Multiple sequence alignment - TraesCS3B01G515000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G515000 chr3B 100.000 3448 0 0 1 3448 757520563 757517116 0.000000e+00 6368.0
1 TraesCS3B01G515000 chr3B 80.256 937 153 17 1048 1974 757865762 757866676 0.000000e+00 676.0
2 TraesCS3B01G515000 chr3B 83.019 371 57 5 2087 2451 757866784 757867154 7.130000e-87 331.0
3 TraesCS3B01G515000 chr3B 84.412 340 45 7 2118 2451 685166344 685166681 9.230000e-86 327.0
4 TraesCS3B01G515000 chr3B 85.484 310 41 4 2094 2399 684912485 684912176 1.540000e-83 320.0
5 TraesCS3B01G515000 chr3B 84.064 251 36 4 1420 1668 685150065 685150313 4.450000e-59 239.0
6 TraesCS3B01G515000 chr3B 78.316 392 48 27 6 395 51904924 51904568 5.790000e-53 219.0
7 TraesCS3B01G515000 chr3A 94.502 2110 87 4 790 2879 703185178 703183078 0.000000e+00 3227.0
8 TraesCS3B01G515000 chr3A 78.692 1483 248 42 999 2451 703741152 703742596 0.000000e+00 926.0
9 TraesCS3B01G515000 chr3A 78.140 1441 242 41 1048 2447 703784297 703785705 0.000000e+00 848.0
10 TraesCS3B01G515000 chr3A 81.976 749 68 37 6 707 703185908 703185180 1.070000e-159 573.0
11 TraesCS3B01G515000 chr3A 88.889 270 30 0 1399 1668 655860801 655861070 1.980000e-87 333.0
12 TraesCS3B01G515000 chr3A 87.778 270 33 0 1399 1668 655722448 655722717 2.000000e-82 316.0
13 TraesCS3B01G515000 chr3A 83.462 260 34 8 999 1252 655860431 655860687 2.070000e-57 233.0
14 TraesCS3B01G515000 chr3A 83.206 262 35 8 997 1252 655722076 655722334 7.440000e-57 231.0
15 TraesCS3B01G515000 chr3A 82.667 150 13 9 6 149 39731179 39731321 1.680000e-23 121.0
16 TraesCS3B01G515000 chr3D 77.809 1442 247 45 1048 2447 570772506 570773916 0.000000e+00 822.0
17 TraesCS3B01G515000 chr3D 79.187 1033 158 36 1453 2451 570570571 570571580 0.000000e+00 664.0
18 TraesCS3B01G515000 chr3D 80.876 685 88 27 1738 2394 520294959 520295628 1.850000e-137 499.0
19 TraesCS3B01G515000 chr3D 79.890 363 59 9 999 1351 570570176 570570534 1.590000e-63 254.0
20 TraesCS3B01G515000 chr3D 80.315 254 40 8 999 1246 520294303 520294552 2.110000e-42 183.0
21 TraesCS3B01G515000 chr5D 85.139 323 25 15 392 705 25325677 25325985 3.340000e-80 309.0
22 TraesCS3B01G515000 chr5D 81.491 389 46 21 8 395 476754418 476754055 2.600000e-76 296.0
23 TraesCS3B01G515000 chr5D 93.548 155 9 1 3208 3361 379223224 379223378 2.680000e-56 230.0
24 TraesCS3B01G515000 chr5A 79.082 392 47 25 6 395 680319913 680320271 1.600000e-58 237.0
25 TraesCS3B01G515000 chr5A 92.810 153 10 1 3210 3361 481158004 481157852 1.610000e-53 220.0
26 TraesCS3B01G515000 chr2D 94.702 151 8 0 3209 3359 349606269 349606419 5.750000e-58 235.0
27 TraesCS3B01G515000 chr2D 92.500 160 10 2 3203 3361 175605206 175605048 9.630000e-56 228.0
28 TraesCS3B01G515000 chr2D 82.632 190 24 6 2657 2846 56083574 56083754 3.560000e-35 159.0
29 TraesCS3B01G515000 chr2D 100.000 36 0 0 3358 3393 536991055 536991090 2.220000e-07 67.6
30 TraesCS3B01G515000 chr2D 97.297 37 1 0 3359 3395 37274886 37274922 2.870000e-06 63.9
31 TraesCS3B01G515000 chr2D 100.000 31 0 0 2810 2840 460981977 460981947 1.340000e-04 58.4
32 TraesCS3B01G515000 chr2D 96.970 33 1 0 3378 3410 324995603 324995571 4.810000e-04 56.5
33 TraesCS3B01G515000 chr7D 92.903 155 10 1 3208 3361 38267760 38267606 1.250000e-54 224.0
34 TraesCS3B01G515000 chr7D 97.436 39 0 1 3358 3395 571867936 571867898 7.990000e-07 65.8
35 TraesCS3B01G515000 chr7B 82.331 266 27 15 130 395 107547959 107548204 2.700000e-51 213.0
36 TraesCS3B01G515000 chr7A 77.238 391 53 27 6 395 27053513 27053868 2.710000e-46 196.0
37 TraesCS3B01G515000 chr6D 86.207 116 16 0 2989 3104 119994279 119994164 3.610000e-25 126.0
38 TraesCS3B01G515000 chr6D 100.000 35 0 0 3361 3395 327112348 327112382 7.990000e-07 65.8
39 TraesCS3B01G515000 chr5B 81.325 166 17 11 26 185 542735028 542734871 4.670000e-24 122.0
40 TraesCS3B01G515000 chr1D 85.859 99 12 1 50 148 307694880 307694784 1.690000e-18 104.0
41 TraesCS3B01G515000 chr1D 89.873 79 6 2 478 556 228041108 228041032 2.190000e-17 100.0
42 TraesCS3B01G515000 chr1D 87.778 90 6 4 471 556 457044879 457044791 2.190000e-17 100.0
43 TraesCS3B01G515000 chr1D 95.455 44 2 0 3352 3395 324488306 324488349 1.720000e-08 71.3
44 TraesCS3B01G515000 chr1D 100.000 34 0 0 3360 3393 327934895 327934928 2.870000e-06 63.9
45 TraesCS3B01G515000 chr6B 100.000 37 0 0 3359 3395 207105326 207105290 6.170000e-08 69.4
46 TraesCS3B01G515000 chr1A 100.000 35 0 0 3361 3395 550608339 550608373 7.990000e-07 65.8
47 TraesCS3B01G515000 chr2A 91.111 45 2 2 3352 3395 149459396 149459439 3.720000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G515000 chr3B 757517116 757520563 3447 True 6368.0 6368 100.0000 1 3448 1 chr3B.!!$R3 3447
1 TraesCS3B01G515000 chr3B 757865762 757867154 1392 False 503.5 676 81.6375 1048 2451 2 chr3B.!!$F3 1403
2 TraesCS3B01G515000 chr3A 703183078 703185908 2830 True 1900.0 3227 88.2390 6 2879 2 chr3A.!!$R1 2873
3 TraesCS3B01G515000 chr3A 703741152 703742596 1444 False 926.0 926 78.6920 999 2451 1 chr3A.!!$F2 1452
4 TraesCS3B01G515000 chr3A 703784297 703785705 1408 False 848.0 848 78.1400 1048 2447 1 chr3A.!!$F3 1399
5 TraesCS3B01G515000 chr3A 655860431 655861070 639 False 283.0 333 86.1755 999 1668 2 chr3A.!!$F5 669
6 TraesCS3B01G515000 chr3A 655722076 655722717 641 False 273.5 316 85.4920 997 1668 2 chr3A.!!$F4 671
7 TraesCS3B01G515000 chr3D 570772506 570773916 1410 False 822.0 822 77.8090 1048 2447 1 chr3D.!!$F1 1399
8 TraesCS3B01G515000 chr3D 570570176 570571580 1404 False 459.0 664 79.5385 999 2451 2 chr3D.!!$F3 1452
9 TraesCS3B01G515000 chr3D 520294303 520295628 1325 False 341.0 499 80.5955 999 2394 2 chr3D.!!$F2 1395

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
634 681 0.034337 TCTTTGCCGCGTACCTTTCT 59.966 50.0 4.92 0.0 0.0 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2469 2639 0.591659 GAAAAGGTGGACAACGAGCC 59.408 55.0 0.0 0.0 0.0 4.7 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
253 264 5.710513 TGTGTATACTCACTAACCGTTGT 57.289 39.130 4.17 0.00 38.90 3.32
262 273 3.687212 TCACTAACCGTTGTATGCCAATG 59.313 43.478 0.00 0.00 39.38 2.82
300 311 5.565592 TTAGCAAAGCCAATATGTGTGAG 57.434 39.130 0.00 0.00 0.00 3.51
305 316 2.636830 AGCCAATATGTGTGAGAGTGC 58.363 47.619 0.00 0.00 0.00 4.40
313 324 7.228108 CCAATATGTGTGAGAGTGCTATTCATT 59.772 37.037 0.00 0.00 0.00 2.57
