Multiple sequence alignment - TraesCS3D01G009200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3D01G009200 chr3D 100.000 3322 0 0 1 3322 3090389 3087068 0.000000e+00 6135.0
1 TraesCS3D01G009200 chr3D 92.657 463 34 0 1839 2301 3041651 3041189 0.000000e+00 667.0
2 TraesCS3D01G009200 chr3D 92.405 158 12 0 1056 1213 3042770 3042613 3.330000e-55 226.0
3 TraesCS3D01G009200 chr3D 77.027 222 37 11 2926 3138 3055959 3055743 7.530000e-22 115.0
4 TraesCS3D01G009200 chr3B 86.921 971 99 14 1800 2759 2116127 2115174 0.000000e+00 1064.0
5 TraesCS3D01G009200 chr3B 83.384 987 91 35 1803 2760 2337239 2338181 0.000000e+00 846.0
6 TraesCS3D01G009200 chr3B 87.872 470 43 4 1843 2307 2102982 2102522 1.050000e-149 540.0
7 TraesCS3D01G009200 chr3B 86.585 410 45 5 1841 2240 2397302 2397711 8.460000e-121 444.0
8 TraesCS3D01G009200 chr3B 87.062 371 32 7 88 449 2119915 2119552 3.990000e-109 405.0
9 TraesCS3D01G009200 chr3B 86.313 358 30 6 88 433 2334155 2334505 4.050000e-99 372.0
10 TraesCS3D01G009200 chr3B 89.338 272 14 10 2780 3037 2341983 2342253 8.890000e-86 327.0
11 TraesCS3D01G009200 chr3B 80.986 426 38 29 818 1212 2116935 2116522 6.970000e-77 298.0
12 TraesCS3D01G009200 chr3B 76.492 553 54 41 723 1217 2335800 2336334 7.170000e-57 231.0
13 TraesCS3D01G009200 chr3B 75.836 538 83 24 1253 1784 2336447 2336943 2.580000e-56 230.0
14 TraesCS3D01G009200 chr3B 89.881 168 10 3 1062 1222 2104075 2103908 3.360000e-50 209.0
15 TraesCS3D01G009200 chr3B 80.342 234 23 12 999 1213 2396797 2397026 4.440000e-34 156.0
16 TraesCS3D01G009200 chr3B 75.075 333 56 17 1435 1752 2116461 2116141 2.690000e-26 130.0
17 TraesCS3D01G009200 chr3A 82.806 1169 122 28 1581 2690 178185 177037 0.000000e+00 972.0
18 TraesCS3D01G009200 chr3A 87.939 655 63 6 1840 2490 110259 109617 0.000000e+00 758.0
19 TraesCS3D01G009200 chr3A 86.875 480 36 13 1839 2301 96640 96171 2.290000e-141 512.0
20 TraesCS3D01G009200 chr3A 84.494 316 20 11 70 382 188300 188011 5.420000e-73 285.0
21 TraesCS3D01G009200 chr3A 92.391 184 10 2 1032 1212 178856 178674 3.290000e-65 259.0
22 TraesCS3D01G009200 chr3A 91.813 171 10 2 1045 1212 97610 97441 5.540000e-58 235.0
23 TraesCS3D01G009200 chr3A 80.769 104 5 6 1388 1488 178406 178315 2.140000e-07 67.6
24 TraesCS3D01G009200 chr3A 100.000 30 0 0 999 1028 97699 97670 4.630000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3D01G009200 chr3D 3087068 3090389 3321 True 6135.000000 6135 100.0000 1 3322 1 chr3D.!!$R2 3321
1 TraesCS3D01G009200 chr3D 3041189 3042770 1581 True 446.500000 667 92.5310 1056 2301 2 chr3D.!!$R3 1245
2 TraesCS3D01G009200 chr3B 2115174 2119915 4741 True 474.250000 1064 82.5110 88 2759 4 chr3B.!!$R2 2671
3 TraesCS3D01G009200 chr3B 2334155 2342253 8098 False 401.200000 846 82.2726 88 3037 5 chr3B.!!$F1 2949
4 TraesCS3D01G009200 chr3B 2102522 2104075 1553 True 374.500000 540 88.8765 1062 2307 2 chr3B.!!$R1 1245
5 TraesCS3D01G009200 chr3B 2396797 2397711 914 False 300.000000 444 83.4635 999 2240 2 chr3B.!!$F2 1241
6 TraesCS3D01G009200 chr3A 109617 110259 642 True 758.000000 758 87.9390 1840 2490 1 chr3A.!!$R1 650
7 TraesCS3D01G009200 chr3A 177037 178856 1819 True 432.866667 972 85.3220 1032 2690 3 chr3A.!!$R4 1658
8 TraesCS3D01G009200 chr3A 96171 97699 1528 True 267.833333 512 92.8960 999 2301 3 chr3A.!!$R3 1302

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
974 3550 0.113385 TCCATCCCTCCTCCTCGATC 59.887 60.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2760 6822 0.035152 ACAGCCATCGCTTCCATCAA 60.035 50.0 0.0 0.0 45.55 2.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 6.399204 CATACAACGTAGTGTTTTCCCTAC 57.601 41.667 0.00 0.00 45.00 3.18
24 25 4.677673 ACAACGTAGTGTTTTCCCTACT 57.322 40.909 0.00 0.00 45.00 2.57
25 26 5.027293 ACAACGTAGTGTTTTCCCTACTT 57.973 39.130 0.00 0.00 45.00 2.24
26 27 6.160576 ACAACGTAGTGTTTTCCCTACTTA 57.839 37.500 0.00 0.00 45.00 2.24
27 28 6.762333 ACAACGTAGTGTTTTCCCTACTTAT 58.238 36.000 0.00 0.00 45.00 1.73
28 29 7.219322 ACAACGTAGTGTTTTCCCTACTTATT 58.781 34.615 0.00 0.00 45.00 1.40
29 30 7.716560 ACAACGTAGTGTTTTCCCTACTTATTT 59.283 33.333 0.00 0.00 45.00 1.40
30 31 7.662604 ACGTAGTGTTTTCCCTACTTATTTG 57.337 36.000 0.00 0.00 42.51 2.32
31 32 7.219322 ACGTAGTGTTTTCCCTACTTATTTGT 58.781 34.615 0.00 0.00 42.51 2.83
32 33 7.172019 ACGTAGTGTTTTCCCTACTTATTTGTG 59.828 37.037 0.00 0.00 42.51 3.33
33 34 6.327279 AGTGTTTTCCCTACTTATTTGTGC 57.673 37.500 0.00 0.00 0.00 4.57
34 35 5.830991 AGTGTTTTCCCTACTTATTTGTGCA 59.169 36.000 0.00 0.00 0.00 4.57
35 36 6.493458 AGTGTTTTCCCTACTTATTTGTGCAT 59.507 34.615 0.00 0.00 0.00 3.96
36 37 7.015195 AGTGTTTTCCCTACTTATTTGTGCATT 59.985 33.333 0.00 0.00 0.00 3.56
37 38 8.301002 GTGTTTTCCCTACTTATTTGTGCATTA 58.699 33.333 0.00 0.00 0.00 1.90
38 39 9.030452 TGTTTTCCCTACTTATTTGTGCATTAT 57.970 29.630 0.00 0.00 0.00 1.28
43 44 9.778741 TCCCTACTTATTTGTGCATTATAAGAG 57.221 33.333 21.98 16.44 36.07 2.85
44 45 9.003658 CCCTACTTATTTGTGCATTATAAGAGG 57.996 37.037 21.98 20.83 36.07 3.69
45 46 9.561069 CCTACTTATTTGTGCATTATAAGAGGT 57.439 33.333 21.98 8.88 36.07 3.85
49 50 9.831737 CTTATTTGTGCATTATAAGAGGTATGC 57.168 33.333 15.06 0.00 42.75 3.14
50 51 5.922739 TTGTGCATTATAAGAGGTATGCG 57.077 39.130 0.00 0.00 44.77 4.73
51 52 4.956085 TGTGCATTATAAGAGGTATGCGT 58.044 39.130 0.00 0.00 44.77 5.24
52 53 5.364778 TGTGCATTATAAGAGGTATGCGTT 58.635 37.500 0.00 0.00 44.77 4.84
53 54 5.465390 TGTGCATTATAAGAGGTATGCGTTC 59.535 40.000 0.00 0.00 44.77 3.95
54 55 4.684242 TGCATTATAAGAGGTATGCGTTCG 59.316 41.667 0.00 0.00 44.77 3.95
55 56 4.434330 GCATTATAAGAGGTATGCGTTCGC 60.434 45.833 10.34 10.34 34.70 4.70
56 57 2.150397 ATAAGAGGTATGCGTTCGCC 57.850 50.000 14.44 0.00 0.00 5.54
57 58 0.248743 TAAGAGGTATGCGTTCGCCG 60.249 55.000 14.44 0.00 40.40 6.46
58 59 2.901051 AAGAGGTATGCGTTCGCCGG 62.901 60.000 14.44 0.00 36.94 6.13
70 71 2.962089 TCGCCGGCGAATTACTAAC 58.038 52.632 46.56 2.67 46.01 2.34
71 72 0.457035 TCGCCGGCGAATTACTAACT 59.543 50.000 46.56 0.00 46.01 2.24
72 73 1.675483 TCGCCGGCGAATTACTAACTA 59.325 47.619 46.56 21.78 46.01 2.24
73 74 2.098934 TCGCCGGCGAATTACTAACTAA 59.901 45.455 46.56 21.55 46.01 2.24
74 75 3.054878 CGCCGGCGAATTACTAACTAAT 58.945 45.455 44.86 0.00 42.83 1.73
75 76 3.492011 CGCCGGCGAATTACTAACTAATT 59.508 43.478 44.86 0.00 42.83 1.40
76 77 4.681025 CGCCGGCGAATTACTAACTAATTA 59.319 41.667 44.86 0.00 42.83 1.40
77 78 5.175491 CGCCGGCGAATTACTAACTAATTAA 59.825 40.000 44.86 0.00 42.83 1.40
78 79 6.128742 CGCCGGCGAATTACTAACTAATTAAT 60.129 38.462 44.86 0.00 42.83 1.40
79 80 7.062138 CGCCGGCGAATTACTAACTAATTAATA 59.938 37.037 44.86 0.00 42.83 0.98
80 81 8.876790 GCCGGCGAATTACTAACTAATTAATAT 58.123 33.333 12.58 0.00 35.51 1.28
108 109 6.986817 ACAAATAATATCTCACTTCCCTGTCG 59.013 38.462 0.00 0.00 0.00 4.35
128 129 3.909995 TCGGTCCATATCTCAATTCCCAT 59.090 43.478 0.00 0.00 0.00 4.00
138 139 9.519191 CATATCTCAATTCCCATGGTGTATTTA 57.481 33.333 11.73 0.00 0.00 1.40
151 152 6.522625 TGGTGTATTTATGACATTTGTGGG 57.477 37.500 0.00 0.00 0.00 4.61
156 157 6.721668 TGTATTTATGACATTTGTGGGGACAA 59.278 34.615 0.00 0.00 46.06 3.18
183 184 4.044426 TCGATGTCATCACGTGATCATTC 58.956 43.478 27.79 19.07 39.48 2.67
201 206 6.468333 TCATTCATTAATGGGGTCATTGTG 57.532 37.500 15.36 2.70 42.93 3.33
206 211 5.418524 TCATTAATGGGGTCATTGTGACTTG 59.581 40.000 15.36 0.00 46.19 3.16
207 212 2.978156 ATGGGGTCATTGTGACTTGT 57.022 45.000 9.66 0.00 46.19 3.16
208 213 4.380843 AATGGGGTCATTGTGACTTGTA 57.619 40.909 9.66 0.00 46.19 2.41
209 214 4.591321 ATGGGGTCATTGTGACTTGTAT 57.409 40.909 9.66 0.00 46.19 2.29
271 276 1.739466 TGATTGCGAAAGGCTGCTAAG 59.261 47.619 0.00 0.00 44.05 2.18
275 280 2.002127 CGAAAGGCTGCTAAGAGCG 58.998 57.895 0.00 0.00 46.26 5.03
285 290 1.733912 TGCTAAGAGCGCTTGTGATTG 59.266 47.619 13.26 0.00 46.26 2.67
329 334 5.116983 GGTTGATAGTGATTGTGTTTTTGCG 59.883 40.000 0.00 0.00 0.00 4.85
330 335 5.431420 TGATAGTGATTGTGTTTTTGCGT 57.569 34.783 0.00 0.00 0.00 5.24
347 352 4.668576 TGCGTACGTAGTGCCTATATAC 57.331 45.455 17.90 0.00 45.73 1.47
348 353 4.064388 TGCGTACGTAGTGCCTATATACA 58.936 43.478 17.90 0.00 45.73 2.29
349 354 4.083855 TGCGTACGTAGTGCCTATATACAC 60.084 45.833 17.90 0.00 45.73 2.90
387 392 2.006888 GGCTAGCAGCAACGTTATCAA 58.993 47.619 18.24 0.00 44.75 2.57
405 418 8.670668 CGTTATCAATCGCACTGTATATATACG 58.329 37.037 16.29 13.36 36.06 3.06
436 671 2.159920 CGATTGCACAGTTCGTCTCTTG 60.160 50.000 0.00 0.00 0.00 3.02
