Multiple sequence alignment - TraesCS3B01G521900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G521900 chr3B 100.000 2102 0 0 1 2102 765028442 765030543 0.000000e+00 3882
1 TraesCS3B01G521900 chr3B 100.000 265 0 0 2404 2668 765030845 765031109 8.580000e-135 490
2 TraesCS3B01G521900 chr3A 91.991 1723 107 10 338 2058 710707142 710708835 0.000000e+00 2388
3 TraesCS3B01G521900 chr3A 85.387 349 41 6 1060 1407 703512591 703512930 1.170000e-93 353
4 TraesCS3B01G521900 chr3D 90.640 1421 98 21 692 2102 574889362 574887967 0.000000e+00 1855
5 TraesCS3B01G521900 chr3D 84.892 278 30 11 375 650 574889638 574889371 1.220000e-68 270
6 TraesCS3B01G521900 chr2B 97.358 265 7 0 2404 2668 646043812 646043548 4.050000e-123 451
7 TraesCS3B01G521900 chr2B 93.985 266 15 1 2404 2668 613088385 613088120 4.140000e-108 401
8 TraesCS3B01G521900 chr2B 95.035 141 7 0 2528 2668 666200243 666200383 3.460000e-54 222
9 TraesCS3B01G521900 chr4A 96.604 265 9 0 2404 2668 727611290 727611554 8.770000e-120 440
10 TraesCS3B01G521900 chr2A 96.604 265 9 0 2404 2668 761052233 761051969 8.770000e-120 440
11 TraesCS3B01G521900 chr2A 95.580 181 5 2 1 180 732561378 732561556 1.210000e-73 287
12 TraesCS3B01G521900 chr7B 90.441 272 15 4 2404 2668 61798843 61798576 5.470000e-92 348
13 TraesCS3B01G521900 chr7B 87.085 271 15 1 2418 2668 654942610 654942340 3.360000e-74 289
14 TraesCS3B01G521900 chr4B 97.778 180 2 1 1 180 482128681 482128858 2.580000e-80 309
15 TraesCS3B01G521900 chr5B 87.018 285 17 4 2404 2668 323070958 323071242 1.200000e-78 303
16 TraesCS3B01G521900 chr7D 96.133 181 5 2 1 181 596257510 596257332 7.220000e-76 294
17 TraesCS3B01G521900 chr5D 95.055 182 7 2 1 181 362192754 362192934 4.350000e-73 285
18 TraesCS3B01G521900 chr5D 93.048 187 7 5 1 187 448144679 448144499 4.380000e-68 268
19 TraesCS3B01G521900 chr7A 93.264 193 9 4 1 190 727126889 727127080 5.620000e-72 281
20 TraesCS3B01G521900 chr7A 93.048 187 9 4 1 183 150237292 150237106 1.220000e-68 270
21 TraesCS3B01G521900 chr6B 95.000 180 7 1 1 180 671227559 671227736 5.620000e-72 281
22 TraesCS3B01G521900 chr2D 94.444 180 6 2 1 180 571884970 571885145 9.410000e-70 274
23 TraesCS3B01G521900 chr4D 84.698 281 23 4 2404 2664 323263770 323264050 2.040000e-66 263
24 TraesCS3B01G521900 chr1D 93.478 138 9 0 2528 2665 151000747 151000884 3.480000e-49 206


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G521900 chr3B 765028442 765031109 2667 False 2186.0 3882 100.000 1 2668 2 chr3B.!!$F1 2667
1 TraesCS3B01G521900 chr3A 710707142 710708835 1693 False 2388.0 2388 91.991 338 2058 1 chr3A.!!$F2 1720
2 TraesCS3B01G521900 chr3D 574887967 574889638 1671 True 1062.5 1855 87.766 375 2102 2 chr3D.!!$R1 1727

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
248 249 0.100503 AGCCGTTGACAAACAGTTGC 59.899 50.0 0.0 0.0 38.39 4.17 F
249 250 0.179150 GCCGTTGACAAACAGTTGCA 60.179 50.0 0.0 0.0 38.39 4.08 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1619 1644 0.388520 TGACGATGAACACGAGGCAG 60.389 55.000 0.00 0.0 34.7 4.85 R
1998 2023 1.068895 CATTGAAAACAGTGGCCAGCA 59.931 47.619 5.11 0.0 0.0 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.614923 TTGTCTTTTTCGTTGTGAAGTCA 57.385 34.783 0.00 0.00 37.99 3.41
24 25 5.614923 TGTCTTTTTCGTTGTGAAGTCAA 57.385 34.783 0.00 0.00 37.99 3.18
25 26 5.387279 TGTCTTTTTCGTTGTGAAGTCAAC 58.613 37.500 0.00 0.00 42.67 3.18
33 34 4.870221 GTTGTGAAGTCAACGTAGGTTT 57.130 40.909 0.00 0.00 38.30 3.27
34 35 5.225899 GTTGTGAAGTCAACGTAGGTTTT 57.774 39.130 0.00 0.00 38.30 2.43
35 36 5.633927 GTTGTGAAGTCAACGTAGGTTTTT 58.366 37.500 0.00 0.00 38.30 1.94
76 77 5.277857 ACTAGTGTGCAAGTAAGTCAAGT 57.722 39.130 0.00 0.00 0.00 3.16
77 78 5.671493 ACTAGTGTGCAAGTAAGTCAAGTT 58.329 37.500 0.00 0.00 0.00 2.66
78 79 6.113411 ACTAGTGTGCAAGTAAGTCAAGTTT 58.887 36.000 0.00 0.00 0.00 2.66
79 80 7.270047 ACTAGTGTGCAAGTAAGTCAAGTTTA 58.730 34.615 0.00 0.00 0.00 2.01
80 81 6.995511 AGTGTGCAAGTAAGTCAAGTTTAA 57.004 33.333 0.00 0.00 0.00 1.52
81 82 7.568199 AGTGTGCAAGTAAGTCAAGTTTAAT 57.432 32.000 0.00 0.00 0.00 1.40
82 83 7.639945 AGTGTGCAAGTAAGTCAAGTTTAATC 58.360 34.615 0.00 0.00 0.00 1.75
83 84 7.499232 AGTGTGCAAGTAAGTCAAGTTTAATCT 59.501 33.333 0.00 0.00 0.00 2.40
84 85 8.770828 GTGTGCAAGTAAGTCAAGTTTAATCTA 58.229 33.333 0.00 0.00 0.00 1.98
85 86 9.332502 TGTGCAAGTAAGTCAAGTTTAATCTAA 57.667 29.630 0.00 0.00 0.00 2.10
160 161 7.284919 CCATATAGGGTGTATATACATGCGA 57.715 40.000 18.27 6.01 38.63 5.10
161 162 7.371159 CCATATAGGGTGTATATACATGCGAG 58.629 42.308 18.27 5.08 38.63 5.03
162 163 7.230712 CCATATAGGGTGTATATACATGCGAGA 59.769 40.741 18.27 4.71 38.63 4.04
163 164 6.701145 ATAGGGTGTATATACATGCGAGAG 57.299 41.667 18.27 0.00 38.63 3.20
178 179 2.289565 CGAGAGCCAAAGGGTATTTCC 58.710 52.381 0.00 0.00 36.17 3.13
194 195 7.750947 GGTATTTCCCTACCATATAGTCCAT 57.249 40.000 0.00 0.00 40.81 3.41
195 196 8.159229 GGTATTTCCCTACCATATAGTCCATT 57.841 38.462 0.00 0.00 40.81 3.16
196 197 8.265764 GGTATTTCCCTACCATATAGTCCATTC 58.734 40.741 0.00 0.00 40.81 2.67
197 198 5.995565 TTCCCTACCATATAGTCCATTCG 57.004 43.478 0.00 0.00 0.00 3.34
198 199 5.006896 TCCCTACCATATAGTCCATTCGT 57.993 43.478 0.00 0.00 0.00 3.85
199 200 5.399991 TCCCTACCATATAGTCCATTCGTT 58.600 41.667 0.00 0.00 0.00 3.85
200 201 5.479375 TCCCTACCATATAGTCCATTCGTTC 59.521 44.000 0.00 0.00 0.00 3.95
201 202 5.337330 CCCTACCATATAGTCCATTCGTTCC 60.337 48.000 0.00 0.00 0.00 3.62
202 203 5.245301 CCTACCATATAGTCCATTCGTTCCA 59.755 44.000 0.00 0.00 0.00 3.53
203 204 5.215252 ACCATATAGTCCATTCGTTCCAG 57.785 43.478 0.00 0.00 0.00 3.86
204 205 4.654262 ACCATATAGTCCATTCGTTCCAGT 59.346 41.667 0.00 0.00 0.00 4.00
205 206 5.836898 ACCATATAGTCCATTCGTTCCAGTA 59.163 40.000 0.00 0.00 0.00 2.74
206 207 6.157211 CCATATAGTCCATTCGTTCCAGTAC 58.843 44.000 0.00 0.00 0.00 2.73
207 208 2.649331 AGTCCATTCGTTCCAGTACG 57.351 50.000 0.00 0.00 42.68 3.67
208 209 1.203994 AGTCCATTCGTTCCAGTACGG 59.796 52.381 0.00 0.00 41.67 4.02
209 210 1.203052 GTCCATTCGTTCCAGTACGGA 59.797 52.381 0.00 0.00 44.40 4.69
218 219 1.843368 TCCAGTACGGAGTGTTAGGG 58.157 55.000 0.86 0.00 45.73 3.53
219 220 1.076024 TCCAGTACGGAGTGTTAGGGT 59.924 52.381 0.86 0.00 45.73 4.34
220 221 1.897802 CCAGTACGGAGTGTTAGGGTT 59.102 52.381 0.86 0.00 45.73 4.11
221 222 2.301009 CCAGTACGGAGTGTTAGGGTTT 59.699 50.000 0.86 0.00 45.73 3.27
222 223 3.323243 CAGTACGGAGTGTTAGGGTTTG 58.677 50.000 0.00 0.00 45.73 2.93
223 224 2.071540 GTACGGAGTGTTAGGGTTTGC 58.928 52.381 0.00 0.00 45.73 3.68
224 225 0.763035 ACGGAGTGTTAGGGTTTGCT 59.237 50.000 0.00 0.00 42.51 3.91
225 226 1.972795 ACGGAGTGTTAGGGTTTGCTA 59.027 47.619 0.00 0.00 42.51 3.49
226 227 2.028385 ACGGAGTGTTAGGGTTTGCTAG 60.028 50.000 0.00 0.00 42.51 3.42
227 228 2.677037 CGGAGTGTTAGGGTTTGCTAGG 60.677 54.545 0.00 0.00 0.00 3.02
228 229 2.570302 GGAGTGTTAGGGTTTGCTAGGA 59.430 50.000 0.00 0.00 0.00 2.94
229 230 3.008704 GGAGTGTTAGGGTTTGCTAGGAA 59.991 47.826 0.00 0.00 0.00 3.36
230 231 4.254492 GAGTGTTAGGGTTTGCTAGGAAG 58.746 47.826 0.00 0.00 0.00 3.46
240 241 3.226884 GCTAGGAAGCCGTTGACAA 57.773 52.632 0.00 0.00 43.40 3.18
241 242 1.519408 GCTAGGAAGCCGTTGACAAA 58.481 50.000 0.00 0.00 43.40 2.83
242 243 1.197036 GCTAGGAAGCCGTTGACAAAC 59.803 52.381 0.00 0.00 43.40 2.93
243 244 2.489971 CTAGGAAGCCGTTGACAAACA 58.510 47.619 0.00 0.00 35.94 2.83
244 245 1.308998 AGGAAGCCGTTGACAAACAG 58.691 50.000 0.00 0.00 35.94 3.16
245 246 1.021968 GGAAGCCGTTGACAAACAGT 58.978 50.000 0.00 0.00 35.94 3.55