314 325 7.725818 ATATGTGTGAGAGTGCTATTCATTG 57.274 36.000 0.00 0.00 0.00 2.82
318 329 4.081254 TGTGAGAGTGCTATTCATTGCTCT 60.081 41.667 0.00 0.00 35.67 4.09
320 331 4.874396 TGAGAGTGCTATTCATTGCTCTTG 59.126 41.667 0.00 0.00 33.79 3.02
364 375 1.202533 GCTAGAGCAGCCCGTAATCAA 60.203 52.381 0.00 0.00 45.23 2.57
366 377 1.959042 AGAGCAGCCCGTAATCAATG 58.041 50.000 0.00 0.00 0.00 2.82
411 458 4.043200 GCGTTGGGCTTCTGGTGC 62.043 66.667 0.00 0.00 39.11 5.01
429 476 1.593750 CTGCTGCTGCTACCGATCC 60.594 63.158 17.00 0.00 40.48 3.36
433 480 0.872021 CTGCTGCTACCGATCCGAAC 60.872 60.000 0.00 0.00 0.00 3.95
445 492 1.464997 GATCCGAACCACAAGCTTCAC 59.535 52.381 0.00 0.00 0.00 3.18
463 510 0.035317 ACGAGTTCATTGAGCTGCCA 59.965 50.000 7.83 0.00 0.00 4.92
514 561 2.185004 ACAGAGTTTGGGGTCAATCG 57.815 50.000 0.00 0.00 32.28 3.34
516 563 2.289694 ACAGAGTTTGGGGTCAATCGAG 60.290 50.000 0.00 0.00 32.28 4.04
518 565 2.076863 GAGTTTGGGGTCAATCGAGTG 58.923 52.381 6.51 6.51 32.28 3.51
519 566 1.697432 AGTTTGGGGTCAATCGAGTGA 59.303 47.619 12.21 12.21 32.28 3.41
520 567 1.804748 GTTTGGGGTCAATCGAGTGAC 59.195 52.381 32.03 32.03 45.99 3.67
533 580 8.237267 GTCAATCGAGTGACCTAAAATTCATTT 58.763 33.333 30.37 0.00 41.79 2.32
538 585 7.659799 TCGAGTGACCTAAAATTCATTTTCAGA 59.340 33.333 0.69 0.00 40.24 3.27
540 587 7.584987 AGTGACCTAAAATTCATTTTCAGACG 58.415 34.615 0.69 0.00 40.24 4.18
572 619 1.269257 GCCAGTCTCAACCTTGTTTGC 60.269 52.381 0.00 0.00 0.00 3.68
597 644 6.405508 CCGAGTGGCTAACTGACTATAAGAAA 60.406 42.308 0.00 0.00 40.07 2.52
599 646 7.009357 CGAGTGGCTAACTGACTATAAGAAAAC 59.991 40.741 0.00 0.00 40.07 2.43
602 649 5.006455 GGCTAACTGACTATAAGAAAACGCC 59.994 44.000 0.00 0.00 0.00 5.68
605 652 3.194116 ACTGACTATAAGAAAACGCCCGA 59.806 43.478 0.00 0.00 0.00 5.14
614 661 2.234414 AGAAAACGCCCGACATAGGTAA 59.766 45.455 0.00 0.00 0.00 2.85
622 669 3.139077 CCCGACATAGGTAATCTTTGCC 58.861 50.000 0.00 0.00 35.41 4.52
630 677 1.648504 GTAATCTTTGCCGCGTACCT 58.351 50.000 4.92 0.00 0.00 3.08
632 679 1.530323 AATCTTTGCCGCGTACCTTT 58.470 45.000 4.92 0.00 0.00 3.11
633 680 1.084289 ATCTTTGCCGCGTACCTTTC 58.916 50.000 4.92 0.00 0.00 2.62
634 681 0.034337 TCTTTGCCGCGTACCTTTCT 59.966 50.000 4.92 0.00 0.00 2.52
638 685 0.869730 TGCCGCGTACCTTTCTTTTC 59.130 50.000 4.92 0.00 0.00 2.29
639 686 1.154197 GCCGCGTACCTTTCTTTTCT 58.846 50.000 4.92 0.00 0.00 2.52
640 687 1.534163 GCCGCGTACCTTTCTTTTCTT 59.466 47.619 4.92 0.00 0.00 2.52
671 727 3.255725 CATCGTGTTTAGGTCGGCTTTA 58.744 45.455 0.00 0.00 0.00 1.85
679 735 0.763035 AGGTCGGCTTTACCAAGTGT 59.237 50.000 5.64 0.00 39.64 3.55
680 736 1.972795 AGGTCGGCTTTACCAAGTGTA 59.027 47.619 5.64 0.00 39.64 2.90
707 763 2.140717 GTTGACACTCGGTTTAGGTGG 58.859 52.381 0.00 0.00 35.53 4.61
708 764 0.034337 TGACACTCGGTTTAGGTGGC 59.966 55.000 0.00 0.00 39.24 5.01
709 765 0.320697 GACACTCGGTTTAGGTGGCT 59.679 55.000 0.00 0.00 36.20 4.75
710 766 0.034896 ACACTCGGTTTAGGTGGCTG 59.965 55.000 0.00 0.00 35.53 4.85
711 767 0.034896 CACTCGGTTTAGGTGGCTGT 59.965 55.000 0.00 0.00 0.00 4.40
712 768 0.763035 ACTCGGTTTAGGTGGCTGTT 59.237 50.000 0.00 0.00 0.00 3.16
714 770 1.804748 CTCGGTTTAGGTGGCTGTTTC 59.195 52.381 0.00 0.00 0.00 2.78
715 771 0.515564 CGGTTTAGGTGGCTGTTTCG 59.484 55.000 0.00 0.00 0.00 3.46
716 772 0.879090 GGTTTAGGTGGCTGTTTCGG 59.121 55.000 0.00 0.00 0.00 4.30
717 773 0.240145 GTTTAGGTGGCTGTTTCGGC 59.760 55.000 0.00 0.00 34.56 5.54
718 774 0.179015 TTTAGGTGGCTGTTTCGGCA 60.179 50.000 3.03 0.00 37.51 5.69
719 775 0.179015 TTAGGTGGCTGTTTCGGCAA 60.179 50.000 3.03 0.00 41.38 4.52
720 776 0.179015 TAGGTGGCTGTTTCGGCAAA 60.179 50.000 3.03 0.00 41.38 3.68
721 777 1.299850 GGTGGCTGTTTCGGCAAAC 60.300 57.895 3.03 5.85 41.38 2.93
733 789 2.253452 GCAAACAGCCGAGCACTG 59.747 61.111 0.00 0.00 41.08 3.66
734 790 2.949106 CAAACAGCCGAGCACTGG 59.051 61.111 0.00 0.00 39.55 4.00
735 791 2.281761 AAACAGCCGAGCACTGGG 60.282 61.111 0.00 0.00 39.55 4.45
745 801 4.643795 GCACTGGGCATGAAGCTA 57.356 55.556 0.00 0.00 44.79 3.32
746 802 3.106738 GCACTGGGCATGAAGCTAT 57.893 52.632 0.00 0.00 44.79 2.97
747 803 1.396653 GCACTGGGCATGAAGCTATT 58.603 50.000 0.00 0.00 44.79 1.73
748 804 1.753073 GCACTGGGCATGAAGCTATTT 59.247 47.619 0.00 0.00 44.79 1.40
749 805 2.167075 GCACTGGGCATGAAGCTATTTT 59.833 45.455 0.00 0.00 44.79 1.82
750 806 3.736126 GCACTGGGCATGAAGCTATTTTC 60.736 47.826 0.00 0.00 44.79 2.29
751 807 3.698040 CACTGGGCATGAAGCTATTTTCT 59.302 43.478 0.00 0.00 44.79 2.52
752 808 3.698040 ACTGGGCATGAAGCTATTTTCTG 59.302 43.478 0.00 0.00 44.79 3.02
753 809 3.025978 TGGGCATGAAGCTATTTTCTGG 58.974 45.455 0.00 0.00 44.79 3.86
754 810 3.026694 GGGCATGAAGCTATTTTCTGGT 58.973 45.455 0.00 0.00 44.79 4.00
755 811 4.207165 GGGCATGAAGCTATTTTCTGGTA 58.793 43.478 0.00 0.00 44.79 3.25
756 812 4.276926 GGGCATGAAGCTATTTTCTGGTAG 59.723 45.833 0.00 0.00 44.79 3.18
757 813 4.884164 GGCATGAAGCTATTTTCTGGTAGT 59.116 41.667 0.00 0.00 44.79 2.73
758 814 5.220931 GGCATGAAGCTATTTTCTGGTAGTG 60.221 44.000 0.00 0.00 44.79 2.74
759 815 5.586243 GCATGAAGCTATTTTCTGGTAGTGA 59.414 40.000 0.00 0.00 41.15 3.41
760 816 6.261826 GCATGAAGCTATTTTCTGGTAGTGAT 59.738 38.462 0.00 0.00 41.15 3.06
761 817 7.201767 GCATGAAGCTATTTTCTGGTAGTGATT 60.202 37.037 0.00 0.00 41.15 2.57
762 818 7.615582 TGAAGCTATTTTCTGGTAGTGATTG 57.384 36.000 0.00 0.00 0.00 2.67
763 819 6.599244 TGAAGCTATTTTCTGGTAGTGATTGG 59.401 38.462 0.00 0.00 0.00 3.16
764 820 6.313519 AGCTATTTTCTGGTAGTGATTGGA 57.686 37.500 0.00 0.00 0.00 3.53
765 821 6.116126 AGCTATTTTCTGGTAGTGATTGGAC 58.884 40.000 0.00 0.00 0.00 4.02
766 822 5.297029 GCTATTTTCTGGTAGTGATTGGACC 59.703 44.000 0.00 0.00 0.00 4.46
767 823 4.715534 TTTTCTGGTAGTGATTGGACCA 57.284 40.909 0.00 0.00 0.00 4.02
768 824 4.715534 TTTCTGGTAGTGATTGGACCAA 57.284 40.909 9.92 9.92 0.00 3.67
769 825 4.715534 TTCTGGTAGTGATTGGACCAAA 57.284 40.909 11.82 0.00 0.00 3.28
770 826 4.927267 TCTGGTAGTGATTGGACCAAAT 57.073 40.909 11.82 0.00 0.00 2.32
771 827 6.381498 TTCTGGTAGTGATTGGACCAAATA 57.619 37.500 11.82 0.00 0.00 1.40
772 828 5.989477 TCTGGTAGTGATTGGACCAAATAG 58.011 41.667 11.82 1.75 0.00 1.73
773 829 5.724370 TCTGGTAGTGATTGGACCAAATAGA 59.276 40.000 11.82 3.95 0.00 1.98
774 830 6.214615 TCTGGTAGTGATTGGACCAAATAGAA 59.785 38.462 11.82 0.00 0.00 2.10