444 679 2.540101 CAGTTCGTCTCTTGTTCACACC 59.460 50.000 0.00 0.00 0.00 4.16
445 680 2.167693 AGTTCGTCTCTTGTTCACACCA 59.832 45.455 0.00 0.00 0.00 4.17
447 682 2.028876 TCGTCTCTTGTTCACACCAGA 58.971 47.619 0.00 0.00 0.00 3.86
448 683 2.429250 TCGTCTCTTGTTCACACCAGAA 59.571 45.455 0.00 0.00 0.00 3.02
451 686 3.561725 GTCTCTTGTTCACACCAGAAAGG 59.438 47.826 0.00 0.00 45.67 3.11
463 698 4.526438 ACCAGAAAGGGGATATCCAAAG 57.474 45.455 23.27 5.52 43.89 2.77
465 700 3.225940 CAGAAAGGGGATATCCAAAGGC 58.774 50.000 23.27 9.22 37.91 4.35
468 703 2.986534 AGGGGATATCCAAAGGCATG 57.013 50.000 23.27 0.00 37.91 4.06
470 705 3.335748 AGGGGATATCCAAAGGCATGTA 58.664 45.455 23.27 0.00 37.91 2.29
471 706 3.925370 AGGGGATATCCAAAGGCATGTAT 59.075 43.478 23.27 0.00 37.91 2.29
474 709 5.324409 GGGATATCCAAAGGCATGTATTGA 58.676 41.667 23.27 0.00 37.91 2.57
476 711 6.127535 GGGATATCCAAAGGCATGTATTGATG 60.128 42.308 23.27 0.00 37.91 3.07
481 716 7.984422 TCCAAAGGCATGTATTGATGTATAG 57.016 36.000 8.29 0.00 0.00 1.31
484 719 8.721478 CCAAAGGCATGTATTGATGTATAGTAC 58.279 37.037 8.29 0.00 0.00 2.73
485 720 9.494271 CAAAGGCATGTATTGATGTATAGTACT 57.506 33.333 0.00 0.00 0.00 2.73
498 733 9.639601 TGATGTATAGTACTATACTTGCATTGC 57.360 33.333 35.88 23.39 44.96 3.56
499 734 9.862371 GATGTATAGTACTATACTTGCATTGCT 57.138 33.333 35.88 18.62 44.96 3.91
501 736 8.088365 TGTATAGTACTATACTTGCATTGCTGG 58.912 37.037 35.88 5.16 44.96 4.85
502 737 5.359194 AGTACTATACTTGCATTGCTGGT 57.641 39.130 10.49 10.61 34.86 4.00
503 738 6.479972 AGTACTATACTTGCATTGCTGGTA 57.520 37.500 10.49 12.32 34.86 3.25
504 739 6.281405 AGTACTATACTTGCATTGCTGGTAC 58.719 40.000 10.49 10.94 34.86 3.34
505 740 4.119862 ACTATACTTGCATTGCTGGTACG 58.880 43.478 10.49 9.56 0.00 3.67
508 743 2.009774 ACTTGCATTGCTGGTACGATC 58.990 47.619 10.49 0.00 0.00 3.69
532 2983 3.708734 GACCGTGAAACCGCGTGG 61.709 66.667 14.93 14.93 42.84 4.94
550 3001 1.050767 GGTCGTCGTTTTCTCACTCG 58.949 55.000 0.00 0.00 0.00 4.18
555 3006 1.785430 GTCGTTTTCTCACTCGGTCAC 59.215 52.381 0.00 0.00 0.00 3.67
557 3008 1.787155 CGTTTTCTCACTCGGTCACTG 59.213 52.381 0.00 0.00 0.00 3.66
571 3022 1.812922 CACTGCTGCTCGTGGATCC 60.813 63.158 4.20 4.20 0.00 3.36
572 3023 2.202987 CTGCTGCTCGTGGATCCC 60.203 66.667 9.90 0.00 0.00 3.85
574 3025 2.249413 CTGCTGCTCGTGGATCCCTT 62.249 60.000 9.90 0.00 0.00 3.95
576 3027 1.900351 CTGCTCGTGGATCCCTTCA 59.100 57.895 9.90 0.00 0.00 3.02
577 3028 0.460987 CTGCTCGTGGATCCCTTCAC 60.461 60.000 9.90 0.00 0.00 3.18
578 3029 1.153349 GCTCGTGGATCCCTTCACC 60.153 63.158 9.90 0.00 0.00 4.02
579 3030 1.141881 CTCGTGGATCCCTTCACCG 59.858 63.158 9.90 2.18 0.00 4.94
580 3031 1.605058 CTCGTGGATCCCTTCACCGT 61.605 60.000 9.90 0.00 0.00 4.83
582 3033 1.884075 CGTGGATCCCTTCACCGTCA 61.884 60.000 9.90 0.00 0.00 4.35
583 3034 0.391263 GTGGATCCCTTCACCGTCAC 60.391 60.000 9.90 0.00 0.00 3.67
584 3035 1.153628 GGATCCCTTCACCGTCACG 60.154 63.158 0.00 0.00 0.00 4.35
586 3037 3.642778 ATCCCTTCACCGTCACGCG 62.643 63.158 3.53 3.53 40.95 6.01
610 3069 3.947196 GTGCATCTCATCAACCCATGTTA 59.053 43.478 0.00 0.00 32.09 2.41
612 3071 3.002656 GCATCTCATCAACCCATGTTACG 59.997 47.826 0.00 0.00 32.09 3.18
614 3073 3.857052 TCTCATCAACCCATGTTACGTC 58.143 45.455 0.00 0.00 32.09 4.34
615 3074 2.603110 CTCATCAACCCATGTTACGTCG 59.397 50.000 0.00 0.00 32.09 5.12
618 3082 1.083489 CAACCCATGTTACGTCGCAT 58.917 50.000 0.00 0.00 32.09 4.73
627 3091 2.984471 TGTTACGTCGCATTTCACTCTC 59.016 45.455 0.00 0.00 0.00 3.20
634 3098 1.266404 CGCATTTCACTCTCGTTACGC 60.266 52.381 0.00 0.00 0.00 4.42
636 3100 0.989890 ATTTCACTCTCGTTACGCGC 59.010 50.000 5.73 0.00 41.07 6.86
637 3101 1.332180 TTTCACTCTCGTTACGCGCG 61.332 55.000 30.96 30.96 41.07 6.86
638 3102 2.448153 TTCACTCTCGTTACGCGCGT 62.448 55.000 39.05 39.05 41.07 6.01
640 3104 3.238241 CTCTCGTTACGCGCGTGG 61.238 66.667 42.78 30.18 41.07 4.94
644 3108 4.553101 CGTTACGCGCGTGGCATC 62.553 66.667 42.78 25.10 43.84 3.91
646 3110 3.483665 TTACGCGCGTGGCATCAC 61.484 61.111 42.78 0.00 43.84 3.06
649 3133 4.164664 CGCGCGTGGCATCACATT 62.165 61.111 24.19 0.00 43.79 2.71
652 3136 0.658244 GCGCGTGGCATCACATTATG 60.658 55.000 8.43 0.00 43.79 1.90
666 3150 4.035675 TCACATTATGTTTGTGCAACGTGA 59.964 37.500 0.00 0.00 43.29 4.35
667 3151 4.379498 CACATTATGTTTGTGCAACGTGAG 59.621 41.667 0.00 0.00 42.39 3.51
668 3152 4.274705 ACATTATGTTTGTGCAACGTGAGA 59.725 37.500 0.00 0.00 42.39 3.27
669 3153 4.466567 TTATGTTTGTGCAACGTGAGAG 57.533 40.909 0.00 0.00 42.39 3.20
689 3193 1.635660 GCGCGAAAACATACACGTTTC 59.364 47.619 12.10 0.00 38.13 2.78
693 3197 3.212103 CGAAAACATACACGTTTCGGTG 58.788 45.455 8.10 0.00 38.13 4.94
698 3202 0.971386 ATACACGTTTCGGTGGACCT 59.029 50.000 0.00 0.00 42.23 3.85
699 3203 0.314935 TACACGTTTCGGTGGACCTC 59.685 55.000 0.00 0.00 42.23 3.85
700 3204 1.366366 CACGTTTCGGTGGACCTCT 59.634 57.895 0.00 0.00 34.27 3.69
701 3205 0.944311 CACGTTTCGGTGGACCTCTG 60.944 60.000 0.00 0.00 34.27 3.35
702 3206 1.111116 ACGTTTCGGTGGACCTCTGA 61.111 55.000 0.72 0.72 0.00 3.27
703 3207 0.666577 CGTTTCGGTGGACCTCTGAC 60.667 60.000 4.51 0.00 0.00 3.51
704 3208 0.680061 GTTTCGGTGGACCTCTGACT 59.320 55.000 4.51 0.00 0.00 3.41
705 3209 1.070289 GTTTCGGTGGACCTCTGACTT 59.930 52.381 4.51 0.00 0.00 3.01
706 3210 1.420430 TTCGGTGGACCTCTGACTTT 58.580 50.000 4.51 0.00 0.00 2.66
707 3211 0.966920 TCGGTGGACCTCTGACTTTC 59.033 55.000 0.72 0.00 0.00 2.62
709 3213 1.056660 GGTGGACCTCTGACTTTCCA 58.943 55.000 0.00 0.00 35.71 3.53
721 3243 2.067013 GACTTTCCACCGTTGCTCTAC 58.933 52.381 0.00 0.00 0.00 2.59
736 3258 2.884639 GCTCTACTCCTCTCCACTCATC 59.115 54.545 0.00 0.00 0.00 2.92
746 3268 5.133491 TCCTCTCCACTCATCTTCATCTCTA 59.867 44.000 0.00 0.00 0.00 2.43
755 3277 7.662669 CACTCATCTTCATCTCTATCTCTCTCA 59.337 40.741 0.00 0.00 0.00 3.27
756 3278 8.219868 ACTCATCTTCATCTCTATCTCTCTCAA 58.780 37.037 0.00 0.00 0.00 3.02
757 3279 8.993404 TCATCTTCATCTCTATCTCTCTCAAA 57.007 34.615 0.00 0.00 0.00 2.69
758 3280 9.418839 TCATCTTCATCTCTATCTCTCTCAAAA 57.581 33.333 0.00 0.00 0.00 2.44
813 3343 5.954752 AGATTCCATCTCCTTTCTTTTTCCC 59.045 40.000 0.00 0.00 33.42 3.97
814 3344 5.339423 TTCCATCTCCTTTCTTTTTCCCT 57.661 39.130 0.00 0.00 0.00 4.20
815 3345 4.923415 TCCATCTCCTTTCTTTTTCCCTC 58.077 43.478 0.00 0.00 0.00 4.30
816 3346 3.691609 CCATCTCCTTTCTTTTTCCCTCG 59.308 47.826 0.00 0.00 0.00 4.63
817 3347 2.779506 TCTCCTTTCTTTTTCCCTCGC 58.220 47.619 0.00 0.00 0.00 5.03
818 3348 2.372172 TCTCCTTTCTTTTTCCCTCGCT 59.628 45.455 0.00 0.00 0.00 4.93
819 3349 3.149981 CTCCTTTCTTTTTCCCTCGCTT 58.850 45.455 0.00 0.00 0.00 4.68
820 3350 3.562182 TCCTTTCTTTTTCCCTCGCTTT 58.438 40.909 0.00 0.00 0.00 3.51
821 3351 3.568430 TCCTTTCTTTTTCCCTCGCTTTC 59.432 43.478 0.00 0.00 0.00 2.62
822 3352 3.570125 CCTTTCTTTTTCCCTCGCTTTCT 59.430 43.478 0.00 0.00 0.00 2.52
823 3353 4.320567 CCTTTCTTTTTCCCTCGCTTTCTC 60.321 45.833 0.00 0.00 0.00 2.87
824 3354 2.413837 TCTTTTTCCCTCGCTTTCTCG 58.586 47.619 0.00 0.00 0.00 4.04
856 3398 0.612174 TCTTCCTCCTCCGTCCACTG 60.612 60.000 0.00 0.00 0.00 3.66
857 3399 1.608717 CTTCCTCCTCCGTCCACTGG 61.609 65.000 0.00 0.00 0.00 4.00
858 3400 2.037367 CCTCCTCCGTCCACTGGA 59.963 66.667 0.00 0.00 0.00 3.86
859 3401 1.609501 CCTCCTCCGTCCACTGGAA 60.610 63.158 0.00 0.00 34.44 3.53
863 3405 0.978146 CCTCCGTCCACTGGAATCCT 60.978 60.000 0.00 0.00 34.44 3.24
866 3408 0.176680 CCGTCCACTGGAATCCTCTG 59.823 60.000 0.00 0.00 31.38 3.35
867 3409 0.460987 CGTCCACTGGAATCCTCTGC 60.461 60.000 0.00 0.00 31.38 4.26
868 3410 0.908198 GTCCACTGGAATCCTCTGCT 59.092 55.000 0.00 0.00 31.38 4.24
886 3437 5.917462 TCTGCTGCTGTATAAATAAGCTCA 58.083 37.500 0.00 0.00 37.82 4.26
887 3438 6.348498 TCTGCTGCTGTATAAATAAGCTCAA 58.652 36.000 0.00 0.00 37.82 3.02
889 3440 6.115446 TGCTGCTGTATAAATAAGCTCAACT 58.885 36.000 0.00 0.00 37.82 3.16
890 3441 7.272244 TGCTGCTGTATAAATAAGCTCAACTA 58.728 34.615 0.00 0.00 37.82 2.24
893 3444 7.561251 TGCTGTATAAATAAGCTCAACTACCA 58.439 34.615 0.00 0.00 37.82 3.25
894 3445 7.710907 TGCTGTATAAATAAGCTCAACTACCAG 59.289 37.037 0.00 0.00 37.82 4.00
895 3446 7.307455 GCTGTATAAATAAGCTCAACTACCAGC 60.307 40.741 0.00 0.00 34.05 4.85
900 3451 1.352083 AGCTCAACTACCAGCTCCAA 58.648 50.000 0.00 0.00 42.60 3.53
902 3453 1.946283 GCTCAACTACCAGCTCCAACC 60.946 57.143 0.00 0.00 32.48 3.77
939 3495 1.281867 TCCATTCCATCCACACCTCAC 59.718 52.381 0.00 0.00 0.00 3.51
962 3538 2.191641 GCTCACCTGCTCCATCCC 59.808 66.667 0.00 0.00 0.00 3.85
970 3546 1.074926 TGCTCCATCCCTCCTCCTC 60.075 63.158 0.00 0.00 0.00 3.71