246 247 1.404035 GGAAGCCGTTGACAAACAGTT 59.596 47.619 0.00 0.00 35.94 3.16
247 248 2.450160 GAAGCCGTTGACAAACAGTTG 58.550 47.619 0.00 0.00 40.84 3.16
248 249 0.100503 AGCCGTTGACAAACAGTTGC 59.899 50.000 0.00 0.00 38.39 4.17
249 250 0.179150 GCCGTTGACAAACAGTTGCA 60.179 50.000 0.00 0.00 38.39 4.08
250 251 1.544686 CCGTTGACAAACAGTTGCAC 58.455 50.000 0.00 0.00 38.39 4.57
251 252 1.132262 CCGTTGACAAACAGTTGCACT 59.868 47.619 0.00 0.00 38.39 4.40
252 253 2.353269 CCGTTGACAAACAGTTGCACTA 59.647 45.455 0.00 0.00 38.39 2.74
253 254 3.003275 CCGTTGACAAACAGTTGCACTAT 59.997 43.478 0.00 0.00 38.39 2.12
254 255 3.968096 CGTTGACAAACAGTTGCACTATG 59.032 43.478 0.00 0.00 38.39 2.23
255 256 4.260579 CGTTGACAAACAGTTGCACTATGA 60.261 41.667 0.00 0.00 38.39 2.15
256 257 5.560760 CGTTGACAAACAGTTGCACTATGAT 60.561 40.000 0.00 0.00 38.39 2.45
257 258 5.361135 TGACAAACAGTTGCACTATGATG 57.639 39.130 0.00 0.00 38.39 3.07
258 259 5.062528 TGACAAACAGTTGCACTATGATGA 58.937 37.500 0.00 0.00 38.39 2.92
259 260 5.706833 TGACAAACAGTTGCACTATGATGAT 59.293 36.000 0.00 0.00 38.39 2.45
260 261 5.946298 ACAAACAGTTGCACTATGATGATG 58.054 37.500 0.00 0.00 38.39 3.07
261 262 5.474532 ACAAACAGTTGCACTATGATGATGT 59.525 36.000 0.00 0.00 38.39 3.06
262 263 6.654582 ACAAACAGTTGCACTATGATGATGTA 59.345 34.615 0.00 0.00 38.39 2.29
263 264 7.174772 ACAAACAGTTGCACTATGATGATGTAA 59.825 33.333 0.00 0.00 38.39 2.41
264 265 7.686438 AACAGTTGCACTATGATGATGTAAA 57.314 32.000 0.00 0.00 0.00 2.01
265 266 7.870509 ACAGTTGCACTATGATGATGTAAAT 57.129 32.000 0.00 0.00 0.00 1.40
266 267 7.923888 ACAGTTGCACTATGATGATGTAAATC 58.076 34.615 0.00 0.00 0.00 2.17
267 268 7.772292 ACAGTTGCACTATGATGATGTAAATCT 59.228 33.333 0.00 0.00 0.00 2.40
268 269 8.618677 CAGTTGCACTATGATGATGTAAATCTT 58.381 33.333 0.00 0.00 0.00 2.40
269 270 8.618677 AGTTGCACTATGATGATGTAAATCTTG 58.381 33.333 0.00 0.00 0.00 3.02
270 271 8.615211 GTTGCACTATGATGATGTAAATCTTGA 58.385 33.333 0.00 0.00 0.00 3.02
271 272 8.913487 TGCACTATGATGATGTAAATCTTGAT 57.087 30.769 0.00 0.00 0.00 2.57
285 286 9.460019 TGTAAATCTTGATACAAATCATGACCA 57.540 29.630 0.00 1.01 44.49 4.02
286 287 9.722056 GTAAATCTTGATACAAATCATGACCAC 57.278 33.333 0.00 2.85 44.49 4.16
287 288 7.943079 AATCTTGATACAAATCATGACCACA 57.057 32.000 0.00 0.00 44.49 4.17
288 289 7.943079 ATCTTGATACAAATCATGACCACAA 57.057 32.000 0.00 0.00 44.49 3.33
289 290 7.381766 TCTTGATACAAATCATGACCACAAG 57.618 36.000 0.00 7.72 41.73 3.16
290 291 6.942005 TCTTGATACAAATCATGACCACAAGT 59.058 34.615 0.00 0.00 41.73 3.16
291 292 7.448161 TCTTGATACAAATCATGACCACAAGTT 59.552 33.333 0.00 0.00 41.73 2.66
292 293 8.628630 TTGATACAAATCATGACCACAAGTTA 57.371 30.769 0.00 0.00 41.73 2.24
293 294 8.806429 TGATACAAATCATGACCACAAGTTAT 57.194 30.769 0.00 0.00 37.20 1.89
294 295 9.241919 TGATACAAATCATGACCACAAGTTATT 57.758 29.630 0.00 0.00 37.20 1.40
295 296 9.722056 GATACAAATCATGACCACAAGTTATTC 57.278 33.333 0.00 0.00 31.93 1.75
296 297 6.611381 ACAAATCATGACCACAAGTTATTCG 58.389 36.000 0.00 0.00 0.00 3.34
297 298 6.429692 ACAAATCATGACCACAAGTTATTCGA 59.570 34.615 0.00 0.00 0.00 3.71
298 299 7.040755 ACAAATCATGACCACAAGTTATTCGAA 60.041 33.333 0.00 0.00 0.00 3.71
299 300 7.447374 AATCATGACCACAAGTTATTCGAAA 57.553 32.000 0.00 0.00 0.00 3.46
300 301 7.630242 ATCATGACCACAAGTTATTCGAAAT 57.370 32.000 0.00 0.00 0.00 2.17
301 302 7.072177 TCATGACCACAAGTTATTCGAAATC 57.928 36.000 0.00 0.00 0.00 2.17
302 303 6.878923 TCATGACCACAAGTTATTCGAAATCT 59.121 34.615 0.00 0.00 0.00 2.40
303 304 8.038351 TCATGACCACAAGTTATTCGAAATCTA 58.962 33.333 0.00 0.00 0.00 1.98
304 305 8.830580 CATGACCACAAGTTATTCGAAATCTAT 58.169 33.333 0.00 0.00 0.00 1.98
305 306 8.196802 TGACCACAAGTTATTCGAAATCTATG 57.803 34.615 0.00 2.00 0.00 2.23
306 307 8.038351 TGACCACAAGTTATTCGAAATCTATGA 58.962 33.333 0.00 0.00 0.00 2.15
307 308 8.786826 ACCACAAGTTATTCGAAATCTATGAA 57.213 30.769 0.00 0.00 0.00 2.57
308 309 9.396022 ACCACAAGTTATTCGAAATCTATGAAT 57.604 29.630 0.00 0.00 36.40 2.57
309 310 9.869844 CCACAAGTTATTCGAAATCTATGAATC 57.130 33.333 0.00 0.00 34.40 2.52
329 330 9.896645 ATGAATCTAGTAACATCAACTTCATGT 57.103 29.630 0.00 0.00 35.94 3.21
330 331 9.371136 TGAATCTAGTAACATCAACTTCATGTC 57.629 33.333 0.00 0.00 33.12 3.06
331 332 9.371136 GAATCTAGTAACATCAACTTCATGTCA 57.629 33.333 0.00 0.00 33.12 3.58
332 333 8.709386 ATCTAGTAACATCAACTTCATGTCAC 57.291 34.615 0.00 0.00 33.12 3.67
333 334 7.666623 TCTAGTAACATCAACTTCATGTCACA 58.333 34.615 0.00 0.00 33.12 3.58
334 335 8.314021 TCTAGTAACATCAACTTCATGTCACAT 58.686 33.333 0.00 0.00 33.12 3.21
335 336 9.586435 CTAGTAACATCAACTTCATGTCACATA 57.414 33.333 0.00 0.00 33.12 2.29
336 337 8.846943 AGTAACATCAACTTCATGTCACATAA 57.153 30.769 0.00 0.00 33.12 1.90
337 338 9.283768 AGTAACATCAACTTCATGTCACATAAA 57.716 29.630 0.00 0.00 33.12 1.40
338 339 9.546909 GTAACATCAACTTCATGTCACATAAAG 57.453 33.333 0.00 0.00 33.12 1.85
339 340 6.615088 ACATCAACTTCATGTCACATAAAGC 58.385 36.000 0.00 0.00 27.49 3.51
345 346 7.686438 ACTTCATGTCACATAAAGCACATAA 57.314 32.000 0.00 0.00 0.00 1.90
523 524 2.996249 ACTGTCCATATCAGTGCCAG 57.004 50.000 0.00 0.00 43.32 4.85
566 580 5.699097 AAATGCAAACCTACGTAATGTGT 57.301 34.783 0.00 0.00 0.00 3.72
567 581 5.699097 AATGCAAACCTACGTAATGTGTT 57.301 34.783 0.00 0.00 0.00 3.32
568 582 6.804770 AATGCAAACCTACGTAATGTGTTA 57.195 33.333 0.00 0.00 0.00 2.41
569 583 5.594724 TGCAAACCTACGTAATGTGTTAC 57.405 39.130 0.00 0.00 37.44 2.50
600 614 4.895224 ACGTTTCTTTCCTTTCTCAACC 57.105 40.909 0.00 0.00 0.00 3.77
612 626 4.568380 CCTTTCTCAACCAATCATCTCCCA 60.568 45.833 0.00 0.00 0.00 4.37
623 637 3.266510 TCATCTCCCACCTGAATTTCG 57.733 47.619 0.00 0.00 0.00 3.46
624 638 1.672881 CATCTCCCACCTGAATTTCGC 59.327 52.381 0.00 0.00 0.00 4.70
633 647 2.360726 GAATTTCGCGGGGTGGGT 60.361 61.111 6.13 0.00 0.00 4.51
668 682 3.303938 TCTTCCAATCAAAACAGGCCAA 58.696 40.909 5.01 0.00 0.00 4.52
675 689 0.318107 CAAAACAGGCCAAGTCAGCG 60.318 55.000 5.01 0.00 0.00 5.18
785 800 0.608130 CACCGATCCAGACAAGGACA 59.392 55.000 0.00 0.00 41.30 4.02
834 849 2.552315 TCTTGGGCGATCAAAACAAGAC 59.448 45.455 12.39 0.00 41.63 3.01
840 855 2.156891 GCGATCAAAACAAGACGCTGTA 59.843 45.455 0.00 0.00 42.19 2.74
889 904 3.356639 GACGACCAGATCAGCGCCA 62.357 63.158 2.29 0.00 0.00 5.69
892 907 4.479993 ACCAGATCAGCGCCAGCC 62.480 66.667 2.29 0.00 46.67 4.85
893 908 4.172512 CCAGATCAGCGCCAGCCT 62.173 66.667 2.29 0.00 46.67 4.58
922 937 3.945921 TCGCTCTATATGTATCCTTCCGG 59.054 47.826 0.00 0.00 0.00 5.14
934 949 1.550524 TCCTTCCGGTCAAGTGATCAG 59.449 52.381 0.00 0.00 0.00 2.90
994 1011 0.248498 CGTACATCTGTGCCGATCGT 60.248 55.000 15.09 0.00 0.00 3.73
998 1015 0.647410 CATCTGTGCCGATCGTCAAC 59.353 55.000 15.09 9.51 0.00 3.18
1192 1209 6.887002 AGAAAGATCCACCAAACTAAATCTCC 59.113 38.462 0.00 0.00 0.00 3.71
1199 1216 4.154195 CACCAAACTAAATCTCCGTTCTGG 59.846 45.833 0.00 0.00 40.09 3.86
1223 1241 3.813596 GGCGACGGCATCTCAAAT 58.186 55.556 17.49 0.00 42.47 2.32
1225 1243 0.248215 GGCGACGGCATCTCAAATTG 60.248 55.000 17.49 0.00 42.47 2.32
1226 1244 0.447801 GCGACGGCATCTCAAATTGT 59.552 50.000 0.00 0.00 39.62 2.71
1227 1245 1.529826 GCGACGGCATCTCAAATTGTC 60.530 52.381 0.00 0.00 39.62 3.18
1228 1246 1.731709 CGACGGCATCTCAAATTGTCA 59.268 47.619 0.00 0.00 0.00 3.58
1229 1247 2.159430 CGACGGCATCTCAAATTGTCAA 59.841 45.455 0.00 0.00 0.00 3.18
1230 1248 3.181507 CGACGGCATCTCAAATTGTCAAT 60.182 43.478 0.00 0.00 0.00 2.57
1231 1249 4.033932 CGACGGCATCTCAAATTGTCAATA 59.966 41.667 0.00 0.00 0.00 1.90