775 831 6.785076 TGGTAGTGATTGGACCAAATAGAAA 58.215 36.000 11.82 0.00 0.00 2.52
776 832 6.657541 TGGTAGTGATTGGACCAAATAGAAAC 59.342 38.462 11.82 5.81 0.00 2.78
777 833 6.095021 GGTAGTGATTGGACCAAATAGAAACC 59.905 42.308 11.82 10.95 0.00 3.27
778 834 4.700213 AGTGATTGGACCAAATAGAAACCG 59.300 41.667 11.82 0.00 0.00 4.44
779 835 4.698304 GTGATTGGACCAAATAGAAACCGA 59.302 41.667 11.82 0.00 0.00 4.69
780 836 5.182380 GTGATTGGACCAAATAGAAACCGAA 59.818 40.000 11.82 0.00 0.00 4.30
781 837 5.414454 TGATTGGACCAAATAGAAACCGAAG 59.586 40.000 11.82 0.00 0.00 3.79
782 838 3.078837 TGGACCAAATAGAAACCGAAGC 58.921 45.455 0.00 0.00 0.00 3.86
783 839 3.078837 GGACCAAATAGAAACCGAAGCA 58.921 45.455 0.00 0.00 0.00 3.91
784 840 3.694566 GGACCAAATAGAAACCGAAGCAT 59.305 43.478 0.00 0.00 0.00 3.79
785 841 4.438744 GGACCAAATAGAAACCGAAGCATG 60.439 45.833 0.00 0.00 0.00 4.06
786 842 4.079253 ACCAAATAGAAACCGAAGCATGT 58.921 39.130 0.00 0.00 0.00 3.21
787 843 4.156008 ACCAAATAGAAACCGAAGCATGTC 59.844 41.667 0.00 0.00 0.00 3.06
788 844 4.334443 CAAATAGAAACCGAAGCATGTCG 58.666 43.478 0.00 0.00 40.77 4.35
794 850 3.489731 CGAAGCATGTCGGCACAT 58.510 55.556 0.00 0.00 44.72 3.21
795 851 1.796151 CGAAGCATGTCGGCACATT 59.204 52.632 0.00 0.00 40.66 2.71
799 855 0.736636 AGCATGTCGGCACATTGATG 59.263 50.000 0.00 0.00 40.66 3.07
889 957 4.842574 TGGAAAGATCGATGATGAAACCA 58.157 39.130 0.54 0.44 0.00 3.67
911 979 4.154015 CACTGCTAATTCACGTTCCATGAA 59.846 41.667 0.00 0.00 40.25 2.57
912 980 4.154195 ACTGCTAATTCACGTTCCATGAAC 59.846 41.667 0.00 0.00 38.84 3.18
914 982 3.438781 GCTAATTCACGTTCCATGAACCA 59.561 43.478 0.00 0.00 39.14 3.67
915 983 4.096382 GCTAATTCACGTTCCATGAACCAT 59.904 41.667 0.00 0.00 39.14 3.55
916 984 4.439305 AATTCACGTTCCATGAACCATG 57.561 40.909 0.00 0.00 39.14 3.66
918 986 3.348647 TCACGTTCCATGAACCATGAT 57.651 42.857 8.38 0.00 43.81 2.45
919 987 3.684908 TCACGTTCCATGAACCATGATT 58.315 40.909 8.38 0.00 43.81 2.57
920 988 3.689161 TCACGTTCCATGAACCATGATTC 59.311 43.478 8.38 0.00 43.81 2.52
921 989 3.016736 ACGTTCCATGAACCATGATTCC 58.983 45.455 8.38 0.00 43.81 3.01
922 990 3.016031 CGTTCCATGAACCATGATTCCA 58.984 45.455 8.38 0.00 43.81 3.53
923 991 3.443329 CGTTCCATGAACCATGATTCCAA 59.557 43.478 8.38 0.00 43.81 3.53
924 992 4.098349 CGTTCCATGAACCATGATTCCAAT 59.902 41.667 8.38 0.00 43.81 3.16
925 993 5.299028 CGTTCCATGAACCATGATTCCAATA 59.701 40.000 8.38 0.00 43.81 1.90
926 994 6.016024 CGTTCCATGAACCATGATTCCAATAT 60.016 38.462 8.38 0.00 43.81 1.28
927 995 7.470424 CGTTCCATGAACCATGATTCCAATATT 60.470 37.037 8.38 0.00 43.81 1.28
928 996 7.292713 TCCATGAACCATGATTCCAATATTG 57.707 36.000 8.58 8.58 43.81 1.90
971 1039 4.015764 TCATTTCTTTCGGCATCAATCCA 58.984 39.130 0.00 0.00 0.00 3.41
972 1040 4.462132 TCATTTCTTTCGGCATCAATCCAA 59.538 37.500 0.00 0.00 0.00 3.53
994 1062 3.321950 ACCATCTTCCCTAGCTAGCAAT 58.678 45.455 18.83 0.00 0.00 3.56
1040 1108 1.887797 TCCCACCACAACCCCTATAG 58.112 55.000 0.00 0.00 0.00 1.31
1134 1208 1.812922 GCAGCCACCACTGATCTCG 60.813 63.158 0.00 0.00 40.25 4.04
1671 1785 4.736896 GCCTTCGCGACCTTCGGT 62.737 66.667 9.15 0.00 40.84 4.69
1749 1869 4.143333 CCGTACACCCCGCTCCTG 62.143 72.222 0.00 0.00 0.00 3.86
1752 1872 2.118732 TACACCCCGCTCCTGACA 59.881 61.111 0.00 0.00 0.00 3.58
1977 2103 2.806244 CCACGCCATAATAAGGTACAGC 59.194 50.000 0.00 0.00 0.00 4.40
1978 2104 3.462982 CACGCCATAATAAGGTACAGCA 58.537 45.455 0.00 0.00 0.00 4.41
2007 2133 0.179124 TGCTTTCAACGCAAACCACC 60.179 50.000 0.00 0.00 33.87 4.61
2050 2194 2.355010 AACTAAGCTCCATGATGGGC 57.645 50.000 12.26 13.63 38.32 5.36
2054 2198 2.592861 GCTCCATGATGGGCGTCC 60.593 66.667 12.26 0.00 38.32 4.79
2127 2287 1.805945 CCGTTCGAGCTGTGCTACC 60.806 63.158 0.00 0.00 39.88 3.18
2243 2413 3.196901 TCAACGATAACTACATGGTGCCT 59.803 43.478 0.00 0.00 0.00 4.75
2465 2635 2.445682 AAACACTAGTGGGTTTGCCA 57.554 45.000 26.12 0.00 35.99 4.92
2494 2664 2.024414 GTTGTCCACCTTTTCAGCAGT 58.976 47.619 0.00 0.00 0.00 4.40
2509 2679 5.940192 TCAGCAGTTGTAAAAGTATGTGG 57.060 39.130 0.00 0.00 0.00 4.17
2541 2711 4.556233 GCTGACATTCTACACACACACTA 58.444 43.478 0.00 0.00 0.00 2.74
2566 2736 4.580580 AGTCACTTCAATTTCACTTGGACC 59.419 41.667 0.00 0.00 0.00 4.46
2571 2741 2.621055 TCAATTTCACTTGGACCGGTTG 59.379 45.455 9.42 1.81 0.00 3.77
2586 2756 2.546789 CCGGTTGGAACTTTCACTGTAC 59.453 50.000 0.00 0.00 37.49 2.90
2614 2784 3.879427 TGTGTACTTGCAATAAACACGC 58.121 40.909 23.09 14.22 42.58 5.34
2617 2787 4.320690 GTGTACTTGCAATAAACACGCATG 59.679 41.667 17.81 0.00 35.19 4.06
2652 2822 5.070047 TCGACCTAAATGGACCCTTTATCTC 59.930 44.000 2.81 1.15 39.71 2.75
2750 2920 1.075536 GGAGGCAAAGGAAGGAAGGAA 59.924 52.381 0.00 0.00 0.00 3.36
2757 2927 1.284313 AGGAAGGAAGGAAGGAGCAG 58.716 55.000 0.00 0.00 0.00 4.24
2762 2932 4.416738 AAGGAAGGAGCAGCCGCC 62.417 66.667 0.00 0.00 43.43 6.13
2786 2956 4.411927 GAGATCTATCTTAGGGTGGCAGA 58.588 47.826 0.00 0.00 37.25 4.26
2791 2961 1.729586 TCTTAGGGTGGCAGACTTGT 58.270 50.000 0.00 0.00 0.00 3.16
2796 2966 2.022129 GGTGGCAGACTTGTCGACG 61.022 63.158 11.62 0.00 0.00 5.12
2801 2971 1.263776 GCAGACTTGTCGACGATCTG 58.736 55.000 26.83 26.83 39.84 2.90
2808 2978 2.826979 TGTCGACGATCTGTCTTAGC 57.173 50.000 11.62 0.00 45.87 3.09
2812 2982 1.062148 CGACGATCTGTCTTAGCGTGA 59.938 52.381 13.30 0.00 45.87 4.35
2865 3043 3.691744 GAGAGTGCAGGCTCGACGG 62.692 68.421 0.00 0.00 40.26 4.79
2869 3047 1.959226 GTGCAGGCTCGACGGAAAA 60.959 57.895 0.00 0.00 0.00 2.29
2872 3050 1.338294 TGCAGGCTCGACGGAAAATTA 60.338 47.619 0.00 0.00 0.00 1.40
2879 3057 3.621715 GCTCGACGGAAAATTATGTTCCT 59.378 43.478 11.93 0.08 42.13 3.36
2880 3058 4.260253 GCTCGACGGAAAATTATGTTCCTC 60.260 45.833 11.93 7.73 42.13 3.71
2881 3059 3.861113 TCGACGGAAAATTATGTTCCTCG 59.139 43.478 20.09 20.09 42.13 4.63
2882 3060 3.543460 CGACGGAAAATTATGTTCCTCGC 60.543 47.826 16.78 5.78 42.13 5.03
2883 3061 2.681344 ACGGAAAATTATGTTCCTCGCC 59.319 45.455 11.93 0.00 42.13 5.54
2884 3062 2.680841 CGGAAAATTATGTTCCTCGCCA 59.319 45.455 11.93 0.00 42.13 5.69
2885 3063 3.242739 CGGAAAATTATGTTCCTCGCCAG 60.243 47.826 11.93 0.00 42.13 4.85
2886 3064 3.066760 GGAAAATTATGTTCCTCGCCAGG 59.933 47.826 6.90 0.00 41.25 4.45
2887 3065 2.348411 AATTATGTTCCTCGCCAGGG 57.652 50.000 0.00 0.00 40.80 4.45
2888 3066 1.213296 ATTATGTTCCTCGCCAGGGT 58.787 50.000 0.00 0.00 40.80 4.34
