 TraesCS3D01G098700 chr3B 89.474 95 10 0 2072 2166 551514134 551514040 1.380000e-23 121.0
24 TraesCS3D01G098700 chr7D 93.151 657 38 6 119 772 572439517 572438865 0.000000e+00 957.0
25 TraesCS3D01G098700 chr7D 92.846 657 40 6 119 772 572414280 572414932 0.000000e+00 946.0
26 TraesCS3D01G098700 chr7D 89.970 668 53 6 108 772 17217686 17218342 0.000000e+00 850.0
27 TraesCS3D01G098700 chr7D 89.450 673 59 11 108 773 63562766 63562099 0.000000e+00 839.0
28 TraesCS3D01G098700 chr7D 94.595 111 5 1 1 111 9862259 9862368 1.350000e-38 171.0
29 TraesCS3D01G098700 chr7D 94.444 108 6 0 1 108 67697487 67697594 1.750000e-37 167.0
30 TraesCS3D01G098700 chr4D 91.194 670 49 9 108 773 13212582 13211919 0.000000e+00 902.0
31 TraesCS3D01G098700 chr4D 82.143 280 43 7 972 1245 10743956 10744234 1.700000e-57 233.0
32 TraesCS3D01G098700 chr4D 95.699 93 3 1 2075 2166 481177537 481177445 6.340000e-32 148.0
33 TraesCS3D01G098700 chr4D 95.652 92 4 0 1983 2074 481177551 481177460 6.340000e-32 148.0
34 TraesCS3D01G098700 chr5D 90.569 668 54 8 108 771 385123138 385122476 0.000000e+00 876.0
35 TraesCS3D01G098700 chr5D 94.495 109 6 0 1 109 481154216 481154324 4.860000e-38 169.0
36 TraesCS3D01G098700 chr5D 94.495 109 6 0 1 109 533395578 533395686 4.860000e-38 169.0
37 TraesCS3D01G098700 chr5D 91.453 117 10 0 1 117 563132827 563132711 8.140000e-36 161.0
38 TraesCS3D01G098700 chr5D 94.681 94 5 0 1981 2074 555095 555002 2.280000e-31 147.0
39 TraesCS3D01G098700 chr5D 93.750 96 5 1 2072 2166 335869019 335868924 2.950000e-30 143.0
40 TraesCS3D01G098700 chr4A 83.103 1012 118 27 973 1971 625785326 625784355 0.000000e+00 872.0
41 TraesCS3D01G098700 chr4A 91.700 253 18 3 991 1242 625634205 625634455 5.820000e-92 348.0
42 TraesCS3D01G098700 chr4A 86.154 260 31 5 990 1245 593204551 593204809 2.790000e-70 276.0
43 TraesCS3D01G098700 chr4A 90.260 154 13 2 1514 1667 625640763 625640914 1.720000e-47 200.0
44 TraesCS3D01G098700 chr4A 80.526 190 32 4 1004 1192 710174829 710174644 1.060000e-29 141.0
45 TraesCS3D01G098700 chr1D 90.419 668 49 13 108 767 379578494 379579154 0.000000e+00 865.0
46 TraesCS3D01G098700 chr1D 94.545 110 6 0 1 110 12781740 12781849 1.350000e-38 171.0
47 TraesCS3D01G098700 chr1D 90.400 125 9 3 1 122 71590998 71591122 8.140000e-36 161.0
48 TraesCS3D01G098700 chr6D 90.105 667 53 12 108 767 78061412 78062072 0.000000e+00 854.0
49 TraesCS3D01G098700 chr6D 89.955 667 56 11 108 772 407179082 407179739 0.000000e+00 850.0
50 TraesCS3D01G098700 chr6D 93.750 96 6 0 1979 2074 435974459 435974364 8.200000e-31 145.0
51 TraesCS3D01G098700 chr7A 86.455 347 13 13 2166 2499 74677518 74677193 1.620000e-92 350.0
52 TraesCS3D01G098700 chr7A 92.929 99 7 0 1980 2078 617635518 617635420 8.200000e-31 145.0
53 TraesCS3D01G098700 chr7A 92.632 95 7 0 1980 2074 133053338 133053244 1.370000e-28 137.0
54 TraesCS3D01G098700 chr7A 78.238 193 35 4 1004 1192 26665137 26664948 1.790000e-22 117.0
55 TraesCS3D01G098700 chr7A 94.203 69 1 2 2608 2675 74677132 74677066 5.000000e-18 102.0
56 TraesCS3D01G098700 chr7A 97.368 38 1 0 2573 2610 74677195 74677158 6.560000e-07 65.8
57 TraesCS3D01G098700 chr5B 93.011 186 13 0 991 1176 685219197 685219012 3.600000e-69 272.0
58 TraesCS3D01G098700 chr6A 85.405 185 22 3 1986 2166 570011695 570011512 1.340000e-43 187.0
59 TraesCS3D01G098700 chr2D 92.308 117 9 0 1 117 626216452 626216568 1.750000e-37 167.0
60 TraesCS3D01G098700 chrUn 93.750 96 5 1 2072 2166 96211887 96211792 2.950000e-30 143.0
61 TraesCS3D01G098700 chrUn 91.919 99 8 0 1976 2074 103936308 103936210 3.810000e-29 139.0
62 TraesCS3D01G098700 chr4B 92.632 95 7 0 2072 2166 456379090 456378996 1.370000e-28 137.0
63 TraesCS3D01G098700 chr6B 88.991 109 11 1 1967 2074 706650292 706650400 1.770000e-27 134.0
64 TraesCS3D01G098700 chr5A 91.667 96 7 1 2072 2166 671398085 671398180 6.380000e-27 132.0
65 TraesCS3D01G098700 chr7B 89.583 96 9 1 2072 2166 490352570 490352475 1.380000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G098700 chr3D 50399324 50402162 2838 True 5243.00 5243 100.000000 1 2839 1 chr3D.!!$R1 2838
1 TraesCS3D01G098700 chr3D 45356191 45356790 599 False 204.00 217 86.325000 997 1654 2 chr3D.!!$F3 657
2 TraesCS3D01G098700 chr3A 63475674 63477224 1550 True 629.00 1192 89.120333 777 2619 3 chr3A.!!$R3 1842
3 TraesCS3D01G098700 chr3A 15342998 15343612 614 False 304.50 357 93.268500 989 1677 2 chr3A.!!$F2 688
4 TraesCS3D01G098700 chr3A 57148252 57148977 725 True 300.50 377 90.212000 984 1676 2 chr3A.!!$R2 692
5 TraesCS3D01G098700 chr3B 79954368 79956362 1994 True 420.25 1153 91.832250 777 2839 4 chr3B.!!$R2 2062
6 TraesCS3D01G098700 chr7D 572438865 572439517 652 True 957.00 957 93.151000 119 772 1 chr7D.!!$R2 653
7 TraesCS3D01G098700 chr7D 572414280 572414932 652 False 946.00 946 92.846000 119 772 1 chr7D.!!$F4 653
8 TraesCS3D01G098700 chr7D 17217686 17218342 656 False 850.00 850 89.970000 108 772 1 chr7D.!!$F2 664
9 TraesCS3D01G098700 chr7D 63562099 63562766 667 True 839.00 839 89.450000 108 773 1 chr7D.!!$R1 665
10 TraesCS3D01G098700 chr4D 13211919 13212582 663 True 902.00 902 91.194000 108 773 1 chr4D.!!$R1 665
11 TraesCS3D01G098700 chr5D 385122476 385123138 662 True 876.00 876 90.569000 108 771 1 chr5D.!!$R3 663
12 TraesCS3D01G098700 chr4A 625784355 625785326 971 True 872.00 872 83.103000 973 1971 1 chr4A.!!$R1 998
13 TraesCS3D01G098700 chr1D 379578494 379579154 660 False 865.00 865 90.419000 108 767 1 chr1D.!!$F3 659
14 TraesCS3D01G098700 chr6D 78061412 78062072 660 False 854.00 854 90.105000 108 767 1 chr6D.!!$F1 659
15 TraesCS3D01G098700 chr6D 407179082 407179739 657 False 850.00 850 89.955000 108 772 1 chr6D.!!$F2 664

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
775 786 0.036306 AACACGAAATTCGGCCTCCT 59.964 50.0 19.95 0.0 45.59 3.69 F
943 970 0.036858 AAGTGAGGAAAGAGCGAGGC 60.037 55.0 0.00 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1791 1938 0.165944 GAGGAAATGCAACGTGACGG 59.834 55.0 10.66 0.0 0.00 4.79 R
2169 2318 0.178967 TCATGCAAAAGGACCAGCCA 60.179 50.0 0.00 0.0 40.02 4.75 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 4.397348 ACGAAGTGGGACCAATGC 57.603 55.556 0.00 0.00 42.51 3.56
27 28 1.761174 ACGAAGTGGGACCAATGCT 59.239 52.632 0.00 0.00 42.51 3.79
28 29 0.321653 ACGAAGTGGGACCAATGCTC 60.322 55.000 0.00 0.00 42.51 4.26
29 30 1.361668 CGAAGTGGGACCAATGCTCG 61.362 60.000 0.00 0.00 0.00 5.03
30 31 1.648467 GAAGTGGGACCAATGCTCGC 61.648 60.000 0.00 0.00 0.00 5.03
31 32 2.359850 GTGGGACCAATGCTCGCA 60.360 61.111 0.00 0.00 0.00 5.10
32 33 1.750399 GTGGGACCAATGCTCGCAT 60.750 57.895 0.00 0.00 38.46 4.73
33 34 1.001020 TGGGACCAATGCTCGCATT 60.001 52.632 11.11 11.11 46.35 3.56
34 35 0.254462 TGGGACCAATGCTCGCATTA 59.746 50.000 15.94 0.00 43.92 1.90
35 36 0.947244 GGGACCAATGCTCGCATTAG 59.053 55.000 15.94 11.91 43.92 1.73
36 37 1.668419 GGACCAATGCTCGCATTAGT 58.332 50.000 15.94 14.91 43.92 2.24
37 38 1.599542 GGACCAATGCTCGCATTAGTC 59.400 52.381 24.98 24.98 46.59 2.59
38 39 1.599542 GACCAATGCTCGCATTAGTCC 59.400 52.381 23.53 11.74 43.86 3.85
39 40 0.947244 CCAATGCTCGCATTAGTCCC 59.053 55.000 15.94 0.00 43.92 4.46
40 41 0.583438 CAATGCTCGCATTAGTCCCG 59.417 55.000 15.94 0.61 43.92 5.14
41 42 0.464036 AATGCTCGCATTAGTCCCGA 59.536 50.000 14.92 0.00 43.92 5.14
42 43 0.681733 ATGCTCGCATTAGTCCCGAT 59.318 50.000 0.00 0.00 31.82 4.18
43 44 0.464036 TGCTCGCATTAGTCCCGATT 59.536 50.000 0.00 0.00 0.00 3.34
44 45 1.140816 GCTCGCATTAGTCCCGATTC 58.859 55.000 0.00 0.00 0.00 2.52
45 46 1.409412 CTCGCATTAGTCCCGATTCG 58.591 55.000 0.00 0.00 0.00 3.34
46 47 0.742505 TCGCATTAGTCCCGATTCGT 59.257 50.000 5.20 0.00 0.00 3.85
47 48 0.852777 CGCATTAGTCCCGATTCGTG 59.147 55.000 5.20 0.00 0.00 4.35