1232 1250 5.235305 ACGGCATCTCAAATTGTCAATAC 57.765 39.130 0.00 0.00 0.00 1.89
1233 1251 4.699735 ACGGCATCTCAAATTGTCAATACA 59.300 37.500 0.00 0.00 0.00 2.29
1251 1269 5.854010 ATACATGTTCGACTGTCAGGTAT 57.146 39.130 2.30 3.96 35.32 2.73
1426 1444 1.741770 CAAGTCCCCTGTACGCTGC 60.742 63.158 0.00 0.00 0.00 5.25
1433 1458 1.141881 CCTGTACGCTGCCTAGTGG 59.858 63.158 0.00 0.00 38.76 4.00
1514 1539 4.244463 GCGGCGGGCTTGGGTATA 62.244 66.667 9.78 0.00 39.11 1.47
1544 1569 2.638354 CCAGCGGCAGATTGGCAAA 61.638 57.895 3.01 0.00 43.94 3.68
1546 1571 0.526954 CAGCGGCAGATTGGCAAATC 60.527 55.000 3.01 5.61 43.94 2.17
1619 1644 2.467826 GCTGTTGCTCGCATCCCTC 61.468 63.158 0.00 0.00 36.03 4.30
1623 1648 3.687321 TTGCTCGCATCCCTCTGCC 62.687 63.158 0.00 0.00 39.00 4.85
1643 1668 2.479560 CCTCGTGTTCATCGTCATGCTA 60.480 50.000 0.00 0.00 0.00 3.49
1810 1835 4.065281 GTACCTGGCCGTCGTGCT 62.065 66.667 0.00 0.00 0.00 4.40
1844 1869 4.895961 AGTAGACTTTGGTAGAACTTGCC 58.104 43.478 0.00 0.00 0.00 4.52
1882 1907 0.970640 TAGTTGGTTGGCTGTAGCGA 59.029 50.000 0.00 0.00 43.26 4.93
1885 1910 2.170607 AGTTGGTTGGCTGTAGCGATAT 59.829 45.455 0.00 0.00 43.26 1.63
1886 1911 2.943033 GTTGGTTGGCTGTAGCGATATT 59.057 45.455 0.00 0.00 43.26 1.28
1897 1922 5.196341 TGTAGCGATATTAGACCAGTTGG 57.804 43.478 0.00 0.00 42.17 3.77
2028 2053 6.291585 GCCACTGTTTTCAATGACGTAAAAAG 60.292 38.462 0.00 0.00 0.00 2.27
2031 2056 7.486551 CACTGTTTTCAATGACGTAAAAAGGAA 59.513 33.333 0.00 0.00 0.00 3.36
2065 2090 8.582433 AATTTGTATTTTTGAAAGGTACGGTG 57.418 30.769 0.00 0.00 0.00 4.94
2066 2091 5.110940 TGTATTTTTGAAAGGTACGGTGC 57.889 39.130 0.00 0.00 0.00 5.01
2067 2092 2.759538 TTTTTGAAAGGTACGGTGCG 57.240 45.000 0.00 0.00 0.00 5.34
2068 2093 0.308376 TTTTGAAAGGTACGGTGCGC 59.692 50.000 0.00 0.00 0.00 6.09
2069 2094 0.814410 TTTGAAAGGTACGGTGCGCA 60.814 50.000 5.66 5.66 0.00 6.09
2070 2095 0.604243 TTGAAAGGTACGGTGCGCAT 60.604 50.000 15.91 0.00 0.00 4.73
2071 2096 0.604243 TGAAAGGTACGGTGCGCATT 60.604 50.000 15.91 0.00 0.00 3.56
2072 2097 1.337917 TGAAAGGTACGGTGCGCATTA 60.338 47.619 15.91 2.33 0.00 1.90
2073 2098 1.937899 GAAAGGTACGGTGCGCATTAT 59.062 47.619 15.91 4.16 0.00 1.28
2074 2099 2.032680 AAGGTACGGTGCGCATTATT 57.967 45.000 15.91 0.50 0.00 1.40
2075 2100 2.032680 AGGTACGGTGCGCATTATTT 57.967 45.000 15.91 0.00 0.00 1.40
2078 2103 3.103007 GGTACGGTGCGCATTATTTTTC 58.897 45.455 15.91 0.00 0.00 2.29
2084 2109 5.921408 ACGGTGCGCATTATTTTTCTTTTAA 59.079 32.000 15.91 0.00 0.00 1.52
2428 2453 8.130307 ACATTAAAACTGAACACTTTTCATGC 57.870 30.769 10.58 0.00 29.64 4.06
2429 2454 7.224557 ACATTAAAACTGAACACTTTTCATGCC 59.775 33.333 10.58 0.00 29.64 4.40
2430 2455 3.733443 AACTGAACACTTTTCATGCCC 57.267 42.857 0.00 0.00 0.00 5.36
2431 2456 2.949447 ACTGAACACTTTTCATGCCCT 58.051 42.857 0.00 0.00 0.00 5.19
2432 2457 2.887152 ACTGAACACTTTTCATGCCCTC 59.113 45.455 0.00 0.00 0.00 4.30
2433 2458 3.152341 CTGAACACTTTTCATGCCCTCT 58.848 45.455 0.00 0.00 0.00 3.69
2434 2459 3.149196 TGAACACTTTTCATGCCCTCTC 58.851 45.455 0.00 0.00 0.00 3.20
2435 2460 2.957402 ACACTTTTCATGCCCTCTCA 57.043 45.000 0.00 0.00 0.00 3.27
2436 2461 2.787994 ACACTTTTCATGCCCTCTCAG 58.212 47.619 0.00 0.00 0.00 3.35
2437 2462 2.089980 CACTTTTCATGCCCTCTCAGG 58.910 52.381 0.00 0.00 34.30 3.86
2445 2470 4.063335 CCCTCTCAGGCCATCAGT 57.937 61.111 5.01 0.00 32.73 3.41
2446 2471 1.525923 CCCTCTCAGGCCATCAGTG 59.474 63.158 5.01 0.00 32.73 3.66
2447 2472 1.270414 CCCTCTCAGGCCATCAGTGT 61.270 60.000 5.01 0.00 32.73 3.55
2448 2473 0.177604 CCTCTCAGGCCATCAGTGTC 59.822 60.000 5.01 0.00 0.00 3.67
2449 2474 0.177604 CTCTCAGGCCATCAGTGTCC 59.822 60.000 5.01 0.00 0.00 4.02
2450 2475 1.153489 CTCAGGCCATCAGTGTCCG 60.153 63.158 5.01 0.00 0.00 4.79
2451 2476 1.892819 CTCAGGCCATCAGTGTCCGT 61.893 60.000 5.01 0.00 0.00 4.69
2452 2477 0.613572 TCAGGCCATCAGTGTCCGTA 60.614 55.000 5.01 0.00 0.00 4.02
2453 2478 0.179100 CAGGCCATCAGTGTCCGTAG 60.179 60.000 5.01 0.00 0.00 3.51
2454 2479 1.521681 GGCCATCAGTGTCCGTAGC 60.522 63.158 0.00 0.00 0.00 3.58
2455 2480 1.521681 GCCATCAGTGTCCGTAGCC 60.522 63.158 0.00 0.00 0.00 3.93
2456 2481 1.897423 CCATCAGTGTCCGTAGCCA 59.103 57.895 0.00 0.00 0.00 4.75
2457 2482 0.465705 CCATCAGTGTCCGTAGCCAT 59.534 55.000 0.00 0.00 0.00 4.40
2458 2483 1.539065 CCATCAGTGTCCGTAGCCATC 60.539 57.143 0.00 0.00 0.00 3.51
2459 2484 0.385751 ATCAGTGTCCGTAGCCATCG 59.614 55.000 0.00 0.00 0.00 3.84
2468 2493 2.438868 CGTAGCCATCGGATCATCAA 57.561 50.000 0.00 0.00 0.00 2.57
2469 2494 2.964740 CGTAGCCATCGGATCATCAAT 58.035 47.619 0.00 0.00 0.00 2.57
2470 2495 2.926200 CGTAGCCATCGGATCATCAATC 59.074 50.000 0.00 0.00 0.00 2.67
2471 2496 3.367806 CGTAGCCATCGGATCATCAATCT 60.368 47.826 0.00 0.00 34.56 2.40
2472 2497 3.784511 AGCCATCGGATCATCAATCTT 57.215 42.857 0.00 0.00 34.56 2.40
2473 2498 3.409570 AGCCATCGGATCATCAATCTTG 58.590 45.455 0.00 0.00 34.56 3.02
2474 2499 2.486982 GCCATCGGATCATCAATCTTGG 59.513 50.000 0.00 0.00 34.62 3.61
2475 2500 3.079578 CCATCGGATCATCAATCTTGGG 58.920 50.000 0.00 0.00 34.56 4.12
2476 2501 2.260844 TCGGATCATCAATCTTGGGC 57.739 50.000 0.00 0.00 34.56 5.36
2477 2502 1.490069 TCGGATCATCAATCTTGGGCA 59.510 47.619 0.00 0.00 34.56 5.36
2478 2503 2.107031 TCGGATCATCAATCTTGGGCAT 59.893 45.455 0.00 0.00 34.56 4.40
2479 2504 2.889045 CGGATCATCAATCTTGGGCATT 59.111 45.455 0.00 0.00 34.56 3.56
2480 2505 3.319972 CGGATCATCAATCTTGGGCATTT 59.680 43.478 0.00 0.00 34.56 2.32
2481 2506 4.202182 CGGATCATCAATCTTGGGCATTTT 60.202 41.667 0.00 0.00 34.56 1.82
2482 2507 5.295152 GGATCATCAATCTTGGGCATTTTC 58.705 41.667 0.00 0.00 34.56 2.29
2483 2508 4.374843 TCATCAATCTTGGGCATTTTCG 57.625 40.909 0.00 0.00 0.00 3.46
2484 2509 3.130869 TCATCAATCTTGGGCATTTTCGG 59.869 43.478 0.00 0.00 0.00 4.30
2485 2510 1.204467 TCAATCTTGGGCATTTTCGGC 59.796 47.619 0.00 0.00 0.00 5.54
2492 2517 2.473457 GGCATTTTCGGCCGTTAGA 58.527 52.632 27.15 10.38 42.39 2.10
2493 2518 1.021968 GGCATTTTCGGCCGTTAGAT 58.978 50.000 27.15 12.32 42.39 1.98
2494 2519 1.404035 GGCATTTTCGGCCGTTAGATT 59.596 47.619 27.15 3.53 42.39 2.40
2495 2520 2.159296 GGCATTTTCGGCCGTTAGATTT 60.159 45.455 27.15 1.78 42.39 2.17
2496 2521 3.065648 GGCATTTTCGGCCGTTAGATTTA 59.934 43.478 27.15 0.00 42.39 1.40
2497 2522 4.033019 GCATTTTCGGCCGTTAGATTTAC 58.967 43.478 27.15 4.02 0.00 2.01
2498 2523 4.201881 GCATTTTCGGCCGTTAGATTTACT 60.202 41.667 27.15 0.00 0.00 2.24
2499 2524 4.932268 TTTTCGGCCGTTAGATTTACTG 57.068 40.909 27.15 0.00 0.00 2.74
2500 2525 3.598019 TTCGGCCGTTAGATTTACTGT 57.402 42.857 27.15 0.00 0.00 3.55
2501 2526 3.155093 TCGGCCGTTAGATTTACTGTC 57.845 47.619 27.15 0.00 0.00 3.51
2502 2527 2.492881 TCGGCCGTTAGATTTACTGTCA 59.507 45.455 27.15 0.00 0.00 3.58
2503 2528 3.056678 TCGGCCGTTAGATTTACTGTCAA 60.057 43.478 27.15 0.00 0.00 3.18
2504 2529 3.869246 CGGCCGTTAGATTTACTGTCAAT 59.131 43.478 19.50 0.00 0.00 2.57
2505 2530 4.025979 CGGCCGTTAGATTTACTGTCAATC 60.026 45.833 19.50 6.60 0.00 2.67
2506 2531 4.025979 GGCCGTTAGATTTACTGTCAATCG 60.026 45.833 8.58 0.00 36.01 3.34
2507 2532 4.550255 GCCGTTAGATTTACTGTCAATCGC 60.550 45.833 8.58 3.41 36.01 4.58
2508 2533 4.804139 CCGTTAGATTTACTGTCAATCGCT 59.196 41.667 8.58 0.00 36.01 4.93
2509 2534 5.051641 CCGTTAGATTTACTGTCAATCGCTC 60.052 44.000 8.58 3.74 36.01 5.03
2510 2535 5.051641 CGTTAGATTTACTGTCAATCGCTCC 60.052 44.000 8.58 0.24 36.01 4.70
2511 2536 4.744795 AGATTTACTGTCAATCGCTCCT 57.255 40.909 8.58 0.00 36.01 3.69
2512 2537 4.688021 AGATTTACTGTCAATCGCTCCTC 58.312 43.478 8.58 0.00 36.01 3.71