2889 3067 0.988832 TTATGTTCCTCGCCAGGGTT 59.011 50.000 0.00 0.00 40.80 4.11
2890 3068 1.868713 TATGTTCCTCGCCAGGGTTA 58.131 50.000 0.00 0.00 40.80 2.85
2891 3069 0.541863 ATGTTCCTCGCCAGGGTTAG 59.458 55.000 0.00 0.00 40.80 2.34
2892 3070 0.543410 TGTTCCTCGCCAGGGTTAGA 60.543 55.000 0.00 0.00 40.80 2.10
2893 3071 0.175989 GTTCCTCGCCAGGGTTAGAG 59.824 60.000 0.00 0.00 40.80 2.43
2894 3072 3.221222 CCTCGCCAGGGTTAGAGG 58.779 66.667 10.56 10.56 43.43 3.69
2895 3073 2.435693 CCTCGCCAGGGTTAGAGGG 61.436 68.421 14.59 0.00 44.78 4.30
2896 3074 1.381327 CTCGCCAGGGTTAGAGGGA 60.381 63.158 0.00 0.00 0.00 4.20
2897 3075 0.760945 CTCGCCAGGGTTAGAGGGAT 60.761 60.000 0.00 0.00 0.00 3.85
2898 3076 1.048724 TCGCCAGGGTTAGAGGGATG 61.049 60.000 0.00 0.00 0.00 3.51
2899 3077 1.839894 GCCAGGGTTAGAGGGATGG 59.160 63.158 0.00 0.00 0.00 3.51
2900 3078 1.839894 CCAGGGTTAGAGGGATGGC 59.160 63.158 0.00 0.00 0.00 4.40
2901 3079 1.709994 CCAGGGTTAGAGGGATGGCC 61.710 65.000 0.00 0.00 0.00 5.36
2902 3080 0.988145 CAGGGTTAGAGGGATGGCCA 60.988 60.000 8.56 8.56 35.15 5.36
2903 3081 0.028642 AGGGTTAGAGGGATGGCCAT 60.029 55.000 20.96 20.96 35.15 4.40
2904 3082 0.111253 GGGTTAGAGGGATGGCCATG 59.889 60.000 26.56 0.00 35.15 3.66
2905 3083 0.111253 GGTTAGAGGGATGGCCATGG 59.889 60.000 26.56 7.63 35.15 3.66
2906 3084 1.140312 GTTAGAGGGATGGCCATGGA 58.860 55.000 26.56 0.00 35.15 3.41
2907 3085 1.707427 GTTAGAGGGATGGCCATGGAT 59.293 52.381 26.56 8.06 35.15 3.41
2908 3086 1.365293 TAGAGGGATGGCCATGGATG 58.635 55.000 26.56 0.00 35.15 3.51
2920 3098 3.877450 TGGATGGGCCAGGCGATC 61.877 66.667 13.78 9.37 43.33 3.69
2921 3099 4.996434 GGATGGGCCAGGCGATCG 62.996 72.222 13.78 11.69 36.34 3.69
2922 3100 4.996434 GATGGGCCAGGCGATCGG 62.996 72.222 18.30 0.43 0.00 4.18
2952 3130 3.155167 GGGGGTCAGCGAGGTAGG 61.155 72.222 0.00 0.00 0.00 3.18
2953 3131 3.851128 GGGGTCAGCGAGGTAGGC 61.851 72.222 0.00 0.00 0.00 3.93
2954 3132 4.208686 GGGTCAGCGAGGTAGGCG 62.209 72.222 0.00 0.00 35.00 5.52
2961 3139 4.577246 CGAGGTAGGCGCTGGAGC 62.577 72.222 7.64 2.29 37.78 4.70
2962 3140 3.461773 GAGGTAGGCGCTGGAGCA 61.462 66.667 7.64 0.00 42.21 4.26
2963 3141 3.724914 GAGGTAGGCGCTGGAGCAC 62.725 68.421 7.64 0.00 42.21 4.40
2964 3142 4.840005 GGTAGGCGCTGGAGCACC 62.840 72.222 7.64 0.00 43.29 5.01
2998 3176 3.723348 GACGGCAGGCGGTTTGTC 61.723 66.667 21.86 4.67 0.00 3.18
3001 3179 2.975799 GGCAGGCGGTTTGTCGAA 60.976 61.111 0.00 0.00 0.00 3.71
3002 3180 2.556287 GCAGGCGGTTTGTCGAAG 59.444 61.111 0.00 0.00 0.00 3.79
3003 3181 1.959226 GCAGGCGGTTTGTCGAAGA 60.959 57.895 0.00 0.00 0.00 2.87
3004 3182 1.503818 GCAGGCGGTTTGTCGAAGAA 61.504 55.000 0.00 0.00 39.69 2.52
3005 3183 0.512952 CAGGCGGTTTGTCGAAGAAG 59.487 55.000 0.00 0.00 39.69 2.85
3006 3184 0.391597 AGGCGGTTTGTCGAAGAAGA 59.608 50.000 0.00 0.00 39.69 2.87
3007 3185 1.002087 AGGCGGTTTGTCGAAGAAGAT 59.998 47.619 0.00 0.00 39.69 2.40
3008 3186 1.128692 GGCGGTTTGTCGAAGAAGATG 59.871 52.381 0.00 0.00 39.69 2.90
3009 3187 1.464189 GCGGTTTGTCGAAGAAGATGC 60.464 52.381 0.00 0.00 39.69 3.91
3010 3188 1.798223 CGGTTTGTCGAAGAAGATGCA 59.202 47.619 0.00 0.00 39.69 3.96
3011 3189 2.411547 CGGTTTGTCGAAGAAGATGCAC 60.412 50.000 0.00 0.00 39.69 4.57
3012 3190 2.548057 GGTTTGTCGAAGAAGATGCACA 59.452 45.455 0.00 0.00 39.69 4.57
3013 3191 3.364366 GGTTTGTCGAAGAAGATGCACAG 60.364 47.826 0.00 0.00 39.69 3.66
3014 3192 2.084610 TGTCGAAGAAGATGCACAGG 57.915 50.000 0.00 0.00 39.69 4.00
3015 3193 1.618343 TGTCGAAGAAGATGCACAGGA 59.382 47.619 0.00 0.00 39.69 3.86
3016 3194 2.266554 GTCGAAGAAGATGCACAGGAG 58.733 52.381 0.00 0.00 39.69 3.69
3017 3195 2.094494 GTCGAAGAAGATGCACAGGAGA 60.094 50.000 0.00 0.00 39.69 3.71
3018 3196 2.762887 TCGAAGAAGATGCACAGGAGAT 59.237 45.455 0.00 0.00 0.00 2.75
3019 3197 3.122297 CGAAGAAGATGCACAGGAGATC 58.878 50.000 0.00 0.00 0.00 2.75
3020 3198 3.181477 CGAAGAAGATGCACAGGAGATCT 60.181 47.826 0.00 0.00 0.00 2.75
3021 3199 4.680172 CGAAGAAGATGCACAGGAGATCTT 60.680 45.833 0.00 0.00 38.80 2.40
3022 3200 4.139859 AGAAGATGCACAGGAGATCTTG 57.860 45.455 0.00 0.00 36.73 3.02
3023 3201 3.118334 AGAAGATGCACAGGAGATCTTGG 60.118 47.826 0.00 0.00 36.73 3.61
3024 3202 1.134159 AGATGCACAGGAGATCTTGGC 60.134 52.381 0.00 0.00 0.00 4.52
3025 3203 0.917533 ATGCACAGGAGATCTTGGCT 59.082 50.000 0.00 0.00 0.00 4.75
3026 3204 1.571955 TGCACAGGAGATCTTGGCTA 58.428 50.000 0.00 0.00 0.00 3.93
3027 3205 1.483827 TGCACAGGAGATCTTGGCTAG 59.516 52.381 0.00 0.00 0.00 3.42
3028 3206 1.759445 GCACAGGAGATCTTGGCTAGA 59.241 52.381 0.14 0.14 37.28 2.43
3029 3207 2.368221 GCACAGGAGATCTTGGCTAGAT 59.632 50.000 11.26 11.26 46.41 1.98
3030 3208 3.576118 GCACAGGAGATCTTGGCTAGATA 59.424 47.826 11.41 0.00 43.75 1.98
3031 3209 4.222588 GCACAGGAGATCTTGGCTAGATAT 59.777 45.833 11.41 8.61 43.75 1.63
3032 3210 5.279910 GCACAGGAGATCTTGGCTAGATATT 60.280 44.000 11.41 3.58 43.75 1.28
3033 3211 6.071108 GCACAGGAGATCTTGGCTAGATATTA 60.071 42.308 11.41 0.00 43.75 0.98
3034 3212 7.526192 GCACAGGAGATCTTGGCTAGATATTAA 60.526 40.741 11.41 0.00 43.75 1.40
3035 3213 8.370940 CACAGGAGATCTTGGCTAGATATTAAA 58.629 37.037 11.41 0.00 43.75 1.52
3036 3214 8.592809 ACAGGAGATCTTGGCTAGATATTAAAG 58.407 37.037 11.41 3.93 43.75 1.85
3037 3215 8.811017 CAGGAGATCTTGGCTAGATATTAAAGA 58.189 37.037 11.41 0.00 43.75 2.52
3038 3216 9.386122 AGGAGATCTTGGCTAGATATTAAAGAA 57.614 33.333 11.41 0.00 43.75 2.52
3047 3225 8.307483 TGGCTAGATATTAAAGAAAGAGATCCG 58.693 37.037 0.00 0.00 0.00 4.18
3048 3226 7.762159 GGCTAGATATTAAAGAAAGAGATCCGG 59.238 40.741 0.00 0.00 0.00 5.14
3049 3227 7.276878 GCTAGATATTAAAGAAAGAGATCCGGC 59.723 40.741 0.00 0.00 0.00 6.13
3050 3228 6.468543 AGATATTAAAGAAAGAGATCCGGCC 58.531 40.000 0.00 0.00 0.00 6.13
3051 3229 2.596904 TAAAGAAAGAGATCCGGCCG 57.403 50.000 21.04 21.04 0.00 6.13
3052 3230 0.613777 AAAGAAAGAGATCCGGCCGT 59.386 50.000 26.12 6.07 0.00 5.68
3053 3231 0.175989 AAGAAAGAGATCCGGCCGTC 59.824 55.000 26.12 16.46 0.00 4.79
3054 3232 1.227292 GAAAGAGATCCGGCCGTCC 60.227 63.158 26.12 12.49 0.00 4.79
3055 3233 1.956629 GAAAGAGATCCGGCCGTCCA 61.957 60.000 26.12 7.89 0.00 4.02
3056 3234 1.338136 AAAGAGATCCGGCCGTCCAT 61.338 55.000 26.12 12.99 0.00 3.41
3057 3235 1.338136 AAGAGATCCGGCCGTCCATT 61.338 55.000 26.12 10.49 0.00 3.16
3058 3236 1.146263 GAGATCCGGCCGTCCATTT 59.854 57.895 26.12 8.07 0.00 2.32
3059 3237 0.463833 GAGATCCGGCCGTCCATTTT 60.464 55.000 26.12 2.11 0.00 1.82