972 3548 1.539165 CTCCATCCCTCCTCCTCGA 59.461 63.158 0.00 0.00 0.00 4.04
973 3549 0.114168 CTCCATCCCTCCTCCTCGAT 59.886 60.000 0.00 0.00 0.00 3.59
974 3550 0.113385 TCCATCCCTCCTCCTCGATC 59.887 60.000 0.00 0.00 0.00 3.69
975 3551 1.247419 CCATCCCTCCTCCTCGATCG 61.247 65.000 9.36 9.36 0.00 3.69
976 3552 1.075836 ATCCCTCCTCCTCGATCGG 59.924 63.158 16.41 5.93 0.00 4.18
978 3554 2.516405 CCTCCTCCTCGATCGGGA 59.484 66.667 18.72 19.44 0.00 5.14
985 3561 0.394938 TCCTCGATCGGGAGAGAGAG 59.605 60.000 18.72 2.61 45.48 3.20
1182 3851 2.693591 CCTCCGCCACTATTCTTCTACA 59.306 50.000 0.00 0.00 0.00 2.74
1221 3890 4.035441 TCCAGCAACAAGGTACGTAAAAAC 59.965 41.667 0.00 0.00 0.00 2.43
1225 3964 4.965762 GCAACAAGGTACGTAAAAACACTC 59.034 41.667 0.00 0.00 0.00 3.51
1255 4080 3.173151 CCCCCAAAAGGCAGACTAATTT 58.827 45.455 0.00 0.00 0.00 1.82
1258 4083 3.259123 CCCAAAAGGCAGACTAATTTGCT 59.741 43.478 0.22 0.00 40.15 3.91
1276 4110 1.287730 CTCAACTCACGCAGCTGTCC 61.288 60.000 16.64 0.00 0.00 4.02
1285 4119 2.046892 CAGCTGTCCGGGGAACAG 60.047 66.667 15.63 15.63 34.83 3.16
1289 4123 1.004918 CTGTCCGGGGAACAGACAC 60.005 63.158 15.00 0.00 39.41 3.67
1305 4139 3.997021 CAGACACCTGATTAACCACACTC 59.003 47.826 0.00 0.00 43.02 3.51
1313 4147 5.395324 CCTGATTAACCACACTCTTACCGAT 60.395 44.000 0.00 0.00 0.00 4.18
1338 4195 5.512082 CAGTAACACGCAGTAGAGAATACAC 59.488 44.000 0.00 0.00 41.61 2.90
1343 4201 6.496571 ACACGCAGTAGAGAATACACTATTC 58.503 40.000 0.00 0.00 41.61 1.75
1432 4477 4.890088 TGTGTGGTCCACTGAATTAGTAC 58.110 43.478 22.56 9.60 44.81 2.73
1456 4501 1.562008 TGTCTCAACTTGGTTGGTGGA 59.438 47.619 9.98 4.73 42.99 4.02
1458 4503 2.123589 TCTCAACTTGGTTGGTGGAGA 58.876 47.619 9.98 0.00 42.99 3.71
1460 4505 1.562008 TCAACTTGGTTGGTGGAGACA 59.438 47.619 9.98 0.00 42.99 3.41
1471 4516 1.129326 GTGGAGACAAAGTGACGACG 58.871 55.000 0.00 0.00 46.06 5.12
1522 4591 3.474806 GGCACGTGTCAGATTCGG 58.525 61.111 16.80 0.00 0.00 4.30
1524 4593 1.626654 GGCACGTGTCAGATTCGGTG 61.627 60.000 16.80 0.00 0.00 4.94
1527 4596 1.374125 CGTGTCAGATTCGGTGGCA 60.374 57.895 0.00 0.00 0.00 4.92
1529 4598 0.320771 GTGTCAGATTCGGTGGCAGT 60.321 55.000 0.00 0.00 27.83 4.40
1530 4599 1.067142 GTGTCAGATTCGGTGGCAGTA 60.067 52.381 0.00 0.00 27.83 2.74
1531 4600 1.204704 TGTCAGATTCGGTGGCAGTAG 59.795 52.381 0.00 0.00 0.00 2.57
1533 4602 0.824109 CAGATTCGGTGGCAGTAGGA 59.176 55.000 0.00 0.00 0.00 2.94
1552 4621 4.396522 AGGAGCCATAGAAATTGATCAGC 58.603 43.478 0.00 0.00 0.00 4.26
1575 4662 4.082408 CGTAGTACCACTCACTCATTTGGA 60.082 45.833 0.00 0.00 33.02 3.53
1579 4698 6.407202 AGTACCACTCACTCATTTGGATAAC 58.593 40.000 0.00 0.00 33.02 1.89
1585 4704 8.906867 CCACTCACTCATTTGGATAACAATTAT 58.093 33.333 0.00 0.00 39.21 1.28
1642 4771 8.137210 AGAAAAATTAAAATGTTTGGTCGGTG 57.863 30.769 0.00 0.00 0.00 4.94
1720 4874 3.806521 CCTCTGATTCGATTCACATGGAC 59.193 47.826 5.92 0.00 0.00 4.02
1958 5904 4.415332 GACGACCTCAAGCGCCGA 62.415 66.667 2.29 0.00 0.00 5.54
2060 6042 2.573869 CCTGTGATCGAGGTGCGT 59.426 61.111 2.91 0.00 41.80 5.24
2207 6192 2.159366 CGGCGACAAGATCTTCTACACT 60.159 50.000 4.57 0.00 0.00 3.55
2313 6304 1.376942 GTCTCGTCCTCCGTCCTCA 60.377 63.158 0.00 0.00 37.94 3.86
2323 6314 2.103771 CCTCCGTCCTCATGACATGATT 59.896 50.000 18.28 0.00 44.71 2.57
2333 6324 7.967303 GTCCTCATGACATGATTTCTTTCTTTC 59.033 37.037 18.28 0.00 43.85 2.62
2334 6325 7.886970 TCCTCATGACATGATTTCTTTCTTTCT 59.113 33.333 18.28 0.00 38.85 2.52
2335 6326 8.182881 CCTCATGACATGATTTCTTTCTTTCTC 58.817 37.037 18.28 0.00 38.85 2.87
2336 6327 8.859236 TCATGACATGATTTCTTTCTTTCTCT 57.141 30.769 14.24 0.00 33.59 3.10
2337 6328 8.944029 TCATGACATGATTTCTTTCTTTCTCTC 58.056 33.333 14.24 0.00 33.59 3.20
2338 6329 8.948145 CATGACATGATTTCTTTCTTTCTCTCT 58.052 33.333 10.03 0.00 0.00 3.10
2339 6330 8.915057 TGACATGATTTCTTTCTTTCTCTCTT 57.085 30.769 0.00 0.00 0.00 2.85
2340 6331 9.347240 TGACATGATTTCTTTCTTTCTCTCTTT 57.653 29.630 0.00 0.00 0.00 2.52
2341 6332 9.824534 GACATGATTTCTTTCTTTCTCTCTTTC 57.175 33.333 0.00 0.00 0.00 2.62
2342 6333 9.571816 ACATGATTTCTTTCTTTCTCTCTTTCT 57.428 29.630 0.00 0.00 0.00 2.52
2394 6435 4.647424 AGCTTAGCTTAGTACTGCTCTG 57.353 45.455 10.75 6.91 40.35 3.35
2457 6505 3.273434 AGTGTAGCCATGTACTTGCATG 58.727 45.455 3.24 0.00 44.18 4.06
2535 6585 6.859112 TTCTACTAAGAAGGCTTGAGACAT 57.141 37.500 3.46 0.00 36.80 3.06
2536 6586 6.214191 TCTACTAAGAAGGCTTGAGACATG 57.786 41.667 3.46 0.00 35.56 3.21
2537 6587 4.213564 ACTAAGAAGGCTTGAGACATGG 57.786 45.455 3.46 0.00 35.56 3.66
2538 6588 2.503895 AAGAAGGCTTGAGACATGGG 57.496 50.000 3.46 0.00 31.83 4.00
2541 6591 0.773644 AAGGCTTGAGACATGGGTGT 59.226 50.000 0.00 0.00 42.49 4.16
2545 6595 0.322816 CTTGAGACATGGGTGTGGGG 60.323 60.000 0.00 0.00 39.09 4.96
2556 6606 1.453928 GTGTGGGGGCATTAGGCTC 60.454 63.158 0.00 0.00 44.66 4.70
2571 6621 1.959848 GCTCTGTTTGGTTGAGCCC 59.040 57.895 0.00 0.00 45.12 5.19
2588 6638 2.564504 AGCCCAAGATTCTGAAAAAGCC 59.435 45.455 0.00 0.00 0.00 4.35
2651 6713 3.519908 CGTGATCGCTTCTTTGAAACA 57.480 42.857 4.48 0.00 0.00 2.83
2658 6720 1.065551 GCTTCTTTGAAACAGCCACGT 59.934 47.619 0.00 0.00 0.00 4.49
2666 6728 1.237285 AAACAGCCACGTGATCTGCC 61.237 55.000 26.68 7.59 0.00 4.85
2682 6744 2.677228 CCTGGCTTGGGGAATCGT 59.323 61.111 0.00 0.00 0.00 3.73
2691 6753 1.326951 TGGGGAATCGTGCGAGATCA 61.327 55.000 0.00 0.00 0.00 2.92
2703 6765 0.891373 CGAGATCACGGGGCTATCAT 59.109 55.000 4.47 0.00 0.00 2.45
2725 6787 2.532531 CGTGATCGCTGCTTTGAAAT 57.467 45.000 4.48 0.00 0.00 2.17
2728 6790 2.162208 GTGATCGCTGCTTTGAAATGGA 59.838 45.455 0.00 0.00 0.00 3.41
2731 6793 1.266718 TCGCTGCTTTGAAATGGACAC 59.733 47.619 0.00 0.00 0.00 3.67
2760 6822 6.523840 TCTGCATGGCTTTTTCTTATGTTTT 58.476 32.000 0.00 0.00 0.00 2.43
2762 6824 6.957150 TGCATGGCTTTTTCTTATGTTTTTG 58.043 32.000 0.00 0.00 0.00 2.44
2764 6826 7.444792 TGCATGGCTTTTTCTTATGTTTTTGAT 59.555 29.630 0.00 0.00 0.00 2.57
2765 6827 7.747357 GCATGGCTTTTTCTTATGTTTTTGATG 59.253 33.333 0.00 0.00 0.00 3.07
2766 6828 7.727331 TGGCTTTTTCTTATGTTTTTGATGG 57.273 32.000 0.00 0.00 0.00 3.51
2768 6830 7.989741 TGGCTTTTTCTTATGTTTTTGATGGAA 59.010 29.630 0.00 0.00 0.00 3.53
2770 6832 8.011673 GCTTTTTCTTATGTTTTTGATGGAAGC 58.988 33.333 0.00 0.00 0.00 3.86
2772 6834 6.567687 TTCTTATGTTTTTGATGGAAGCGA 57.432 33.333 0.00 0.00 0.00 4.93
2773 6835 6.757897 TCTTATGTTTTTGATGGAAGCGAT 57.242 33.333 0.00 0.00 0.00 4.58
2775 6837 3.574284 TGTTTTTGATGGAAGCGATGG 57.426 42.857 0.00 0.00 0.00 3.51
2776 6838 2.262211 GTTTTTGATGGAAGCGATGGC 58.738 47.619 0.00 0.00 40.37 4.40
2790 6852 4.238761 GCGATGGCTGTTATACTAGACA 57.761 45.455 0.00 0.00 36.17 3.41
2792 6854 5.230942 GCGATGGCTGTTATACTAGACATT 58.769 41.667 0.00 0.00 42.55 2.71
2793 6855 5.696724 GCGATGGCTGTTATACTAGACATTT 59.303 40.000 0.00 0.00 42.55 2.32
2794 6856 6.346919 GCGATGGCTGTTATACTAGACATTTG 60.347 42.308 0.00 3.79 42.55 2.32
2795 6857 6.346919 CGATGGCTGTTATACTAGACATTTGC 60.347 42.308 0.00 0.00 42.55 3.68
2796 6858 5.739959 TGGCTGTTATACTAGACATTTGCA 58.260 37.500 0.00 0.00 0.00 4.08
2797 6859 6.176896 TGGCTGTTATACTAGACATTTGCAA 58.823 36.000 0.00 0.00 0.00 4.08
2806 10650 1.529438 AGACATTTGCAACCGTGTACG 59.471 47.619 0.00 0.00 39.44 3.67
2899 10743 4.963318 CATGGTAGTACATGGTCCAGAT 57.037 45.455 2.06 0.00 43.44 2.90
2904 10748 1.137086 AGTACATGGTCCAGATCGTGC 59.863 52.381 0.00 0.00 31.74 5.34
2905 10749 1.137086 GTACATGGTCCAGATCGTGCT 59.863 52.381 0.00 0.00 31.74 4.40
2913 10757 1.434622 CCAGATCGTGCTGTGGATGC 61.435 60.000 6.55 0.00 31.25 3.91
2914 10758 0.741927 CAGATCGTGCTGTGGATGCA 60.742 55.000 0.00 0.00 38.19 3.96
2937 10794 6.092533 GCACTTAAACTTAATTTGGCATGCAT 59.907 34.615 21.36 0.85 31.60 3.96
2941 10798 5.927281 AACTTAATTTGGCATGCATCTCT 57.073 34.783 21.36 2.96 0.00 3.10
2979 10836 4.664267 TGGTCTGGGGCCTGAGCT 62.664 66.667 22.25 0.00 41.06 4.09
2995 10852 0.321653 AGCTTACGGCCACCAGAAAG 60.322 55.000 2.24 0.00 43.05 2.62
3001 10858 1.227853 GGCCACCAGAAAGACGTGT 60.228 57.895 0.00 0.00 0.00 4.49
3015 10872 2.559231 AGACGTGTGTGGGTTTTGTTTT 59.441 40.909 0.00 0.00 0.00 2.43
3019 10876 3.258228 GTGTGTGGGTTTTGTTTTCCAG 58.742 45.455 0.00 0.00 0.00 3.86
3037 10894 3.510360 TCCAGGAGTAAACACTGTAGCTC 59.490 47.826 0.00 0.00 0.00 4.09
3038 10895 3.511934 CCAGGAGTAAACACTGTAGCTCT 59.488 47.826 0.00 0.00 0.00 4.09
3039 10896 4.705507 CCAGGAGTAAACACTGTAGCTCTA 59.294 45.833 0.00 0.00 0.00 2.43
3040 10897 5.163602 CCAGGAGTAAACACTGTAGCTCTAG 60.164 48.000 0.00 0.00 0.00 2.43