2513 2538 3.953712 TTTACTGTCAATCGCTCCTCA 57.046 42.857 0.00 0.00 0.00 3.86
2514 2539 4.471904 TTTACTGTCAATCGCTCCTCAT 57.528 40.909 0.00 0.00 0.00 2.90
2515 2540 2.593346 ACTGTCAATCGCTCCTCATC 57.407 50.000 0.00 0.00 0.00 2.92
2516 2541 2.106566 ACTGTCAATCGCTCCTCATCT 58.893 47.619 0.00 0.00 0.00 2.90
2517 2542 2.159128 ACTGTCAATCGCTCCTCATCTG 60.159 50.000 0.00 0.00 0.00 2.90
2518 2543 1.137675 TGTCAATCGCTCCTCATCTGG 59.862 52.381 0.00 0.00 0.00 3.86
2519 2544 0.105593 TCAATCGCTCCTCATCTGGC 59.894 55.000 0.00 0.00 0.00 4.85
2520 2545 0.883814 CAATCGCTCCTCATCTGGCC 60.884 60.000 0.00 0.00 0.00 5.36
2521 2546 1.053264 AATCGCTCCTCATCTGGCCT 61.053 55.000 3.32 0.00 0.00 5.19
2522 2547 1.470996 ATCGCTCCTCATCTGGCCTC 61.471 60.000 3.32 0.00 0.00 4.70
2523 2548 2.420890 GCTCCTCATCTGGCCTCG 59.579 66.667 3.32 0.00 0.00 4.63
2524 2549 2.430610 GCTCCTCATCTGGCCTCGT 61.431 63.158 3.32 0.00 0.00 4.18
2525 2550 1.965754 GCTCCTCATCTGGCCTCGTT 61.966 60.000 3.32 0.00 0.00 3.85
2526 2551 0.103937 CTCCTCATCTGGCCTCGTTC 59.896 60.000 3.32 0.00 0.00 3.95
2527 2552 1.227089 CCTCATCTGGCCTCGTTCG 60.227 63.158 3.32 0.00 0.00 3.95
2528 2553 1.513158 CTCATCTGGCCTCGTTCGT 59.487 57.895 3.32 0.00 0.00 3.85
2529 2554 0.526524 CTCATCTGGCCTCGTTCGTC 60.527 60.000 3.32 0.00 0.00 4.20
2530 2555 1.215382 CATCTGGCCTCGTTCGTCA 59.785 57.895 3.32 0.00 0.00 4.35
2531 2556 0.179100 CATCTGGCCTCGTTCGTCAT 60.179 55.000 3.32 0.00 0.00 3.06
2532 2557 0.179100 ATCTGGCCTCGTTCGTCATG 60.179 55.000 3.32 0.00 0.00 3.07
2533 2558 1.811266 CTGGCCTCGTTCGTCATGG 60.811 63.158 3.32 0.00 0.00 3.66
2534 2559 2.511600 GGCCTCGTTCGTCATGGG 60.512 66.667 0.00 0.00 0.00 4.00
2535 2560 3.195698 GCCTCGTTCGTCATGGGC 61.196 66.667 0.00 0.00 0.00 5.36
2536 2561 2.511600 CCTCGTTCGTCATGGGCC 60.512 66.667 0.00 0.00 0.00 5.80
2537 2562 2.885644 CTCGTTCGTCATGGGCCG 60.886 66.667 0.00 0.00 0.00 6.13
2540 2565 3.499737 GTTCGTCATGGGCCGCTG 61.500 66.667 0.00 0.00 0.00 5.18
2544 2569 4.479993 GTCATGGGCCGCTGCTCT 62.480 66.667 0.44 0.00 39.40 4.09
2545 2570 4.478371 TCATGGGCCGCTGCTCTG 62.478 66.667 0.44 0.00 39.40 3.35
2552 2577 4.749310 CCGCTGCTCTGGTCGCTT 62.749 66.667 0.00 0.00 0.00 4.68
2553 2578 2.740055 CGCTGCTCTGGTCGCTTT 60.740 61.111 0.00 0.00 0.00 3.51
2554 2579 2.320587 CGCTGCTCTGGTCGCTTTT 61.321 57.895 0.00 0.00 0.00 2.27
2555 2580 1.845809 CGCTGCTCTGGTCGCTTTTT 61.846 55.000 0.00 0.00 0.00 1.94
2556 2581 0.110010 GCTGCTCTGGTCGCTTTTTC 60.110 55.000 0.00 0.00 0.00 2.29
2557 2582 0.519077 CTGCTCTGGTCGCTTTTTCC 59.481 55.000 0.00 0.00 0.00 3.13
2558 2583 1.227999 TGCTCTGGTCGCTTTTTCCG 61.228 55.000 0.00 0.00 0.00 4.30
2559 2584 1.912371 GCTCTGGTCGCTTTTTCCGG 61.912 60.000 0.00 0.00 0.00 5.14
2560 2585 0.602905 CTCTGGTCGCTTTTTCCGGT 60.603 55.000 0.00 0.00 0.00 5.28
2561 2586 0.882927 TCTGGTCGCTTTTTCCGGTG 60.883 55.000 0.00 0.00 0.00 4.94
2562 2587 1.153127 TGGTCGCTTTTTCCGGTGT 60.153 52.632 0.00 0.00 0.00 4.16
2563 2588 1.161563 TGGTCGCTTTTTCCGGTGTC 61.162 55.000 0.00 0.00 0.00 3.67
2564 2589 0.883370 GGTCGCTTTTTCCGGTGTCT 60.883 55.000 0.00 0.00 0.00 3.41
2565 2590 0.511653 GTCGCTTTTTCCGGTGTCTC 59.488 55.000 0.00 0.00 0.00 3.36
2566 2591 0.105224 TCGCTTTTTCCGGTGTCTCA 59.895 50.000 0.00 0.00 0.00 3.27
2567 2592 0.512952 CGCTTTTTCCGGTGTCTCAG 59.487 55.000 0.00 0.00 0.00 3.35
2568 2593 1.872237 CGCTTTTTCCGGTGTCTCAGA 60.872 52.381 0.00 0.00 0.00 3.27
2569 2594 2.427506 GCTTTTTCCGGTGTCTCAGAT 58.572 47.619 0.00 0.00 0.00 2.90
2570 2595 2.814336 GCTTTTTCCGGTGTCTCAGATT 59.186 45.455 0.00 0.00 0.00 2.40
2571 2596 4.000988 GCTTTTTCCGGTGTCTCAGATTA 58.999 43.478 0.00 0.00 0.00 1.75
2572 2597 4.454504 GCTTTTTCCGGTGTCTCAGATTAA 59.545 41.667 0.00 0.00 0.00 1.40
2573 2598 5.048991 GCTTTTTCCGGTGTCTCAGATTAAA 60.049 40.000 0.00 0.00 0.00 1.52
2574 2599 6.349363 GCTTTTTCCGGTGTCTCAGATTAAAT 60.349 38.462 0.00 0.00 0.00 1.40
2575 2600 7.519032 TTTTTCCGGTGTCTCAGATTAAATT 57.481 32.000 0.00 0.00 0.00 1.82
2576 2601 6.494893 TTTCCGGTGTCTCAGATTAAATTG 57.505 37.500 0.00 0.00 0.00 2.32
2577 2602 4.513442 TCCGGTGTCTCAGATTAAATTGG 58.487 43.478 0.00 0.00 0.00 3.16
2578 2603 3.627577 CCGGTGTCTCAGATTAAATTGGG 59.372 47.826 0.00 0.00 0.00 4.12
2579 2604 3.065371 CGGTGTCTCAGATTAAATTGGGC 59.935 47.826 0.00 0.00 0.00 5.36
2580 2605 3.381590 GGTGTCTCAGATTAAATTGGGCC 59.618 47.826 0.00 0.00 0.00 5.80
2581 2606 4.273318 GTGTCTCAGATTAAATTGGGCCT 58.727 43.478 4.53 0.00 0.00 5.19
2582 2607 5.437060 GTGTCTCAGATTAAATTGGGCCTA 58.563 41.667 4.53 0.00 0.00 3.93
2583 2608 5.885912 GTGTCTCAGATTAAATTGGGCCTAA 59.114 40.000 3.11 3.11 0.00 2.69
2584 2609 5.885912 TGTCTCAGATTAAATTGGGCCTAAC 59.114 40.000 2.51 0.00 0.00 2.34
2585 2610 5.007724 GTCTCAGATTAAATTGGGCCTAACG 59.992 44.000 2.51 0.00 0.00 3.18
2586 2611 4.204012 TCAGATTAAATTGGGCCTAACGG 58.796 43.478 2.51 0.00 0.00 4.44
2587 2612 3.317993 CAGATTAAATTGGGCCTAACGGG 59.682 47.826 2.51 0.00 38.36 5.28
2596 2621 4.408821 CCTAACGGGCCTGCAGCA 62.409 66.667 12.89 0.00 46.50 4.41
2597 2622 3.127533 CTAACGGGCCTGCAGCAC 61.128 66.667 12.89 4.08 46.50 4.40
2598 2623 4.715523 TAACGGGCCTGCAGCACC 62.716 66.667 12.89 11.95 44.64 5.01
2605 2630 3.736224 CCTGCAGCACCATCCCCT 61.736 66.667 8.66 0.00 0.00 4.79
2606 2631 2.357836 CTGCAGCACCATCCCCTT 59.642 61.111 0.00 0.00 0.00 3.95
2607 2632 1.751927 CTGCAGCACCATCCCCTTC 60.752 63.158 0.00 0.00 0.00 3.46
2608 2633 2.825836 GCAGCACCATCCCCTTCG 60.826 66.667 0.00 0.00 0.00 3.79
2609 2634 2.671070 CAGCACCATCCCCTTCGT 59.329 61.111 0.00 0.00 0.00 3.85
2610 2635 1.746615 CAGCACCATCCCCTTCGTG 60.747 63.158 0.00 0.00 0.00 4.35
2611 2636 1.918293 AGCACCATCCCCTTCGTGA 60.918 57.895 0.00 0.00 0.00 4.35
2612 2637 1.002624 GCACCATCCCCTTCGTGAA 60.003 57.895 0.00 0.00 0.00 3.18
2613 2638 1.026718 GCACCATCCCCTTCGTGAAG 61.027 60.000 2.57 2.57 38.14 3.02
2614 2639 1.026718 CACCATCCCCTTCGTGAAGC 61.027 60.000 4.05 0.00 37.11 3.86
2615 2640 1.452108 CCATCCCCTTCGTGAAGCC 60.452 63.158 4.05 0.00 37.11 4.35
2616 2641 1.299648 CATCCCCTTCGTGAAGCCA 59.700 57.895 4.05 0.00 37.11 4.75
2617 2642 1.026718 CATCCCCTTCGTGAAGCCAC 61.027 60.000 4.05 0.00 39.86 5.01
2618 2643 2.198304 ATCCCCTTCGTGAAGCCACC 62.198 60.000 4.05 0.00 40.12 4.61
2619 2644 2.742372 CCCTTCGTGAAGCCACCG 60.742 66.667 4.05 0.00 40.12 4.94
2620 2645 2.030562 CCTTCGTGAAGCCACCGT 59.969 61.111 4.05 0.00 40.12 4.83
2621 2646 1.597027 CCTTCGTGAAGCCACCGTT 60.597 57.895 4.05 0.00 40.12 4.44
2622 2647 1.164041 CCTTCGTGAAGCCACCGTTT 61.164 55.000 4.05 0.00 40.12 3.60
2623 2648 0.661020 CTTCGTGAAGCCACCGTTTT 59.339 50.000 0.00 0.00 40.12 2.43
2624 2649 0.378962 TTCGTGAAGCCACCGTTTTG 59.621 50.000 0.00 0.00 40.12 2.44
2625 2650 0.745128 TCGTGAAGCCACCGTTTTGT 60.745 50.000 0.00 0.00 40.12 2.83
2626 2651 0.099791 CGTGAAGCCACCGTTTTGTT 59.900 50.000 0.00 0.00 40.12 2.83
2627 2652 1.835121 GTGAAGCCACCGTTTTGTTC 58.165 50.000 0.00 0.00 37.33 3.18
2628 2653 0.741915 TGAAGCCACCGTTTTGTTCC 59.258 50.000 0.00 0.00 0.00 3.62
2629 2654 0.031585 GAAGCCACCGTTTTGTTCCC 59.968 55.000 0.00 0.00 0.00 3.97
2630 2655 0.684805 AAGCCACCGTTTTGTTCCCA 60.685 50.000 0.00 0.00 0.00 4.37
2631 2656 0.684805 AGCCACCGTTTTGTTCCCAA 60.685 50.000 0.00 0.00 0.00 4.12
2632 2657 0.249280 GCCACCGTTTTGTTCCCAAG 60.249 55.000 0.00 0.00 0.00 3.61
2633 2658 1.394618 CCACCGTTTTGTTCCCAAGA 58.605 50.000 0.00 0.00 0.00 3.02
2634 2659 1.066454 CCACCGTTTTGTTCCCAAGAC 59.934 52.381 0.00 0.00 33.51 3.01
2635 2660 1.066454 CACCGTTTTGTTCCCAAGACC 59.934 52.381 0.00 0.00 33.32 3.85