3060 3238 0.034477 AGATCCGGCCGTCCATTTTT 60.034 50.000 26.12 0.00 0.00 1.94
3061 3239 0.380733 GATCCGGCCGTCCATTTTTC 59.619 55.000 26.12 4.86 0.00 2.29
3062 3240 0.322997 ATCCGGCCGTCCATTTTTCA 60.323 50.000 26.12 0.00 0.00 2.69
3063 3241 0.322997 TCCGGCCGTCCATTTTTCAT 60.323 50.000 26.12 0.00 0.00 2.57
3064 3242 0.100503 CCGGCCGTCCATTTTTCATC 59.899 55.000 26.12 0.00 0.00 2.92
3065 3243 0.100503 CGGCCGTCCATTTTTCATCC 59.899 55.000 19.50 0.00 0.00 3.51
3066 3244 1.181786 GGCCGTCCATTTTTCATCCA 58.818 50.000 0.00 0.00 0.00 3.41
3067 3245 1.548269 GGCCGTCCATTTTTCATCCAA 59.452 47.619 0.00 0.00 0.00 3.53
3068 3246 2.606108 GCCGTCCATTTTTCATCCAAC 58.394 47.619 0.00 0.00 0.00 3.77
3069 3247 2.862512 CCGTCCATTTTTCATCCAACG 58.137 47.619 0.00 0.00 0.00 4.10
3070 3248 2.415357 CCGTCCATTTTTCATCCAACGG 60.415 50.000 0.00 0.00 41.90 4.44
3071 3249 2.606108 GTCCATTTTTCATCCAACGGC 58.394 47.619 0.00 0.00 0.00 5.68
3072 3250 2.231235 GTCCATTTTTCATCCAACGGCT 59.769 45.455 0.00 0.00 0.00 5.52
3073 3251 2.896685 TCCATTTTTCATCCAACGGCTT 59.103 40.909 0.00 0.00 0.00 4.35
3074 3252 4.082463 GTCCATTTTTCATCCAACGGCTTA 60.082 41.667 0.00 0.00 0.00 3.09
3075 3253 4.524714 TCCATTTTTCATCCAACGGCTTAA 59.475 37.500 0.00 0.00 0.00 1.85
3076 3254 5.011125 TCCATTTTTCATCCAACGGCTTAAA 59.989 36.000 0.00 0.00 0.00 1.52
3077 3255 5.120053 CCATTTTTCATCCAACGGCTTAAAC 59.880 40.000 0.00 0.00 0.00 2.01
3078 3256 3.926821 TTTCATCCAACGGCTTAAACC 57.073 42.857 0.00 0.00 0.00 3.27
3079 3257 2.570415 TCATCCAACGGCTTAAACCA 57.430 45.000 0.00 0.00 0.00 3.67
3080 3258 2.865079 TCATCCAACGGCTTAAACCAA 58.135 42.857 0.00 0.00 0.00 3.67
3081 3259 3.223435 TCATCCAACGGCTTAAACCAAA 58.777 40.909 0.00 0.00 0.00 3.28
3082 3260 3.829601 TCATCCAACGGCTTAAACCAAAT 59.170 39.130 0.00 0.00 0.00 2.32
3083 3261 3.926821 TCCAACGGCTTAAACCAAATC 57.073 42.857 0.00 0.00 0.00 2.17
3084 3262 2.226912 TCCAACGGCTTAAACCAAATCG 59.773 45.455 0.00 0.00 0.00 3.34
3085 3263 2.226912 CCAACGGCTTAAACCAAATCGA 59.773 45.455 0.00 0.00 0.00 3.59
3086 3264 3.119637 CCAACGGCTTAAACCAAATCGAT 60.120 43.478 0.00 0.00 0.00 3.59
3087 3265 4.481463 CAACGGCTTAAACCAAATCGATT 58.519 39.130 4.39 4.39 0.00 3.34
3088 3266 5.392165 CCAACGGCTTAAACCAAATCGATTA 60.392 40.000 11.83 0.00 0.00 1.75
3089 3267 5.883503 ACGGCTTAAACCAAATCGATTAA 57.116 34.783 11.83 0.00 0.00 1.40
3090 3268 5.633927 ACGGCTTAAACCAAATCGATTAAC 58.366 37.500 11.83 0.00 0.00 2.01
3091 3269 5.032220 CGGCTTAAACCAAATCGATTAACC 58.968 41.667 11.83 4.79 0.00 2.85
3092 3270 5.345702 GGCTTAAACCAAATCGATTAACCC 58.654 41.667 11.83 0.00 0.00 4.11
3093 3271 5.105675 GGCTTAAACCAAATCGATTAACCCA 60.106 40.000 11.83 0.00 0.00 4.51
3094 3272 6.391537 GCTTAAACCAAATCGATTAACCCAA 58.608 36.000 11.83 1.51 0.00 4.12
3095 3273 6.869388 GCTTAAACCAAATCGATTAACCCAAA 59.131 34.615 11.83 2.34 0.00 3.28
3096 3274 7.385478 GCTTAAACCAAATCGATTAACCCAAAA 59.615 33.333 11.83 0.92 0.00 2.44
3097 3275 9.262358 CTTAAACCAAATCGATTAACCCAAAAA 57.738 29.630 11.83 0.00 0.00 1.94
3123 3301 7.856145 AAAATCAGAGGACTGTGATATTGTC 57.144 36.000 11.72 0.00 41.92 3.18
3124 3302 6.550938 AATCAGAGGACTGTGATATTGTCA 57.449 37.500 11.72 0.00 41.92 3.58
3144 3322 7.310072 TGTCACTCTCTTATCTTTCTACTCG 57.690 40.000 0.00 0.00 0.00 4.18
3145 3323 6.879993 TGTCACTCTCTTATCTTTCTACTCGT 59.120 38.462 0.00 0.00 0.00 4.18
3146 3324 7.064847 TGTCACTCTCTTATCTTTCTACTCGTC 59.935 40.741 0.00 0.00 0.00 4.20
3147 3325 7.064847 GTCACTCTCTTATCTTTCTACTCGTCA 59.935 40.741 0.00 0.00 0.00 4.35
3148 3326 7.771361 TCACTCTCTTATCTTTCTACTCGTCAT 59.229 37.037 0.00 0.00 0.00 3.06
3149 3327 8.402472 CACTCTCTTATCTTTCTACTCGTCATT 58.598 37.037 0.00 0.00 0.00 2.57
3150 3328 8.962679 ACTCTCTTATCTTTCTACTCGTCATTT 58.037 33.333 0.00 0.00 0.00 2.32
3151 3329 9.796120 CTCTCTTATCTTTCTACTCGTCATTTT 57.204 33.333 0.00 0.00 0.00 1.82
3171 3349 4.503741 TTTTGCAAACATACAGGAGAGC 57.496 40.909 12.39 0.00 0.00 4.09
3172 3350 3.423539 TTGCAAACATACAGGAGAGCT 57.576 42.857 0.00 0.00 0.00 4.09
3173 3351 2.703416 TGCAAACATACAGGAGAGCTG 58.297 47.619 0.00 0.00 0.00 4.24
3174 3352 1.399791 GCAAACATACAGGAGAGCTGC 59.600 52.381 0.00 0.00 0.00 5.25
3175 3353 2.703416 CAAACATACAGGAGAGCTGCA 58.297 47.619 1.02 0.00 0.00 4.41
3176 3354 3.276857 CAAACATACAGGAGAGCTGCAT 58.723 45.455 1.02 0.00 0.00 3.96
3177 3355 4.445453 CAAACATACAGGAGAGCTGCATA 58.555 43.478 1.02 0.00 0.00 3.14
3178 3356 3.742433 ACATACAGGAGAGCTGCATAC 57.258 47.619 1.02 0.00 0.00 2.39
3179 3357 2.366916 ACATACAGGAGAGCTGCATACC 59.633 50.000 1.02 1.51 0.00 2.73
3180 3358 2.159179 TACAGGAGAGCTGCATACCA 57.841 50.000 1.02 0.00 0.00 3.25
3181 3359 1.504912 ACAGGAGAGCTGCATACCAT 58.495 50.000 1.02 0.00 0.00 3.55
3182 3360 1.842562 ACAGGAGAGCTGCATACCATT 59.157 47.619 1.02 0.00 0.00 3.16
3183 3361 3.041211 ACAGGAGAGCTGCATACCATTA 58.959 45.455 1.02 0.00 0.00 1.90
3184 3362 3.455910 ACAGGAGAGCTGCATACCATTAA 59.544 43.478 1.02 0.00 0.00 1.40
3185 3363 4.103785 ACAGGAGAGCTGCATACCATTAAT 59.896 41.667 1.02 0.00 0.00 1.40
3186 3364 5.068636 CAGGAGAGCTGCATACCATTAATT 58.931 41.667 1.02 0.00 0.00 1.40
3187 3365 6.183361 ACAGGAGAGCTGCATACCATTAATTA 60.183 38.462 1.02 0.00 0.00 1.40
3188 3366 6.712095 CAGGAGAGCTGCATACCATTAATTAA 59.288 38.462 1.02 0.00 0.00 1.40
3189 3367 6.939163 AGGAGAGCTGCATACCATTAATTAAG 59.061 38.462 1.02 0.00 0.00 1.85
3190 3368 6.936900 GGAGAGCTGCATACCATTAATTAAGA 59.063 38.462 1.02 0.00 0.00 2.10
3191 3369 7.445402 GGAGAGCTGCATACCATTAATTAAGAA 59.555 37.037 1.02 0.00 0.00 2.52
3192 3370 8.388484 AGAGCTGCATACCATTAATTAAGAAG 57.612 34.615 1.02 0.00 0.00 2.85
3193 3371 8.213679 AGAGCTGCATACCATTAATTAAGAAGA 58.786 33.333 1.02 0.00 0.00 2.87
3194 3372 8.159344 AGCTGCATACCATTAATTAAGAAGAC 57.841 34.615 1.02 0.00 0.00 3.01
3195 3373 7.775093 AGCTGCATACCATTAATTAAGAAGACA 59.225 33.333 1.02 0.00 0.00 3.41
3196 3374 8.072567 GCTGCATACCATTAATTAAGAAGACAG 58.927 37.037 3.94 6.57 0.00 3.51
3197 3375 9.330063 CTGCATACCATTAATTAAGAAGACAGA 57.670 33.333 3.94 0.00 0.00 3.41
3198 3376 9.851686 TGCATACCATTAATTAAGAAGACAGAT 57.148 29.630 3.94 0.00 0.00 2.90
3209 3387 9.877178 AATTAAGAAGACAGATAGTACAACCAG 57.123 33.333 0.00 0.00 0.00 4.00
3210 3388 6.919775 AAGAAGACAGATAGTACAACCAGT 57.080 37.500 0.00 0.00 0.00 4.00
3211 3389 6.274157 AGAAGACAGATAGTACAACCAGTG 57.726 41.667 0.00 0.00 0.00 3.66