3041 10898 5.416326 CAGGAGTAAACACTGTAGCTCTAGT 59.584 44.000 0.00 0.00 0.00 2.57
3050 10907 6.458232 CACTGTAGCTCTAGTGTTCCTATT 57.542 41.667 17.67 0.00 39.48 1.73
3051 10908 6.500041 CACTGTAGCTCTAGTGTTCCTATTC 58.500 44.000 17.67 0.00 39.48 1.75
3052 10909 6.320164 CACTGTAGCTCTAGTGTTCCTATTCT 59.680 42.308 17.67 0.00 39.48 2.40
3053 10910 6.893005 ACTGTAGCTCTAGTGTTCCTATTCTT 59.107 38.462 0.00 0.00 0.00 2.52
3054 10911 7.101652 TGTAGCTCTAGTGTTCCTATTCTTG 57.898 40.000 0.00 0.00 0.00 3.02
3055 10912 5.606348 AGCTCTAGTGTTCCTATTCTTGG 57.394 43.478 0.00 0.00 0.00 3.61
3056 10913 4.407296 AGCTCTAGTGTTCCTATTCTTGGG 59.593 45.833 0.00 0.00 0.00 4.12
3057 10914 4.698575 CTCTAGTGTTCCTATTCTTGGGC 58.301 47.826 0.00 0.00 0.00 5.36
3058 10915 4.362677 TCTAGTGTTCCTATTCTTGGGCT 58.637 43.478 0.00 0.00 0.00 5.19
3059 10916 3.636153 AGTGTTCCTATTCTTGGGCTC 57.364 47.619 0.00 0.00 0.00 4.70
3060 10917 2.912956 AGTGTTCCTATTCTTGGGCTCA 59.087 45.455 0.00 0.00 0.00 4.26
3061 10918 3.054802 AGTGTTCCTATTCTTGGGCTCAG 60.055 47.826 0.00 0.00 0.00 3.35
3062 10919 2.239654 TGTTCCTATTCTTGGGCTCAGG 59.760 50.000 0.00 0.00 0.00 3.86
3063 10920 1.511613 TCCTATTCTTGGGCTCAGGG 58.488 55.000 0.00 0.00 0.00 4.45
3064 10921 1.009552 TCCTATTCTTGGGCTCAGGGA 59.990 52.381 0.00 0.00 0.00 4.20
3065 10922 1.419387 CCTATTCTTGGGCTCAGGGAG 59.581 57.143 0.00 0.00 0.00 4.30
3066 10923 2.122768 CTATTCTTGGGCTCAGGGAGT 58.877 52.381 0.00 0.00 31.39 3.85
3067 10924 2.270434 ATTCTTGGGCTCAGGGAGTA 57.730 50.000 0.00 0.00 31.39 2.59
3068 10925 2.038863 TTCTTGGGCTCAGGGAGTAA 57.961 50.000 0.00 0.00 31.39 2.24
3069 10926 2.038863 TCTTGGGCTCAGGGAGTAAA 57.961 50.000 0.00 0.00 31.39 2.01
3070 10927 2.562296 TCTTGGGCTCAGGGAGTAAAT 58.438 47.619 0.00 0.00 31.39 1.40
3071 10928 3.731431 TCTTGGGCTCAGGGAGTAAATA 58.269 45.455 0.00 0.00 31.39 1.40
3072 10929 3.454812 TCTTGGGCTCAGGGAGTAAATAC 59.545 47.826 0.00 0.00 31.39 1.89
3073 10930 1.760613 TGGGCTCAGGGAGTAAATACG 59.239 52.381 0.00 0.00 31.39 3.06
3074 10931 1.070289 GGGCTCAGGGAGTAAATACGG 59.930 57.143 0.00 0.00 31.39 4.02
3075 10932 1.761198 GGCTCAGGGAGTAAATACGGT 59.239 52.381 0.00 0.00 31.39 4.83
3076 10933 2.483188 GGCTCAGGGAGTAAATACGGTG 60.483 54.545 0.00 0.00 31.39 4.94
3077 10934 2.483188 GCTCAGGGAGTAAATACGGTGG 60.483 54.545 0.00 0.00 31.39 4.61
3078 10935 2.764572 CTCAGGGAGTAAATACGGTGGT 59.235 50.000 0.00 0.00 0.00 4.16
3079 10936 3.175594 TCAGGGAGTAAATACGGTGGTT 58.824 45.455 0.00 0.00 0.00 3.67
3080 10937 3.196254 TCAGGGAGTAAATACGGTGGTTC 59.804 47.826 0.00 0.00 0.00 3.62
3081 10938 2.502947 AGGGAGTAAATACGGTGGTTCC 59.497 50.000 0.00 0.00 0.00 3.62
3082 10939 2.502947 GGGAGTAAATACGGTGGTTCCT 59.497 50.000 0.00 0.00 0.00 3.36
3083 10940 3.706086 GGGAGTAAATACGGTGGTTCCTA 59.294 47.826 0.00 0.00 0.00 2.94
3084 10941 4.346127 GGGAGTAAATACGGTGGTTCCTAT 59.654 45.833 0.00 0.00 0.00 2.57
3085 10942 5.163269 GGGAGTAAATACGGTGGTTCCTATT 60.163 44.000 0.00 0.00 0.00 1.73
3086 10943 6.351711 GGAGTAAATACGGTGGTTCCTATTT 58.648 40.000 0.00 0.00 35.63 1.40
3087 10944 6.259387 GGAGTAAATACGGTGGTTCCTATTTG 59.741 42.308 0.00 0.00 34.54 2.32
3088 10945 6.117488 AGTAAATACGGTGGTTCCTATTTGG 58.883 40.000 0.00 0.00 34.54 3.28
3089 10946 2.406596 TACGGTGGTTCCTATTTGGC 57.593 50.000 0.00 0.00 35.26 4.52
3090 10947 0.675522 ACGGTGGTTCCTATTTGGCG 60.676 55.000 0.00 0.00 35.26 5.69
3091 10948 1.373590 CGGTGGTTCCTATTTGGCGG 61.374 60.000 0.00 0.00 35.26 6.13
3092 10949 0.034863 GGTGGTTCCTATTTGGCGGA 60.035 55.000 0.00 0.00 35.26 5.54
3093 10950 1.409661 GGTGGTTCCTATTTGGCGGAT 60.410 52.381 0.00 0.00 35.26 4.18
3094 10951 2.375146 GTGGTTCCTATTTGGCGGATT 58.625 47.619 0.00 0.00 35.26 3.01
3095 10952 2.758423 GTGGTTCCTATTTGGCGGATTT 59.242 45.455 0.00 0.00 35.26 2.17
3096 10953 3.194755 GTGGTTCCTATTTGGCGGATTTT 59.805 43.478 0.00 0.00 35.26 1.82
3097 10954 3.835395 TGGTTCCTATTTGGCGGATTTTT 59.165 39.130 0.00 0.00 35.26 1.94
3129 10986 8.789825 CAGGAAATCTTTCATGCTAGCTATAT 57.210 34.615 17.23 0.00 41.23 0.86
3130 10987 9.228949 CAGGAAATCTTTCATGCTAGCTATATT 57.771 33.333 17.23 3.62 41.23 1.28
3154 11011 8.500753 TTAACTTCAAATAATGCCTACATCGT 57.499 30.769 0.00 0.00 34.62 3.73
3155 11012 6.604735 ACTTCAAATAATGCCTACATCGTC 57.395 37.500 0.00 0.00 34.62 4.20
3156 11013 5.234329 ACTTCAAATAATGCCTACATCGTCG 59.766 40.000 0.00 0.00 34.62 5.12
3157 11014 4.055360 TCAAATAATGCCTACATCGTCGG 58.945 43.478 0.00 0.00 34.62 4.79
3158 11015 3.746045 AATAATGCCTACATCGTCGGT 57.254 42.857 0.00 0.00 34.62 4.69
3159 11016 3.746045 ATAATGCCTACATCGTCGGTT 57.254 42.857 0.00 0.00 34.62 4.44
3160 11017 4.859304 ATAATGCCTACATCGTCGGTTA 57.141 40.909 0.00 0.00 34.62 2.85
3161 11018 3.530265 AATGCCTACATCGTCGGTTAA 57.470 42.857 0.00 0.00 34.62 2.01
3162 11019 3.530265 ATGCCTACATCGTCGGTTAAA 57.470 42.857 0.00 0.00 0.00 1.52
3163 11020 3.316071 TGCCTACATCGTCGGTTAAAA 57.684 42.857 0.00 0.00 0.00 1.52
3164 11021 3.661944 TGCCTACATCGTCGGTTAAAAA 58.338 40.909 0.00 0.00 0.00 1.94
3204 11061 4.475944 GAATGAATCCAACCACAAAGACG 58.524 43.478 0.00 0.00 0.00 4.18
3205 11062 3.201353 TGAATCCAACCACAAAGACGA 57.799 42.857 0.00 0.00 0.00 4.20
3206 11063 3.750371 TGAATCCAACCACAAAGACGAT 58.250 40.909 0.00 0.00 0.00 3.73
3207 11064 3.501828 TGAATCCAACCACAAAGACGATG 59.498 43.478 0.00 0.00 0.00 3.84
3208 11065 1.890876 TCCAACCACAAAGACGATGG 58.109 50.000 0.00 0.00 39.57 3.51
3210 11067 1.535462 CCAACCACAAAGACGATGGTC 59.465 52.381 0.00 0.00 46.18 4.02
3222 11079 2.921754 GACGATGGTCTAACTTCAACGG 59.078 50.000 0.00 0.00 40.15 4.44
3223 11080 2.268298 CGATGGTCTAACTTCAACGGG 58.732 52.381 0.00 0.00 0.00 5.28
3224 11081 2.629051 GATGGTCTAACTTCAACGGGG 58.371 52.381 0.00 0.00 0.00 5.73
3225 11082 1.426751 TGGTCTAACTTCAACGGGGT 58.573 50.000 0.00 0.00 0.00 4.95
3226 11083 2.607499 TGGTCTAACTTCAACGGGGTA 58.393 47.619 0.00 0.00 0.00 3.69
3227 11084 2.564062 TGGTCTAACTTCAACGGGGTAG 59.436 50.000 0.00 0.00 0.00 3.18
3228 11085 2.827921 GGTCTAACTTCAACGGGGTAGA 59.172 50.000 0.00 0.00 0.00 2.59
3229 11086 3.119209 GGTCTAACTTCAACGGGGTAGAG 60.119 52.174 0.00 0.00 0.00 2.43
3230 11087 3.509184 GTCTAACTTCAACGGGGTAGAGT 59.491 47.826 0.00 0.00 0.00 3.24
3231 11088 4.702131 GTCTAACTTCAACGGGGTAGAGTA 59.298 45.833 0.00 0.00 0.00 2.59
3232 11089 3.949842 AACTTCAACGGGGTAGAGTAC 57.050 47.619 0.00 0.00 0.00 2.73
3233 11090 2.880443 ACTTCAACGGGGTAGAGTACA 58.120 47.619 0.00 0.00 0.00 2.90
3234 11091 2.824341 ACTTCAACGGGGTAGAGTACAG 59.176 50.000 0.00 0.00 0.00 2.74
3235 11092 2.885135 TCAACGGGGTAGAGTACAGA 57.115 50.000 0.00 0.00 0.00 3.41
3236 11093 2.719739 TCAACGGGGTAGAGTACAGAG 58.280 52.381 0.00 0.00 0.00 3.35
3237 11094 1.134560 CAACGGGGTAGAGTACAGAGC 59.865 57.143 0.00 0.00 0.00 4.09
3238 11095 0.624785 ACGGGGTAGAGTACAGAGCT 59.375 55.000 0.00 0.00 0.00 4.09
3239 11096 1.842562 ACGGGGTAGAGTACAGAGCTA 59.157 52.381 0.00 0.00 0.00 3.32
3240 11097 2.158784 ACGGGGTAGAGTACAGAGCTAG 60.159 54.545 0.00 0.00 0.00 3.42
3241 11098 2.158784 CGGGGTAGAGTACAGAGCTAGT 60.159 54.545 0.00 0.00 0.00 2.57
3242 11099 3.215975 GGGGTAGAGTACAGAGCTAGTG 58.784 54.545 0.00 0.00 0.00 2.74
3243 11100 3.117963 GGGGTAGAGTACAGAGCTAGTGA 60.118 52.174 2.56 0.00 0.00 3.41
3244 11101 3.878699 GGGTAGAGTACAGAGCTAGTGAC 59.121 52.174 2.56 0.00 0.00 3.67
3245 11102 3.556775 GGTAGAGTACAGAGCTAGTGACG 59.443 52.174 2.56 0.00 0.00 4.35
3246 11103 3.337694 AGAGTACAGAGCTAGTGACGT 57.662 47.619 2.56 0.00 0.00 4.34
3247 11104 3.264104 AGAGTACAGAGCTAGTGACGTC 58.736 50.000 9.11 9.11 0.00 4.34
3248 11105 3.055675 AGAGTACAGAGCTAGTGACGTCT 60.056 47.826 17.92 0.00 0.00 4.18
3249 11106 3.677190 AGTACAGAGCTAGTGACGTCTT 58.323 45.455 17.92 7.72 0.00 3.01
3250 11107 4.829968 AGTACAGAGCTAGTGACGTCTTA 58.170 43.478 17.92 8.49 0.00 2.10
3251 11108 4.630940 AGTACAGAGCTAGTGACGTCTTAC 59.369 45.833 17.92 7.56 0.00 2.34
3253 11110 2.671888 CAGAGCTAGTGACGTCTTACGA 59.328 50.000 17.92 2.89 46.05 3.43
3254 11111 3.124806 CAGAGCTAGTGACGTCTTACGAA 59.875 47.826 17.92 1.02 46.05 3.85
3255 11112 3.750130 AGAGCTAGTGACGTCTTACGAAA 59.250 43.478 17.92 0.00 46.05 3.46
3256 11113 4.395542 AGAGCTAGTGACGTCTTACGAAAT 59.604 41.667 17.92 0.00 46.05 2.17
3257 11114 4.413087 AGCTAGTGACGTCTTACGAAATG 58.587 43.478 17.92 0.87 46.05 2.32
3258 11115 4.155462 AGCTAGTGACGTCTTACGAAATGA 59.845 41.667 17.92 0.00 46.05 2.57
3259 11116 4.262510 GCTAGTGACGTCTTACGAAATGAC 59.737 45.833 17.92 2.08 46.05 3.06
3266 11123 4.500703 GTCTTACGAAATGACGATGGTG 57.499 45.455 0.00 0.00 37.03 4.17