48 49 1.535226 CGCATTAGTCCCGATTCGTGA 60.535 52.381 5.20 0.00 0.00 4.35
49 50 2.755650 GCATTAGTCCCGATTCGTGAT 58.244 47.619 5.20 0.00 0.00 3.06
50 51 3.131396 GCATTAGTCCCGATTCGTGATT 58.869 45.455 5.20 0.00 0.00 2.57
51 52 3.059597 GCATTAGTCCCGATTCGTGATTG 60.060 47.826 5.20 0.00 0.00 2.67
52 53 4.368315 CATTAGTCCCGATTCGTGATTGA 58.632 43.478 5.20 0.00 0.00 2.57
53 54 4.459390 TTAGTCCCGATTCGTGATTGAA 57.541 40.909 5.20 0.00 0.00 2.69
54 55 2.618053 AGTCCCGATTCGTGATTGAAC 58.382 47.619 5.20 0.00 0.00 3.18
55 56 1.664151 GTCCCGATTCGTGATTGAACC 59.336 52.381 5.20 0.00 0.00 3.62
56 57 0.650512 CCCGATTCGTGATTGAACCG 59.349 55.000 5.20 0.00 34.59 4.44
58 59 0.650512 CGATTCGTGATTGAACCGGG 59.349 55.000 6.32 0.00 31.10 5.73
59 60 1.737696 CGATTCGTGATTGAACCGGGA 60.738 52.381 6.32 0.00 31.10 5.14
60 61 1.664151 GATTCGTGATTGAACCGGGAC 59.336 52.381 6.32 0.00 0.00 4.46
61 62 0.682852 TTCGTGATTGAACCGGGACT 59.317 50.000 6.32 0.00 0.00 3.85
62 63 1.548081 TCGTGATTGAACCGGGACTA 58.452 50.000 6.32 0.00 0.00 2.59
63 64 1.894466 TCGTGATTGAACCGGGACTAA 59.106 47.619 6.32 0.00 0.00 2.24
64 65 2.498481 TCGTGATTGAACCGGGACTAAT 59.502 45.455 6.32 0.27 0.00 1.73
65 66 2.607635 CGTGATTGAACCGGGACTAATG 59.392 50.000 6.32 0.00 0.00 1.90
66 67 3.606687 GTGATTGAACCGGGACTAATGT 58.393 45.455 6.32 0.00 0.00 2.71
67 68 3.374058 GTGATTGAACCGGGACTAATGTG 59.626 47.826 6.32 0.00 0.00 3.21
68 69 2.483014 TTGAACCGGGACTAATGTGG 57.517 50.000 6.32 0.00 0.00 4.17
69 70 1.646912 TGAACCGGGACTAATGTGGA 58.353 50.000 6.32 0.00 0.00 4.02
70 71 2.193127 TGAACCGGGACTAATGTGGAT 58.807 47.619 6.32 0.00 0.00 3.41
71 72 3.376636 TGAACCGGGACTAATGTGGATA 58.623 45.455 6.32 0.00 0.00 2.59
72 73 3.971305 TGAACCGGGACTAATGTGGATAT 59.029 43.478 6.32 0.00 0.00 1.63
73 74 4.410883 TGAACCGGGACTAATGTGGATATT 59.589 41.667 6.32 0.00 0.00 1.28
74 75 4.351874 ACCGGGACTAATGTGGATATTG 57.648 45.455 6.32 0.00 0.00 1.90
75 76 3.074412 CCGGGACTAATGTGGATATTGC 58.926 50.000 0.00 0.00 0.00 3.56
76 77 3.074412 CGGGACTAATGTGGATATTGCC 58.926 50.000 0.00 0.00 0.00 4.52
77 78 3.421844 GGGACTAATGTGGATATTGCCC 58.578 50.000 0.00 0.00 0.00 5.36
78 79 3.074538 GGGACTAATGTGGATATTGCCCT 59.925 47.826 0.00 0.00 30.77 5.19
79 80 4.288626 GGGACTAATGTGGATATTGCCCTA 59.711 45.833 0.00 0.00 30.77 3.53
80 81 5.044846 GGGACTAATGTGGATATTGCCCTAT 60.045 44.000 0.00 0.00 30.77 2.57
81 82 5.882557 GGACTAATGTGGATATTGCCCTATG 59.117 44.000 0.00 0.00 0.00 2.23
82 83 6.296432 GGACTAATGTGGATATTGCCCTATGA 60.296 42.308 0.00 0.00 0.00 2.15
83 84 6.476378 ACTAATGTGGATATTGCCCTATGAC 58.524 40.000 0.00 0.00 0.00 3.06
84 85 3.788227 TGTGGATATTGCCCTATGACC 57.212 47.619 0.00 0.00 0.00 4.02
85 86 3.052329 TGTGGATATTGCCCTATGACCA 58.948 45.455 0.00 0.00 0.00 4.02
86 87 3.461458 TGTGGATATTGCCCTATGACCAA 59.539 43.478 0.00 0.00 0.00 3.67
87 88 4.079500 TGTGGATATTGCCCTATGACCAAA 60.080 41.667 0.00 0.00 0.00 3.28
88 89 4.520492 GTGGATATTGCCCTATGACCAAAG 59.480 45.833 0.00 0.00 0.00 2.77
89 90 3.507622 GGATATTGCCCTATGACCAAAGC 59.492 47.826 0.00 0.00 0.00 3.51
90 91 1.780503 ATTGCCCTATGACCAAAGCC 58.219 50.000 0.00 0.00 0.00 4.35
91 92 0.324275 TTGCCCTATGACCAAAGCCC 60.324 55.000 0.00 0.00 0.00 5.19
92 93 1.306296 GCCCTATGACCAAAGCCCA 59.694 57.895 0.00 0.00 0.00 5.36
93 94 0.753111 GCCCTATGACCAAAGCCCAG 60.753 60.000 0.00 0.00 0.00 4.45
94 95 0.625849 CCCTATGACCAAAGCCCAGT 59.374 55.000 0.00 0.00 0.00 4.00
95 96 1.005924 CCCTATGACCAAAGCCCAGTT 59.994 52.381 0.00 0.00 0.00 3.16
96 97 2.557452 CCCTATGACCAAAGCCCAGTTT 60.557 50.000 0.00 0.00 0.00 2.66
97 98 3.165071 CCTATGACCAAAGCCCAGTTTT 58.835 45.455 0.00 0.00 0.00 2.43
98 99 3.193479 CCTATGACCAAAGCCCAGTTTTC 59.807 47.826 0.00 0.00 0.00 2.29
99 100 2.452600 TGACCAAAGCCCAGTTTTCT 57.547 45.000 0.00 0.00 0.00 2.52
100 101 3.586470 TGACCAAAGCCCAGTTTTCTA 57.414 42.857 0.00 0.00 0.00 2.10
101 102 3.219281 TGACCAAAGCCCAGTTTTCTAC 58.781 45.455 0.00 0.00 0.00 2.59
102 103 3.117663 TGACCAAAGCCCAGTTTTCTACT 60.118 43.478 0.00 0.00 37.68 2.57
103 104 4.103469 TGACCAAAGCCCAGTTTTCTACTA 59.897 41.667 0.00 0.00 34.56 1.82
104 105 4.652822 ACCAAAGCCCAGTTTTCTACTAG 58.347 43.478 0.00 0.00 34.56 2.57
105 106 4.104261 ACCAAAGCCCAGTTTTCTACTAGT 59.896 41.667 0.00 0.00 34.56 2.57
106 107 4.455877 CCAAAGCCCAGTTTTCTACTAGTG 59.544 45.833 5.39 0.00 34.56 2.74
436 441 3.829026 GGGGAAGAAAAGATGAAACTGCT 59.171 43.478 0.00 0.00 0.00 4.24
469 476 2.045132 AGGGGTGGAGATGGGCAT 59.955 61.111 0.00 0.00 0.00 4.40
549 559 1.226888 GGTTAGACAGGCTACCGCG 60.227 63.158 0.00 0.00 36.88 6.46
608 618 4.700365 CGTCTCCGCGTGCTGACA 62.700 66.667 4.92 0.00 0.00 3.58
757 768 9.225436 GAATTTATATGGCAAAAGGGTCAAAAA 57.775 29.630 0.00 0.00 0.00 1.94
773 784 2.699251 AAAACACGAAATTCGGCCTC 57.301 45.000 19.95 0.00 45.59 4.70
774 785 0.879090 AAACACGAAATTCGGCCTCC 59.121 50.000 19.95 0.00 45.59 4.30
775 786 0.036306 AACACGAAATTCGGCCTCCT 59.964 50.000 19.95 0.00 45.59 3.69
779 790 1.291132 CGAAATTCGGCCTCCTTCTC 58.709 55.000 7.61 0.00 36.00 2.87
812 823 2.355108 CCGTCACCTCAATCCAATCTGT 60.355 50.000 0.00 0.00 0.00 3.41
813 824 3.338249 CGTCACCTCAATCCAATCTGTT 58.662 45.455 0.00 0.00 0.00 3.16
823 834 2.187073 CAATCTGTTGGCCAGCTCC 58.813 57.895 21.11 4.06 41.25 4.70
839 853 1.202746 GCTCCTGCTATTCTTCCCCTG 60.203 57.143 0.00 0.00 36.03 4.45
850 865 4.569719 TTCTTCCCCTGTCAAATACTCC 57.430 45.455 0.00 0.00 0.00 3.85
853 868 2.626785 TCCCCTGTCAAATACTCCACA 58.373 47.619 0.00 0.00 0.00 4.17
854 869 2.571653 TCCCCTGTCAAATACTCCACAG 59.428 50.000 0.00 0.00 36.75 3.66
856 871 2.002586 CCTGTCAAATACTCCACAGCG 58.997 52.381 0.00 0.00 35.83 5.18
896 920 5.428131 ACTCAAGCCTATTCATTTCTCCTCT 59.572 40.000 0.00 0.00 0.00 3.69
897 921 6.613271 ACTCAAGCCTATTCATTTCTCCTCTA 59.387 38.462 0.00 0.00 0.00 2.43
901 925 6.330218 AGCCTATTCATTTCTCCTCTATCCT 58.670 40.000 0.00 0.00 0.00 3.24
902 926 6.440328 AGCCTATTCATTTCTCCTCTATCCTC 59.560 42.308 0.00 0.00 0.00 3.71
903 927 6.627065 GCCTATTCATTTCTCCTCTATCCTCG 60.627 46.154 0.00 0.00 0.00 4.63
904 928 4.592485 TTCATTTCTCCTCTATCCTCGC 57.408 45.455 0.00 0.00 0.00 5.03
905 929 2.894126 TCATTTCTCCTCTATCCTCGCC 59.106 50.000 0.00 0.00 0.00 5.54
906 930 2.454336 TTTCTCCTCTATCCTCGCCA 57.546 50.000 0.00 0.00 0.00 5.69
907 931 1.988293 TTCTCCTCTATCCTCGCCAG 58.012 55.000 0.00 0.00 0.00 4.85
923 947 2.111043 AGTCGCCACCACACAAGG 59.889 61.111 0.00 0.00 0.00 3.61
924 948 2.110213 GTCGCCACCACACAAGGA 59.890 61.111 0.00 0.00 0.00 3.36
942 969 1.404851 GGAAGTGAGGAAAGAGCGAGG 60.405 57.143 0.00 0.00 0.00 4.63
943 970 0.036858 AAGTGAGGAAAGAGCGAGGC 60.037 55.000 0.00 0.00 0.00 4.70
947 974 2.815647 GGAAAGAGCGAGGCACCG 60.816 66.667 0.00 0.00 0.00 4.94
1410 1526 1.079819 CATGACGGAGAGTTGCGGT 60.080 57.895 0.00 0.00 43.03 5.68
1494 1628 4.452733 GAAGGTCCGGTGGCGGAG 62.453 72.222 0.00 0.00 38.90 4.63
1654 1788 1.536943 GCTCCAGGAGAAGACCGTGT 61.537 60.000 21.89 0.00 34.73 4.49
1655 1789 0.528470 CTCCAGGAGAAGACCGTGTC 59.472 60.000 11.62 0.00 34.73 3.67
1682 1816 3.452990 TCGGCTATGACCAGGTGATTTTA 59.547 43.478 0.00 0.00 0.00 1.52
1757 1891 6.324561 TCTCTCTCTTCCATTCGATATGTG 57.675 41.667 0.00 0.00 0.00 3.21
1783 1930 6.778834 TCTTAACCATGTGCATCAATCAAT 57.221 33.333 0.00 0.00 0.00 2.57
1784 1931 6.798482 TCTTAACCATGTGCATCAATCAATC 58.202 36.000 0.00 0.00 0.00 2.67
1785 1932 6.377712 TCTTAACCATGTGCATCAATCAATCA 59.622 34.615 0.00 0.00 0.00 2.57
1786 1933 5.408880 AACCATGTGCATCAATCAATCAA 57.591 34.783 0.00 0.00 0.00 2.57
1791 1938 6.019075 CCATGTGCATCAATCAATCAATCAAC 60.019 38.462 0.00 0.00 0.00 3.18
1834 1981 2.978156 TTTTGCAGGGTCTGGAGATT 57.022 45.000 0.00 0.00 32.58 2.40
1882 2029 0.179067 TGCTCACCGACGTTTTCCTT 60.179 50.000 0.00 0.00 0.00 3.36
1913 2062 1.822186 AACGCTTGAAGGCACGGTT 60.822 52.632 0.00 0.00 0.00 4.44
1957 2106 2.024176 TGGAAAAGTAGCTCGATGCC 57.976 50.000 0.00 0.00 44.23 4.40