2636 2661 1.341187 ACCGTTTTGTTCCCAAGACCA 60.341 47.619 0.00 0.00 33.32 4.02
2637 2662 1.751924 CCGTTTTGTTCCCAAGACCAA 59.248 47.619 0.00 0.00 33.32 3.67
2638 2663 2.166664 CCGTTTTGTTCCCAAGACCAAA 59.833 45.455 0.00 0.00 33.32 3.28
2639 2664 3.183754 CGTTTTGTTCCCAAGACCAAAC 58.816 45.455 0.00 0.00 33.32 2.93
2640 2665 3.183754 GTTTTGTTCCCAAGACCAAACG 58.816 45.455 0.00 0.00 31.28 3.60
2641 2666 0.741915 TTGTTCCCAAGACCAAACGC 59.258 50.000 0.00 0.00 0.00 4.84
2642 2667 1.104577 TGTTCCCAAGACCAAACGCC 61.105 55.000 0.00 0.00 0.00 5.68
2643 2668 0.822121 GTTCCCAAGACCAAACGCCT 60.822 55.000 0.00 0.00 0.00 5.52
2644 2669 0.536460 TTCCCAAGACCAAACGCCTC 60.536 55.000 0.00 0.00 0.00 4.70
2645 2670 1.971695 CCCAAGACCAAACGCCTCC 60.972 63.158 0.00 0.00 0.00 4.30
2646 2671 1.971695 CCAAGACCAAACGCCTCCC 60.972 63.158 0.00 0.00 0.00 4.30
2647 2672 1.228124 CAAGACCAAACGCCTCCCA 60.228 57.895 0.00 0.00 0.00 4.37
2648 2673 1.228154 AAGACCAAACGCCTCCCAC 60.228 57.895 0.00 0.00 0.00 4.61
2649 2674 1.990160 AAGACCAAACGCCTCCCACA 61.990 55.000 0.00 0.00 0.00 4.17
2650 2675 2.203294 ACCAAACGCCTCCCACAC 60.203 61.111 0.00 0.00 0.00 3.82
2651 2676 2.983592 CCAAACGCCTCCCACACC 60.984 66.667 0.00 0.00 0.00 4.16
2652 2677 2.983592 CAAACGCCTCCCACACCC 60.984 66.667 0.00 0.00 0.00 4.61
2653 2678 3.175710 AAACGCCTCCCACACCCT 61.176 61.111 0.00 0.00 0.00 4.34
2654 2679 2.763645 AAACGCCTCCCACACCCTT 61.764 57.895 0.00 0.00 0.00 3.95
2655 2680 2.692273 AAACGCCTCCCACACCCTTC 62.692 60.000 0.00 0.00 0.00 3.46
2656 2681 4.760047 CGCCTCCCACACCCTTCG 62.760 72.222 0.00 0.00 0.00 3.79
2658 2683 4.410400 CCTCCCACACCCTTCGCC 62.410 72.222 0.00 0.00 0.00 5.54
2659 2684 3.322466 CTCCCACACCCTTCGCCT 61.322 66.667 0.00 0.00 0.00 5.52
2660 2685 3.612247 CTCCCACACCCTTCGCCTG 62.612 68.421 0.00 0.00 0.00 4.85
2661 2686 4.722700 CCCACACCCTTCGCCTGG 62.723 72.222 0.00 0.00 0.00 4.45
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 6.003234 TGACTTCACAACGAAAAAGACAAA 57.997 33.333 0.00 0.00 31.71 2.83
1 2 5.614923 TGACTTCACAACGAAAAAGACAA 57.385 34.783 0.00 0.00 31.71 3.18
3 4 5.909926 GTTGACTTCACAACGAAAAAGAC 57.090 39.130 0.00 0.00 40.17 3.01
12 13 4.870221 AAACCTACGTTGACTTCACAAC 57.130 40.909 0.00 0.00 44.31 3.32
13 14 5.883503 AAAAACCTACGTTGACTTCACAA 57.116 34.783 0.00 0.00 30.72 3.33
50 51 8.750298 ACTTGACTTACTTGCACACTAGTATAT 58.250 33.333 0.00 0.00 34.71 0.86
51 52 8.118976 ACTTGACTTACTTGCACACTAGTATA 57.881 34.615 0.00 0.00 34.71 1.47
52 53 6.994221 ACTTGACTTACTTGCACACTAGTAT 58.006 36.000 0.00 0.00 34.71 2.12
53 54 6.401047 ACTTGACTTACTTGCACACTAGTA 57.599 37.500 0.00 0.00 33.72 1.82
54 55 5.277857 ACTTGACTTACTTGCACACTAGT 57.722 39.130 0.00 0.00 35.90 2.57
55 56 6.604735 AAACTTGACTTACTTGCACACTAG 57.395 37.500 0.00 0.00 0.00 2.57
56 57 8.671384 ATTAAACTTGACTTACTTGCACACTA 57.329 30.769 0.00 0.00 0.00 2.74
57 58 6.995511 TTAAACTTGACTTACTTGCACACT 57.004 33.333 0.00 0.00 0.00 3.55
58 59 7.639945 AGATTAAACTTGACTTACTTGCACAC 58.360 34.615 0.00 0.00 0.00 3.82
59 60 7.801716 AGATTAAACTTGACTTACTTGCACA 57.198 32.000 0.00 0.00 0.00 4.57
136 137 7.230712 TCTCGCATGTATATACACCCTATATGG 59.769 40.741 17.69 5.46 39.30 2.74
137 138 8.166422 TCTCGCATGTATATACACCCTATATG 57.834 38.462 17.69 11.11 39.30 1.78
138 139 7.040340 GCTCTCGCATGTATATACACCCTATAT 60.040 40.741 17.69 0.00 39.30 0.86
139 140 6.262496 GCTCTCGCATGTATATACACCCTATA 59.738 42.308 17.69 2.76 39.30 1.31
140 141 5.067936 GCTCTCGCATGTATATACACCCTAT 59.932 44.000 17.69 0.00 39.30 2.57
141 142 4.398358 GCTCTCGCATGTATATACACCCTA 59.602 45.833 17.69 4.07 39.30 3.53
142 143 3.193691 GCTCTCGCATGTATATACACCCT 59.806 47.826 17.69 0.00 39.30 4.34
143 144 3.512680 GCTCTCGCATGTATATACACCC 58.487 50.000 17.69 10.44 39.30 4.61
144 145 3.056821 TGGCTCTCGCATGTATATACACC 60.057 47.826 17.69 11.85 39.30 4.16
145 146 4.174411 TGGCTCTCGCATGTATATACAC 57.826 45.455 17.69 5.64 39.30 2.90
146 147 4.864704 TTGGCTCTCGCATGTATATACA 57.135 40.909 17.65 17.65 40.98 2.29
147 148 4.627467 CCTTTGGCTCTCGCATGTATATAC 59.373 45.833 5.89 5.89 38.10 1.47
148 149 4.322725 CCCTTTGGCTCTCGCATGTATATA 60.323 45.833 0.00 0.00 38.10 0.86
149 150 3.557898 CCCTTTGGCTCTCGCATGTATAT 60.558 47.826 0.00 0.00 38.10 0.86
150 151 2.224281 CCCTTTGGCTCTCGCATGTATA 60.224 50.000 0.00 0.00 38.10 1.47
151 152 1.475751 CCCTTTGGCTCTCGCATGTAT 60.476 52.381 0.00 0.00 38.10 2.29
152 153 0.107703 CCCTTTGGCTCTCGCATGTA 60.108 55.000 0.00 0.00 38.10 2.29
153 154 1.377725 CCCTTTGGCTCTCGCATGT 60.378 57.895 0.00 0.00 38.10 3.21
154 155 0.107703 TACCCTTTGGCTCTCGCATG 60.108 55.000 0.00 0.00 38.10 4.06
155 156 0.839946 ATACCCTTTGGCTCTCGCAT 59.160 50.000 0.00 0.00 38.10 4.73
156 157 0.618458 AATACCCTTTGGCTCTCGCA 59.382 50.000 0.00 0.00 38.10 5.10
157 158 1.671328 GAAATACCCTTTGGCTCTCGC 59.329 52.381 0.00 0.00 33.59 5.03
158 159 2.289565 GGAAATACCCTTTGGCTCTCG 58.710 52.381 0.00 0.00 33.59 4.04
170 171 7.750947 ATGGACTATATGGTAGGGAAATACC 57.249 40.000 0.00 0.00 44.73 2.73
171 172 7.980099 CGAATGGACTATATGGTAGGGAAATAC 59.020 40.741 0.00 0.00 0.00 1.89
172 173 7.676893 ACGAATGGACTATATGGTAGGGAAATA 59.323 37.037 0.00 0.00 0.00 1.40
173 174 6.500751 ACGAATGGACTATATGGTAGGGAAAT 59.499 38.462 0.00 0.00 0.00 2.17
174 175 5.842328 ACGAATGGACTATATGGTAGGGAAA 59.158 40.000 0.00 0.00 0.00 3.13
175 176 5.399991 ACGAATGGACTATATGGTAGGGAA 58.600 41.667 0.00 0.00 0.00 3.97
176 177 5.006896 ACGAATGGACTATATGGTAGGGA 57.993 43.478 0.00 0.00 0.00 4.20
177 178 5.337330 GGAACGAATGGACTATATGGTAGGG 60.337 48.000 0.00 0.00 0.00 3.53
178 179 5.245301 TGGAACGAATGGACTATATGGTAGG 59.755 44.000 0.00 0.00 0.00 3.18
179 180 6.015350 ACTGGAACGAATGGACTATATGGTAG 60.015 42.308 0.00 0.00 0.00 3.18
180 181 5.836898 ACTGGAACGAATGGACTATATGGTA 59.163 40.000 0.00 0.00 0.00 3.25
181 182 4.654262 ACTGGAACGAATGGACTATATGGT 59.346 41.667 0.00 0.00 0.00 3.55
182 183 5.215252 ACTGGAACGAATGGACTATATGG 57.785 43.478 0.00 0.00 0.00 2.74
183 184 5.856986 CGTACTGGAACGAATGGACTATATG 59.143 44.000 0.00 0.00 45.68 1.78
184 185 5.048224 CCGTACTGGAACGAATGGACTATAT 60.048 44.000 6.41 0.00 45.68 0.86
185 186 4.276678 CCGTACTGGAACGAATGGACTATA 59.723 45.833 6.41 0.00 45.68 1.31
186 187 3.067742 CCGTACTGGAACGAATGGACTAT 59.932 47.826 6.41 0.00 45.68 2.12
187 188 2.424601 CCGTACTGGAACGAATGGACTA 59.575 50.000 6.41 0.00 45.68 2.59
188 189 1.203994 CCGTACTGGAACGAATGGACT 59.796 52.381 6.41 0.00 45.68 3.85
189 190 1.203052 TCCGTACTGGAACGAATGGAC 59.797 52.381 6.41 0.00 46.38 4.02
190 191 1.548081 TCCGTACTGGAACGAATGGA 58.452 50.000 6.41 0.00 46.38 3.41
200 201 1.553706 ACCCTAACACTCCGTACTGG 58.446 55.000 0.00 0.00 40.09 4.00
201 202 3.323243 CAAACCCTAACACTCCGTACTG 58.677 50.000 0.00 0.00 0.00 2.74
202 203 2.289257 GCAAACCCTAACACTCCGTACT 60.289 50.000 0.00 0.00 0.00 2.73
203 204 2.071540 GCAAACCCTAACACTCCGTAC 58.928 52.381 0.00 0.00 0.00 3.67
204 205 1.972795 AGCAAACCCTAACACTCCGTA 59.027 47.619 0.00 0.00 0.00 4.02
205 206 0.763035 AGCAAACCCTAACACTCCGT 59.237 50.000 0.00 0.00 0.00 4.69
206 207 2.618053 CTAGCAAACCCTAACACTCCG 58.382 52.381 0.00 0.00 0.00 4.63
207 208 2.570302 TCCTAGCAAACCCTAACACTCC 59.430 50.000 0.00 0.00 0.00 3.85
208 209 3.975168 TCCTAGCAAACCCTAACACTC 57.025 47.619 0.00 0.00 0.00 3.51
209 210 3.559384 GCTTCCTAGCAAACCCTAACACT 60.559 47.826 0.00 0.00 46.95 3.55
210 211 2.747989 GCTTCCTAGCAAACCCTAACAC 59.252 50.000 0.00 0.00 46.95 3.32
211 212 3.067684 GCTTCCTAGCAAACCCTAACA 57.932 47.619 0.00 0.00 46.95 2.41
223 224 2.480419 CTGTTTGTCAACGGCTTCCTAG 59.520 50.000 0.00 0.00 35.40 3.02