3267 11124 3.306166 GTCTTACGAAATGACGATGGTGG 59.694 47.826 0.00 0.00 37.03 4.61
3268 11125 1.647346 TACGAAATGACGATGGTGGC 58.353 50.000 0.00 0.00 37.03 5.01
3269 11126 1.348250 CGAAATGACGATGGTGGCG 59.652 57.895 0.00 0.00 35.09 5.69
3270 11127 1.358725 CGAAATGACGATGGTGGCGT 61.359 55.000 0.00 0.00 45.79 5.68
3271 11128 1.647346 GAAATGACGATGGTGGCGTA 58.353 50.000 0.00 0.00 42.77 4.42
3272 11129 1.326548 GAAATGACGATGGTGGCGTAC 59.673 52.381 0.00 0.00 42.77 3.67
3320 11177 6.642683 CGTAGGATCGACTTTTTACAACAT 57.357 37.500 0.00 0.00 0.00 2.71
3321 11178 6.693342 CGTAGGATCGACTTTTTACAACATC 58.307 40.000 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.161381 AGTAGGGAAAACACTACGTTGTATG 58.839 40.000 1.45 0.00 43.26 2.39
2 3 5.789643 AGTAGGGAAAACACTACGTTGTA 57.210 39.130 1.45 0.00 43.26 2.41
3 4 4.677673 AGTAGGGAAAACACTACGTTGT 57.322 40.909 0.00 0.00 43.26 3.32
4 5 7.662604 AATAAGTAGGGAAAACACTACGTTG 57.337 36.000 0.00 0.00 43.26 4.10
5 6 7.716560 ACAAATAAGTAGGGAAAACACTACGTT 59.283 33.333 0.00 0.00 43.26 3.99
6 7 7.172019 CACAAATAAGTAGGGAAAACACTACGT 59.828 37.037 0.00 0.00 43.26 3.57
7 8 7.515643 CACAAATAAGTAGGGAAAACACTACG 58.484 38.462 0.00 0.00 43.26 3.51
8 9 7.040961 TGCACAAATAAGTAGGGAAAACACTAC 60.041 37.037 0.00 0.00 39.81 2.73
9 10 6.999272 TGCACAAATAAGTAGGGAAAACACTA 59.001 34.615 0.00 0.00 0.00 2.74
10 11 5.830991 TGCACAAATAAGTAGGGAAAACACT 59.169 36.000 0.00 0.00 0.00 3.55
11 12 6.079424 TGCACAAATAAGTAGGGAAAACAC 57.921 37.500 0.00 0.00 0.00 3.32
12 13 6.909550 ATGCACAAATAAGTAGGGAAAACA 57.090 33.333 0.00 0.00 0.00 2.83
17 18 9.778741 CTCTTATAATGCACAAATAAGTAGGGA 57.221 33.333 17.50 4.85 35.58 4.20
18 19 9.003658 CCTCTTATAATGCACAAATAAGTAGGG 57.996 37.037 17.50 14.92 35.58 3.53
19 20 9.561069 ACCTCTTATAATGCACAAATAAGTAGG 57.439 33.333 22.19 22.19 37.03 3.18
23 24 9.831737 GCATACCTCTTATAATGCACAAATAAG 57.168 33.333 14.21 14.21 43.30 1.73
24 25 8.503196 CGCATACCTCTTATAATGCACAAATAA 58.497 33.333 6.91 0.00 43.86 1.40
25 26 7.659799 ACGCATACCTCTTATAATGCACAAATA 59.340 33.333 6.91 0.00 43.86 1.40
26 27 6.486657 ACGCATACCTCTTATAATGCACAAAT 59.513 34.615 6.91 0.00 43.86 2.32
27 28 5.820423 ACGCATACCTCTTATAATGCACAAA 59.180 36.000 6.91 0.00 43.86 2.83
28 29 5.364778 ACGCATACCTCTTATAATGCACAA 58.635 37.500 6.91 0.00 43.86 3.33
29 30 4.956085 ACGCATACCTCTTATAATGCACA 58.044 39.130 6.91 0.00 43.86 4.57
30 31 5.388475 CGAACGCATACCTCTTATAATGCAC 60.388 44.000 6.91 0.00 43.86 4.57
31 32 4.684242 CGAACGCATACCTCTTATAATGCA 59.316 41.667 6.91 0.00 43.86 3.96
32 33 4.434330 GCGAACGCATACCTCTTATAATGC 60.434 45.833 14.26 0.00 41.00 3.56
33 34 4.091509 GGCGAACGCATACCTCTTATAATG 59.908 45.833 20.16 0.00 44.11 1.90
34 35 4.243270 GGCGAACGCATACCTCTTATAAT 58.757 43.478 20.16 0.00 44.11 1.28
35 36 3.645884 GGCGAACGCATACCTCTTATAA 58.354 45.455 20.16 0.00 44.11 0.98
36 37 2.351060 CGGCGAACGCATACCTCTTATA 60.351 50.000 20.16 0.00 44.11 0.98
37 38 1.602165 CGGCGAACGCATACCTCTTAT 60.602 52.381 20.16 0.00 44.11 1.73
38 39 0.248743 CGGCGAACGCATACCTCTTA 60.249 55.000 20.16 0.00 44.11 2.10
39 40 1.518572 CGGCGAACGCATACCTCTT 60.519 57.895 20.16 0.00 44.11 2.85
40 41 2.104331 CGGCGAACGCATACCTCT 59.896 61.111 20.16 0.00 44.11 3.69
41 42 2.960129 CCGGCGAACGCATACCTC 60.960 66.667 20.16 1.60 44.11 3.85
53 54 2.124011 TAGTTAGTAATTCGCCGGCG 57.876 50.000 42.13 42.13 41.35 6.46
54 55 6.529463 TTAATTAGTTAGTAATTCGCCGGC 57.471 37.500 19.07 19.07 40.02 6.13
79 80 9.784531 CAGGGAAGTGAGATATTATTTGTACAT 57.215 33.333 0.00 0.00 0.00 2.29
80 81 8.768397 ACAGGGAAGTGAGATATTATTTGTACA 58.232 33.333 0.00 0.00 0.00 2.90
81 82 9.262358 GACAGGGAAGTGAGATATTATTTGTAC 57.738 37.037 0.00 0.00 0.00 2.90
82 83 8.141909 CGACAGGGAAGTGAGATATTATTTGTA 58.858 37.037 0.00 0.00 0.00 2.41
83 84 6.986817 CGACAGGGAAGTGAGATATTATTTGT 59.013 38.462 0.00 0.00 0.00 2.83
84 85 6.425114 CCGACAGGGAAGTGAGATATTATTTG 59.575 42.308 0.00 0.00 38.47 2.32
85 86 6.099845 ACCGACAGGGAAGTGAGATATTATTT 59.900 38.462 0.00 0.00 43.47 1.40
86 87 5.602978 ACCGACAGGGAAGTGAGATATTATT 59.397 40.000 0.00 0.00 43.47 1.40
90 91 2.959707 GACCGACAGGGAAGTGAGATAT 59.040 50.000 0.00 0.00 43.47 1.63
97 98 2.040178 GATATGGACCGACAGGGAAGT 58.960 52.381 0.00 0.00 43.47 3.01
98 99 2.297597 GAGATATGGACCGACAGGGAAG 59.702 54.545 0.00 0.00 43.47 3.46
100 101 1.216930 TGAGATATGGACCGACAGGGA 59.783 52.381 0.00 0.00 43.47 4.20
108 109 4.202609 ACCATGGGAATTGAGATATGGACC 60.203 45.833 18.09 0.00 38.67 4.46
128 129 5.420421 CCCCACAAATGTCATAAATACACCA 59.580 40.000 0.00 0.00 0.00 4.17
138 139 3.157087 GTCTTGTCCCCACAAATGTCAT 58.843 45.455 0.00 0.00 42.13 3.06
151 152 2.186076 GATGACATCGACGTCTTGTCC 58.814 52.381 29.84 19.29 45.23 4.02
156 157 0.803117 ACGTGATGACATCGACGTCT 59.197 50.000 26.28 14.22 40.37 4.18
206 211 9.577110 TCCGATCAATTATCAACCGTATAATAC 57.423 33.333 0.00 0.00 33.87 1.89
208 213 9.667107 AATCCGATCAATTATCAACCGTATAAT 57.333 29.630 0.00 0.00 33.87 1.28
209 214 8.931775 CAATCCGATCAATTATCAACCGTATAA 58.068 33.333 0.00 0.00 33.87 0.98
225 230 0.461870 CACGCCTTCCAATCCGATCA 60.462 55.000 0.00 0.00 0.00 2.92
271 276 4.917415 ACAAAAATACAATCACAAGCGCTC 59.083 37.500 12.06 0.00 0.00 5.03
275 280 5.405269 GTCCCACAAAAATACAATCACAAGC 59.595 40.000 0.00 0.00 0.00 4.01
285 290 4.067192 ACCTACGTGTCCCACAAAAATAC 58.933 43.478 0.00 0.00 33.40 1.89
330 335 9.308266 CACGTGTGTGTATATAGGCACTACGTA 62.308 44.444 25.07 0.00 46.57 3.57
380 385 9.499585 ACGTATATATACAGTGCGATTGATAAC 57.500 33.333 20.24 0.00 32.87 1.89
387 392 5.008415 GGGCTACGTATATATACAGTGCGAT 59.992 44.000 20.24 3.17 32.87 4.58
405 418 2.817834 TGCAATCGCGTGGGCTAC 60.818 61.111 5.77 0.00 42.97 3.58
415 428 1.702886 AGAGACGAACTGTGCAATCG 58.297 50.000 9.92 9.92 42.05 3.34
436 671 2.586648 ATCCCCTTTCTGGTGTGAAC 57.413 50.000 0.00 0.00 0.00 3.18
444 679 3.225940 GCCTTTGGATATCCCCTTTCTG 58.774 50.000 19.34 2.77 34.29 3.02
445 680 2.858768 TGCCTTTGGATATCCCCTTTCT 59.141 45.455 19.34 0.00 34.29 2.52
447 682 3.051880 ACATGCCTTTGGATATCCCCTTT 60.052 43.478 19.34 0.00 34.29 3.11
448 683 2.519691 ACATGCCTTTGGATATCCCCTT 59.480 45.455 19.34 0.00 34.29 3.95
451 686 5.324409 TCAATACATGCCTTTGGATATCCC 58.676 41.667 19.34 3.69 34.29 3.85
453 688 7.458409 ACATCAATACATGCCTTTGGATATC 57.542 36.000 0.00 0.00 0.00 1.63
457 692 7.517320 ACTATACATCAATACATGCCTTTGGA 58.483 34.615 0.00 0.00 0.00 3.53
459 694 9.494271 AGTACTATACATCAATACATGCCTTTG 57.506 33.333 0.00 0.00 0.00 2.77
474 709 9.645059 CAGCAATGCAAGTATAGTACTATACAT 57.355 33.333 36.98 29.25 46.33 2.29
476 711 8.088981 ACCAGCAATGCAAGTATAGTACTATAC 58.911 37.037 32.50 32.50 45.02 1.47
481 716 5.175126 CGTACCAGCAATGCAAGTATAGTAC 59.825 44.000 8.35 7.08 0.00 2.73
484 719 4.368315 TCGTACCAGCAATGCAAGTATAG 58.632 43.478 8.35 7.26 0.00 1.31
485 720 4.394439 TCGTACCAGCAATGCAAGTATA 57.606 40.909 8.35 0.00 0.00 1.47
486 721 3.260475 TCGTACCAGCAATGCAAGTAT 57.740 42.857 8.35 0.00 0.00 2.12
487 722 2.753055 TCGTACCAGCAATGCAAGTA 57.247 45.000 8.35 5.61 0.00 2.24
488 723 2.009774 GATCGTACCAGCAATGCAAGT 58.990 47.619 8.35 6.70 0.00 3.16
490 725 2.009051 CAGATCGTACCAGCAATGCAA 58.991 47.619 8.35 0.00 0.00 4.08
491 726 1.066215 ACAGATCGTACCAGCAATGCA 60.066 47.619 8.35 0.00 0.00 3.96
496 731 1.616374 TCAACACAGATCGTACCAGCA 59.384 47.619 0.00 0.00 0.00 4.41
497 732 1.993370 GTCAACACAGATCGTACCAGC 59.007 52.381 0.00 0.00 0.00 4.85
498 733 2.607187 GGTCAACACAGATCGTACCAG 58.393 52.381 0.00 0.00 0.00 4.00
499 734 1.068125 CGGTCAACACAGATCGTACCA 60.068 52.381 0.00 0.00 37.36 3.25
505 740 2.223377 GGTTTCACGGTCAACACAGATC 59.777 50.000 0.00 0.00 0.00 2.75
508 743 0.303493 CGGTTTCACGGTCAACACAG 59.697 55.000 0.00 0.00 0.00 3.66
532 2983 1.050767 CCGAGTGAGAAAACGACGAC 58.949 55.000 0.00 0.00 0.00 4.34
533 2984 0.664761 ACCGAGTGAGAAAACGACGA 59.335 50.000 0.00 0.00 0.00 4.20
536 2987 1.679680 AGTGACCGAGTGAGAAAACGA 59.320 47.619 0.00 0.00 0.00 3.85
537 2988 1.787155 CAGTGACCGAGTGAGAAAACG 59.213 52.381 0.00 0.00 0.00 3.60
550 3001 2.513026 ATCCACGAGCAGCAGTGACC 62.513 60.000 19.06 0.00 40.56 4.02
555 3006 2.202987 GGGATCCACGAGCAGCAG 60.203 66.667 15.23 0.00 0.00 4.24
557 3008 1.522580 GAAGGGATCCACGAGCAGC 60.523 63.158 15.23 0.00 0.00 5.25
582 3033 3.257561 GATGAGATGCACGCGCGT 61.258 61.111 32.73 32.73 42.97 6.01
583 3034 2.801624 TTGATGAGATGCACGCGCG 61.802 57.895 30.96 30.96 42.97 6.86
584 3035 1.297158 GTTGATGAGATGCACGCGC 60.297 57.895 5.73 0.00 39.24 6.86
586 3037 1.026182 TGGGTTGATGAGATGCACGC 61.026 55.000 0.00 0.00 0.00 5.34