3212 3390 5.186021 AGAAGACAGATAGTACAACCAGTGG 59.814 44.000 7.91 7.91 0.00 4.00
3213 3391 3.195825 AGACAGATAGTACAACCAGTGGC 59.804 47.826 9.78 0.00 0.00 5.01
3214 3392 2.094182 ACAGATAGTACAACCAGTGGCG 60.094 50.000 9.78 2.93 0.00 5.69
3215 3393 1.480954 AGATAGTACAACCAGTGGCGG 59.519 52.381 9.78 3.82 0.00 6.13
3216 3394 1.479323 GATAGTACAACCAGTGGCGGA 59.521 52.381 9.78 0.00 0.00 5.54
3217 3395 0.892755 TAGTACAACCAGTGGCGGAG 59.107 55.000 9.78 0.00 0.00 4.63
3234 3412 4.606457 CGGAGCCAAGATTTAAACTCTG 57.394 45.455 0.00 0.00 0.00 3.35
3235 3413 4.003648 CGGAGCCAAGATTTAAACTCTGT 58.996 43.478 0.00 0.00 0.00 3.41
3236 3414 4.142816 CGGAGCCAAGATTTAAACTCTGTG 60.143 45.833 0.00 0.00 0.00 3.66
3237 3415 4.762251 GGAGCCAAGATTTAAACTCTGTGT 59.238 41.667 0.00 0.00 0.00 3.72
3238 3416 5.938125 GGAGCCAAGATTTAAACTCTGTGTA 59.062 40.000 0.00 0.00 0.00 2.90
3239 3417 6.092807 GGAGCCAAGATTTAAACTCTGTGTAG 59.907 42.308 0.00 0.00 0.00 2.74
3240 3418 6.534634 AGCCAAGATTTAAACTCTGTGTAGT 58.465 36.000 0.00 0.00 0.00 2.73
3241 3419 6.651225 AGCCAAGATTTAAACTCTGTGTAGTC 59.349 38.462 0.00 0.00 0.00 2.59
3242 3420 6.426937 GCCAAGATTTAAACTCTGTGTAGTCA 59.573 38.462 0.00 0.00 0.00 3.41
3243 3421 7.041372 GCCAAGATTTAAACTCTGTGTAGTCAA 60.041 37.037 0.00 0.00 0.00 3.18
3244 3422 9.003658 CCAAGATTTAAACTCTGTGTAGTCAAT 57.996 33.333 0.00 0.00 0.00 2.57
3253 3431 9.950680 AAACTCTGTGTAGTCAATACAAAATTG 57.049 29.630 0.00 0.00 45.88 2.32
3254 3432 8.677148 ACTCTGTGTAGTCAATACAAAATTGT 57.323 30.769 4.01 4.01 45.88 2.71
3255 3433 8.559536 ACTCTGTGTAGTCAATACAAAATTGTG 58.440 33.333 8.99 0.00 45.88 3.33
3256 3434 8.445275 TCTGTGTAGTCAATACAAAATTGTGT 57.555 30.769 6.49 6.49 45.88 3.72
3257 3435 9.549078 TCTGTGTAGTCAATACAAAATTGTGTA 57.451 29.630 10.90 10.90 45.88 2.90
3258 3436 9.811655 CTGTGTAGTCAATACAAAATTGTGTAG 57.188 33.333 13.77 2.19 45.88 2.74
3259 3437 9.332502 TGTGTAGTCAATACAAAATTGTGTAGT 57.667 29.630 13.77 8.66 45.88 2.73
3320 3498 8.925161 TTTGCATAATTCTTGCTTGTATTACC 57.075 30.769 12.83 0.00 40.77 2.85
3321 3499 7.637631 TGCATAATTCTTGCTTGTATTACCA 57.362 32.000 12.83 0.00 40.77 3.25
3322 3500 8.060931 TGCATAATTCTTGCTTGTATTACCAA 57.939 30.769 12.83 0.00 40.77 3.67
3323 3501 8.526978 TGCATAATTCTTGCTTGTATTACCAAA 58.473 29.630 12.83 0.00 40.77 3.28
3324 3502 9.364989 GCATAATTCTTGCTTGTATTACCAAAA 57.635 29.630 6.14 0.00 37.14 2.44
3327 3505 8.601845 AATTCTTGCTTGTATTACCAAAAACC 57.398 30.769 0.00 0.00 0.00 3.27
3328 3506 6.969993 TCTTGCTTGTATTACCAAAAACCT 57.030 33.333 0.00 0.00 0.00 3.50
3329 3507 6.744112 TCTTGCTTGTATTACCAAAAACCTG 58.256 36.000 0.00 0.00 0.00 4.00
3330 3508 6.322712 TCTTGCTTGTATTACCAAAAACCTGT 59.677 34.615 0.00 0.00 0.00 4.00
3331 3509 5.837437 TGCTTGTATTACCAAAAACCTGTG 58.163 37.500 0.00 0.00 0.00 3.66
3332 3510 5.361285 TGCTTGTATTACCAAAAACCTGTGT 59.639 36.000 0.00 0.00 0.00 3.72
3333 3511 6.546403 TGCTTGTATTACCAAAAACCTGTGTA 59.454 34.615 0.00 0.00 0.00 2.90
3334 3512 7.081976 GCTTGTATTACCAAAAACCTGTGTAG 58.918 38.462 0.00 0.00 0.00 2.74
3335 3513 7.255346 GCTTGTATTACCAAAAACCTGTGTAGT 60.255 37.037 0.00 0.00 0.00 2.73
3336 3514 7.733402 TGTATTACCAAAAACCTGTGTAGTC 57.267 36.000 0.00 0.00 0.00 2.59
3337 3515 7.281098 TGTATTACCAAAAACCTGTGTAGTCA 58.719 34.615 0.00 0.00 0.00 3.41
3338 3516 6.877611 ATTACCAAAAACCTGTGTAGTCAG 57.122 37.500 0.00 0.00 35.45 3.51
3339 3517 4.230745 ACCAAAAACCTGTGTAGTCAGT 57.769 40.909 0.00 0.00 34.02 3.41
3340 3518 4.595986 ACCAAAAACCTGTGTAGTCAGTT 58.404 39.130 0.00 0.00 34.02 3.16
3341 3519 4.398044 ACCAAAAACCTGTGTAGTCAGTTG 59.602 41.667 0.00 0.00 34.02 3.16
3342 3520 4.638421 CCAAAAACCTGTGTAGTCAGTTGA 59.362 41.667 0.00 0.00 34.02 3.18
3343 3521 5.448632 CCAAAAACCTGTGTAGTCAGTTGAC 60.449 44.000 4.09 4.09 45.08 3.18
3353 3531 2.821991 GTCAGTTGACTACACTGCCT 57.178 50.000 5.04 0.00 41.65 4.75
3354 3532 2.678324 GTCAGTTGACTACACTGCCTC 58.322 52.381 5.04 0.00 41.65 4.70
3355 3533 2.297597 GTCAGTTGACTACACTGCCTCT 59.702 50.000 5.04 0.00 41.65 3.69
3356 3534 3.506455 GTCAGTTGACTACACTGCCTCTA 59.494 47.826 5.04 0.00 41.65 2.43
3357 3535 4.022242 GTCAGTTGACTACACTGCCTCTAA 60.022 45.833 5.04 0.00 41.65 2.10
3358 3536 4.218635 TCAGTTGACTACACTGCCTCTAAG 59.781 45.833 0.00 0.00 0.00 2.18
3359 3537 3.511934 AGTTGACTACACTGCCTCTAAGG 59.488 47.826 0.00 0.00 38.80 2.69
3360 3538 3.170991 TGACTACACTGCCTCTAAGGT 57.829 47.619 0.00 0.00 37.80 3.50
3361 3539 4.311520 TGACTACACTGCCTCTAAGGTA 57.688 45.455 0.00 0.00 37.80 3.08
3368 3546 2.035632 CTGCCTCTAAGGTAGTCCTGG 58.964 57.143 3.19 0.00 42.33 4.45
3369 3547 0.753867 GCCTCTAAGGTAGTCCTGGC 59.246 60.000 0.00 0.00 44.35 4.85
3370 3548 1.415200 CCTCTAAGGTAGTCCTGGCC 58.585 60.000 0.00 0.00 44.35 5.36
3371 3549 1.343075 CCTCTAAGGTAGTCCTGGCCA 60.343 57.143 4.71 4.71 44.35 5.36
3372 3550 2.683768 CTCTAAGGTAGTCCTGGCCAT 58.316 52.381 5.51 0.00 44.35 4.40
3373 3551 2.366916 CTCTAAGGTAGTCCTGGCCATG 59.633 54.545 5.51 2.84 44.35 3.66
3374 3552 1.417890 CTAAGGTAGTCCTGGCCATGG 59.582 57.143 5.51 7.63 44.35 3.66
3375 3553 1.281925 AAGGTAGTCCTGGCCATGGG 61.282 60.000 15.13 4.96 44.35 4.00
3410 3588 2.109181 GCGGATGGCCAGGTCTAC 59.891 66.667 13.05 0.00 34.80 2.59
3411 3589 2.435693 GCGGATGGCCAGGTCTACT 61.436 63.158 13.05 0.00 34.80 2.57
3412 3590 1.742768 CGGATGGCCAGGTCTACTC 59.257 63.158 13.05 0.79 0.00 2.59
3413 3591 0.757188 CGGATGGCCAGGTCTACTCT 60.757 60.000 13.05 0.00 0.00 3.24
3414 3592 1.478837 CGGATGGCCAGGTCTACTCTA 60.479 57.143 13.05 0.00 0.00 2.43
3415 3593 2.679082 GGATGGCCAGGTCTACTCTAA 58.321 52.381 13.05 0.00 0.00 2.10
3416 3594 2.630580 GGATGGCCAGGTCTACTCTAAG 59.369 54.545 13.05 0.00 0.00 2.18
3417 3595 2.160721 TGGCCAGGTCTACTCTAAGG 57.839 55.000 0.00 0.00 0.00 2.69
3418 3596 1.361543 TGGCCAGGTCTACTCTAAGGT 59.638 52.381 0.00 0.00 0.00 3.50
3419 3597 1.757699 GGCCAGGTCTACTCTAAGGTG 59.242 57.143 0.00 0.00 0.00 4.00
3420 3598 1.757699 GCCAGGTCTACTCTAAGGTGG 59.242 57.143 0.00 0.00 0.00 4.61
3421 3599 1.757699 CCAGGTCTACTCTAAGGTGGC 59.242 57.143 0.00 0.00 0.00 5.01
3422 3600 1.757699 CAGGTCTACTCTAAGGTGGCC 59.242 57.143 0.00 0.00 0.00 5.36
3423 3601 1.646977 AGGTCTACTCTAAGGTGGCCT 59.353 52.381 3.32 0.00 33.87 5.19
3424 3602 2.033372 GGTCTACTCTAAGGTGGCCTC 58.967 57.143 3.32 0.00 30.89 4.70
3425 3603 1.677052 GTCTACTCTAAGGTGGCCTCG 59.323 57.143 3.32 0.00 30.89 4.63