224 225 2.158871 ACTGTTTGTCAACGGCTTCCTA 60.159 45.455 0.00 0.00 42.42 2.94
225 226 1.308998 CTGTTTGTCAACGGCTTCCT 58.691 50.000 0.00 0.00 35.40 3.36
226 227 1.021968 ACTGTTTGTCAACGGCTTCC 58.978 50.000 0.00 0.00 42.42 3.46
227 228 2.450160 CAACTGTTTGTCAACGGCTTC 58.550 47.619 0.00 0.00 42.42 3.86
228 229 1.469079 GCAACTGTTTGTCAACGGCTT 60.469 47.619 0.00 0.00 42.42 4.35
229 230 0.100503 GCAACTGTTTGTCAACGGCT 59.899 50.000 0.00 0.00 42.42 5.52
230 231 0.179150 TGCAACTGTTTGTCAACGGC 60.179 50.000 0.00 0.00 42.42 5.68
231 232 1.544686 GTGCAACTGTTTGTCAACGG 58.455 50.000 0.00 0.00 44.04 4.44
244 245 8.615211 TCAAGATTTACATCATCATAGTGCAAC 58.385 33.333 0.00 0.00 0.00 4.17
245 246 8.735692 TCAAGATTTACATCATCATAGTGCAA 57.264 30.769 0.00 0.00 0.00 4.08
246 247 8.913487 ATCAAGATTTACATCATCATAGTGCA 57.087 30.769 0.00 0.00 0.00 4.57
259 260 9.460019 TGGTCATGATTTGTATCAAGATTTACA 57.540 29.630 0.00 0.00 43.67 2.41
260 261 9.722056 GTGGTCATGATTTGTATCAAGATTTAC 57.278 33.333 0.00 0.00 43.67 2.01
261 262 9.460019 TGTGGTCATGATTTGTATCAAGATTTA 57.540 29.630 0.00 0.00 43.67 1.40
262 263 8.352137 TGTGGTCATGATTTGTATCAAGATTT 57.648 30.769 0.00 0.00 43.67 2.17
263 264 7.943079 TGTGGTCATGATTTGTATCAAGATT 57.057 32.000 0.00 0.00 43.67 2.40
264 265 7.613022 ACTTGTGGTCATGATTTGTATCAAGAT 59.387 33.333 19.70 0.00 43.67 2.40
265 266 6.942005 ACTTGTGGTCATGATTTGTATCAAGA 59.058 34.615 19.70 0.00 43.67 3.02
266 267 7.149569 ACTTGTGGTCATGATTTGTATCAAG 57.850 36.000 0.00 9.68 43.67 3.02
267 268 7.523293 AACTTGTGGTCATGATTTGTATCAA 57.477 32.000 0.00 0.00 43.67 2.57
268 269 8.806429 ATAACTTGTGGTCATGATTTGTATCA 57.194 30.769 0.00 0.00 44.52 2.15
269 270 9.722056 GAATAACTTGTGGTCATGATTTGTATC 57.278 33.333 0.00 0.00 0.00 2.24
270 271 8.397906 CGAATAACTTGTGGTCATGATTTGTAT 58.602 33.333 0.00 0.00 0.00 2.29
271 272 7.604545 TCGAATAACTTGTGGTCATGATTTGTA 59.395 33.333 0.00 0.00 0.00 2.41
272 273 6.429692 TCGAATAACTTGTGGTCATGATTTGT 59.570 34.615 0.00 0.00 0.00 2.83
273 274 6.841119 TCGAATAACTTGTGGTCATGATTTG 58.159 36.000 0.00 0.00 0.00 2.32
274 275 7.447374 TTCGAATAACTTGTGGTCATGATTT 57.553 32.000 0.00 0.00 0.00 2.17
275 276 7.447374 TTTCGAATAACTTGTGGTCATGATT 57.553 32.000 0.00 0.00 0.00 2.57
276 277 7.554118 AGATTTCGAATAACTTGTGGTCATGAT 59.446 33.333 0.00 0.00 0.00 2.45
277 278 6.878923 AGATTTCGAATAACTTGTGGTCATGA 59.121 34.615 0.00 0.00 0.00 3.07
278 279 7.076842 AGATTTCGAATAACTTGTGGTCATG 57.923 36.000 0.00 0.00 0.00 3.07
279 280 8.830580 CATAGATTTCGAATAACTTGTGGTCAT 58.169 33.333 0.00 0.00 0.00 3.06
280 281 8.038351 TCATAGATTTCGAATAACTTGTGGTCA 58.962 33.333 0.00 0.00 0.00 4.02
281 282 8.420374 TCATAGATTTCGAATAACTTGTGGTC 57.580 34.615 0.00 0.00 0.00 4.02
282 283 8.786826 TTCATAGATTTCGAATAACTTGTGGT 57.213 30.769 0.00 0.00 0.00 4.16
283 284 9.869844 GATTCATAGATTTCGAATAACTTGTGG 57.130 33.333 0.00 0.00 29.67 4.17
303 304 9.896645 ACATGAAGTTGATGTTACTAGATTCAT 57.103 29.630 1.71 0.00 29.39 2.57
304 305 9.371136 GACATGAAGTTGATGTTACTAGATTCA 57.629 33.333 9.42 0.00 34.10 2.57
305 306 9.371136 TGACATGAAGTTGATGTTACTAGATTC 57.629 33.333 9.42 0.00 34.10 2.52
306 307 9.155975 GTGACATGAAGTTGATGTTACTAGATT 57.844 33.333 18.76 0.00 37.35 2.40
307 308 8.314021 TGTGACATGAAGTTGATGTTACTAGAT 58.686 33.333 23.77 0.00 39.71 1.98
308 309 7.666623 TGTGACATGAAGTTGATGTTACTAGA 58.333 34.615 23.77 7.91 39.71 2.43
309 310 7.889589 TGTGACATGAAGTTGATGTTACTAG 57.110 36.000 23.77 0.00 39.71 2.57
310 311 9.936759 TTATGTGACATGAAGTTGATGTTACTA 57.063 29.630 23.77 14.45 39.71 1.82
311 312 8.846943 TTATGTGACATGAAGTTGATGTTACT 57.153 30.769 23.77 15.05 39.71 2.24
312 313 9.546909 CTTTATGTGACATGAAGTTGATGTTAC 57.453 33.333 19.08 19.08 39.54 2.50
313 314 8.236586 GCTTTATGTGACATGAAGTTGATGTTA 58.763 33.333 24.80 2.56 34.10 2.41
314 315 7.086376 GCTTTATGTGACATGAAGTTGATGTT 58.914 34.615 24.80 0.00 34.10 2.71
315 316 6.207221 TGCTTTATGTGACATGAAGTTGATGT 59.793 34.615 24.80 7.75 36.73 3.06
316 317 6.525628 GTGCTTTATGTGACATGAAGTTGATG 59.474 38.462 24.80 0.26 0.00 3.07
317 318 6.207221 TGTGCTTTATGTGACATGAAGTTGAT 59.793 34.615 24.80 0.00 0.00 2.57
318 319 5.530543 TGTGCTTTATGTGACATGAAGTTGA 59.469 36.000 24.80 11.37 0.00 3.18
319 320 5.761003 TGTGCTTTATGTGACATGAAGTTG 58.239 37.500 24.80 7.48 0.00 3.16
320 321 6.579666 ATGTGCTTTATGTGACATGAAGTT 57.420 33.333 24.80 10.11 0.00 2.66
321 322 7.686438 TTATGTGCTTTATGTGACATGAAGT 57.314 32.000 24.80 12.12 31.56 3.01
356 357 4.794169 ACAACCGTTTGATCAGCAATTAC 58.206 39.130 0.00 0.00 36.15 1.89
362 363 4.678509 TTGATACAACCGTTTGATCAGC 57.321 40.909 0.00 0.00 34.05 4.26
451 452 1.803366 GAGTTGGACGACTGGACGGT 61.803 60.000 0.00 0.00 37.61 4.83
520 521 7.984422 TTTTATCCATGATAGTATGTGCTGG 57.016 36.000 0.00 0.00 0.00 4.85
569 583 5.912360 AGGAAAGAAACGTAGGTTTTACG 57.088 39.130 14.28 5.29 46.04 3.18
570 584 7.923888 AGAAAGGAAAGAAACGTAGGTTTTAC 58.076 34.615 14.28 3.71 46.04 2.01
571 585 7.769970 TGAGAAAGGAAAGAAACGTAGGTTTTA 59.230 33.333 14.28 0.00 46.04 1.52
572 586 6.600427 TGAGAAAGGAAAGAAACGTAGGTTTT 59.400 34.615 14.28 0.00 46.04 2.43
600 614 4.036027 CGAAATTCAGGTGGGAGATGATTG 59.964 45.833 0.00 0.00 0.00 2.67
612 626 1.674322 CACCCCGCGAAATTCAGGT 60.674 57.895 8.23 0.00 0.00 4.00
655 669 1.032014 GCTGACTTGGCCTGTTTTGA 58.968 50.000 3.32 0.00 0.00 2.69
663 677 3.488090 GTACGCGCTGACTTGGCC 61.488 66.667 5.73 0.00 0.00 5.36
668 682 2.649331 AACTTATGTACGCGCTGACT 57.351 45.000 5.73 0.00 0.00 3.41
675 689 8.773136 CAAAATTCTTACGAAACTTATGTACGC 58.227 33.333 0.00 0.00 31.91 4.42
748 763 2.105128 CTCGGTGGAGATGGTCGC 59.895 66.667 0.00 0.00 43.27 5.19
785 800 4.171103 GGGTGCCCGCGTAAGGAT 62.171 66.667 4.92 0.00 38.28 3.24
840 855 2.665649 TCTCACTCACACAAACACGT 57.334 45.000 0.00 0.00 0.00 4.49
889 904 0.539438 ATAGAGCGAGCTAGCAGGCT 60.539 55.000 26.44 26.44 46.11 4.58
892 907 5.277779 GGATACATATAGAGCGAGCTAGCAG 60.278 48.000 21.36 11.68 40.15 4.24
893 908 4.576873 GGATACATATAGAGCGAGCTAGCA 59.423 45.833 21.36 0.19 40.15 3.49
922 937 2.119801 ATGGTGGCTGATCACTTGAC 57.880 50.000 0.00 0.00 37.75 3.18
978 993 0.246360 TTGACGATCGGCACAGATGT 59.754 50.000 26.36 0.00 29.74 3.06
994 1011 4.277239 CGAGGACGCCATTGTTGA 57.723 55.556 0.00 0.00 0.00 3.18
1222 1240 5.931724 TGACAGTCGAACATGTATTGACAAT 59.068 36.000 20.50 5.87 39.59 2.71
1223 1241 5.293560 TGACAGTCGAACATGTATTGACAA 58.706 37.500 20.50 0.00 39.59 3.18
1225 1243 4.327357 CCTGACAGTCGAACATGTATTGAC 59.673 45.833 14.05 14.05 0.00 3.18
1226 1244 4.021456 ACCTGACAGTCGAACATGTATTGA 60.021 41.667 0.00 0.00 0.00 2.57
1227 1245 4.245660 ACCTGACAGTCGAACATGTATTG 58.754 43.478 0.00 0.00 0.00 1.90
1228 1246 4.537135 ACCTGACAGTCGAACATGTATT 57.463 40.909 0.00 0.00 0.00 1.89
1229 1247 5.127194 ACATACCTGACAGTCGAACATGTAT 59.873 40.000 0.00 0.00 0.00 2.29
1230 1248 4.461431 ACATACCTGACAGTCGAACATGTA 59.539 41.667 0.00 0.00 0.00 2.29
1231 1249 3.258372 ACATACCTGACAGTCGAACATGT 59.742 43.478 0.93 0.00 0.00 3.21
1232 1250 3.614176 CACATACCTGACAGTCGAACATG 59.386 47.826 0.93 0.00 0.00 3.21
1233 1251 3.849911 CACATACCTGACAGTCGAACAT 58.150 45.455 0.93 0.00 0.00 2.71
1327 1345 1.005630 CGCCGATCATCTTCCTCCC 60.006 63.158 0.00 0.00 0.00 4.30
1426 1444 8.925700 GCAAAAATAAAATGAGAAACCACTAGG 58.074 33.333 0.00 0.00 42.21 3.02
1538 1563 3.091545 GACTGAATCCAAGGATTTGCCA 58.908 45.455 15.07 8.30 43.98 4.92
1619 1644 0.388520 TGACGATGAACACGAGGCAG 60.389 55.000 0.00 0.00 34.70 4.85
1623 1648 1.633561 AGCATGACGATGAACACGAG 58.366 50.000 0.00 0.00 34.70 4.18
1643 1668 3.906846 ACTTGGTGAGTGAGAAAGAGGAT 59.093 43.478 0.00 0.00 37.17 3.24