610 3069 0.039437 ACGAGAGTGAAATGCGACGT 60.039 50.000 0.00 0.00 46.97 4.34
634 3098 0.657312 ACATAATGTGATGCCACGCG 59.343 50.000 3.53 3.53 46.06 6.01
636 3100 4.095410 ACAAACATAATGTGATGCCACG 57.905 40.909 0.00 0.00 46.06 4.94
646 3110 4.782156 TCTCACGTTGCACAAACATAATG 58.218 39.130 0.00 0.00 38.84 1.90
649 3133 2.223144 GCTCTCACGTTGCACAAACATA 59.777 45.455 0.00 0.00 38.84 2.29
652 3136 0.654472 CGCTCTCACGTTGCACAAAC 60.654 55.000 0.00 0.00 35.25 2.93
666 3150 0.713883 CGTGTATGTTTTCGCGCTCT 59.286 50.000 5.56 0.00 0.00 4.09
667 3151 0.437295 ACGTGTATGTTTTCGCGCTC 59.563 50.000 5.56 0.00 40.50 5.03
668 3152 0.863144 AACGTGTATGTTTTCGCGCT 59.137 45.000 5.56 0.00 40.50 5.92
669 3153 1.635660 GAAACGTGTATGTTTTCGCGC 59.364 47.619 0.00 0.00 41.89 6.86
675 3179 2.545106 GTCCACCGAAACGTGTATGTTT 59.455 45.455 2.06 2.06 44.36 2.83
678 3182 1.073177 GGTCCACCGAAACGTGTATG 58.927 55.000 0.00 0.00 31.47 2.39
680 3184 0.314935 GAGGTCCACCGAAACGTGTA 59.685 55.000 0.00 0.00 42.08 2.90
689 3193 0.037232 GGAAAGTCAGAGGTCCACCG 60.037 60.000 0.00 0.00 42.08 4.94
693 3197 0.037232 CGGTGGAAAGTCAGAGGTCC 60.037 60.000 0.00 0.00 0.00 4.46
698 3202 0.468226 AGCAACGGTGGAAAGTCAGA 59.532 50.000 0.90 0.00 0.00 3.27
699 3203 0.868406 GAGCAACGGTGGAAAGTCAG 59.132 55.000 0.90 0.00 0.00 3.51
700 3204 0.468226 AGAGCAACGGTGGAAAGTCA 59.532 50.000 0.90 0.00 0.00 3.41
701 3205 2.067013 GTAGAGCAACGGTGGAAAGTC 58.933 52.381 0.90 0.00 0.00 3.01
702 3206 1.692519 AGTAGAGCAACGGTGGAAAGT 59.307 47.619 0.90 0.00 0.00 2.66
703 3207 2.338500 GAGTAGAGCAACGGTGGAAAG 58.662 52.381 0.90 0.00 0.00 2.62
704 3208 1.001633 GGAGTAGAGCAACGGTGGAAA 59.998 52.381 0.90 0.00 0.00 3.13
705 3209 0.606604 GGAGTAGAGCAACGGTGGAA 59.393 55.000 0.90 0.00 0.00 3.53
706 3210 0.251653 AGGAGTAGAGCAACGGTGGA 60.252 55.000 0.90 0.00 0.00 4.02
707 3211 0.173708 GAGGAGTAGAGCAACGGTGG 59.826 60.000 0.90 0.00 0.00 4.61
709 3213 1.465794 GAGAGGAGTAGAGCAACGGT 58.534 55.000 0.00 0.00 0.00 4.83
710 3214 0.741915 GGAGAGGAGTAGAGCAACGG 59.258 60.000 0.00 0.00 0.00 4.44
721 3243 4.217510 AGATGAAGATGAGTGGAGAGGAG 58.782 47.826 0.00 0.00 0.00 3.69
812 3342 3.191539 GCCAGCGAGAAAGCGAGG 61.192 66.667 0.00 0.00 43.00 4.63
813 3343 2.433145 TGCCAGCGAGAAAGCGAG 60.433 61.111 0.00 0.00 43.00 5.03
814 3344 2.433145 CTGCCAGCGAGAAAGCGA 60.433 61.111 0.00 0.00 43.00 4.93
815 3345 3.494336 CCTGCCAGCGAGAAAGCG 61.494 66.667 0.00 0.00 43.00 4.68
816 3346 2.359230 ACCTGCCAGCGAGAAAGC 60.359 61.111 0.00 0.00 37.41 3.51
817 3347 1.743252 GGACCTGCCAGCGAGAAAG 60.743 63.158 0.00 0.00 36.34 2.62
818 3348 2.347490 GGACCTGCCAGCGAGAAA 59.653 61.111 0.00 0.00 36.34 2.52
819 3349 4.069232 CGGACCTGCCAGCGAGAA 62.069 66.667 0.00 0.00 35.94 2.87
821 3351 4.803426 GACGGACCTGCCAGCGAG 62.803 72.222 0.00 0.00 35.94 5.03
823 3353 4.379243 AAGACGGACCTGCCAGCG 62.379 66.667 0.00 0.00 35.94 5.18
824 3354 2.435059 GAAGACGGACCTGCCAGC 60.435 66.667 0.00 0.00 35.94 4.85
856 3398 2.926778 ATACAGCAGCAGAGGATTCC 57.073 50.000 0.00 0.00 0.00 3.01
857 3399 7.360776 GCTTATTTATACAGCAGCAGAGGATTC 60.361 40.741 0.00 0.00 33.45 2.52
858 3400 6.429385 GCTTATTTATACAGCAGCAGAGGATT 59.571 38.462 0.00 0.00 33.45 3.01
859 3401 5.936956 GCTTATTTATACAGCAGCAGAGGAT 59.063 40.000 0.00 0.00 33.45 3.24
863 3405 5.917462 TGAGCTTATTTATACAGCAGCAGA 58.083 37.500 0.00 0.00 35.88 4.26
866 3408 6.610741 AGTTGAGCTTATTTATACAGCAGC 57.389 37.500 0.00 0.00 35.88 5.25
867 3409 7.710907 TGGTAGTTGAGCTTATTTATACAGCAG 59.289 37.037 0.00 0.00 35.88 4.24
868 3410 7.561251 TGGTAGTTGAGCTTATTTATACAGCA 58.439 34.615 0.00 0.00 35.88 4.41
886 3437 0.984995 GGAGGTTGGAGCTGGTAGTT 59.015 55.000 0.00 0.00 0.00 2.24
887 3438 0.910088 GGGAGGTTGGAGCTGGTAGT 60.910 60.000 0.00 0.00 0.00 2.73
889 3440 0.617820 GAGGGAGGTTGGAGCTGGTA 60.618 60.000 0.00 0.00 0.00 3.25
890 3441 1.920835 GAGGGAGGTTGGAGCTGGT 60.921 63.158 0.00 0.00 0.00 4.00
893 3444 2.285743 GGGAGGGAGGTTGGAGCT 60.286 66.667 0.00 0.00 0.00 4.09
894 3445 2.285743 AGGGAGGGAGGTTGGAGC 60.286 66.667 0.00 0.00 0.00 4.70
895 3446 1.690985 GGAGGGAGGGAGGTTGGAG 60.691 68.421 0.00 0.00 0.00 3.86
896 3447 2.182858 GAGGAGGGAGGGAGGTTGGA 62.183 65.000 0.00 0.00 0.00 3.53
900 3451 0.331036 ATAGGAGGAGGGAGGGAGGT 60.331 60.000 0.00 0.00 0.00 3.85
902 3453 0.411848 GGATAGGAGGAGGGAGGGAG 59.588 65.000 0.00 0.00 0.00 4.30
939 3495 2.583520 GAGCAGGTGAGCTGAGGG 59.416 66.667 16.83 0.00 46.75 4.30
962 3538 4.073052 CTCCCGATCGAGGAGGAG 57.927 66.667 30.06 25.24 46.14 3.69
970 3546 1.871039 GAGTTCTCTCTCTCCCGATCG 59.129 57.143 8.51 8.51 37.68 3.69
972 3548 3.138283 AGATGAGTTCTCTCTCTCCCGAT 59.862 47.826 1.53 0.00 40.98 4.18
973 3549 2.507886 AGATGAGTTCTCTCTCTCCCGA 59.492 50.000 1.53 0.00 40.98 5.14
974 3550 2.930950 AGATGAGTTCTCTCTCTCCCG 58.069 52.381 1.53 0.00 40.98 5.14
975 3551 5.654650 TGTTTAGATGAGTTCTCTCTCTCCC 59.345 44.000 1.53 0.00 40.98 4.30
976 3552 6.767524 TGTTTAGATGAGTTCTCTCTCTCC 57.232 41.667 1.53 0.00 40.98 3.71
978 3554 8.359875 TCATTGTTTAGATGAGTTCTCTCTCT 57.640 34.615 1.53 6.18 40.98 3.10
985 3561 7.369803 TGCTCTTCATTGTTTAGATGAGTTC 57.630 36.000 0.00 0.00 37.96 3.01
1149 3815 4.082523 CGGAGGTGGTGTGCGGAT 62.083 66.667 0.00 0.00 0.00 4.18
1182 3851 4.208686 GACGGCGGCGAGGAAGAT 62.209 66.667 38.93 14.02 0.00 2.40
1221 3890 0.322456 TTGGGGGCGAATCAAGAGTG 60.322 55.000 0.00 0.00 0.00 3.51
1225 3964 0.532115 CCTTTTGGGGGCGAATCAAG 59.468 55.000 0.00 0.00 35.46 3.02
1249 4074 3.740590 CTGCGTGAGTTGAGCAAATTAG 58.259 45.455 0.00 0.00 40.63 1.73
1251 4076 1.335324 GCTGCGTGAGTTGAGCAAATT 60.335 47.619 0.00 0.00 40.63 1.82
1255 4080 1.957695 CAGCTGCGTGAGTTGAGCA 60.958 57.895 0.00 0.00 34.91 4.26
1258 4083 1.300931 GGACAGCTGCGTGAGTTGA 60.301 57.895 15.27 0.00 36.43 3.18
1276 4110 0.324943 AATCAGGTGTCTGTTCCCCG 59.675 55.000 0.00 0.00 41.59 5.73
1279 4113 3.751698 GTGGTTAATCAGGTGTCTGTTCC 59.248 47.826 0.00 0.00 41.59 3.62
1280 4114 4.213482 GTGTGGTTAATCAGGTGTCTGTTC 59.787 45.833 0.00 0.00 41.59 3.18
1281 4115 4.134563 GTGTGGTTAATCAGGTGTCTGTT 58.865 43.478 0.00 0.00 41.59 3.16
1285 4119 4.273148 AGAGTGTGGTTAATCAGGTGTC 57.727 45.455 0.00 0.00 0.00 3.67
1289 4123 4.081862 TCGGTAAGAGTGTGGTTAATCAGG 60.082 45.833 0.00 0.00 0.00 3.86
1305 4139 2.852413 CTGCGTGTTACTGATCGGTAAG 59.148 50.000 24.40 15.31 33.12 2.34
1313 4147 5.413523 TGTATTCTCTACTGCGTGTTACTGA 59.586 40.000 0.00 0.00 0.00 3.41
1383 4293 0.250901 GCTCCCCATCACACACTTGT 60.251 55.000 0.00 0.00 35.84 3.16
1385 4295 0.250901 GTGCTCCCCATCACACACTT 60.251 55.000 0.00 0.00 33.63 3.16
1386 4296 1.376466 GTGCTCCCCATCACACACT 59.624 57.895 0.00 0.00 33.63 3.55
1397 4359 0.321653 CCACACAAGTAGGTGCTCCC 60.322 60.000 0.00 0.00 42.55 4.30
1432 4477 3.186409 CACCAACCAAGTTGAGACATACG 59.814 47.826 3.87 0.00 45.28 3.06
1456 4501 2.190981 GTGAACGTCGTCACTTTGTCT 58.809 47.619 12.17 0.00 43.82 3.41
1458 4503 1.999048 TGTGAACGTCGTCACTTTGT 58.001 45.000 18.49 0.00 46.70 2.83
1460 4505 2.883574 TCTTGTGAACGTCGTCACTTT 58.116 42.857 18.49 0.00 46.70 2.66
1527 4596 6.743773 GCTGATCAATTTCTATGGCTCCTACT 60.744 42.308 0.00 0.00 0.00 2.57
1529 4598 5.555017 GCTGATCAATTTCTATGGCTCCTA 58.445 41.667 0.00 0.00 0.00 2.94
1530 4599 4.396522 GCTGATCAATTTCTATGGCTCCT 58.603 43.478 0.00 0.00 0.00 3.69
1531 4600 3.188048 CGCTGATCAATTTCTATGGCTCC 59.812 47.826 0.00 0.00 0.00 4.70
1533 4602 3.813443 ACGCTGATCAATTTCTATGGCT 58.187 40.909 0.00 0.00 0.00 4.75
1544 4613 3.086282 TGAGTGGTACTACGCTGATCAA 58.914 45.455 13.80 0.00 0.00 2.57
1545 4614 2.422479 GTGAGTGGTACTACGCTGATCA 59.578 50.000 13.80 4.64 0.00 2.92
1552 4621 4.082408 TCCAAATGAGTGAGTGGTACTACG 60.082 45.833 3.48 0.00 32.68 3.51
1615 4737 9.168451 ACCGACCAAACATTTTAATTTTTCTTT 57.832 25.926 0.00 0.00 0.00 2.52
1623 4745 6.015010 TGGATTCACCGACCAAACATTTTAAT 60.015 34.615 0.00 0.00 42.61 1.40
1640 4769 5.930837 TTAATTGTTGGGGATGGATTCAC 57.069 39.130 0.00 0.00 0.00 3.18
1642 4771 5.840693 AGGATTAATTGTTGGGGATGGATTC 59.159 40.000 0.00 0.00 0.00 2.52
1795 5000 4.996758 GCTGGTAGTAGCTAGTAGTAGTCC 59.003 50.000 8.61 6.85 40.52 3.85
1796 5001 5.609423 TGCTGGTAGTAGCTAGTAGTAGTC 58.391 45.833 8.61 7.26 44.01 2.59
1958 5904 4.416738 GAGAGGGCGGCCTGCTTT 62.417 66.667 38.01 17.78 45.43 3.51
2060 6042 4.954118 AGGGTGCCGTCCTGGTGA 62.954 66.667 0.00 0.00 41.21 4.02
2072 6054 3.314331 AGAGCCACGTCCAGGGTG 61.314 66.667 0.00 0.00 36.91 4.61
2075 6060 4.767255 GCCAGAGCCACGTCCAGG 62.767 72.222 0.00 0.00 0.00 4.45