1971 2120 1.719600 GATGCCTCGATCCATGTAGC 58.280 55.000 3.03 0.00 0.00 3.58
1972 2121 1.274728 GATGCCTCGATCCATGTAGCT 59.725 52.381 3.03 0.00 0.00 3.32
1973 2122 1.995376 TGCCTCGATCCATGTAGCTA 58.005 50.000 0.00 0.00 0.00 3.32
1974 2123 2.316108 TGCCTCGATCCATGTAGCTAA 58.684 47.619 0.00 0.00 0.00 3.09
1975 2124 2.899900 TGCCTCGATCCATGTAGCTAAT 59.100 45.455 0.00 0.00 0.00 1.73
1976 2125 3.257393 GCCTCGATCCATGTAGCTAATG 58.743 50.000 0.00 2.13 0.00 1.90
1978 2127 4.800914 GCCTCGATCCATGTAGCTAATGTT 60.801 45.833 0.00 0.00 0.00 2.71
1979 2128 5.566826 GCCTCGATCCATGTAGCTAATGTTA 60.567 44.000 0.00 0.00 0.00 2.41
1980 2129 6.455647 CCTCGATCCATGTAGCTAATGTTAA 58.544 40.000 0.00 0.00 0.00 2.01
1981 2130 6.587990 CCTCGATCCATGTAGCTAATGTTAAG 59.412 42.308 0.00 0.00 0.00 1.85
1982 2131 7.050970 TCGATCCATGTAGCTAATGTTAAGT 57.949 36.000 0.00 0.00 0.00 2.24
1983 2132 8.173542 TCGATCCATGTAGCTAATGTTAAGTA 57.826 34.615 0.00 0.00 0.00 2.24
1984 2133 8.080417 TCGATCCATGTAGCTAATGTTAAGTAC 58.920 37.037 0.00 0.00 0.00 2.73
1985 2134 8.082852 CGATCCATGTAGCTAATGTTAAGTACT 58.917 37.037 0.00 0.00 0.00 2.73
1986 2135 9.413048 GATCCATGTAGCTAATGTTAAGTACTC 57.587 37.037 0.00 0.00 0.00 2.59
1987 2136 7.723324 TCCATGTAGCTAATGTTAAGTACTCC 58.277 38.462 0.00 0.00 0.00 3.85
1988 2137 6.929606 CCATGTAGCTAATGTTAAGTACTCCC 59.070 42.308 0.00 0.00 0.00 4.30
1989 2138 7.202011 CCATGTAGCTAATGTTAAGTACTCCCT 60.202 40.741 0.00 0.00 0.00 4.20
1990 2139 7.344095 TGTAGCTAATGTTAAGTACTCCCTC 57.656 40.000 0.00 0.00 0.00 4.30
1991 2140 5.873146 AGCTAATGTTAAGTACTCCCTCC 57.127 43.478 0.00 0.00 0.00 4.30
1992 2141 4.341520 AGCTAATGTTAAGTACTCCCTCCG 59.658 45.833 0.00 0.00 0.00 4.63
1993 2142 4.099113 GCTAATGTTAAGTACTCCCTCCGT 59.901 45.833 0.00 0.00 0.00 4.69
1994 2143 5.394993 GCTAATGTTAAGTACTCCCTCCGTT 60.395 44.000 0.00 0.00 0.00 4.44
1995 2144 5.494390 AATGTTAAGTACTCCCTCCGTTT 57.506 39.130 0.00 0.00 0.00 3.60
1996 2145 4.525912 TGTTAAGTACTCCCTCCGTTTC 57.474 45.455 0.00 0.00 0.00 2.78
1997 2146 3.896888 TGTTAAGTACTCCCTCCGTTTCA 59.103 43.478 0.00 0.00 0.00 2.69
1998 2147 4.344679 TGTTAAGTACTCCCTCCGTTTCAA 59.655 41.667 0.00 0.00 0.00 2.69
1999 2148 5.163322 TGTTAAGTACTCCCTCCGTTTCAAA 60.163 40.000 0.00 0.00 0.00 2.69
2000 2149 4.635699 AAGTACTCCCTCCGTTTCAAAT 57.364 40.909 0.00 0.00 0.00 2.32
2001 2150 4.635699 AGTACTCCCTCCGTTTCAAATT 57.364 40.909 0.00 0.00 0.00 1.82
2002 2151 5.750352 AGTACTCCCTCCGTTTCAAATTA 57.250 39.130 0.00 0.00 0.00 1.40
2003 2152 5.485620 AGTACTCCCTCCGTTTCAAATTAC 58.514 41.667 0.00 0.00 0.00 1.89
2004 2153 4.635699 ACTCCCTCCGTTTCAAATTACT 57.364 40.909 0.00 0.00 0.00 2.24
2005 2154 4.576879 ACTCCCTCCGTTTCAAATTACTC 58.423 43.478 0.00 0.00 0.00 2.59
2006 2155 3.592059 TCCCTCCGTTTCAAATTACTCG 58.408 45.455 0.00 0.00 0.00 4.18
2007 2156 3.007182 TCCCTCCGTTTCAAATTACTCGT 59.993 43.478 0.00 0.00 0.00 4.18
2008 2157 3.749609 CCCTCCGTTTCAAATTACTCGTT 59.250 43.478 0.00 0.00 0.00 3.85
2009 2158 4.378046 CCCTCCGTTTCAAATTACTCGTTG 60.378 45.833 0.00 0.00 0.00 4.10
2010 2159 4.136517 TCCGTTTCAAATTACTCGTTGC 57.863 40.909 0.00 0.00 0.00 4.17
2011 2160 3.560481 TCCGTTTCAAATTACTCGTTGCA 59.440 39.130 0.00 0.00 0.00 4.08
2012 2161 3.662186 CCGTTTCAAATTACTCGTTGCAC 59.338 43.478 0.00 0.00 0.00 4.57
2013 2162 4.275662 CGTTTCAAATTACTCGTTGCACA 58.724 39.130 0.00 0.00 0.00 4.57
2014 2163 4.731000 CGTTTCAAATTACTCGTTGCACAA 59.269 37.500 0.00 0.00 0.00 3.33
2015 2164 5.228220 CGTTTCAAATTACTCGTTGCACAAA 59.772 36.000 0.00 0.00 0.00 2.83
2016 2165 6.075099 CGTTTCAAATTACTCGTTGCACAAAT 60.075 34.615 0.00 0.00 0.00 2.32
2017 2166 6.746104 TTCAAATTACTCGTTGCACAAATG 57.254 33.333 0.00 0.00 0.00 2.32
2018 2167 5.218885 TCAAATTACTCGTTGCACAAATGG 58.781 37.500 0.00 0.00 0.00 3.16
2019 2168 5.009110 TCAAATTACTCGTTGCACAAATGGA 59.991 36.000 0.00 0.00 0.00 3.41
2020 2169 3.889196 TTACTCGTTGCACAAATGGAC 57.111 42.857 0.00 0.00 0.00 4.02
2021 2170 0.586319 ACTCGTTGCACAAATGGACG 59.414 50.000 0.00 0.00 0.00 4.79
2022 2171 0.586319 CTCGTTGCACAAATGGACGT 59.414 50.000 4.91 0.00 0.00 4.34
2023 2172 1.795872 CTCGTTGCACAAATGGACGTA 59.204 47.619 4.91 0.00 0.00 3.57
2024 2173 2.415168 CTCGTTGCACAAATGGACGTAT 59.585 45.455 4.91 0.00 0.00 3.06
2025 2174 2.413796 TCGTTGCACAAATGGACGTATC 59.586 45.455 4.91 0.00 0.00 2.24
2026 2175 2.415168 CGTTGCACAAATGGACGTATCT 59.585 45.455 0.00 0.00 0.00 1.98
2027 2176 3.615056 CGTTGCACAAATGGACGTATCTA 59.385 43.478 0.00 0.00 0.00 1.98
2028 2177 4.259810 CGTTGCACAAATGGACGTATCTAG 60.260 45.833 0.00 0.00 0.00 2.43
2029 2178 4.729227 TGCACAAATGGACGTATCTAGA 57.271 40.909 0.00 0.00 0.00 2.43
2030 2179 5.079689 TGCACAAATGGACGTATCTAGAA 57.920 39.130 0.00 0.00 0.00 2.10
2031 2180 4.868171 TGCACAAATGGACGTATCTAGAAC 59.132 41.667 0.00 0.00 0.00 3.01
2032 2181 5.109903 GCACAAATGGACGTATCTAGAACT 58.890 41.667 0.00 0.00 0.00 3.01
2033 2182 6.127563 TGCACAAATGGACGTATCTAGAACTA 60.128 38.462 0.00 0.00 0.00 2.24
2034 2183 6.755141 GCACAAATGGACGTATCTAGAACTAA 59.245 38.462 0.00 0.00 0.00 2.24
2035 2184 7.277098 GCACAAATGGACGTATCTAGAACTAAA 59.723 37.037 0.00 0.00 0.00 1.85
2036 2185 9.146984 CACAAATGGACGTATCTAGAACTAAAA 57.853 33.333 0.00 0.00 0.00 1.52
2037 2186 9.886132 ACAAATGGACGTATCTAGAACTAAAAT 57.114 29.630 0.00 0.00 0.00 1.82
2061 2210 6.003234 ACATCTAGATACATCTACACGTGC 57.997 41.667 17.22 0.00 38.32 5.34
2062 2211 4.727235 TCTAGATACATCTACACGTGCG 57.273 45.455 17.22 7.33 38.32 5.34
2063 2212 4.374399 TCTAGATACATCTACACGTGCGA 58.626 43.478 17.22 13.12 38.32 5.10
2064 2213 3.335786 AGATACATCTACACGTGCGAC 57.664 47.619 17.22 0.46 34.85 5.19
2065 2214 2.681344 AGATACATCTACACGTGCGACA 59.319 45.455 17.22 0.00 34.85 4.35
2066 2215 2.993449 TACATCTACACGTGCGACAA 57.007 45.000 17.22 0.00 0.00 3.18
2067 2216 1.698165 ACATCTACACGTGCGACAAG 58.302 50.000 17.22 5.82 0.00 3.16
2068 2217 1.000607 ACATCTACACGTGCGACAAGT 60.001 47.619 17.22 9.35 0.00 3.16
2069 2218 2.227149 ACATCTACACGTGCGACAAGTA 59.773 45.455 17.22 0.00 0.00 2.24
2070 2219 3.239254 CATCTACACGTGCGACAAGTAA 58.761 45.455 17.22 0.00 0.00 2.24
2071 2220 3.564235 TCTACACGTGCGACAAGTAAT 57.436 42.857 17.22 0.00 0.00 1.89
2072 2221 3.904571 TCTACACGTGCGACAAGTAATT 58.095 40.909 17.22 0.00 0.00 1.40
2073 2222 3.916172 TCTACACGTGCGACAAGTAATTC 59.084 43.478 17.22 0.00 0.00 2.17
2074 2223 1.796459 ACACGTGCGACAAGTAATTCC 59.204 47.619 17.22 0.00 0.00 3.01
2075 2224 1.795872 CACGTGCGACAAGTAATTCCA 59.204 47.619 0.82 0.00 0.00 3.53
2076 2225 2.222213 CACGTGCGACAAGTAATTCCAA 59.778 45.455 0.82 0.00 0.00 3.53
2077 2226 2.873472 ACGTGCGACAAGTAATTCCAAA 59.127 40.909 0.00 0.00 0.00 3.28
2078 2227 3.500680 ACGTGCGACAAGTAATTCCAAAT 59.499 39.130 0.00 0.00 0.00 2.32
2079 2228 4.023536 ACGTGCGACAAGTAATTCCAAATT 60.024 37.500 0.00 0.00 0.00 1.82
2080 2229 5.179742 ACGTGCGACAAGTAATTCCAAATTA 59.820 36.000 0.00 0.00 0.00 1.40
2081 2230 5.506832 CGTGCGACAAGTAATTCCAAATTAC 59.493 40.000 12.51 12.51 35.36 1.89
2082 2231 6.608610 GTGCGACAAGTAATTCCAAATTACT 58.391 36.000 15.83 15.83 44.16 2.24
2083 2232 6.741358 GTGCGACAAGTAATTCCAAATTACTC 59.259 38.462 19.84 11.12 42.19 2.59
2084 2233 5.957796 GCGACAAGTAATTCCAAATTACTCG 59.042 40.000 19.84 19.09 42.19 4.18
2085 2234 6.401796 GCGACAAGTAATTCCAAATTACTCGT 60.402 38.462 19.84 16.62 42.19 4.18
2086 2235 7.171434 CGACAAGTAATTCCAAATTACTCGTC 58.829 38.462 22.26 22.26 42.19 4.20
2087 2236 7.148705 CGACAAGTAATTCCAAATTACTCGTCA 60.149 37.037 26.93 0.00 43.44 4.35
2088 2237 7.803724 ACAAGTAATTCCAAATTACTCGTCAC 58.196 34.615 19.84 0.16 42.19 3.67
2089 2238 7.442969 ACAAGTAATTCCAAATTACTCGTCACA 59.557 33.333 19.84 0.00 42.19 3.58
2090 2239 7.360575 AGTAATTCCAAATTACTCGTCACAC 57.639 36.000 15.83 0.00 39.80 3.82
2091 2240 6.932400 AGTAATTCCAAATTACTCGTCACACA 59.068 34.615 15.83 0.00 39.80 3.72