1844 1869 1.523758 AGAACCAAAAGCTACGCCAG 58.476 50.000 0.00 0.00 0.00 4.85
1996 2021 1.189752 TGAAAACAGTGGCCAGCAAA 58.810 45.000 5.11 0.00 0.00 3.68
1997 2022 1.189752 TTGAAAACAGTGGCCAGCAA 58.810 45.000 5.11 0.00 0.00 3.91
1998 2023 1.068895 CATTGAAAACAGTGGCCAGCA 59.931 47.619 5.11 0.00 0.00 4.41
2007 2032 7.043656 GGTTCCTTTTTACGTCATTGAAAACAG 60.044 37.037 0.00 0.00 0.00 3.16
2040 2065 7.170151 GCACCGTACCTTTCAAAAATACAAATT 59.830 33.333 0.00 0.00 0.00 1.82
2041 2066 6.643360 GCACCGTACCTTTCAAAAATACAAAT 59.357 34.615 0.00 0.00 0.00 2.32
2058 2083 4.011058 AGAAAAATAATGCGCACCGTAC 57.989 40.909 14.90 0.00 0.00 3.67
2060 2085 3.569250 AAGAAAAATAATGCGCACCGT 57.431 38.095 14.90 3.24 0.00 4.83
2063 2088 7.575332 TCCTTAAAAGAAAAATAATGCGCAC 57.425 32.000 14.90 0.00 0.00 5.34
2064 2089 8.594881 TTTCCTTAAAAGAAAAATAATGCGCA 57.405 26.923 14.96 14.96 30.48 6.09
2403 2428 7.224557 GGCATGAAAAGTGTTCAGTTTTAATGT 59.775 33.333 26.86 8.54 37.05 2.71
2404 2429 7.307337 GGGCATGAAAAGTGTTCAGTTTTAATG 60.307 37.037 24.64 24.64 37.48 1.90
2405 2430 6.705825 GGGCATGAAAAGTGTTCAGTTTTAAT 59.294 34.615 15.39 12.07 0.00 1.40
2406 2431 6.045955 GGGCATGAAAAGTGTTCAGTTTTAA 58.954 36.000 15.39 10.59 0.00 1.52
2407 2432 5.362430 AGGGCATGAAAAGTGTTCAGTTTTA 59.638 36.000 15.39 7.48 0.00 1.52
2408 2433 4.162131 AGGGCATGAAAAGTGTTCAGTTTT 59.838 37.500 15.35 15.35 0.00 2.43
2409 2434 3.706086 AGGGCATGAAAAGTGTTCAGTTT 59.294 39.130 1.51 0.43 0.00 2.66
2410 2435 3.299503 AGGGCATGAAAAGTGTTCAGTT 58.700 40.909 1.51 0.00 0.00 3.16
2411 2436 2.887152 GAGGGCATGAAAAGTGTTCAGT 59.113 45.455 1.51 0.00 0.00 3.41
2412 2437 3.152341 AGAGGGCATGAAAAGTGTTCAG 58.848 45.455 1.51 0.00 0.00 3.02
2413 2438 3.149196 GAGAGGGCATGAAAAGTGTTCA 58.851 45.455 0.00 0.00 0.00 3.18
2414 2439 3.149196 TGAGAGGGCATGAAAAGTGTTC 58.851 45.455 0.00 0.00 0.00 3.18
2415 2440 3.152341 CTGAGAGGGCATGAAAAGTGTT 58.848 45.455 0.00 0.00 0.00 3.32
2416 2441 2.553904 CCTGAGAGGGCATGAAAAGTGT 60.554 50.000 0.00 0.00 0.00 3.55
2417 2442 2.089980 CCTGAGAGGGCATGAAAAGTG 58.910 52.381 0.00 0.00 0.00 3.16
2418 2443 2.503895 CCTGAGAGGGCATGAAAAGT 57.496 50.000 0.00 0.00 0.00 2.66
2428 2453 1.270414 ACACTGATGGCCTGAGAGGG 61.270 60.000 3.32 0.00 35.37 4.30
2429 2454 0.177604 GACACTGATGGCCTGAGAGG 59.822 60.000 3.32 0.00 38.80 3.69
2430 2455 3.756739 GACACTGATGGCCTGAGAG 57.243 57.895 3.32 0.00 0.00 3.20
2437 2462 1.521681 GGCTACGGACACTGATGGC 60.522 63.158 0.00 0.00 0.00 4.40
2438 2463 0.465705 ATGGCTACGGACACTGATGG 59.534 55.000 0.00 0.00 30.68 3.51
2439 2464 1.858091 GATGGCTACGGACACTGATG 58.142 55.000 0.00 0.00 30.68 3.07
2440 2465 0.385751 CGATGGCTACGGACACTGAT 59.614 55.000 0.00 0.00 30.68 2.90
2441 2466 1.807226 CGATGGCTACGGACACTGA 59.193 57.895 0.00 0.00 30.68 3.41
2442 2467 4.402192 CGATGGCTACGGACACTG 57.598 61.111 0.00 0.00 30.68 3.66
2449 2474 2.438868 TTGATGATCCGATGGCTACG 57.561 50.000 0.00 0.00 0.00 3.51
2450 2475 4.199432 AGATTGATGATCCGATGGCTAC 57.801 45.455 0.00 0.00 35.21 3.58
2451 2476 4.564199 CCAAGATTGATGATCCGATGGCTA 60.564 45.833 0.00 0.00 35.21 3.93
2452 2477 3.409570 CAAGATTGATGATCCGATGGCT 58.590 45.455 0.00 0.00 35.21 4.75
2453 2478 2.486982 CCAAGATTGATGATCCGATGGC 59.513 50.000 0.00 0.00 35.21 4.40
2454 2479 3.079578 CCCAAGATTGATGATCCGATGG 58.920 50.000 0.00 0.00 35.21 3.51
2455 2480 2.486982 GCCCAAGATTGATGATCCGATG 59.513 50.000 0.00 0.00 35.21 3.84
2456 2481 2.107031 TGCCCAAGATTGATGATCCGAT 59.893 45.455 0.00 0.00 35.21 4.18
2457 2482 1.490069 TGCCCAAGATTGATGATCCGA 59.510 47.619 0.00 0.00 35.21 4.55
2458 2483 1.971481 TGCCCAAGATTGATGATCCG 58.029 50.000 0.00 0.00 35.21 4.18
2459 2484 4.950205 AAATGCCCAAGATTGATGATCC 57.050 40.909 0.00 0.00 35.21 3.36
2460 2485 4.980434 CGAAAATGCCCAAGATTGATGATC 59.020 41.667 0.00 0.00 34.83 2.92
2461 2486 4.202182 CCGAAAATGCCCAAGATTGATGAT 60.202 41.667 0.00 0.00 0.00 2.45
2462 2487 3.130869 CCGAAAATGCCCAAGATTGATGA 59.869 43.478 0.00 0.00 0.00 2.92
2463 2488 3.450578 CCGAAAATGCCCAAGATTGATG 58.549 45.455 0.00 0.00 0.00 3.07
2464 2489 2.159057 GCCGAAAATGCCCAAGATTGAT 60.159 45.455 0.00 0.00 0.00 2.57
2465 2490 1.204467 GCCGAAAATGCCCAAGATTGA 59.796 47.619 0.00 0.00 0.00 2.57
2466 2491 1.643880 GCCGAAAATGCCCAAGATTG 58.356 50.000 0.00 0.00 0.00 2.67
2467 2492 0.536724 GGCCGAAAATGCCCAAGATT 59.463 50.000 0.00 0.00 43.33 2.40
2468 2493 1.666209 CGGCCGAAAATGCCCAAGAT 61.666 55.000 24.07 0.00 46.48 2.40
2469 2494 2.339556 CGGCCGAAAATGCCCAAGA 61.340 57.895 24.07 0.00 46.48 3.02
2470 2495 2.153547 AACGGCCGAAAATGCCCAAG 62.154 55.000 35.90 0.00 46.48 3.61
2471 2496 0.894184 TAACGGCCGAAAATGCCCAA 60.894 50.000 35.90 0.73 46.48 4.12
2472 2497 1.303398 TAACGGCCGAAAATGCCCA 60.303 52.632 35.90 2.08 46.48 5.36
2473 2498 1.027792 TCTAACGGCCGAAAATGCCC 61.028 55.000 35.90 0.00 46.48 5.36
2474 2499 1.021968 ATCTAACGGCCGAAAATGCC 58.978 50.000 35.90 0.00 45.70 4.40
2475 2500 2.844122 AATCTAACGGCCGAAAATGC 57.156 45.000 35.90 0.00 0.00 3.56
2476 2501 5.163794 ACAGTAAATCTAACGGCCGAAAATG 60.164 40.000 35.90 17.35 0.00 2.32
2477 2502 4.939439 ACAGTAAATCTAACGGCCGAAAAT 59.061 37.500 35.90 16.33 0.00 1.82
2478 2503 4.317488 ACAGTAAATCTAACGGCCGAAAA 58.683 39.130 35.90 15.48 0.00 2.29
2479 2504 3.928375 GACAGTAAATCTAACGGCCGAAA 59.072 43.478 35.90 18.28 0.00 3.46
2480 2505 3.056678 TGACAGTAAATCTAACGGCCGAA 60.057 43.478 35.90 18.69 0.00 4.30
2481 2506 2.492881 TGACAGTAAATCTAACGGCCGA 59.507 45.455 35.90 10.13 0.00 5.54
2482 2507 2.883574 TGACAGTAAATCTAACGGCCG 58.116 47.619 26.86 26.86 0.00 6.13
2483 2508 4.025979 CGATTGACAGTAAATCTAACGGCC 60.026 45.833 8.77 0.00 32.83 6.13
2484 2509 4.550255 GCGATTGACAGTAAATCTAACGGC 60.550 45.833 8.77 1.35 32.83 5.68
2485 2510 4.804139 AGCGATTGACAGTAAATCTAACGG 59.196 41.667 8.77 0.00 32.83 4.44
2486 2511 5.051641 GGAGCGATTGACAGTAAATCTAACG 60.052 44.000 8.77 0.00 32.83 3.18
2487 2512 6.043411 AGGAGCGATTGACAGTAAATCTAAC 58.957 40.000 8.77 0.00 32.83 2.34
2488 2513 6.127451 TGAGGAGCGATTGACAGTAAATCTAA 60.127 38.462 8.77 0.00 32.83 2.10
2489 2514 5.359860 TGAGGAGCGATTGACAGTAAATCTA 59.640 40.000 8.77 0.00 32.83 1.98
2490 2515 4.160439 TGAGGAGCGATTGACAGTAAATCT 59.840 41.667 8.77 0.00 32.83 2.40
2491 2516 4.433615 TGAGGAGCGATTGACAGTAAATC 58.566 43.478 0.66 0.66 0.00 2.17
2492 2517 4.471904 TGAGGAGCGATTGACAGTAAAT 57.528 40.909 0.00 0.00 0.00 1.40
2493 2518 3.953712 TGAGGAGCGATTGACAGTAAA 57.046 42.857 0.00 0.00 0.00 2.01
2494 2519 3.701542 AGATGAGGAGCGATTGACAGTAA 59.298 43.478 0.00 0.00 0.00 2.24
2495 2520 3.067320 CAGATGAGGAGCGATTGACAGTA 59.933 47.826 0.00 0.00 0.00 2.74
2496 2521 2.106566 AGATGAGGAGCGATTGACAGT 58.893 47.619 0.00 0.00 0.00 3.55
2497 2522 2.471818 CAGATGAGGAGCGATTGACAG 58.528 52.381 0.00 0.00 0.00 3.51
2498 2523 1.137675 CCAGATGAGGAGCGATTGACA 59.862 52.381 0.00 0.00 0.00 3.58
2499 2524 1.863267 CCAGATGAGGAGCGATTGAC 58.137 55.000 0.00 0.00 0.00 3.18
2500 2525 0.105593 GCCAGATGAGGAGCGATTGA 59.894 55.000 0.00 0.00 0.00 2.57
2501 2526 0.883814 GGCCAGATGAGGAGCGATTG 60.884 60.000 0.00 0.00 0.00 2.67
2502 2527 1.053264 AGGCCAGATGAGGAGCGATT 61.053 55.000 5.01 0.00 0.00 3.34
2503 2528 1.459158 AGGCCAGATGAGGAGCGAT 60.459 57.895 5.01 0.00 0.00 4.58
2504 2529 2.042537 AGGCCAGATGAGGAGCGA 60.043 61.111 5.01 0.00 0.00 4.93
2505 2530 2.420890 GAGGCCAGATGAGGAGCG 59.579 66.667 5.01 0.00 0.00 5.03
2506 2531 1.965754 AACGAGGCCAGATGAGGAGC 61.966 60.000 5.01 0.00 0.00 4.70
2507 2532 0.103937 GAACGAGGCCAGATGAGGAG 59.896 60.000 5.01 0.00 0.00 3.69