2183 6168 1.178276 AGAAGATCTTGTCGCCGACT 58.822 50.000 19.12 0.00 33.15 4.18
2207 6192 3.329542 GAGCGCCTGGGAATGGACA 62.330 63.158 2.29 0.00 0.00 4.02
2313 6304 9.517868 AAGAGAGAAAGAAAGAAATCATGTCAT 57.482 29.630 0.00 0.00 0.00 3.06
2323 6314 9.014297 ACAACAAAGAAAGAGAGAAAGAAAGAA 57.986 29.630 0.00 0.00 0.00 2.52
2394 6435 4.474530 CTCACTCACGAGCAGAGC 57.525 61.111 0.00 0.00 36.58 4.09
2457 6505 4.221703 TCACATCTTCAGAAAGGAGGAGAC 59.778 45.833 0.00 0.00 33.03 3.36
2490 6540 3.837355 AGAAACCCAGCATTCTGAAAGT 58.163 40.909 0.00 0.00 42.95 2.66
2502 6552 5.644206 GCCTTCTTAGTAGAAAGAAACCCAG 59.356 44.000 1.20 0.00 43.13 4.45
2535 6585 2.621445 CCTAATGCCCCCACACCCA 61.621 63.158 0.00 0.00 0.00 4.51
2536 6586 2.278738 CCTAATGCCCCCACACCC 59.721 66.667 0.00 0.00 0.00 4.61
2537 6587 2.442087 GCCTAATGCCCCCACACC 60.442 66.667 0.00 0.00 0.00 4.16
2538 6588 1.453928 GAGCCTAATGCCCCCACAC 60.454 63.158 0.00 0.00 42.71 3.82
2541 6591 1.214305 AACAGAGCCTAATGCCCCCA 61.214 55.000 0.00 0.00 42.71 4.96
2545 6595 1.839424 ACCAAACAGAGCCTAATGCC 58.161 50.000 0.00 0.00 42.71 4.40
2571 6621 3.240069 CAGCGGCTTTTTCAGAATCTTG 58.760 45.455 0.00 0.00 0.00 3.02
2611 6661 0.802494 CCGTGATAGCGGCAGTTTTT 59.198 50.000 1.45 0.00 45.47 1.94
2658 6720 2.679092 CCCAAGCCAGGCAGATCA 59.321 61.111 15.80 0.00 0.00 2.92
2666 6728 2.409870 GCACGATTCCCCAAGCCAG 61.410 63.158 0.00 0.00 0.00 4.85
2682 6744 1.806461 GATAGCCCCGTGATCTCGCA 61.806 60.000 11.58 0.00 0.00 5.10
2691 6753 3.161450 ACGCCATGATAGCCCCGT 61.161 61.111 0.00 0.00 0.00 5.28
2725 6787 2.578664 ATGCAGATCGCGTGTCCA 59.421 55.556 5.77 1.07 46.97 4.02
2731 6793 0.179156 AAAAAGCCATGCAGATCGCG 60.179 50.000 0.00 0.00 46.97 5.87
2760 6822 0.035152 ACAGCCATCGCTTCCATCAA 60.035 50.000 0.00 0.00 45.55 2.57
2762 6824 1.953559 TAACAGCCATCGCTTCCATC 58.046 50.000 0.00 0.00 45.55 3.51
2764 6826 2.434336 AGTATAACAGCCATCGCTTCCA 59.566 45.455 0.00 0.00 45.55 3.53
2765 6827 3.113260 AGTATAACAGCCATCGCTTCC 57.887 47.619 0.00 0.00 45.55 3.46
2766 6828 4.918583 GTCTAGTATAACAGCCATCGCTTC 59.081 45.833 0.00 0.00 45.55 3.86
2770 6832 6.346919 GCAAATGTCTAGTATAACAGCCATCG 60.347 42.308 0.00 0.00 0.00 3.84
2772 6834 6.356556 TGCAAATGTCTAGTATAACAGCCAT 58.643 36.000 0.00 0.00 0.00 4.40
2773 6835 5.739959 TGCAAATGTCTAGTATAACAGCCA 58.260 37.500 0.00 0.00 0.00 4.75
2775 6837 6.487103 GGTTGCAAATGTCTAGTATAACAGC 58.513 40.000 0.00 0.00 0.00 4.40
2776 6838 6.312918 ACGGTTGCAAATGTCTAGTATAACAG 59.687 38.462 0.00 0.00 0.00 3.16
2778 6840 6.091713 ACACGGTTGCAAATGTCTAGTATAAC 59.908 38.462 0.00 0.00 0.00 1.89
2780 6842 5.726397 ACACGGTTGCAAATGTCTAGTATA 58.274 37.500 0.00 0.00 0.00 1.47
2782 6844 3.997762 ACACGGTTGCAAATGTCTAGTA 58.002 40.909 0.00 0.00 0.00 1.82
2783 6845 2.846193 ACACGGTTGCAAATGTCTAGT 58.154 42.857 0.00 0.00 0.00 2.57
2784 6846 3.181534 CGTACACGGTTGCAAATGTCTAG 60.182 47.826 13.78 5.52 35.37 2.43
2785 6847 2.732500 CGTACACGGTTGCAAATGTCTA 59.267 45.455 13.78 0.48 35.37 2.59
2786 6848 1.529438 CGTACACGGTTGCAAATGTCT 59.471 47.619 13.78 1.33 35.37 3.41
2787 6849 1.262151 ACGTACACGGTTGCAAATGTC 59.738 47.619 13.78 7.10 44.95 3.06
2788 6850 1.003331 CACGTACACGGTTGCAAATGT 60.003 47.619 14.55 14.55 44.95 2.71
2789 6851 1.661743 CCACGTACACGGTTGCAAATG 60.662 52.381 0.00 2.61 44.95 2.32
2790 6852 0.589223 CCACGTACACGGTTGCAAAT 59.411 50.000 0.00 0.00 44.95 2.32
2792 6854 1.152989 GACCACGTACACGGTTGCAA 61.153 55.000 6.72 0.00 44.95 4.08
2793 6855 1.592131 GACCACGTACACGGTTGCA 60.592 57.895 6.72 0.00 44.95 4.08
2794 6856 1.300388 AGACCACGTACACGGTTGC 60.300 57.895 6.72 0.00 44.95 4.17
2795 6857 0.942410 CCAGACCACGTACACGGTTG 60.942 60.000 6.72 5.62 44.95 3.77
2796 6858 1.108727 TCCAGACCACGTACACGGTT 61.109 55.000 6.72 0.00 44.95 4.44
2797 6859 1.529010 TCCAGACCACGTACACGGT 60.529 57.895 6.72 2.88 44.95 4.83
2822 10666 0.035152 CCATGTACCTTGCTCAGCCA 60.035 55.000 0.00 0.00 0.00 4.75
2868 10712 0.756294 TACTACCATGGCCATCCACG 59.244 55.000 17.61 4.26 46.92 4.94
2879 10723 3.574396 CGATCTGGACCATGTACTACCAT 59.426 47.826 0.00 0.00 0.00 3.55
2904 10748 7.329226 CCAAATTAAGTTTAAGTGCATCCACAG 59.671 37.037 0.00 0.00 44.53 3.66
2905 10749 7.151308 CCAAATTAAGTTTAAGTGCATCCACA 58.849 34.615 0.00 0.00 44.53 4.17
2913 10757 7.546667 AGATGCATGCCAAATTAAGTTTAAGTG 59.453 33.333 16.68 0.00 0.00 3.16
2914 10758 7.614494 AGATGCATGCCAAATTAAGTTTAAGT 58.386 30.769 16.68 0.00 0.00 2.24
2916 10760 7.839907 AGAGATGCATGCCAAATTAAGTTTAA 58.160 30.769 16.68 0.00 0.00 1.52
2918 10762 6.154021 AGAGAGATGCATGCCAAATTAAGTTT 59.846 34.615 16.68 0.00 0.00 2.66
2919 10763 5.655532 AGAGAGATGCATGCCAAATTAAGTT 59.344 36.000 16.68 0.00 0.00 2.66
2937 10794 1.971357 GTGGACCCAGAACAAGAGAGA 59.029 52.381 0.00 0.00 0.00 3.10
2941 10798 1.474320 CGTTGTGGACCCAGAACAAGA 60.474 52.381 23.18 0.00 46.41 3.02
2979 10836 0.320073 CGTCTTTCTGGTGGCCGTAA 60.320 55.000 0.00 0.00 0.00 3.18
2995 10852 2.640346 AAACAAAACCCACACACGTC 57.360 45.000 0.00 0.00 0.00 4.34
3001 10858 2.763448 CTCCTGGAAAACAAAACCCACA 59.237 45.455 0.00 0.00 0.00 4.17
3015 10872 3.507411 AGCTACAGTGTTTACTCCTGGA 58.493 45.455 0.00 0.00 34.07 3.86
3019 10876 5.642686 CACTAGAGCTACAGTGTTTACTCC 58.357 45.833 15.81 0.00 37.87 3.85
3037 10894 4.162320 TGAGCCCAAGAATAGGAACACTAG 59.838 45.833 0.00 0.00 34.56 2.57
3038 10895 4.101114 TGAGCCCAAGAATAGGAACACTA 58.899 43.478 0.00 0.00 35.80 2.74
3039 10896 2.912956 TGAGCCCAAGAATAGGAACACT 59.087 45.455 0.00 0.00 0.00 3.55
3040 10897 3.274288 CTGAGCCCAAGAATAGGAACAC 58.726 50.000 0.00 0.00 0.00 3.32
3041 10898 2.239654 CCTGAGCCCAAGAATAGGAACA 59.760 50.000 0.00 0.00 0.00 3.18
3042 10899 2.422093 CCCTGAGCCCAAGAATAGGAAC 60.422 54.545 0.00 0.00 0.00 3.62
3043 10900 1.846439 CCCTGAGCCCAAGAATAGGAA 59.154 52.381 0.00 0.00 0.00 3.36
3044 10901 1.009552 TCCCTGAGCCCAAGAATAGGA 59.990 52.381 0.00 0.00 0.00 2.94
3045 10902 1.419387 CTCCCTGAGCCCAAGAATAGG 59.581 57.143 0.00 0.00 0.00 2.57
3046 10903 2.122768 ACTCCCTGAGCCCAAGAATAG 58.877 52.381 0.00 0.00 32.04 1.73
3047 10904 2.270434 ACTCCCTGAGCCCAAGAATA 57.730 50.000 0.00 0.00 32.04 1.75
3048 10905 2.270434 TACTCCCTGAGCCCAAGAAT 57.730 50.000 0.00 0.00 32.04 2.40
3049 10906 2.038863 TTACTCCCTGAGCCCAAGAA 57.961 50.000 0.00 0.00 32.04 2.52
3050 10907 2.038863 TTTACTCCCTGAGCCCAAGA 57.961 50.000 0.00 0.00 32.04 3.02
3051 10908 3.741388 CGTATTTACTCCCTGAGCCCAAG 60.741 52.174 0.00 0.00 32.04 3.61
3052 10909 2.169769 CGTATTTACTCCCTGAGCCCAA 59.830 50.000 0.00 0.00 32.04 4.12
3053 10910 1.760613 CGTATTTACTCCCTGAGCCCA 59.239 52.381 0.00 0.00 32.04 5.36
3054 10911 1.070289 CCGTATTTACTCCCTGAGCCC 59.930 57.143 0.00 0.00 32.04 5.19
3055 10912 1.761198 ACCGTATTTACTCCCTGAGCC 59.239 52.381 0.00 0.00 32.04 4.70
3056 10913 2.483188 CCACCGTATTTACTCCCTGAGC 60.483 54.545 0.00 0.00 32.04 4.26
3057 10914 2.764572 ACCACCGTATTTACTCCCTGAG 59.235 50.000 0.00 0.00 35.52 3.35
3058 10915 2.823959 ACCACCGTATTTACTCCCTGA 58.176 47.619 0.00 0.00 0.00 3.86
3059 10916 3.528532 GAACCACCGTATTTACTCCCTG 58.471 50.000 0.00 0.00 0.00 4.45
3060 10917 2.502947 GGAACCACCGTATTTACTCCCT 59.497 50.000 0.00 0.00 0.00 4.20
3061 10918 2.502947 AGGAACCACCGTATTTACTCCC 59.497 50.000 0.00 0.00 44.74 4.30
3062 10919 3.900966 AGGAACCACCGTATTTACTCC 57.099 47.619 0.00 0.00 44.74 3.85
3063 10920 6.259387 CCAAATAGGAACCACCGTATTTACTC 59.741 42.308 0.00 0.00 44.74 2.59
3064 10921 6.117488 CCAAATAGGAACCACCGTATTTACT 58.883 40.000 0.00 0.00 44.74 2.24
3065 10922 5.220912 GCCAAATAGGAACCACCGTATTTAC 60.221 44.000 0.00 0.00 44.74 2.01
3066 10923 4.883006 GCCAAATAGGAACCACCGTATTTA 59.117 41.667 0.00 0.00 44.74 1.40
3067 10924 3.697542 GCCAAATAGGAACCACCGTATTT 59.302 43.478 0.00 0.00 44.74 1.40
3068 10925 3.284617 GCCAAATAGGAACCACCGTATT 58.715 45.455 0.00 0.00 44.74 1.89
3069 10926 2.743838 CGCCAAATAGGAACCACCGTAT 60.744 50.000 0.00 0.00 44.74 3.06
3070 10927 1.405797 CGCCAAATAGGAACCACCGTA 60.406 52.381 0.00 0.00 44.74 4.02
3071 10928 0.675522 CGCCAAATAGGAACCACCGT 60.676 55.000 0.00 0.00 44.74 4.83
3072 10929 1.373590 CCGCCAAATAGGAACCACCG 61.374 60.000 0.00 0.00 44.74 4.94
3073 10930 0.034863 TCCGCCAAATAGGAACCACC 60.035 55.000 0.00 0.00 41.22 4.61
3074 10931 2.052782 ATCCGCCAAATAGGAACCAC 57.947 50.000 0.00 0.00 40.32 4.16
3075 10932 2.818751 AATCCGCCAAATAGGAACCA 57.181 45.000 0.00 0.00 40.32 3.67
3076 10933 4.465632 AAAAATCCGCCAAATAGGAACC 57.534 40.909 0.00 0.00 40.32 3.62
3097 10954 6.819284 AGCATGAAAGATTTCCTGTCAAAAA 58.181 32.000 0.00 0.00 42.16 1.94
3098 10955 6.409524 AGCATGAAAGATTTCCTGTCAAAA 57.590 33.333 0.00 0.00 42.16 2.44