2092 2241 6.627395 AATTCCAAATTACTCGTCACACAA 57.373 33.333 0.00 0.00 0.00 3.33
2093 2242 6.627395 ATTCCAAATTACTCGTCACACAAA 57.373 33.333 0.00 0.00 0.00 2.83
2094 2243 6.627395 TTCCAAATTACTCGTCACACAAAT 57.373 33.333 0.00 0.00 0.00 2.32
2095 2244 5.996219 TCCAAATTACTCGTCACACAAATG 58.004 37.500 0.00 0.00 0.00 2.32
2096 2245 5.049060 TCCAAATTACTCGTCACACAAATGG 60.049 40.000 0.00 0.00 0.00 3.16
2097 2246 5.049060 CCAAATTACTCGTCACACAAATGGA 60.049 40.000 0.00 0.00 0.00 3.41
2098 2247 6.349280 CCAAATTACTCGTCACACAAATGGAT 60.349 38.462 0.00 0.00 0.00 3.41
2099 2248 5.801350 ATTACTCGTCACACAAATGGATG 57.199 39.130 0.00 0.00 0.00 3.51
2100 2249 3.126001 ACTCGTCACACAAATGGATGT 57.874 42.857 0.00 0.00 0.00 3.06
2101 2250 4.265904 ACTCGTCACACAAATGGATGTA 57.734 40.909 0.00 0.00 30.84 2.29
2102 2251 4.832248 ACTCGTCACACAAATGGATGTAT 58.168 39.130 0.00 0.00 30.84 2.29
2103 2252 4.870426 ACTCGTCACACAAATGGATGTATC 59.130 41.667 0.00 0.00 30.84 2.24
2104 2253 5.084818 TCGTCACACAAATGGATGTATCT 57.915 39.130 0.00 0.00 30.84 1.98
2105 2254 6.127451 ACTCGTCACACAAATGGATGTATCTA 60.127 38.462 0.00 0.00 30.84 1.98
2106 2255 6.273071 TCGTCACACAAATGGATGTATCTAG 58.727 40.000 0.00 0.00 30.84 2.43
2107 2256 6.096282 TCGTCACACAAATGGATGTATCTAGA 59.904 38.462 0.00 0.00 30.84 2.43
2108 2257 6.756542 CGTCACACAAATGGATGTATCTAGAA 59.243 38.462 0.00 0.00 30.84 2.10
2109 2258 7.254117 CGTCACACAAATGGATGTATCTAGAAC 60.254 40.741 0.00 0.00 30.84 3.01
2110 2259 7.766278 GTCACACAAATGGATGTATCTAGAACT 59.234 37.037 0.00 0.00 30.84 3.01
2111 2260 8.977412 TCACACAAATGGATGTATCTAGAACTA 58.023 33.333 0.00 0.00 30.84 2.24
2112 2261 9.599866 CACACAAATGGATGTATCTAGAACTAA 57.400 33.333 0.00 0.00 30.84 2.24
2138 2287 6.582677 ACATCTAGATACATCTACACCTGC 57.417 41.667 4.54 0.00 38.32 4.85
2139 2288 5.182190 ACATCTAGATACATCTACACCTGCG 59.818 44.000 4.54 0.00 38.32 5.18
2140 2289 4.969484 TCTAGATACATCTACACCTGCGA 58.031 43.478 0.00 0.00 38.32 5.10
2141 2290 3.992260 AGATACATCTACACCTGCGAC 57.008 47.619 0.00 0.00 34.85 5.19
2142 2291 3.288092 AGATACATCTACACCTGCGACA 58.712 45.455 0.00 0.00 34.85 4.35
2143 2292 3.699538 AGATACATCTACACCTGCGACAA 59.300 43.478 0.00 0.00 34.85 3.18
2144 2293 2.370281 ACATCTACACCTGCGACAAG 57.630 50.000 0.00 0.00 0.00 3.16
2145 2294 1.618837 ACATCTACACCTGCGACAAGT 59.381 47.619 0.00 0.00 0.00 3.16
2146 2295 2.823747 ACATCTACACCTGCGACAAGTA 59.176 45.455 0.00 0.00 0.00 2.24
2147 2296 3.257375 ACATCTACACCTGCGACAAGTAA 59.743 43.478 0.00 0.00 0.00 2.24
2148 2297 4.081642 ACATCTACACCTGCGACAAGTAAT 60.082 41.667 0.00 0.00 0.00 1.89
2149 2298 4.530710 TCTACACCTGCGACAAGTAATT 57.469 40.909 0.00 0.00 0.00 1.40
2150 2299 4.491676 TCTACACCTGCGACAAGTAATTC 58.508 43.478 0.00 0.00 0.00 2.17
2151 2300 2.066262 ACACCTGCGACAAGTAATTCG 58.934 47.619 0.00 0.00 38.31 3.34
2152 2301 1.393539 CACCTGCGACAAGTAATTCGG 59.606 52.381 0.00 0.00 35.73 4.30
2153 2302 1.274167 ACCTGCGACAAGTAATTCGGA 59.726 47.619 0.00 0.00 35.73 4.55
2154 2303 2.289195 ACCTGCGACAAGTAATTCGGAA 60.289 45.455 0.00 0.00 35.02 4.30
2155 2304 2.093783 CCTGCGACAAGTAATTCGGAAC 59.906 50.000 0.00 0.00 35.02 3.62
2168 2317 3.600843 GGAACGGAGCGAGTAGGT 58.399 61.111 0.00 0.00 0.00 3.08
2169 2318 1.888736 GGAACGGAGCGAGTAGGTT 59.111 57.895 0.00 0.00 0.00 3.50
2170 2319 0.458025 GGAACGGAGCGAGTAGGTTG 60.458 60.000 0.00 0.00 0.00 3.77
2171 2320 0.458025 GAACGGAGCGAGTAGGTTGG 60.458 60.000 0.00 0.00 0.00 3.77
2172 2321 2.202756 CGGAGCGAGTAGGTTGGC 60.203 66.667 0.00 0.00 0.00 4.52
2173 2322 2.711922 CGGAGCGAGTAGGTTGGCT 61.712 63.158 0.00 0.00 38.70 4.75
2174 2323 1.153549 GGAGCGAGTAGGTTGGCTG 60.154 63.158 0.00 0.00 35.54 4.85
2175 2324 1.153549 GAGCGAGTAGGTTGGCTGG 60.154 63.158 0.00 0.00 35.54 4.85
2176 2325 1.889530 GAGCGAGTAGGTTGGCTGGT 61.890 60.000 0.00 0.00 35.54 4.00
2177 2326 1.448013 GCGAGTAGGTTGGCTGGTC 60.448 63.158 0.00 0.00 0.00 4.02
2178 2327 1.218316 CGAGTAGGTTGGCTGGTCC 59.782 63.158 0.00 0.00 0.00 4.46
2179 2328 1.258445 CGAGTAGGTTGGCTGGTCCT 61.258 60.000 0.00 0.00 35.26 3.85
2180 2329 0.984995 GAGTAGGTTGGCTGGTCCTT 59.015 55.000 0.00 0.00 35.26 3.36
2181 2330 1.351350 GAGTAGGTTGGCTGGTCCTTT 59.649 52.381 0.00 0.00 35.26 3.11
2182 2331 1.780919 AGTAGGTTGGCTGGTCCTTTT 59.219 47.619 0.00 0.00 35.26 2.27
2183 2332 1.886542 GTAGGTTGGCTGGTCCTTTTG 59.113 52.381 0.00 0.00 35.26 2.44
2184 2333 1.115326 AGGTTGGCTGGTCCTTTTGC 61.115 55.000 0.00 0.00 35.26 3.68
2185 2334 1.398958 GGTTGGCTGGTCCTTTTGCA 61.399 55.000 0.00 0.00 35.26 4.08
2186 2335 0.681175 GTTGGCTGGTCCTTTTGCAT 59.319 50.000 0.00 0.00 35.26 3.96
2187 2336 0.680618 TTGGCTGGTCCTTTTGCATG 59.319 50.000 0.00 0.00 35.26 4.06
2188 2337 0.178967 TGGCTGGTCCTTTTGCATGA 60.179 50.000 0.00 0.00 35.26 3.07
2189 2338 0.968405 GGCTGGTCCTTTTGCATGAA 59.032 50.000 0.00 0.00 0.00 2.57
2190 2339 1.337167 GGCTGGTCCTTTTGCATGAAC 60.337 52.381 0.00 0.00 0.00 3.18
2191 2340 1.340889 GCTGGTCCTTTTGCATGAACA 59.659 47.619 0.00 0.00 0.00 3.18
2192 2341 2.028748 GCTGGTCCTTTTGCATGAACAT 60.029 45.455 0.00 0.00 0.00 2.71
2193 2342 3.581755 CTGGTCCTTTTGCATGAACATG 58.418 45.455 10.04 10.04 41.60 3.21
2194 2343 2.964464 TGGTCCTTTTGCATGAACATGT 59.036 40.909 14.82 0.00 40.80 3.21
2195 2344 3.243805 TGGTCCTTTTGCATGAACATGTG 60.244 43.478 14.82 0.00 40.80 3.21
2196 2345 2.733026 GTCCTTTTGCATGAACATGTGC 59.267 45.455 14.82 0.00 40.80 4.57
2203 2352 1.458064 GCATGAACATGTGCAAACTGC 59.542 47.619 11.46 12.82 40.45 4.40
2204 2353 3.118364 GCATGAACATGTGCAAACTGCA 61.118 45.455 21.17 0.00 44.09 4.41
2216 2365 4.071875 GCAAACTGCAAAGACTAGTAGC 57.928 45.455 0.00 0.00 44.26 3.58
2217 2366 3.498397 GCAAACTGCAAAGACTAGTAGCA 59.502 43.478 0.00 3.51 44.26 3.49
2218 2367 4.611581 GCAAACTGCAAAGACTAGTAGCAC 60.612 45.833 0.00 0.00 44.26 4.40
2219 2368 3.320673 ACTGCAAAGACTAGTAGCACC 57.679 47.619 0.00 0.00 0.00 5.01
2220 2369 2.632996 ACTGCAAAGACTAGTAGCACCA 59.367 45.455 0.00 0.00 0.00 4.17
2221 2370 3.261897 ACTGCAAAGACTAGTAGCACCAT 59.738 43.478 0.00 0.00 0.00 3.55
2222 2371 3.861840 TGCAAAGACTAGTAGCACCATC 58.138 45.455 0.00 0.00 0.00 3.51
2223 2372 3.198872 GCAAAGACTAGTAGCACCATCC 58.801 50.000 0.00 0.00 0.00 3.51
2224 2373 3.369471 GCAAAGACTAGTAGCACCATCCA 60.369 47.826 0.00 0.00 0.00 3.41
2225 2374 4.832248 CAAAGACTAGTAGCACCATCCAA 58.168 43.478 0.00 0.00 0.00 3.53
2226 2375 5.431765 CAAAGACTAGTAGCACCATCCAAT 58.568 41.667 0.00 0.00 0.00 3.16
2227 2376 5.700402 AAGACTAGTAGCACCATCCAATT 57.300 39.130 0.00 0.00 0.00 2.32
2228 2377 6.808321 AAGACTAGTAGCACCATCCAATTA 57.192 37.500 0.00 0.00 0.00 1.40
2229 2378 6.412362 AGACTAGTAGCACCATCCAATTAG 57.588 41.667 0.00 0.00 0.00 1.73
2230 2379 5.305644 AGACTAGTAGCACCATCCAATTAGG 59.694 44.000 0.00 0.00 39.47 2.69
2231 2380 4.969359 ACTAGTAGCACCATCCAATTAGGT 59.031 41.667 0.00 0.00 39.02 3.08
2247 2396 6.375174 CCAATTAGGTGATGATCTTTGTGTGA 59.625 38.462 0.00 0.00 0.00 3.58
2248 2397 7.414873 CCAATTAGGTGATGATCTTTGTGTGAG 60.415 40.741 0.00 0.00 0.00 3.51
2321 2479 4.895224 TGGTACTAGTTAGATGCTCGTG 57.105 45.455 0.00 0.00 0.00 4.35
2322 2480 4.520179 TGGTACTAGTTAGATGCTCGTGA 58.480 43.478 0.00 0.00 0.00 4.35
2333 2491 2.988010 TGCTCGTGATCCAGCTTAAT 57.012 45.000 9.19 0.00 36.53 1.40
2335 2493 4.400529 TGCTCGTGATCCAGCTTAATTA 57.599 40.909 9.19 0.00 36.53 1.40
2343 2501 8.201464 TCGTGATCCAGCTTAATTAATCAGTTA 58.799 33.333 0.00 0.00 0.00 2.24
2364 2522 6.883756 AGTTACTCCAGGTTGTAGTAGTACTC 59.116 42.308 5.96 0.00 0.00 2.59
2365 2523 4.598022 ACTCCAGGTTGTAGTAGTACTCC 58.402 47.826 5.96 10.69 0.00 3.85
2366 2524 4.043812 ACTCCAGGTTGTAGTAGTACTCCA 59.956 45.833 5.96 0.00 0.00 3.86
2367 2525 4.338879 TCCAGGTTGTAGTAGTACTCCAC 58.661 47.826 5.96 0.94 0.00 4.02
2368 2526 4.043812 TCCAGGTTGTAGTAGTACTCCACT 59.956 45.833 5.96 0.28 41.62 4.00