3426 3604 0.386113 CTACTCTAAGGTGGCCTCGC 59.614 60.000 3.32 0.00 30.89 5.03
3437 3615 2.970639 GCCTCGCCACTGAGTACA 59.029 61.111 0.00 0.00 34.04 2.90
3438 3616 1.292223 GCCTCGCCACTGAGTACAA 59.708 57.895 0.00 0.00 34.04 2.41
3439 3617 1.014564 GCCTCGCCACTGAGTACAAC 61.015 60.000 0.00 0.00 34.04 3.32
3440 3618 0.317160 CCTCGCCACTGAGTACAACA 59.683 55.000 0.00 0.00 34.04 3.33
3441 3619 1.066858 CCTCGCCACTGAGTACAACAT 60.067 52.381 0.00 0.00 34.04 2.71
3442 3620 2.263077 CTCGCCACTGAGTACAACATC 58.737 52.381 0.00 0.00 0.00 3.06
3443 3621 1.616374 TCGCCACTGAGTACAACATCA 59.384 47.619 0.00 0.00 0.00 3.07
3444 3622 2.036604 TCGCCACTGAGTACAACATCAA 59.963 45.455 0.00 0.00 0.00 2.57
3445 3623 3.002791 CGCCACTGAGTACAACATCAAT 58.997 45.455 0.00 0.00 0.00 2.57
3446 3624 3.181517 CGCCACTGAGTACAACATCAATG 60.182 47.826 0.00 0.00 0.00 2.82
3447 3625 4.002982 GCCACTGAGTACAACATCAATGA 58.997 43.478 0.00 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 9.965902 ATCAGTGTTATCCTTACAGAAGAAAAT 57.034 29.630 0.00 0.00 34.25 1.82
230 241 6.276832 ACAACGGTTAGTGAGTATACACAT 57.723 37.500 6.27 0.00 42.45 3.21
239 250 2.967362 TGGCATACAACGGTTAGTGAG 58.033 47.619 0.00 0.00 0.00 3.51
253 264 5.981088 AAAATCTCACACACATTGGCATA 57.019 34.783 0.00 0.00 0.00 3.14
300 311 5.582269 TGTACAAGAGCAATGAATAGCACTC 59.418 40.000 0.00 0.00 31.30 3.51
305 316 6.094603 AGCCTTTGTACAAGAGCAATGAATAG 59.905 38.462 25.05 10.35 0.00 1.73
313 324 2.229792 CCAAGCCTTTGTACAAGAGCA 58.770 47.619 25.05 6.20 32.21 4.26
314 325 1.068264 GCCAAGCCTTTGTACAAGAGC 60.068 52.381 19.05 19.05 32.21 4.09
373 384 3.633986 GCTGCCAAGCCAGTCTATTATTT 59.366 43.478 0.00 0.00 44.22 1.40
405 452 2.046604 TAGCAGCAGCAGCACCAG 60.047 61.111 12.92 0.00 45.49 4.00
406 453 2.359107 GTAGCAGCAGCAGCACCA 60.359 61.111 12.92 0.00 45.49 4.17
407 454 3.130160 GGTAGCAGCAGCAGCACC 61.130 66.667 12.92 13.02 45.49 5.01
408 455 3.494336 CGGTAGCAGCAGCAGCAC 61.494 66.667 12.92 8.01 45.49 4.40
409 456 2.913054 GATCGGTAGCAGCAGCAGCA 62.913 60.000 12.92 0.00 45.49 4.41
410 457 2.202987 ATCGGTAGCAGCAGCAGC 60.203 61.111 3.17 0.46 45.49 5.25
411 458 1.593750 GGATCGGTAGCAGCAGCAG 60.594 63.158 3.17 0.00 45.49 4.24
433 480 1.581934 TGAACTCGTGAAGCTTGTGG 58.418 50.000 2.10 0.00 0.00 4.17
445 492 1.376543 ATGGCAGCTCAATGAACTCG 58.623 50.000 0.00 0.00 0.00 4.18
463 510 4.373156 CCTAATTAGGCAGCCCAGTTAT 57.627 45.455 18.52 0.00 36.53 1.89
477 524 5.185249 ACTCTGTTTCAGTCGAGCCTAATTA 59.815 40.000 0.00 0.00 32.61 1.40
489 536 2.241176 TGACCCCAAACTCTGTTTCAGT 59.759 45.455 0.00 0.00 32.61 3.41
491 538 3.374042 TTGACCCCAAACTCTGTTTCA 57.626 42.857 0.00 0.00 0.00 2.69
514 561 7.746475 CGTCTGAAAATGAATTTTAGGTCACTC 59.254 37.037 1.10 0.00 39.86 3.51
516 563 7.581476 TCGTCTGAAAATGAATTTTAGGTCAC 58.419 34.615 1.10 0.00 39.86 3.67
518 565 9.065871 CAATCGTCTGAAAATGAATTTTAGGTC 57.934 33.333 1.10 0.00 39.86 3.85
519 566 8.792633 TCAATCGTCTGAAAATGAATTTTAGGT 58.207 29.630 1.10 0.00 39.86 3.08
520 567 9.065871 GTCAATCGTCTGAAAATGAATTTTAGG 57.934 33.333 1.10 0.00 39.86 2.69
521 568 9.065871 GGTCAATCGTCTGAAAATGAATTTTAG 57.934 33.333 1.10 1.45 39.86 1.85
522 569 8.572185 TGGTCAATCGTCTGAAAATGAATTTTA 58.428 29.630 1.10 0.00 39.86 1.52
533 580 2.094182 GGCTACTGGTCAATCGTCTGAA 60.094 50.000 0.00 0.00 0.00 3.02
538 585 1.204941 GACTGGCTACTGGTCAATCGT 59.795 52.381 0.00 0.00 0.00 3.73
540 587 2.497675 TGAGACTGGCTACTGGTCAATC 59.502 50.000 0.00 0.00 32.98 2.67
572 619 4.579340 TCTTATAGTCAGTTAGCCACTCGG 59.421 45.833 0.00 0.00 30.92 4.63
581 628 5.104374 CGGGCGTTTTCTTATAGTCAGTTA 58.896 41.667 0.00 0.00 0.00 2.24
582 629 3.930848 CGGGCGTTTTCTTATAGTCAGTT 59.069 43.478 0.00 0.00 0.00 3.16
583 630 3.194116 TCGGGCGTTTTCTTATAGTCAGT 59.806 43.478 0.00 0.00 0.00 3.41
584 631 3.550678 GTCGGGCGTTTTCTTATAGTCAG 59.449 47.826 0.00 0.00 0.00 3.51
585 632 3.056678 TGTCGGGCGTTTTCTTATAGTCA 60.057 43.478 0.00 0.00 0.00 3.41
586 633 3.514645 TGTCGGGCGTTTTCTTATAGTC 58.485 45.455 0.00 0.00 0.00 2.59
587 634 3.598019 TGTCGGGCGTTTTCTTATAGT 57.402 42.857 0.00 0.00 0.00 2.12
588 635 4.684703 CCTATGTCGGGCGTTTTCTTATAG 59.315 45.833 0.00 0.00 0.00 1.31
592 639 1.002773 ACCTATGTCGGGCGTTTTCTT 59.997 47.619 0.00 0.00 0.00 2.52
597 644 2.037144 AGATTACCTATGTCGGGCGTT 58.963 47.619 0.00 0.00 0.00 4.84
599 646 2.800544 CAAAGATTACCTATGTCGGGCG 59.199 50.000 0.00 0.00 0.00 6.13
602 649 2.800544 CGGCAAAGATTACCTATGTCGG 59.199 50.000 0.00 0.00 35.64 4.79
605 652 2.210116 CGCGGCAAAGATTACCTATGT 58.790 47.619 0.00 0.00 0.00 2.29
614 661 1.084289 GAAAGGTACGCGGCAAAGAT 58.916 50.000 12.47 0.00 0.00 2.40
646 702 1.424403 CGACCTAAACACGATGTGCA 58.576 50.000 0.00 0.00 36.98 4.57
647 703 0.719465 CCGACCTAAACACGATGTGC 59.281 55.000 0.00 0.00 36.98 4.57
652 708 2.610232 GGTAAAGCCGACCTAAACACGA 60.610 50.000 0.00 0.00 33.86 4.35
654 710 2.769893 TGGTAAAGCCGACCTAAACAC 58.230 47.619 1.41 0.00 41.21 3.32
655 711 3.181452 ACTTGGTAAAGCCGACCTAAACA 60.181 43.478 1.41 0.00 41.21 2.83
686 742 2.484065 CCACCTAAACCGAGTGTCAACA 60.484 50.000 0.00 0.00 0.00 3.33
703 759 1.299850 GTTTGCCGAAACAGCCACC 60.300 57.895 0.00 0.00 41.12 4.61
716 772 2.253452 CAGTGCTCGGCTGTTTGC 59.747 61.111 0.00 0.00 41.94 3.68
717 773 2.620112 CCCAGTGCTCGGCTGTTTG 61.620 63.158 0.00 0.00 32.41 2.93
718 774 2.281761 CCCAGTGCTCGGCTGTTT 60.282 61.111 0.00 0.00 32.41 2.83
721 777 4.790962 ATGCCCAGTGCTCGGCTG 62.791 66.667 9.12 0.00 45.90 4.85
722 778 4.790962 CATGCCCAGTGCTCGGCT 62.791 66.667 9.12 0.00 45.90 5.52
723 779 4.783621 TCATGCCCAGTGCTCGGC 62.784 66.667 0.77 0.77 45.92 5.54
724 780 2.046023 TTCATGCCCAGTGCTCGG 60.046 61.111 0.00 0.00 42.00 4.63
725 781 2.758089 GCTTCATGCCCAGTGCTCG 61.758 63.158 0.00 0.00 42.00 5.03
726 782 0.107508 TAGCTTCATGCCCAGTGCTC 60.108 55.000 0.00 0.00 44.23 4.26
727 783 0.549950 ATAGCTTCATGCCCAGTGCT 59.450 50.000 0.00 0.00 44.23 4.40
728 784 1.396653 AATAGCTTCATGCCCAGTGC 58.603 50.000 0.00 0.00 44.23 4.40
729 785 3.698040 AGAAAATAGCTTCATGCCCAGTG 59.302 43.478 0.00 0.00 44.23 3.66
730 786 3.698040 CAGAAAATAGCTTCATGCCCAGT 59.302 43.478 0.00 0.00 44.23 4.00
731 787 3.067742 CCAGAAAATAGCTTCATGCCCAG 59.932 47.826 0.00 0.00 44.23 4.45
732 788 3.025978 CCAGAAAATAGCTTCATGCCCA 58.974 45.455 0.00 0.00 44.23 5.36
733 789 3.026694 ACCAGAAAATAGCTTCATGCCC 58.973 45.455 0.00 0.00 44.23 5.36