3099 10956 6.349611 GCTAGCATGAAAGATTTCCTGTCAAA 60.350 38.462 10.63 0.00 42.16 2.69
3100 10957 5.124457 GCTAGCATGAAAGATTTCCTGTCAA 59.876 40.000 10.63 0.00 42.16 3.18
3101 10958 4.637534 GCTAGCATGAAAGATTTCCTGTCA 59.362 41.667 10.63 0.00 42.99 3.58
3102 10959 4.880696 AGCTAGCATGAAAGATTTCCTGTC 59.119 41.667 18.83 5.30 35.89 3.51
3103 10960 4.853007 AGCTAGCATGAAAGATTTCCTGT 58.147 39.130 18.83 0.00 35.89 4.00
3104 10961 8.789825 ATATAGCTAGCATGAAAGATTTCCTG 57.210 34.615 18.83 4.82 36.36 3.86
3128 10985 9.120538 ACGATGTAGGCATTATTTGAAGTTAAT 57.879 29.630 0.00 0.00 35.07 1.40
3129 10986 8.500753 ACGATGTAGGCATTATTTGAAGTTAA 57.499 30.769 0.00 0.00 35.07 2.01
3130 10987 7.042992 CGACGATGTAGGCATTATTTGAAGTTA 60.043 37.037 0.00 0.00 35.07 2.24
3131 10988 6.238103 CGACGATGTAGGCATTATTTGAAGTT 60.238 38.462 0.00 0.00 35.07 2.66
3132 10989 5.234329 CGACGATGTAGGCATTATTTGAAGT 59.766 40.000 0.00 0.00 35.07 3.01
3133 10990 5.333339 CCGACGATGTAGGCATTATTTGAAG 60.333 44.000 0.00 0.00 35.07 3.02
3134 10991 4.509970 CCGACGATGTAGGCATTATTTGAA 59.490 41.667 0.00 0.00 35.07 2.69
3135 10992 4.055360 CCGACGATGTAGGCATTATTTGA 58.945 43.478 0.00 0.00 35.07 2.69
3136 10993 3.807622 ACCGACGATGTAGGCATTATTTG 59.192 43.478 0.00 0.00 35.07 2.32
3137 10994 4.067972 ACCGACGATGTAGGCATTATTT 57.932 40.909 0.00 0.00 35.07 1.40
3138 10995 3.746045 ACCGACGATGTAGGCATTATT 57.254 42.857 0.00 0.00 35.07 1.40
3139 10996 3.746045 AACCGACGATGTAGGCATTAT 57.254 42.857 0.00 0.00 35.07 1.28
3140 10997 4.652421 TTAACCGACGATGTAGGCATTA 57.348 40.909 0.00 0.00 35.07 1.90
3141 10998 3.530265 TTAACCGACGATGTAGGCATT 57.470 42.857 0.00 0.00 35.07 3.56
3142 10999 3.530265 TTTAACCGACGATGTAGGCAT 57.470 42.857 0.00 0.00 38.18 4.40
3143 11000 3.316071 TTTTAACCGACGATGTAGGCA 57.684 42.857 0.00 0.00 31.46 4.75
3166 11023 9.434275 TGGATTCATTCCTTAGTATTGTCTCTA 57.566 33.333 0.00 0.00 45.68 2.43
3167 11024 8.324191 TGGATTCATTCCTTAGTATTGTCTCT 57.676 34.615 0.00 0.00 45.68 3.10
3168 11025 8.831550 GTTGGATTCATTCCTTAGTATTGTCTC 58.168 37.037 0.00 0.00 45.68 3.36
3169 11026 7.775561 GGTTGGATTCATTCCTTAGTATTGTCT 59.224 37.037 0.00 0.00 45.68 3.41
3170 11027 7.556275 TGGTTGGATTCATTCCTTAGTATTGTC 59.444 37.037 0.00 0.00 45.68 3.18
3171 11028 7.339466 GTGGTTGGATTCATTCCTTAGTATTGT 59.661 37.037 0.00 0.00 45.68 2.71
3172 11029 7.339212 TGTGGTTGGATTCATTCCTTAGTATTG 59.661 37.037 0.00 0.00 45.68 1.90
3173 11030 7.410174 TGTGGTTGGATTCATTCCTTAGTATT 58.590 34.615 0.00 0.00 45.68 1.89
3174 11031 6.969043 TGTGGTTGGATTCATTCCTTAGTAT 58.031 36.000 0.00 0.00 45.68 2.12
3175 11032 6.381498 TGTGGTTGGATTCATTCCTTAGTA 57.619 37.500 0.00 0.00 45.68 1.82
3176 11033 5.255397 TGTGGTTGGATTCATTCCTTAGT 57.745 39.130 0.00 0.00 45.68 2.24
3177 11034 6.434028 TCTTTGTGGTTGGATTCATTCCTTAG 59.566 38.462 0.00 0.00 45.68 2.18
3178 11035 6.208599 GTCTTTGTGGTTGGATTCATTCCTTA 59.791 38.462 0.00 0.00 45.68 2.69
3179 11036 5.011023 GTCTTTGTGGTTGGATTCATTCCTT 59.989 40.000 0.00 0.00 45.68 3.36
3180 11037 4.524328 GTCTTTGTGGTTGGATTCATTCCT 59.476 41.667 0.00 0.00 45.68 3.36
3181 11038 4.615912 CGTCTTTGTGGTTGGATTCATTCC 60.616 45.833 0.00 0.00 45.69 3.01
3182 11039 4.215399 TCGTCTTTGTGGTTGGATTCATTC 59.785 41.667 0.00 0.00 0.00 2.67
3183 11040 4.141287 TCGTCTTTGTGGTTGGATTCATT 58.859 39.130 0.00 0.00 0.00 2.57
3184 11041 3.750371 TCGTCTTTGTGGTTGGATTCAT 58.250 40.909 0.00 0.00 0.00 2.57
3185 11042 3.201353 TCGTCTTTGTGGTTGGATTCA 57.799 42.857 0.00 0.00 0.00 2.57
3186 11043 3.119849 CCATCGTCTTTGTGGTTGGATTC 60.120 47.826 0.00 0.00 0.00 2.52
3187 11044 2.819608 CCATCGTCTTTGTGGTTGGATT 59.180 45.455 0.00 0.00 0.00 3.01
3188 11045 2.224769 ACCATCGTCTTTGTGGTTGGAT 60.225 45.455 0.00 0.00 43.44 3.41
3189 11046 1.142060 ACCATCGTCTTTGTGGTTGGA 59.858 47.619 0.00 0.00 43.44 3.53
3190 11047 1.535462 GACCATCGTCTTTGTGGTTGG 59.465 52.381 0.00 0.00 45.79 3.77
3191 11048 2.969443 GACCATCGTCTTTGTGGTTG 57.031 50.000 0.00 0.00 45.79 3.77
3201 11058 2.921754 CCGTTGAAGTTAGACCATCGTC 59.078 50.000 0.00 0.00 39.50 4.20
3202 11059 2.353406 CCCGTTGAAGTTAGACCATCGT 60.353 50.000 0.00 0.00 0.00 3.73
3203 11060 2.268298 CCCGTTGAAGTTAGACCATCG 58.732 52.381 0.00 0.00 0.00 3.84
3204 11061 2.027469 ACCCCGTTGAAGTTAGACCATC 60.027 50.000 0.00 0.00 0.00 3.51
3205 11062 1.982958 ACCCCGTTGAAGTTAGACCAT 59.017 47.619 0.00 0.00 0.00 3.55
3206 11063 1.426751 ACCCCGTTGAAGTTAGACCA 58.573 50.000 0.00 0.00 0.00 4.02
3207 11064 2.827921 TCTACCCCGTTGAAGTTAGACC 59.172 50.000 0.00 0.00 0.00 3.85
3208 11065 3.509184 ACTCTACCCCGTTGAAGTTAGAC 59.491 47.826 0.00 0.00 0.00 2.59
3209 11066 3.771216 ACTCTACCCCGTTGAAGTTAGA 58.229 45.455 0.00 0.00 0.00 2.10
3210 11067 4.460382 TGTACTCTACCCCGTTGAAGTTAG 59.540 45.833 0.00 0.00 0.00 2.34
3211 11068 4.406456 TGTACTCTACCCCGTTGAAGTTA 58.594 43.478 0.00 0.00 0.00 2.24
3212 11069 3.233507 TGTACTCTACCCCGTTGAAGTT 58.766 45.455 0.00 0.00 0.00 2.66
3213 11070 2.824341 CTGTACTCTACCCCGTTGAAGT 59.176 50.000 0.00 0.00 0.00 3.01
3214 11071 3.087031 TCTGTACTCTACCCCGTTGAAG 58.913 50.000 0.00 0.00 0.00 3.02
3215 11072 3.087031 CTCTGTACTCTACCCCGTTGAA 58.913 50.000 0.00 0.00 0.00 2.69
3216 11073 2.719739 CTCTGTACTCTACCCCGTTGA 58.280 52.381 0.00 0.00 0.00 3.18
3217 11074 1.134560 GCTCTGTACTCTACCCCGTTG 59.865 57.143 0.00 0.00 0.00 4.10
3218 11075 1.005687 AGCTCTGTACTCTACCCCGTT 59.994 52.381 0.00 0.00 0.00 4.44
3219 11076 0.624785 AGCTCTGTACTCTACCCCGT 59.375 55.000 0.00 0.00 0.00 5.28
3220 11077 2.158784 ACTAGCTCTGTACTCTACCCCG 60.159 54.545 0.00 0.00 0.00 5.73
3221 11078 3.117963 TCACTAGCTCTGTACTCTACCCC 60.118 52.174 0.00 0.00 0.00 4.95
3222 11079 3.878699 GTCACTAGCTCTGTACTCTACCC 59.121 52.174 0.00 0.00 0.00 3.69
3223 11080 3.556775 CGTCACTAGCTCTGTACTCTACC 59.443 52.174 0.00 0.00 0.00 3.18
3224 11081 4.183101 ACGTCACTAGCTCTGTACTCTAC 58.817 47.826 0.00 0.00 0.00 2.59
3225 11082 4.160065 AGACGTCACTAGCTCTGTACTCTA 59.840 45.833 19.50 0.00 0.00 2.43
3226 11083 3.055675 AGACGTCACTAGCTCTGTACTCT 60.056 47.826 19.50 0.00 0.00 3.24
3227 11084 3.264104 AGACGTCACTAGCTCTGTACTC 58.736 50.000 19.50 0.00 0.00 2.59
3228 11085 3.337694 AGACGTCACTAGCTCTGTACT 57.662 47.619 19.50 0.00 0.00 2.73
3229 11086 4.492247 CGTAAGACGTCACTAGCTCTGTAC 60.492 50.000 19.50 3.31 43.02 2.90
3230 11087 3.615937 CGTAAGACGTCACTAGCTCTGTA 59.384 47.826 19.50 0.00 43.02 2.74
3231 11088 2.415857 CGTAAGACGTCACTAGCTCTGT 59.584 50.000 19.50 0.00 43.02 3.41
3232 11089 2.671888 TCGTAAGACGTCACTAGCTCTG 59.328 50.000 19.50 0.00 45.01 3.35
3233 11090 2.969990 TCGTAAGACGTCACTAGCTCT 58.030 47.619 19.50 0.00 45.01 4.09
3247 11104 2.030457 GCCACCATCGTCATTTCGTAAG 59.970 50.000 0.00 0.00 0.00 2.34
3248 11105 2.004017 GCCACCATCGTCATTTCGTAA 58.996 47.619 0.00 0.00 0.00 3.18
3249 11106 1.647346 GCCACCATCGTCATTTCGTA 58.353 50.000 0.00 0.00 0.00 3.43
3250 11107 1.358725 CGCCACCATCGTCATTTCGT 61.359 55.000 0.00 0.00 0.00 3.85
3251 11108 1.348250 CGCCACCATCGTCATTTCG 59.652 57.895 0.00 0.00 0.00 3.46
3252 11109 1.326548 GTACGCCACCATCGTCATTTC 59.673 52.381 0.00 0.00 40.89 2.17
3253 11110 1.365699 GTACGCCACCATCGTCATTT 58.634 50.000 0.00 0.00 40.89 2.32
3254 11111 3.059603 GTACGCCACCATCGTCATT 57.940 52.632 0.00 0.00 40.89 2.57
3255 11112 4.827481 GTACGCCACCATCGTCAT 57.173 55.556 0.00 0.00 40.89 3.06
3284 11141 2.754946 TCCTACGGAGCATCGTTTTT 57.245 45.000 9.48 0.00 43.59 1.94
3285 11142 2.798499 CGATCCTACGGAGCATCGTTTT 60.798 50.000 13.05 0.00 43.59 2.43
3286 11143 1.269102 CGATCCTACGGAGCATCGTTT 60.269 52.381 13.05 0.00 43.59 3.60
3287 11144 0.311165 CGATCCTACGGAGCATCGTT 59.689 55.000 13.05 0.00 43.59 3.85
3288 11145 0.534427 TCGATCCTACGGAGCATCGT 60.534 55.000 20.12 9.19 45.88 3.73
3289 11146 0.110147 GTCGATCCTACGGAGCATCG 60.110 60.000 15.11 15.11 38.11 3.84
3290 11147 1.240256 AGTCGATCCTACGGAGCATC 58.760 55.000 0.00 0.00 38.11 3.91
3291 11148 1.693627 AAGTCGATCCTACGGAGCAT 58.306 50.000 0.00 0.00 38.11 3.79
3292 11149 1.471119 AAAGTCGATCCTACGGAGCA 58.529 50.000 0.00 0.00 38.11 4.26
3293 11150 2.580966 AAAAGTCGATCCTACGGAGC 57.419 50.000 0.00 0.00 34.05 4.70
3294 11151 4.990257 TGTAAAAAGTCGATCCTACGGAG 58.010 43.478 0.00 0.00 34.05 4.63
3295 11152 5.163513 GTTGTAAAAAGTCGATCCTACGGA 58.836 41.667 0.00 0.00 35.55 4.69
3296 11153 4.925054 TGTTGTAAAAAGTCGATCCTACGG 59.075 41.667 0.00 0.00 0.00 4.02
3297 11154 6.642683 ATGTTGTAAAAAGTCGATCCTACG 57.357 37.500 0.00 0.00 0.00 3.51


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.