2405 2563 1.094785 GTATGGGTTTGCATCGCAGT 58.905 50.000 12.82 6.20 40.61 4.40
2409 2567 1.165270 GGGTTTGCATCGCAGTTAGT 58.835 50.000 0.00 0.00 40.61 2.24
2410 2568 2.289756 TGGGTTTGCATCGCAGTTAGTA 60.290 45.455 5.35 0.00 40.61 1.82
2411 2569 2.095372 GGGTTTGCATCGCAGTTAGTAC 59.905 50.000 0.00 0.00 40.61 2.73
2412 2570 2.095372 GGTTTGCATCGCAGTTAGTACC 59.905 50.000 0.00 0.00 40.61 3.34
2444 2602 9.364989 CTTCTGTTGGTTCTCAAAATGTTTTTA 57.635 29.630 0.00 0.00 37.08 1.52
2554 2713 4.476752 GCGTGGGCGGTGGGAATA 62.477 66.667 0.00 0.00 38.78 1.75
2610 2769 3.932545 TGGTTCACCATACAAACATGC 57.067 42.857 0.00 0.00 42.01 4.06
2616 2804 2.101249 CACCATACAAACATGCCATCCC 59.899 50.000 0.00 0.00 0.00 3.85
2627 2815 1.058428 TGCCATCCCAGCATAGCTCT 61.058 55.000 0.00 0.00 36.40 4.09
2628 2816 0.321475 GCCATCCCAGCATAGCTCTC 60.321 60.000 0.00 0.00 36.40 3.20
2645 2833 3.434984 GCTCTCACCTTCTCAACACAATC 59.565 47.826 0.00 0.00 0.00 2.67
2669 2857 3.430862 GCAATGGGCGACAGCGAA 61.431 61.111 0.00 0.00 46.35 4.70
2674 2862 3.430862 GGGCGACAGCGAATGCAA 61.431 61.111 0.00 0.00 46.23 4.08
2675 2863 2.099062 GGCGACAGCGAATGCAAG 59.901 61.111 0.00 0.00 46.23 4.01
2683 2871 2.409870 GCGAATGCAAGGGGTCTGG 61.410 63.158 0.00 0.00 42.15 3.86
2705 2893 1.099879 GCTCTGATTCCGGCATTGCT 61.100 55.000 8.82 0.00 0.00 3.91
2711 2899 2.169561 TGATTCCGGCATTGCTACTGTA 59.830 45.455 8.82 0.00 0.00 2.74
2712 2900 2.772077 TTCCGGCATTGCTACTGTAA 57.228 45.000 8.82 0.00 0.00 2.41
2713 2901 2.018542 TCCGGCATTGCTACTGTAAC 57.981 50.000 8.82 0.00 0.00 2.50
2714 2902 1.276705 TCCGGCATTGCTACTGTAACA 59.723 47.619 8.82 0.00 0.00 2.41
2756 3240 5.056480 CAGAAATCGATACCCATGCACTTA 58.944 41.667 0.00 0.00 0.00 2.24
2764 3248 0.323725 CCCATGCACTTACCCTTGCT 60.324 55.000 0.00 0.00 39.62 3.91
2769 3253 2.660572 TGCACTTACCCTTGCTTCAAA 58.339 42.857 0.00 0.00 39.62 2.69
2770 3254 2.622942 TGCACTTACCCTTGCTTCAAAG 59.377 45.455 0.00 0.00 39.62 2.77
2773 3257 4.277423 GCACTTACCCTTGCTTCAAAGTTA 59.723 41.667 0.00 0.00 35.74 2.24
2786 3270 9.442047 TTGCTTCAAAGTTAAAAATCCAGAAAA 57.558 25.926 0.00 0.00 0.00 2.29
2823 3308 7.777095 AGCCTATTAAACACAAAACAAACTCA 58.223 30.769 0.00 0.00 0.00 3.41
2832 3317 9.467258 AAACACAAAACAAACTCATATGAGATG 57.533 29.630 34.16 29.92 44.74 2.90
2833 3318 7.086376 ACACAAAACAAACTCATATGAGATGC 58.914 34.615 34.16 0.00 44.74 3.91
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 0.874390 CATTGGTCCCACTTCGTGTG 59.126 55.000 4.75 4.75 45.80 3.82
7 8 0.889186 GCATTGGTCCCACTTCGTGT 60.889 55.000 0.00 0.00 0.00 4.49
8 9 0.606401 AGCATTGGTCCCACTTCGTG 60.606 55.000 0.00 0.00 0.00 4.35
9 10 0.321653 GAGCATTGGTCCCACTTCGT 60.322 55.000 4.48 0.00 0.00 3.85
10 11 1.361668 CGAGCATTGGTCCCACTTCG 61.362 60.000 10.11 0.00 0.00 3.79
11 12 1.648467 GCGAGCATTGGTCCCACTTC 61.648 60.000 10.11 0.00 0.00 3.01
12 13 1.675641 GCGAGCATTGGTCCCACTT 60.676 57.895 10.11 0.00 0.00 3.16
13 14 2.045926 GCGAGCATTGGTCCCACT 60.046 61.111 10.11 0.00 0.00 4.00
14 15 1.315257 AATGCGAGCATTGGTCCCAC 61.315 55.000 20.86 1.45 44.05 4.61
15 16 0.254462 TAATGCGAGCATTGGTCCCA 59.746 50.000 27.59 7.89 45.15 4.37
16 17 0.947244 CTAATGCGAGCATTGGTCCC 59.053 55.000 27.59 2.01 45.15 4.46
20 21 0.947244 GGGACTAATGCGAGCATTGG 59.053 55.000 27.59 26.51 45.15 3.16
21 22 0.583438 CGGGACTAATGCGAGCATTG 59.417 55.000 27.59 20.16 45.15 2.82
22 23 0.464036 TCGGGACTAATGCGAGCATT 59.536 50.000 24.09 24.09 46.85 3.56
23 24 0.681733 ATCGGGACTAATGCGAGCAT 59.318 50.000 4.52 4.52 38.46 3.79
24 25 0.464036 AATCGGGACTAATGCGAGCA 59.536 50.000 0.00 0.00 0.00 4.26
25 26 1.140816 GAATCGGGACTAATGCGAGC 58.859 55.000 0.00 0.00 0.00 5.03
26 27 1.269102 ACGAATCGGGACTAATGCGAG 60.269 52.381 7.80 0.00 0.00 5.03
27 28 0.742505 ACGAATCGGGACTAATGCGA 59.257 50.000 7.80 0.00 0.00 5.10
28 29 0.852777 CACGAATCGGGACTAATGCG 59.147 55.000 7.80 0.00 28.17 4.73
29 30 2.218953 TCACGAATCGGGACTAATGC 57.781 50.000 2.35 0.00 32.99 3.56
30 31 4.368315 TCAATCACGAATCGGGACTAATG 58.632 43.478 10.73 7.58 43.84 1.90
31 32 4.665833 TCAATCACGAATCGGGACTAAT 57.334 40.909 10.73 0.00 43.84 1.73
32 33 4.178540 GTTCAATCACGAATCGGGACTAA 58.821 43.478 10.73 1.77 43.84 2.24
33 34 3.429822 GGTTCAATCACGAATCGGGACTA 60.430 47.826 10.73 0.00 43.84 2.59
34 35 2.618053 GTTCAATCACGAATCGGGACT 58.382 47.619 10.73 0.00 43.84 3.85
35 36 1.664151 GGTTCAATCACGAATCGGGAC 59.336 52.381 10.73 0.00 43.84 4.46
36 37 1.737696 CGGTTCAATCACGAATCGGGA 60.738 52.381 10.96 10.96 45.56 5.14
37 38 0.650512 CGGTTCAATCACGAATCGGG 59.349 55.000 7.80 1.97 44.02 5.14
39 40 0.650512 CCCGGTTCAATCACGAATCG 59.349 55.000 0.00 0.00 46.62 3.34
40 41 1.664151 GTCCCGGTTCAATCACGAATC 59.336 52.381 0.00 0.00 0.00 2.52
41 42 1.278127 AGTCCCGGTTCAATCACGAAT 59.722 47.619 0.00 0.00 0.00 3.34
42 43 0.682852 AGTCCCGGTTCAATCACGAA 59.317 50.000 0.00 0.00 0.00 3.85
43 44 1.548081 TAGTCCCGGTTCAATCACGA 58.452 50.000 0.00 0.00 0.00 4.35
44 45 2.373540 TTAGTCCCGGTTCAATCACG 57.626 50.000 0.00 0.00 0.00 4.35
45 46 3.374058 CACATTAGTCCCGGTTCAATCAC 59.626 47.826 0.00 0.00 0.00 3.06
46 47 3.605634 CACATTAGTCCCGGTTCAATCA 58.394 45.455 0.00 0.00 0.00 2.57
47 48 2.943033 CCACATTAGTCCCGGTTCAATC 59.057 50.000 0.00 0.00 0.00 2.67
48 49 2.574369 TCCACATTAGTCCCGGTTCAAT 59.426 45.455 0.00 0.00 0.00 2.57
49 50 1.979308 TCCACATTAGTCCCGGTTCAA 59.021 47.619 0.00 0.00 0.00 2.69
50 51 1.646912 TCCACATTAGTCCCGGTTCA 58.353 50.000 0.00 0.00 0.00 3.18
51 52 4.618920 ATATCCACATTAGTCCCGGTTC 57.381 45.455 0.00 0.00 0.00 3.62
52 53 4.714632 CAATATCCACATTAGTCCCGGTT 58.285 43.478 0.00 0.00 0.00 4.44
53 54 3.496160 GCAATATCCACATTAGTCCCGGT 60.496 47.826 0.00 0.00 0.00 5.28
54 55 3.074412 GCAATATCCACATTAGTCCCGG 58.926 50.000 0.00 0.00 0.00 5.73
55 56 3.074412 GGCAATATCCACATTAGTCCCG 58.926 50.000 0.00 0.00 0.00 5.14
56 57 3.074538 AGGGCAATATCCACATTAGTCCC 59.925 47.826 0.00 0.00 0.00 4.46
57 58 4.373156 AGGGCAATATCCACATTAGTCC 57.627 45.455 0.00 0.00 0.00 3.85
58 59 6.595716 GTCATAGGGCAATATCCACATTAGTC 59.404 42.308 0.00 0.00 0.00 2.59
59 60 6.476378 GTCATAGGGCAATATCCACATTAGT 58.524 40.000 0.00 0.00 0.00 2.24
60 61 5.882557 GGTCATAGGGCAATATCCACATTAG 59.117 44.000 0.00 0.00 0.00 1.73
61 62 5.311913 TGGTCATAGGGCAATATCCACATTA 59.688 40.000 0.00 0.00 0.00 1.90
62 63 4.106179 TGGTCATAGGGCAATATCCACATT 59.894 41.667 0.00 0.00 0.00 2.71
63 64 3.657239 TGGTCATAGGGCAATATCCACAT 59.343 43.478 0.00 0.00 0.00 3.21
64 65 3.052329 TGGTCATAGGGCAATATCCACA 58.948 45.455 0.00 0.00 0.00 4.17
65 66 3.788227 TGGTCATAGGGCAATATCCAC 57.212 47.619 0.00 0.00 0.00 4.02
66 67 4.728772 CTTTGGTCATAGGGCAATATCCA 58.271 43.478 0.00 0.00 0.00 3.41
67 68 3.507622 GCTTTGGTCATAGGGCAATATCC 59.492 47.826 0.00 0.00 0.00 2.59
68 69 3.507622 GGCTTTGGTCATAGGGCAATATC 59.492 47.826 0.00 0.00 0.00 1.63
69 70 3.500343 GGCTTTGGTCATAGGGCAATAT 58.500 45.455 0.00 0.00 0.00 1.28
70 71 2.424234 GGGCTTTGGTCATAGGGCAATA 60.424 50.000 0.00 0.00 0.00 1.90
71 72 1.689258 GGGCTTTGGTCATAGGGCAAT 60.689 52.381 0.00 0.00 0.00 3.56
72 73 0.324275 GGGCTTTGGTCATAGGGCAA 60.324 55.000 0.00 0.00 0.00 4.52
73 74 1.306296 GGGCTTTGGTCATAGGGCA 59.694 57.895 0.00 0.00 0.00 5.36
74 75 0.753111 CTGGGCTTTGGTCATAGGGC 60.753 60.000 0.00 0.00 0.00 5.19
75 76 0.625849 ACTGGGCTTTGGTCATAGGG 59.374 55.000 0.00 0.00 0.00 3.53
76 77 2.514458 AACTGGGCTTTGGTCATAGG 57.486 50.000 0.00 0.00 0.00 2.57
77 78 4.082125 AGAAAACTGGGCTTTGGTCATAG 58.918 43.478 0.00 0.00 0.00 2.23
78 79 4.112634 AGAAAACTGGGCTTTGGTCATA 57.887 40.909 0.00 0.00 0.00 2.15
79 80 2.962859 AGAAAACTGGGCTTTGGTCAT 58.037 42.857 0.00 0.00 0.00 3.06
80 81 2.452600 AGAAAACTGGGCTTTGGTCA 57.547 45.000 0.00 0.00 0.00 4.02
81 82 3.487372 AGTAGAAAACTGGGCTTTGGTC 58.513 45.455 0.00 0.00 36.93 4.02
82 83 3.595190 AGTAGAAAACTGGGCTTTGGT 57.405 42.857 0.00 0.00 36.93 3.67