2508 2533 1.667154 CGAACGAGGCCAGATGAGGA 61.667 60.000 5.01 0.00 0.00 3.71
2509 2534 1.227089 CGAACGAGGCCAGATGAGG 60.227 63.158 5.01 0.00 0.00 3.86
2510 2535 0.526524 GACGAACGAGGCCAGATGAG 60.527 60.000 5.01 0.00 0.00 2.90
2511 2536 1.248101 TGACGAACGAGGCCAGATGA 61.248 55.000 5.01 0.00 0.00 2.92
2512 2537 0.179100 ATGACGAACGAGGCCAGATG 60.179 55.000 5.01 0.00 0.00 2.90
2513 2538 0.179100 CATGACGAACGAGGCCAGAT 60.179 55.000 5.01 0.00 0.00 2.90
2514 2539 1.215382 CATGACGAACGAGGCCAGA 59.785 57.895 5.01 0.00 0.00 3.86
2515 2540 1.811266 CCATGACGAACGAGGCCAG 60.811 63.158 5.01 0.00 0.00 4.85
2516 2541 2.264480 CCATGACGAACGAGGCCA 59.736 61.111 5.01 0.00 0.00 5.36
2517 2542 2.511600 CCCATGACGAACGAGGCC 60.512 66.667 0.00 0.00 0.00 5.19
2518 2543 3.195698 GCCCATGACGAACGAGGC 61.196 66.667 0.00 0.00 0.00 4.70
2519 2544 2.511600 GGCCCATGACGAACGAGG 60.512 66.667 0.00 0.00 0.00 4.63
2520 2545 2.885644 CGGCCCATGACGAACGAG 60.886 66.667 0.00 0.00 0.00 4.18
2523 2548 3.499737 CAGCGGCCCATGACGAAC 61.500 66.667 0.00 0.00 0.00 3.95
2527 2552 4.479993 AGAGCAGCGGCCCATGAC 62.480 66.667 4.82 0.00 42.56 3.06
2528 2553 4.478371 CAGAGCAGCGGCCCATGA 62.478 66.667 4.82 0.00 42.56 3.07
2535 2560 4.749310 AAGCGACCAGAGCAGCGG 62.749 66.667 0.00 0.00 37.01 5.52
2536 2561 1.845809 AAAAAGCGACCAGAGCAGCG 61.846 55.000 0.00 0.00 37.01 5.18
2537 2562 0.110010 GAAAAAGCGACCAGAGCAGC 60.110 55.000 0.00 0.00 37.01 5.25
2538 2563 0.519077 GGAAAAAGCGACCAGAGCAG 59.481 55.000 0.00 0.00 37.01 4.24
2539 2564 1.227999 CGGAAAAAGCGACCAGAGCA 61.228 55.000 0.00 0.00 37.01 4.26
2540 2565 1.497722 CGGAAAAAGCGACCAGAGC 59.502 57.895 0.00 0.00 0.00 4.09
2541 2566 0.602905 ACCGGAAAAAGCGACCAGAG 60.603 55.000 9.46 0.00 0.00 3.35
2542 2567 0.882927 CACCGGAAAAAGCGACCAGA 60.883 55.000 9.46 0.00 0.00 3.86
2543 2568 1.164041 ACACCGGAAAAAGCGACCAG 61.164 55.000 9.46 0.00 0.00 4.00
2544 2569 1.153127 ACACCGGAAAAAGCGACCA 60.153 52.632 9.46 0.00 0.00 4.02
2545 2570 0.883370 AGACACCGGAAAAAGCGACC 60.883 55.000 9.46 0.00 0.00 4.79
2546 2571 0.511653 GAGACACCGGAAAAAGCGAC 59.488 55.000 9.46 0.00 0.00 5.19
2547 2572 0.105224 TGAGACACCGGAAAAAGCGA 59.895 50.000 9.46 0.00 0.00 4.93
2548 2573 0.512952 CTGAGACACCGGAAAAAGCG 59.487 55.000 9.46 0.00 0.00 4.68
2549 2574 1.878953 TCTGAGACACCGGAAAAAGC 58.121 50.000 9.46 0.00 0.00 3.51
2550 2575 6.554334 TTTAATCTGAGACACCGGAAAAAG 57.446 37.500 9.46 0.00 0.00 2.27
2551 2576 7.367285 CAATTTAATCTGAGACACCGGAAAAA 58.633 34.615 9.46 0.00 0.00 1.94
2552 2577 6.072175 CCAATTTAATCTGAGACACCGGAAAA 60.072 38.462 9.46 0.00 0.00 2.29
2553 2578 5.414454 CCAATTTAATCTGAGACACCGGAAA 59.586 40.000 9.46 0.00 0.00 3.13
2554 2579 4.941263 CCAATTTAATCTGAGACACCGGAA 59.059 41.667 9.46 0.00 0.00 4.30
2555 2580 4.513442 CCAATTTAATCTGAGACACCGGA 58.487 43.478 9.46 0.00 0.00 5.14
2556 2581 3.627577 CCCAATTTAATCTGAGACACCGG 59.372 47.826 0.00 0.00 0.00 5.28
2557 2582 3.065371 GCCCAATTTAATCTGAGACACCG 59.935 47.826 0.00 0.00 0.00 4.94
2558 2583 3.381590 GGCCCAATTTAATCTGAGACACC 59.618 47.826 0.00 0.00 0.00 4.16
2559 2584 4.273318 AGGCCCAATTTAATCTGAGACAC 58.727 43.478 0.00 0.00 0.00 3.67
2560 2585 4.591321 AGGCCCAATTTAATCTGAGACA 57.409 40.909 0.00 0.00 0.00 3.41
2561 2586 5.007724 CGTTAGGCCCAATTTAATCTGAGAC 59.992 44.000 0.00 0.00 0.00 3.36
2562 2587 5.123227 CGTTAGGCCCAATTTAATCTGAGA 58.877 41.667 0.00 0.00 0.00 3.27
2563 2588 4.275936 CCGTTAGGCCCAATTTAATCTGAG 59.724 45.833 0.00 0.00 0.00 3.35
2564 2589 4.204012 CCGTTAGGCCCAATTTAATCTGA 58.796 43.478 0.00 0.00 0.00 3.27
2565 2590 3.317993 CCCGTTAGGCCCAATTTAATCTG 59.682 47.826 0.00 0.00 35.76 2.90
2566 2591 3.562182 CCCGTTAGGCCCAATTTAATCT 58.438 45.455 0.00 0.00 35.76 2.40
2579 2604 4.408821 TGCTGCAGGCCCGTTAGG 62.409 66.667 17.12 0.00 40.92 2.69
2580 2605 3.127533 GTGCTGCAGGCCCGTTAG 61.128 66.667 17.12 0.00 40.92 2.34
2581 2606 4.715523 GGTGCTGCAGGCCCGTTA 62.716 66.667 17.12 0.00 40.92 3.18
2588 2613 3.292481 AAGGGGATGGTGCTGCAGG 62.292 63.158 17.12 0.00 0.00 4.85
2589 2614 1.751927 GAAGGGGATGGTGCTGCAG 60.752 63.158 10.11 10.11 0.00 4.41
2590 2615 2.356278 GAAGGGGATGGTGCTGCA 59.644 61.111 0.00 0.00 0.00 4.41
2591 2616 2.825836 CGAAGGGGATGGTGCTGC 60.826 66.667 0.00 0.00 0.00 5.25
2592 2617 1.746615 CACGAAGGGGATGGTGCTG 60.747 63.158 0.00 0.00 0.00 4.41
2593 2618 1.488705 TTCACGAAGGGGATGGTGCT 61.489 55.000 0.00 0.00 0.00 4.40
2594 2619 1.002624 TTCACGAAGGGGATGGTGC 60.003 57.895 0.00 0.00 0.00 5.01
2595 2620 1.026718 GCTTCACGAAGGGGATGGTG 61.027 60.000 8.78 0.00 38.80 4.17
2596 2621 1.299976 GCTTCACGAAGGGGATGGT 59.700 57.895 8.78 0.00 38.80 3.55
2597 2622 1.452108 GGCTTCACGAAGGGGATGG 60.452 63.158 8.78 0.00 38.80 3.51
2598 2623 1.026718 GTGGCTTCACGAAGGGGATG 61.027 60.000 8.78 0.00 38.80 3.51
2599 2624 1.299976 GTGGCTTCACGAAGGGGAT 59.700 57.895 8.78 0.00 38.80 3.85
2600 2625 2.747686 GTGGCTTCACGAAGGGGA 59.252 61.111 8.78 0.00 38.80 4.81
2601 2626 2.359975 GGTGGCTTCACGAAGGGG 60.360 66.667 8.78 0.00 42.09 4.79
2602 2627 2.742372 CGGTGGCTTCACGAAGGG 60.742 66.667 8.78 0.00 42.09 3.95
2603 2628 1.164041 AAACGGTGGCTTCACGAAGG 61.164 55.000 8.78 0.00 42.09 3.46
2604 2629 0.661020 AAAACGGTGGCTTCACGAAG 59.339 50.000 2.29 2.29 42.09 3.79
2605 2630 0.378962 CAAAACGGTGGCTTCACGAA 59.621 50.000 0.00 0.00 42.09 3.85
2606 2631 0.745128 ACAAAACGGTGGCTTCACGA 60.745 50.000 0.00 0.00 42.09 4.35
2607 2632 0.099791 AACAAAACGGTGGCTTCACG 59.900 50.000 0.00 0.00 42.09 4.35
2608 2633 1.535226 GGAACAAAACGGTGGCTTCAC 60.535 52.381 0.00 0.00 40.52 3.18
2609 2634 0.741915 GGAACAAAACGGTGGCTTCA 59.258 50.000 0.00 0.00 0.00 3.02
2610 2635 0.031585 GGGAACAAAACGGTGGCTTC 59.968 55.000 0.00 0.00 0.00 3.86
2611 2636 0.684805 TGGGAACAAAACGGTGGCTT 60.685 50.000 0.00 0.00 37.44 4.35
2612 2637 1.076632 TGGGAACAAAACGGTGGCT 60.077 52.632 0.00 0.00 37.44 4.75
2613 2638 3.527641 TGGGAACAAAACGGTGGC 58.472 55.556 0.00 0.00 37.44 5.01
2623 2648 1.104577 GGCGTTTGGTCTTGGGAACA 61.105 55.000 0.00 0.00 37.39 3.18
2624 2649 0.822121 AGGCGTTTGGTCTTGGGAAC 60.822 55.000 0.00 0.00 0.00 3.62
2625 2650 0.536460 GAGGCGTTTGGTCTTGGGAA 60.536 55.000 0.00 0.00 0.00 3.97
2626 2651 1.072505 GAGGCGTTTGGTCTTGGGA 59.927 57.895 0.00 0.00 0.00 4.37
2627 2652 1.971695 GGAGGCGTTTGGTCTTGGG 60.972 63.158 0.00 0.00 0.00 4.12
2628 2653 1.971695 GGGAGGCGTTTGGTCTTGG 60.972 63.158 0.00 0.00 0.00 3.61
2629 2654 1.228124 TGGGAGGCGTTTGGTCTTG 60.228 57.895 0.00 0.00 0.00 3.02
2630 2655 1.228154 GTGGGAGGCGTTTGGTCTT 60.228 57.895 0.00 0.00 0.00 3.01
2631 2656 2.430367 GTGGGAGGCGTTTGGTCT 59.570 61.111 0.00 0.00 0.00 3.85
2632 2657 2.112297 TGTGGGAGGCGTTTGGTC 59.888 61.111 0.00 0.00 0.00 4.02
2633 2658 2.203294 GTGTGGGAGGCGTTTGGT 60.203 61.111 0.00 0.00 0.00 3.67
2634 2659 2.983592 GGTGTGGGAGGCGTTTGG 60.984 66.667 0.00 0.00 0.00 3.28
2635 2660 2.976494 AAGGGTGTGGGAGGCGTTTG 62.976 60.000 0.00 0.00 0.00 2.93
2636 2661 2.692273 GAAGGGTGTGGGAGGCGTTT 62.692 60.000 0.00 0.00 0.00 3.60
2637 2662 3.175710 AAGGGTGTGGGAGGCGTT 61.176 61.111 0.00 0.00 0.00 4.84
2638 2663 3.637273 GAAGGGTGTGGGAGGCGT 61.637 66.667 0.00 0.00 0.00 5.68
2639 2664 4.760047 CGAAGGGTGTGGGAGGCG 62.760 72.222 0.00 0.00 0.00 5.52
2641 2666 4.410400 GGCGAAGGGTGTGGGAGG 62.410 72.222 0.00 0.00 0.00 4.30
2642 2667 3.322466 AGGCGAAGGGTGTGGGAG 61.322 66.667 0.00 0.00 0.00 4.30
2643 2668 3.636231 CAGGCGAAGGGTGTGGGA 61.636 66.667 0.00 0.00 0.00 4.37
2644 2669 4.722700 CCAGGCGAAGGGTGTGGG 62.723 72.222 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.