83 84 4.455877 CACTAGTAGAAAACTGGGCTTTGG 59.544 45.833 3.59 0.00 40.86 3.28
84 85 4.083271 GCACTAGTAGAAAACTGGGCTTTG 60.083 45.833 3.59 0.00 40.86 2.77
85 86 4.072839 GCACTAGTAGAAAACTGGGCTTT 58.927 43.478 3.59 0.00 40.86 3.51
86 87 3.328050 AGCACTAGTAGAAAACTGGGCTT 59.672 43.478 3.59 0.00 40.72 4.35
87 88 2.907042 AGCACTAGTAGAAAACTGGGCT 59.093 45.455 3.59 0.00 40.86 5.19
88 89 3.336138 AGCACTAGTAGAAAACTGGGC 57.664 47.619 3.59 0.00 40.86 5.36
89 90 5.790593 TGTTAGCACTAGTAGAAAACTGGG 58.209 41.667 3.59 0.00 40.86 4.45
90 91 9.035607 CATATGTTAGCACTAGTAGAAAACTGG 57.964 37.037 3.59 0.00 42.21 4.00
91 92 9.803315 TCATATGTTAGCACTAGTAGAAAACTG 57.197 33.333 3.59 0.00 39.39 3.16
224 226 8.081517 TGCTTCAAATCCCTCATATTTTTGAT 57.918 30.769 0.00 0.00 36.50 2.57
524 534 0.040794 AGCCTGTCTAACCCTACCGT 59.959 55.000 0.00 0.00 0.00 4.83
608 618 2.254508 GGCGGTAGGGTAGTAATCCAT 58.745 52.381 0.00 0.00 0.00 3.41
647 657 0.899720 CTGGCGGTAGGGTTAGACAA 59.100 55.000 0.00 0.00 0.00 3.18
676 686 7.237982 TCAGGATTTGACCTTTTTCCTTATCA 58.762 34.615 0.00 0.00 38.32 2.15
712 722 6.739331 AATTCAGGATCTGACCCTAGTTAG 57.261 41.667 0.00 0.00 40.46 2.34
713 723 8.798975 ATAAATTCAGGATCTGACCCTAGTTA 57.201 34.615 0.00 0.00 40.46 2.24
757 768 0.036306 AAGGAGGCCGAATTTCGTGT 59.964 50.000 16.89 1.69 38.40 4.49
773 784 1.758906 GGACGGGAGAGGGAGAAGG 60.759 68.421 0.00 0.00 0.00 3.46
774 785 1.758906 GGGACGGGAGAGGGAGAAG 60.759 68.421 0.00 0.00 0.00 2.85
775 786 2.363361 GGGACGGGAGAGGGAGAA 59.637 66.667 0.00 0.00 0.00 2.87
823 834 3.634397 TTGACAGGGGAAGAATAGCAG 57.366 47.619 0.00 0.00 0.00 4.24
839 853 0.370273 CGCGCTGTGGAGTATTTGAC 59.630 55.000 5.56 0.00 0.00 3.18
896 920 2.441348 TGGCGACTGGCGAGGATA 60.441 61.111 7.31 0.00 44.92 2.59
897 921 4.148825 GTGGCGACTGGCGAGGAT 62.149 66.667 7.31 0.00 44.92 3.24
903 927 4.927782 TGTGTGGTGGCGACTGGC 62.928 66.667 0.00 0.00 42.51 4.85
904 928 2.203139 TTGTGTGGTGGCGACTGG 60.203 61.111 0.00 0.00 0.00 4.00
905 929 2.253758 CCTTGTGTGGTGGCGACTG 61.254 63.158 0.00 0.00 0.00 3.51
906 930 1.978455 TTCCTTGTGTGGTGGCGACT 61.978 55.000 0.00 0.00 0.00 4.18
907 931 1.507141 CTTCCTTGTGTGGTGGCGAC 61.507 60.000 0.00 0.00 0.00 5.19
923 947 2.003196 CCTCGCTCTTTCCTCACTTC 57.997 55.000 0.00 0.00 0.00 3.01
924 948 0.036858 GCCTCGCTCTTTCCTCACTT 60.037 55.000 0.00 0.00 0.00 3.16
987 1017 1.421485 CTTCATGCTCAACGCGGTC 59.579 57.895 12.47 0.00 43.27 4.79
1410 1526 4.334552 TGTTACATGACGGACAGTAGGTA 58.665 43.478 0.00 0.00 0.00 3.08
1500 1634 4.424711 TTCCCGCTCATGCCCACC 62.425 66.667 0.00 0.00 35.36 4.61
1501 1635 2.825836 CTTCCCGCTCATGCCCAC 60.826 66.667 0.00 0.00 35.36 4.61
1502 1636 4.113815 CCTTCCCGCTCATGCCCA 62.114 66.667 0.00 0.00 35.36 5.36
1503 1637 4.883354 CCCTTCCCGCTCATGCCC 62.883 72.222 0.00 0.00 35.36 5.36
1507 1641 2.998949 GAACCCCTTCCCGCTCAT 59.001 61.111 0.00 0.00 0.00 2.90
1526 1660 3.693382 TACGTCACGATGCCCTGCG 62.693 63.158 2.91 0.00 0.00 5.18
1654 1788 1.381191 TGGTCATAGCCGAGCTGGA 60.381 57.895 8.44 3.98 40.10 3.86
1655 1789 1.068753 CTGGTCATAGCCGAGCTGG 59.931 63.158 8.44 0.00 40.10 4.85
1716 1850 9.860650 AGAGAGAGAAACATGTACTACTATGAT 57.139 33.333 0.00 0.00 0.00 2.45
1717 1851 9.688091 AAGAGAGAGAAACATGTACTACTATGA 57.312 33.333 0.00 0.00 0.00 2.15
1718 1852 9.944663 GAAGAGAGAGAAACATGTACTACTATG 57.055 37.037 0.00 0.00 0.00 2.23
1719 1853 9.127277 GGAAGAGAGAGAAACATGTACTACTAT 57.873 37.037 0.00 0.80 0.00 2.12
1720 1854 8.107729 TGGAAGAGAGAGAAACATGTACTACTA 58.892 37.037 0.00 0.00 0.00 1.82
1721 1855 6.948886 TGGAAGAGAGAGAAACATGTACTACT 59.051 38.462 0.00 5.49 0.00 2.57
1722 1856 7.159322 TGGAAGAGAGAGAAACATGTACTAC 57.841 40.000 0.00 0.90 0.00 2.73
1723 1857 7.962995 ATGGAAGAGAGAGAAACATGTACTA 57.037 36.000 0.00 0.00 0.00 1.82
1724 1858 6.865834 ATGGAAGAGAGAGAAACATGTACT 57.134 37.500 0.00 1.46 0.00 2.73
1725 1859 6.254589 CGAATGGAAGAGAGAGAAACATGTAC 59.745 42.308 0.00 0.00 0.00 2.90
1726 1860 6.152831 TCGAATGGAAGAGAGAGAAACATGTA 59.847 38.462 0.00 0.00 0.00 2.29
1727 1861 5.047021 TCGAATGGAAGAGAGAGAAACATGT 60.047 40.000 0.00 0.00 0.00 3.21
1728 1862 5.414360 TCGAATGGAAGAGAGAGAAACATG 58.586 41.667 0.00 0.00 0.00 3.21
1729 1863 5.667539 TCGAATGGAAGAGAGAGAAACAT 57.332 39.130 0.00 0.00 0.00 2.71
1730 1864 5.667539 ATCGAATGGAAGAGAGAGAAACA 57.332 39.130 0.00 0.00 0.00 2.83
1757 1891 6.389091 TGATTGATGCACATGGTTAAGAAAC 58.611 36.000 0.00 0.00 34.66 2.78
1791 1938 0.165944 GAGGAAATGCAACGTGACGG 59.834 55.000 10.66 0.00 0.00 4.79
1834 1981 3.921767 CTGCAGCGACGCCTTCAGA 62.922 63.158 17.79 0.00 0.00 3.27
1935 2084 2.286654 GCATCGAGCTACTTTTCCATGC 60.287 50.000 0.00 0.00 41.15 4.06
1957 2106 7.148641 ACTTAACATTAGCTACATGGATCGAG 58.851 38.462 15.67 10.29 0.00 4.04
1971 2120 5.848833 ACGGAGGGAGTACTTAACATTAG 57.151 43.478 0.00 0.00 0.00 1.73
1972 2121 6.211184 TGAAACGGAGGGAGTACTTAACATTA 59.789 38.462 0.00 0.00 0.00 1.90
1973 2122 5.012354 TGAAACGGAGGGAGTACTTAACATT 59.988 40.000 0.00 0.00 0.00 2.71
1974 2123 4.529377 TGAAACGGAGGGAGTACTTAACAT 59.471 41.667 0.00 0.00 0.00 2.71
1975 2124 3.896888 TGAAACGGAGGGAGTACTTAACA 59.103 43.478 0.00 0.00 0.00 2.41
1976 2125 4.525912 TGAAACGGAGGGAGTACTTAAC 57.474 45.455 0.00 0.00 0.00 2.01
1978 2127 5.750352 ATTTGAAACGGAGGGAGTACTTA 57.250 39.130 0.00 0.00 0.00 2.24
1979 2128 4.635699 ATTTGAAACGGAGGGAGTACTT 57.364 40.909 0.00 0.00 0.00 2.24
1980 2129 4.635699 AATTTGAAACGGAGGGAGTACT 57.364 40.909 0.00 0.00 0.00 2.73
1981 2130 5.485620 AGTAATTTGAAACGGAGGGAGTAC 58.514 41.667 0.00 0.00 0.00 2.73
1982 2131 5.622914 CGAGTAATTTGAAACGGAGGGAGTA 60.623 44.000 0.00 0.00 0.00 2.59
1983 2132 4.576879 GAGTAATTTGAAACGGAGGGAGT 58.423 43.478 0.00 0.00 0.00 3.85
1984 2133 3.617263 CGAGTAATTTGAAACGGAGGGAG 59.383 47.826 0.00 0.00 0.00 4.30
1985 2134 3.007182 ACGAGTAATTTGAAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
1986 2135 3.332034 ACGAGTAATTTGAAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
1987 2136 4.708601 CAACGAGTAATTTGAAACGGAGG 58.291 43.478 0.00 0.00 0.00 4.30
1988 2137 4.148891 GCAACGAGTAATTTGAAACGGAG 58.851 43.478 0.00 0.00 0.00 4.63
1989 2138 3.560481 TGCAACGAGTAATTTGAAACGGA 59.440 39.130 0.00 0.00 0.00 4.69
1990 2139 3.662186 GTGCAACGAGTAATTTGAAACGG 59.338 43.478 0.00 0.00 0.00 4.44
1991 2140 4.275662 TGTGCAACGAGTAATTTGAAACG 58.724 39.130 0.00 0.00 42.39 3.60
1992 2141 6.561945 TTTGTGCAACGAGTAATTTGAAAC 57.438 33.333 0.00 0.00 42.39 2.78
1993 2142 6.199908 CCATTTGTGCAACGAGTAATTTGAAA 59.800 34.615 0.00 0.00 42.39 2.69
1994 2143 5.689514 CCATTTGTGCAACGAGTAATTTGAA 59.310 36.000 0.00 0.00 42.39 2.69
1995 2144 5.009110 TCCATTTGTGCAACGAGTAATTTGA 59.991 36.000 0.00 0.00 42.39 2.69
1996 2145 5.116983 GTCCATTTGTGCAACGAGTAATTTG 59.883 40.000 0.00 0.00 42.39 2.32
1997 2146 5.219633 GTCCATTTGTGCAACGAGTAATTT 58.780 37.500 0.00 0.00 42.39 1.82
1998 2147 4.612712 CGTCCATTTGTGCAACGAGTAATT 60.613 41.667 0.00 0.00 42.39 1.40
1999 2148 3.120338 CGTCCATTTGTGCAACGAGTAAT 60.120 43.478 0.00 0.00 42.39 1.89
2000 2149 2.222213 CGTCCATTTGTGCAACGAGTAA 59.778 45.455 0.00 0.00 42.39 2.24
2001 2150 1.795872 CGTCCATTTGTGCAACGAGTA 59.204 47.619 0.00 0.00 42.39 2.59
2002 2151 0.586319 CGTCCATTTGTGCAACGAGT 59.414 50.000 0.00 0.00 42.39 4.18
2003 2152 0.586319 ACGTCCATTTGTGCAACGAG 59.414 50.000 11.45 0.00 42.39 4.18
2004 2153 1.867166 TACGTCCATTTGTGCAACGA 58.133 45.000 11.45 0.00 42.39 3.85
2005 2154 2.415168 AGATACGTCCATTTGTGCAACG 59.585 45.455 0.00 3.44 42.39 4.10
2006 2155 4.868171 TCTAGATACGTCCATTTGTGCAAC 59.132 41.667 0.00 0.00 37.35 4.17
2007 2156 5.079689 TCTAGATACGTCCATTTGTGCAA 57.920 39.130 0.00 0.00 0.00 4.08
2008 2157 4.729227 TCTAGATACGTCCATTTGTGCA 57.271 40.909 0.00 0.00 0.00 4.57
2009 2158 5.109903 AGTTCTAGATACGTCCATTTGTGC 58.890 41.667 0.00 0.00 0.00 4.57
2010 2159 8.697846 TTTAGTTCTAGATACGTCCATTTGTG 57.302 34.615 0.00 0.00 0.00 3.33
2011 2160 9.886132 ATTTTAGTTCTAGATACGTCCATTTGT 57.114 29.630 0.00 0.00 0.00 2.83
2035 2184 8.237949 GCACGTGTAGATGTATCTAGATGTATT 58.762 37.037 18.38 0.00 45.54 1.89
2036 2185 7.413109 CGCACGTGTAGATGTATCTAGATGTAT 60.413 40.741 18.38 9.11 45.54 2.29
2037 2186 6.128634 CGCACGTGTAGATGTATCTAGATGTA 60.129 42.308 18.38 4.44 45.54 2.29
2039 2188 5.082723 CGCACGTGTAGATGTATCTAGATG 58.917 45.833 18.38 13.65 42.31 2.90
2040 2189 4.995487 TCGCACGTGTAGATGTATCTAGAT 59.005 41.667 18.38 10.73 39.87 1.98
2041 2190 4.210746 GTCGCACGTGTAGATGTATCTAGA 59.789 45.833 18.38 0.00 39.87 2.43
2042 2191 4.025145 TGTCGCACGTGTAGATGTATCTAG 60.025 45.833 18.38 0.00 39.87 2.43
2043 2192 3.872771 TGTCGCACGTGTAGATGTATCTA 59.127 43.478 18.38 0.00 38.32 1.98
2044 2193 2.681344 TGTCGCACGTGTAGATGTATCT 59.319 45.455 18.38 0.00 40.86 1.98
2045 2194 3.060978 TGTCGCACGTGTAGATGTATC 57.939 47.619 18.38 5.74 0.00 2.24
2046 2195 3.119602 ACTTGTCGCACGTGTAGATGTAT 60.120 43.478 18.38 2.94 0.00 2.29
2047 2196 2.227149 ACTTGTCGCACGTGTAGATGTA 59.773 45.455 18.38 5.71 0.00 2.29
2048 2197 1.000607 ACTTGTCGCACGTGTAGATGT 60.001 47.619 18.38 13.33 0.00 3.06
2049 2198 1.698165 ACTTGTCGCACGTGTAGATG 58.302 50.000 18.38 12.79 0.00 2.90
2050 2199 3.564235 TTACTTGTCGCACGTGTAGAT 57.436 42.857 18.38 5.03 0.00 1.98
2051 2200 3.564235 ATTACTTGTCGCACGTGTAGA 57.436 42.857 18.38 14.17 0.00 2.59
2052 2201 3.060363 GGAATTACTTGTCGCACGTGTAG 59.940 47.826 18.38 11.94 0.00 2.74
2053 2202 2.988493 GGAATTACTTGTCGCACGTGTA 59.012 45.455 18.38 2.72 0.00 2.90
2054 2203 1.796459 GGAATTACTTGTCGCACGTGT 59.204 47.619 18.38 0.00 0.00 4.49
2055 2204 1.795872 TGGAATTACTTGTCGCACGTG 59.204 47.619 12.28 12.28 0.00 4.49
2056 2205 2.157834 TGGAATTACTTGTCGCACGT 57.842 45.000 0.00 0.00 0.00 4.49
2057 2206 3.529634 TTTGGAATTACTTGTCGCACG 57.470 42.857 0.00 0.00 0.00 5.34
2058 2207 6.608610 AGTAATTTGGAATTACTTGTCGCAC 58.391 36.000 16.38 0.00 40.72 5.34
2059 2208 6.401688 CGAGTAATTTGGAATTACTTGTCGCA 60.402 38.462 20.75 0.00 42.82 5.10
2060 2209 5.957796 CGAGTAATTTGGAATTACTTGTCGC 59.042 40.000 20.75 10.99 42.82 5.19
2064 2213 7.744715 GTGTGACGAGTAATTTGGAATTACTTG 59.255 37.037 25.28 25.28 45.15 3.16
2065 2214 7.442969 TGTGTGACGAGTAATTTGGAATTACTT 59.557 33.333 20.75 10.73 42.82 2.24
2066 2215 6.932400 TGTGTGACGAGTAATTTGGAATTACT 59.068 34.615 20.21 20.21 44.72 2.24
2067 2216 7.124347 TGTGTGACGAGTAATTTGGAATTAC 57.876 36.000 13.13 13.13 35.36 1.89
2068 2217 7.731882 TTGTGTGACGAGTAATTTGGAATTA 57.268 32.000 0.00 0.00 0.00 1.40
2069 2218 6.627395 TTGTGTGACGAGTAATTTGGAATT 57.373 33.333 0.00 0.00 0.00 2.17
2070 2219 6.627395 TTTGTGTGACGAGTAATTTGGAAT 57.373 33.333 0.00 0.00 0.00 3.01
2071 2220 6.434596 CATTTGTGTGACGAGTAATTTGGAA 58.565 36.000 0.00 0.00 0.00 3.53
2072 2221 5.049060 CCATTTGTGTGACGAGTAATTTGGA 60.049 40.000 0.00 0.00 0.00 3.53
2073 2222 5.049060 TCCATTTGTGTGACGAGTAATTTGG 60.049 40.000 0.00 0.00 0.00 3.28
2074 2223 5.996219 TCCATTTGTGTGACGAGTAATTTG 58.004 37.500 0.00 0.00 0.00 2.32
2075 2224 6.206634 ACATCCATTTGTGTGACGAGTAATTT 59.793 34.615 0.00 0.00 0.00 1.82
2076 2225 5.705441 ACATCCATTTGTGTGACGAGTAATT 59.295 36.000 0.00 0.00 0.00 1.40
2077 2226 5.245531 ACATCCATTTGTGTGACGAGTAAT 58.754 37.500 0.00 0.00 0.00 1.89
2078 2227 4.637276 ACATCCATTTGTGTGACGAGTAA 58.363 39.130 0.00 0.00 0.00 2.24
2079 2228 4.265904 ACATCCATTTGTGTGACGAGTA 57.734 40.909 0.00 0.00 0.00 2.59
2080 2229 3.126001 ACATCCATTTGTGTGACGAGT 57.874 42.857 0.00 0.00 0.00 4.18
2081 2230 5.111989 AGATACATCCATTTGTGTGACGAG 58.888 41.667 0.00 0.00 0.00 4.18
2082 2231 5.084818 AGATACATCCATTTGTGTGACGA 57.915 39.130 0.00 0.00 0.00 4.20
2083 2232 6.273071 TCTAGATACATCCATTTGTGTGACG 58.727 40.000 0.00 0.00 0.00 4.35
2084 2233 7.766278 AGTTCTAGATACATCCATTTGTGTGAC 59.234 37.037 0.00 0.00 0.00 3.67
2085 2234 7.851228 AGTTCTAGATACATCCATTTGTGTGA 58.149 34.615 0.00 0.00 0.00 3.58
2086 2235 9.599866 TTAGTTCTAGATACATCCATTTGTGTG 57.400 33.333 0.00 0.00 0.00 3.82
2112 2261 8.744652 GCAGGTGTAGATGTATCTAGATGTATT 58.255 37.037 15.79 0.00 39.87 1.89
2113 2262 7.066404 CGCAGGTGTAGATGTATCTAGATGTAT 59.934 40.741 15.79 9.11 39.87 2.29
2114 2263 6.371825 CGCAGGTGTAGATGTATCTAGATGTA 59.628 42.308 15.79 4.44 39.87 2.29
2115 2264 5.182190 CGCAGGTGTAGATGTATCTAGATGT 59.818 44.000 15.79 1.25 39.87 3.06
2116 2265 5.412904 TCGCAGGTGTAGATGTATCTAGATG 59.587 44.000 15.79 0.00 39.87 2.90
2117 2266 5.413213 GTCGCAGGTGTAGATGTATCTAGAT 59.587 44.000 10.73 10.73 39.87 1.98
2118 2267 4.755629 GTCGCAGGTGTAGATGTATCTAGA 59.244 45.833 0.00 0.00 39.87 2.43
2119 2268 4.515567 TGTCGCAGGTGTAGATGTATCTAG 59.484 45.833 1.93 0.00 39.87 2.43
2120 2269 4.457466 TGTCGCAGGTGTAGATGTATCTA 58.543 43.478 0.00 0.00 38.32 1.98
2121 2270 3.288092 TGTCGCAGGTGTAGATGTATCT 58.712 45.455 0.00 0.00 40.86 1.98
2122 2271 3.710326 TGTCGCAGGTGTAGATGTATC 57.290 47.619 0.00 0.00 0.00 2.24
2123 2272 3.447586 ACTTGTCGCAGGTGTAGATGTAT 59.552 43.478 0.00 0.00 0.00 2.29
2124 2273 2.823747 ACTTGTCGCAGGTGTAGATGTA 59.176 45.455 0.00 0.00 0.00 2.29
2125 2274 1.618837 ACTTGTCGCAGGTGTAGATGT 59.381 47.619 0.00 0.00 0.00 3.06
2126 2275 2.370281 ACTTGTCGCAGGTGTAGATG 57.630 50.000 0.00 0.00 0.00 2.90
2127 2276 4.737855 ATTACTTGTCGCAGGTGTAGAT 57.262 40.909 5.18 0.00 0.00 1.98
2128 2277 4.491676 GAATTACTTGTCGCAGGTGTAGA 58.508 43.478 5.18 0.00 0.00 2.59
2129 2278 3.303495 CGAATTACTTGTCGCAGGTGTAG 59.697 47.826 5.18 0.00 0.00 2.74
2130 2279 3.247442 CGAATTACTTGTCGCAGGTGTA 58.753 45.455 5.18 0.00 0.00 2.90
2131 2280 2.066262 CGAATTACTTGTCGCAGGTGT 58.934 47.619 5.18 0.00 0.00 4.16
2132 2281 1.393539 CCGAATTACTTGTCGCAGGTG 59.606 52.381 5.18 0.00 35.93 4.00
2133 2282 1.274167 TCCGAATTACTTGTCGCAGGT 59.726 47.619 0.00 0.91 35.93 4.00
2134 2283 2.004583 TCCGAATTACTTGTCGCAGG 57.995 50.000 0.00 0.00 35.93 4.85
2135 2284 2.222508 CGTTCCGAATTACTTGTCGCAG 60.223 50.000 0.00 0.00 35.93 5.18
2136 2285 1.722464 CGTTCCGAATTACTTGTCGCA 59.278 47.619 0.00 0.00 35.93 5.10
2137 2286 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
2138 2287 2.597305 CTCCGTTCCGAATTACTTGTCG 59.403 50.000 0.00 0.00 37.01 4.35
2139 2288 2.347755 GCTCCGTTCCGAATTACTTGTC 59.652 50.000 0.00 0.00 0.00 3.18
2140 2289 2.344025 GCTCCGTTCCGAATTACTTGT 58.656 47.619 0.00 0.00 0.00 3.16
2141 2290 1.323534 CGCTCCGTTCCGAATTACTTG 59.676 52.381 0.00 0.00 0.00 3.16
2142 2291 1.203052 TCGCTCCGTTCCGAATTACTT 59.797 47.619 0.00 0.00 0.00 2.24
2143 2292 0.813184 TCGCTCCGTTCCGAATTACT 59.187 50.000 0.00 0.00 0.00 2.24
2144 2293 1.197910 CTCGCTCCGTTCCGAATTAC 58.802 55.000 0.00 0.00 32.56 1.89
2145 2294 0.813184 ACTCGCTCCGTTCCGAATTA 59.187 50.000 0.00 0.00 32.56 1.40
2146 2295 0.813184 TACTCGCTCCGTTCCGAATT 59.187 50.000 0.00 0.00 32.56 2.17
2147 2296 0.381089 CTACTCGCTCCGTTCCGAAT 59.619 55.000 0.00 0.00 32.56 3.34
2148 2297 1.651240 CCTACTCGCTCCGTTCCGAA 61.651 60.000 0.00 0.00 32.56 4.30
2149 2298 2.110967 CCTACTCGCTCCGTTCCGA 61.111 63.158 0.00 0.00 0.00 4.55
2150 2299 1.930908 AACCTACTCGCTCCGTTCCG 61.931 60.000 0.00 0.00 0.00 4.30
2151 2300 0.458025 CAACCTACTCGCTCCGTTCC 60.458 60.000 0.00 0.00 0.00 3.62
2152 2301 0.458025 CCAACCTACTCGCTCCGTTC 60.458 60.000 0.00 0.00 0.00 3.95
2153 2302 1.590147 CCAACCTACTCGCTCCGTT 59.410 57.895 0.00 0.00 0.00 4.44
2154 2303 3.003113 GCCAACCTACTCGCTCCGT 62.003 63.158 0.00 0.00 0.00 4.69
2155 2304 2.202756 GCCAACCTACTCGCTCCG 60.203 66.667 0.00 0.00 0.00 4.63
2156 2305 1.153549 CAGCCAACCTACTCGCTCC 60.154 63.158 0.00 0.00 0.00 4.70
2157 2306 1.153549 CCAGCCAACCTACTCGCTC 60.154 63.158 0.00 0.00 0.00 5.03
2158 2307 1.889530 GACCAGCCAACCTACTCGCT 61.890 60.000 0.00 0.00 0.00 4.93
2159 2308 1.448013 GACCAGCCAACCTACTCGC 60.448 63.158 0.00 0.00 0.00 5.03
2160 2309 1.218316 GGACCAGCCAACCTACTCG 59.782 63.158 0.00 0.00 36.34 4.18
2161 2310 0.984995 AAGGACCAGCCAACCTACTC 59.015 55.000 0.00 0.00 40.02 2.59
2162 2311 1.446016 AAAGGACCAGCCAACCTACT 58.554 50.000 0.00 0.00 40.02 2.57
2163 2312 1.886542 CAAAAGGACCAGCCAACCTAC 59.113 52.381 0.00 0.00 40.02 3.18
2164 2313 1.821666 GCAAAAGGACCAGCCAACCTA 60.822 52.381 0.00 0.00 40.02 3.08
2165 2314 1.115326 GCAAAAGGACCAGCCAACCT 61.115 55.000 0.00 0.00 40.02 3.50
2166 2315 1.367471 GCAAAAGGACCAGCCAACC 59.633 57.895 0.00 0.00 40.02 3.77
2167 2316 0.681175 ATGCAAAAGGACCAGCCAAC 59.319 50.000 0.00 0.00 40.02 3.77
2168 2317 0.680618 CATGCAAAAGGACCAGCCAA 59.319 50.000 0.00 0.00 40.02 4.52
2169 2318 0.178967 TCATGCAAAAGGACCAGCCA 60.179 50.000 0.00 0.00 40.02 4.75
2170 2319 0.968405 TTCATGCAAAAGGACCAGCC 59.032 50.000 0.00 0.00 0.00 4.85
2171 2320 1.340889 TGTTCATGCAAAAGGACCAGC 59.659 47.619 0.00 0.00 0.00 4.85
2172 2321 3.006110 ACATGTTCATGCAAAAGGACCAG 59.994 43.478 12.00 0.00 0.00 4.00
2173 2322 2.964464 ACATGTTCATGCAAAAGGACCA 59.036 40.909 12.00 0.00 0.00 4.02
2174 2323 3.319755 CACATGTTCATGCAAAAGGACC 58.680 45.455 12.00 0.00 0.00 4.46
2175 2324 2.733026 GCACATGTTCATGCAAAAGGAC 59.267 45.455 12.00 0.00 41.65 3.85
2176 2325 3.029320 GCACATGTTCATGCAAAAGGA 57.971 42.857 12.00 0.00 41.65 3.36
2183 2332 1.458064 GCAGTTTGCACATGTTCATGC 59.542 47.619 12.00 6.77 44.26 4.06
2195 2344 3.498397 TGCTACTAGTCTTTGCAGTTTGC 59.502 43.478 0.00 0.00 45.29 3.68
2196 2345 4.083802 GGTGCTACTAGTCTTTGCAGTTTG 60.084 45.833 0.00 0.00 34.15 2.93
2197 2346 4.065789 GGTGCTACTAGTCTTTGCAGTTT 58.934 43.478 0.00 0.00 34.15 2.66
2198 2347 3.071023 TGGTGCTACTAGTCTTTGCAGTT 59.929 43.478 0.00 0.00 34.15 3.16
2199 2348 2.632996 TGGTGCTACTAGTCTTTGCAGT 59.367 45.455 0.00 0.00 34.15 4.40
2200 2349 3.319137 TGGTGCTACTAGTCTTTGCAG 57.681 47.619 0.00 0.00 34.15 4.41
2201 2350 3.369471 GGATGGTGCTACTAGTCTTTGCA 60.369 47.826 0.00 3.63 0.00 4.08
2202 2351 3.198872 GGATGGTGCTACTAGTCTTTGC 58.801 50.000 0.00 0.75 0.00 3.68
2203 2352 4.471904 TGGATGGTGCTACTAGTCTTTG 57.528 45.455 0.00 0.00 0.00 2.77
2204 2353 5.700402 ATTGGATGGTGCTACTAGTCTTT 57.300 39.130 0.00 0.00 0.00 2.52
2205 2354 5.700402 AATTGGATGGTGCTACTAGTCTT 57.300 39.130 0.00 0.00 0.00 3.01
2206 2355 5.305644 CCTAATTGGATGGTGCTACTAGTCT 59.694 44.000 0.00 0.00 38.35 3.24
2207 2356 5.070580 ACCTAATTGGATGGTGCTACTAGTC 59.929 44.000 0.00 0.00 39.71 2.59
2208 2357 4.969359 ACCTAATTGGATGGTGCTACTAGT 59.031 41.667 0.00 0.00 39.71 2.57
2209 2358 5.300752 CACCTAATTGGATGGTGCTACTAG 58.699 45.833 0.00 0.00 43.61 2.57
2210 2359 5.290493 CACCTAATTGGATGGTGCTACTA 57.710 43.478 0.00 0.00 43.61 1.82
2211 2360 4.156455 CACCTAATTGGATGGTGCTACT 57.844 45.455 0.00 0.00 43.61 2.57
2217 2366 5.919348 AGATCATCACCTAATTGGATGGT 57.081 39.130 0.00 0.00 39.07 3.55
2218 2367 6.548622 ACAAAGATCATCACCTAATTGGATGG 59.451 38.462 0.00 0.00 39.07 3.51
2219 2368 7.067859 ACACAAAGATCATCACCTAATTGGATG 59.932 37.037 0.00 0.00 39.75 3.51
2220 2369 7.067859 CACACAAAGATCATCACCTAATTGGAT 59.932 37.037 0.00 0.00 39.71 3.41
2221 2370 6.375174 CACACAAAGATCATCACCTAATTGGA 59.625 38.462 0.00 0.00 39.71 3.53
2222 2371 6.375174 TCACACAAAGATCATCACCTAATTGG 59.625 38.462 0.00 0.00 42.93 3.16
2223 2372 7.381766 TCACACAAAGATCATCACCTAATTG 57.618 36.000 0.00 0.00 0.00 2.32
2224 2373 6.094603 GCTCACACAAAGATCATCACCTAATT 59.905 38.462 0.00 0.00 0.00 1.40
2225 2374 5.587844 GCTCACACAAAGATCATCACCTAAT 59.412 40.000 0.00 0.00 0.00 1.73
2226 2375 4.937620 GCTCACACAAAGATCATCACCTAA 59.062 41.667 0.00 0.00 0.00 2.69
2227 2376 4.020307 TGCTCACACAAAGATCATCACCTA 60.020 41.667 0.00 0.00 0.00 3.08
2228 2377 3.244665 TGCTCACACAAAGATCATCACCT 60.245 43.478 0.00 0.00 0.00 4.00
2229 2378 3.076621 TGCTCACACAAAGATCATCACC 58.923 45.455 0.00 0.00 0.00 4.02
2230 2379 4.393990 TGATGCTCACACAAAGATCATCAC 59.606 41.667 5.82 0.00 41.21 3.06
2231 2380 4.581868 TGATGCTCACACAAAGATCATCA 58.418 39.130 5.82 5.82 42.80 3.07
2232 2381 4.874396 TCTGATGCTCACACAAAGATCATC 59.126 41.667 0.00 0.00 38.47 2.92
2233 2382 4.840271 TCTGATGCTCACACAAAGATCAT 58.160 39.130 0.00 0.00 0.00 2.45
2234 2383 4.276058 TCTGATGCTCACACAAAGATCA 57.724 40.909 0.00 0.00 0.00 2.92
2235 2384 4.694509 AGTTCTGATGCTCACACAAAGATC 59.305 41.667 0.00 0.00 0.00 2.75
2236 2385 4.649692 AGTTCTGATGCTCACACAAAGAT 58.350 39.130 0.00 0.00 0.00 2.40
2237 2386 4.077300 AGTTCTGATGCTCACACAAAGA 57.923 40.909 0.00 0.00 0.00 2.52
2238 2387 5.873712 AGATAGTTCTGATGCTCACACAAAG 59.126 40.000 0.00 0.00 0.00 2.77
2247 2396 5.812642 CACCGTTTTAGATAGTTCTGATGCT 59.187 40.000 0.00 0.00 33.17 3.79
2248 2397 5.006746 CCACCGTTTTAGATAGTTCTGATGC 59.993 44.000 0.00 0.00 33.17 3.91
2321 2479 8.994170 GGAGTAACTGATTAATTAAGCTGGATC 58.006 37.037 20.08 13.01 0.00 3.36
2322 2480 8.494433 TGGAGTAACTGATTAATTAAGCTGGAT 58.506 33.333 20.08 12.87 0.00 3.41
2333 2491 7.549147 ACTACAACCTGGAGTAACTGATTAA 57.451 36.000 0.00 0.00 40.43 1.40
2335 2493 6.724905 ACTACTACAACCTGGAGTAACTGATT 59.275 38.462 0.00 0.00 42.79 2.57
2343 2501 4.043812 TGGAGTACTACTACAACCTGGAGT 59.956 45.833 6.66 0.79 45.18 3.85
2356 2514 5.107065 GCATCAACACAAAGTGGAGTACTAC 60.107 44.000 0.00 0.00 39.18 2.73
2364 2522 3.713858 TCAAGCATCAACACAAAGTGG 57.286 42.857 1.93 0.00 37.94 4.00
2365 2523 4.613944 ACATCAAGCATCAACACAAAGTG 58.386 39.130 0.00 0.00 39.75 3.16
2366 2524 4.924305 ACATCAAGCATCAACACAAAGT 57.076 36.364 0.00 0.00 0.00 2.66
2367 2525 5.803461 CCATACATCAAGCATCAACACAAAG 59.197 40.000 0.00 0.00 0.00 2.77
2368 2526 5.336610 CCCATACATCAAGCATCAACACAAA 60.337 40.000 0.00 0.00 0.00 2.83
2412 2570 6.564709 TTTGAGAACCAACAGAAGATGATG 57.435 37.500 0.00 0.00 33.85 3.07
2491 2650 1.448540 CAGTAGGCGCACAAGAGGG 60.449 63.158 10.83 0.00 0.00 4.30
2517 2676 2.740580 GCACCTGCCATGGATGATTTTG 60.741 50.000 18.40 3.37 34.31 2.44
2544 2703 3.141398 CATGACCTTCATATTCCCACCG 58.859 50.000 0.00 0.00 34.28 4.94
2545 2704 2.887152 GCATGACCTTCATATTCCCACC 59.113 50.000 0.00 0.00 34.28 4.61
2546 2705 3.554934 TGCATGACCTTCATATTCCCAC 58.445 45.455 0.00 0.00 34.28 4.61
2547 2706 3.949586 TGCATGACCTTCATATTCCCA 57.050 42.857 0.00 0.00 34.28 4.37
2548 2707 3.005155 GCTTGCATGACCTTCATATTCCC 59.995 47.826 3.33 0.00 34.28 3.97
2549 2708 3.304257 CGCTTGCATGACCTTCATATTCC 60.304 47.826 3.33 0.00 34.28 3.01
2550 2709 3.313526 ACGCTTGCATGACCTTCATATTC 59.686 43.478 3.33 0.00 34.28 1.75
2554 2713 1.200716 CAACGCTTGCATGACCTTCAT 59.799 47.619 3.33 0.00 37.65 2.57
2610 2769 1.054231 TGAGAGCTATGCTGGGATGG 58.946 55.000 0.00 0.00 39.88 3.51
2616 2804 2.429971 TGAGAAGGTGAGAGCTATGCTG 59.570 50.000 0.00 0.00 39.88 4.41
2627 2815 4.136796 CCTTGATTGTGTTGAGAAGGTGA 58.863 43.478 0.00 0.00 0.00 4.02
2628 2816 3.304928 GCCTTGATTGTGTTGAGAAGGTG 60.305 47.826 0.00 0.00 33.80 4.00
2669 2857 4.431131 CGGCCAGACCCCTTGCAT 62.431 66.667 2.24 0.00 33.10 3.96
2683 2871 4.838152 TGCCGGAATCAGAGCGGC 62.838 66.667 5.05 12.56 44.99 6.53
2705 2893 8.165239 AGTTGCTGATTTGATTTGTTACAGTA 57.835 30.769 0.00 0.00 0.00 2.74
2711 2899 5.117584 TGCAAGTTGCTGATTTGATTTGTT 58.882 33.333 27.17 0.00 45.31 2.83
2712 2900 4.695396 TGCAAGTTGCTGATTTGATTTGT 58.305 34.783 27.17 0.00 45.31 2.83
2713 2901 4.986034 TCTGCAAGTTGCTGATTTGATTTG 59.014 37.500 27.60 6.35 44.54 2.32
2714 2902 5.204409 TCTGCAAGTTGCTGATTTGATTT 57.796 34.783 27.60 0.00 44.54 2.17
2756 3240 6.126911 TGGATTTTTAACTTTGAAGCAAGGGT 60.127 34.615 0.00 0.00 0.00 4.34
2764 3248 9.936759 AGTGTTTTCTGGATTTTTAACTTTGAA 57.063 25.926 0.00 0.00 0.00 2.69
2769 3253 6.734871 GCCGAGTGTTTTCTGGATTTTTAACT 60.735 38.462 0.00 0.00 0.00 2.24
2770 3254 5.401376 GCCGAGTGTTTTCTGGATTTTTAAC 59.599 40.000 0.00 0.00 0.00 2.01
2773 3257 3.636764 AGCCGAGTGTTTTCTGGATTTTT 59.363 39.130 0.00 0.00 0.00 1.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.