734 790 4.884164 ACTACCAGAAAATAGCTTCATGCC 59.116 41.667 0.00 0.00 44.23 4.40
735 791 5.586243 TCACTACCAGAAAATAGCTTCATGC 59.414 40.000 0.00 0.00 43.29 4.06
736 792 7.798596 ATCACTACCAGAAAATAGCTTCATG 57.201 36.000 0.00 0.00 0.00 3.07
737 793 7.284034 CCAATCACTACCAGAAAATAGCTTCAT 59.716 37.037 0.00 0.00 0.00 2.57
738 794 6.599244 CCAATCACTACCAGAAAATAGCTTCA 59.401 38.462 0.00 0.00 0.00 3.02
739 795 6.823689 TCCAATCACTACCAGAAAATAGCTTC 59.176 38.462 0.00 0.00 0.00 3.86
740 796 6.599638 GTCCAATCACTACCAGAAAATAGCTT 59.400 38.462 0.00 0.00 0.00 3.74
741 797 6.116126 GTCCAATCACTACCAGAAAATAGCT 58.884 40.000 0.00 0.00 0.00 3.32
742 798 5.297029 GGTCCAATCACTACCAGAAAATAGC 59.703 44.000 0.00 0.00 33.28 2.97
743 799 6.414732 TGGTCCAATCACTACCAGAAAATAG 58.585 40.000 0.00 0.00 38.36 1.73
744 800 6.381498 TGGTCCAATCACTACCAGAAAATA 57.619 37.500 0.00 0.00 38.36 1.40
745 801 5.255397 TGGTCCAATCACTACCAGAAAAT 57.745 39.130 0.00 0.00 38.36 1.82
746 802 4.715534 TGGTCCAATCACTACCAGAAAA 57.284 40.909 0.00 0.00 38.36 2.29
747 803 4.715534 TTGGTCCAATCACTACCAGAAA 57.284 40.909 0.00 0.00 43.82 2.52
748 804 4.715534 TTTGGTCCAATCACTACCAGAA 57.284 40.909 4.80 0.00 43.82 3.02
749 805 4.927267 ATTTGGTCCAATCACTACCAGA 57.073 40.909 4.80 0.00 43.82 3.86
750 806 5.989477 TCTATTTGGTCCAATCACTACCAG 58.011 41.667 4.80 0.00 43.82 4.00
751 807 6.381498 TTCTATTTGGTCCAATCACTACCA 57.619 37.500 4.80 0.00 41.47 3.25
752 808 6.095021 GGTTTCTATTTGGTCCAATCACTACC 59.905 42.308 4.80 5.94 0.00 3.18
753 809 6.183360 CGGTTTCTATTTGGTCCAATCACTAC 60.183 42.308 4.80 0.54 0.00 2.73
754 810 5.878116 CGGTTTCTATTTGGTCCAATCACTA 59.122 40.000 4.80 0.00 0.00 2.74
755 811 4.700213 CGGTTTCTATTTGGTCCAATCACT 59.300 41.667 4.80 0.00 0.00 3.41
756 812 4.698304 TCGGTTTCTATTTGGTCCAATCAC 59.302 41.667 4.80 0.00 0.00 3.06
757 813 4.912586 TCGGTTTCTATTTGGTCCAATCA 58.087 39.130 4.80 0.00 0.00 2.57
758 814 5.676331 GCTTCGGTTTCTATTTGGTCCAATC 60.676 44.000 4.80 0.00 0.00 2.67
759 815 4.157840 GCTTCGGTTTCTATTTGGTCCAAT 59.842 41.667 4.80 0.00 0.00 3.16
760 816 3.504520 GCTTCGGTTTCTATTTGGTCCAA 59.495 43.478 0.00 0.00 0.00 3.53
761 817 3.078837 GCTTCGGTTTCTATTTGGTCCA 58.921 45.455 0.00 0.00 0.00 4.02
762 818 3.078837 TGCTTCGGTTTCTATTTGGTCC 58.921 45.455 0.00 0.00 0.00 4.46
763 819 4.156008 ACATGCTTCGGTTTCTATTTGGTC 59.844 41.667 0.00 0.00 0.00 4.02
764 820 4.079253 ACATGCTTCGGTTTCTATTTGGT 58.921 39.130 0.00 0.00 0.00 3.67
765 821 4.662145 GACATGCTTCGGTTTCTATTTGG 58.338 43.478 0.00 0.00 0.00 3.28
766 822 4.334443 CGACATGCTTCGGTTTCTATTTG 58.666 43.478 0.00 0.00 35.26 2.32
767 823 4.600012 CGACATGCTTCGGTTTCTATTT 57.400 40.909 0.00 0.00 35.26 1.40
777 833 0.521867 CAATGTGCCGACATGCTTCG 60.522 55.000 0.00 0.00 42.30 3.79
778 834 0.804364 TCAATGTGCCGACATGCTTC 59.196 50.000 0.00 0.00 42.30 3.86
779 835 1.133598 CATCAATGTGCCGACATGCTT 59.866 47.619 0.00 0.00 42.30 3.91
780 836 0.736636 CATCAATGTGCCGACATGCT 59.263 50.000 0.00 0.00 42.30 3.79
781 837 0.868602 GCATCAATGTGCCGACATGC 60.869 55.000 0.00 0.00 42.30 4.06
782 838 0.590481 CGCATCAATGTGCCGACATG 60.590 55.000 0.00 0.00 42.30 3.21
783 839 0.744057 TCGCATCAATGTGCCGACAT 60.744 50.000 0.00 0.00 45.24 3.06
784 840 0.952984 TTCGCATCAATGTGCCGACA 60.953 50.000 0.00 0.00 42.06 4.35
785 841 0.247814 CTTCGCATCAATGTGCCGAC 60.248 55.000 0.00 0.00 42.06 4.79
786 842 0.390998 TCTTCGCATCAATGTGCCGA 60.391 50.000 0.00 0.00 42.06 5.54
787 843 0.027194 CTCTTCGCATCAATGTGCCG 59.973 55.000 0.00 0.00 42.06 5.69
788 844 0.248377 GCTCTTCGCATCAATGTGCC 60.248 55.000 0.00 0.00 42.06 5.01
789 845 0.731417 AGCTCTTCGCATCAATGTGC 59.269 50.000 0.00 0.00 42.61 4.57
790 846 2.033065 GCTAGCTCTTCGCATCAATGTG 60.033 50.000 7.70 0.00 42.61 3.21
791 847 2.208431 GCTAGCTCTTCGCATCAATGT 58.792 47.619 7.70 0.00 42.61 2.71
792 848 1.530293 GGCTAGCTCTTCGCATCAATG 59.470 52.381 15.72 0.00 42.61 2.82
793 849 1.139654 TGGCTAGCTCTTCGCATCAAT 59.860 47.619 15.72 0.00 42.61 2.57
794 850 0.536724 TGGCTAGCTCTTCGCATCAA 59.463 50.000 15.72 0.00 42.61 2.57
795 851 0.536724 TTGGCTAGCTCTTCGCATCA 59.463 50.000 15.72 0.00 42.61 3.07
799 855 0.391793 AACCTTGGCTAGCTCTTCGC 60.392 55.000 15.72 0.00 39.57 4.70
889 957 3.937814 TCATGGAACGTGAATTAGCAGT 58.062 40.909 0.00 0.00 0.00 4.40
921 989 8.317891 TGGCGACTGTATTTATACCAATATTG 57.682 34.615 8.58 8.58 32.33 1.90
922 990 8.780249 GTTGGCGACTGTATTTATACCAATATT 58.220 33.333 0.00 0.00 32.33 1.28
923 991 8.154856 AGTTGGCGACTGTATTTATACCAATAT 58.845 33.333 6.59 0.00 37.17 1.28
924 992 7.502696 AGTTGGCGACTGTATTTATACCAATA 58.497 34.615 6.59 0.00 37.17 1.90
925 993 6.354130 AGTTGGCGACTGTATTTATACCAAT 58.646 36.000 6.59 0.00 37.17 3.16
926 994 5.736813 AGTTGGCGACTGTATTTATACCAA 58.263 37.500 6.59 0.00 37.17 3.67
927 995 5.105269 TGAGTTGGCGACTGTATTTATACCA 60.105 40.000 13.26 0.00 39.19 3.25
928 996 5.353938 TGAGTTGGCGACTGTATTTATACC 58.646 41.667 13.26 0.00 39.19 2.73
971 1039 3.115390 TGCTAGCTAGGGAAGATGGTTT 58.885 45.455 22.10 0.00 0.00 3.27
972 1040 2.764269 TGCTAGCTAGGGAAGATGGTT 58.236 47.619 22.10 0.00 0.00 3.67
1042 1110 1.732259 GACACGATGGAACACATGGTC 59.268 52.381 0.00 0.00 43.94 4.02
1119 1187 1.812922 CTGCGAGATCAGTGGTGGC 60.813 63.158 0.00 0.00 0.00 5.01
1454 1561 2.115911 GTGCCGTTGGTGGTGTTGA 61.116 57.895 0.00 0.00 0.00 3.18
1749 1869 4.379143 GCGTTCGCCGGGTTTGTC 62.379 66.667 2.18 0.00 36.94 3.18
1977 2103 6.867799 TGCGTTGAAAGCATTTAATATGTG 57.132 33.333 0.71 0.00 39.27 3.21
1978 2104 7.148656 GGTTTGCGTTGAAAGCATTTAATATGT 60.149 33.333 6.63 0.00 44.74 2.29
2007 2133 2.002586 CAGGAACTCTGTAATGGTGCG 58.997 52.381 0.00 0.00 34.60 5.34
2050 2194 3.367051 CTGCACGCCATTTCGGACG 62.367 63.158 0.00 0.00 39.35 4.79
2054 2198 2.753966 CCCTCTGCACGCCATTTCG 61.754 63.158 0.00 0.00 0.00 3.46
2243 2413 4.386951 CACATCGCCCCGTCCACA 62.387 66.667 0.00 0.00 0.00 4.17
2465 2635 4.681978 GTGGACAACGAGCCGGCT 62.682 66.667 33.48 33.48 0.00 5.52
2469 2639 0.591659 GAAAAGGTGGACAACGAGCC 59.408 55.000 0.00 0.00 0.00 4.70
2477 2647 2.024414 ACAACTGCTGAAAAGGTGGAC 58.976 47.619 0.00 0.00 36.63 4.02
2479 2649 4.647424 TTTACAACTGCTGAAAAGGTGG 57.353 40.909 0.00 0.00 36.63 4.61
2494 2664 6.039941 CCTGACAAACCCACATACTTTTACAA 59.960 38.462 0.00 0.00 0.00 2.41
2530 2700 5.784578 TGAAGTGACTATAGTGTGTGTGT 57.215 39.130 10.90 0.00 0.00 3.72
2531 2701 7.658179 AATTGAAGTGACTATAGTGTGTGTG 57.342 36.000 10.90 0.00 0.00 3.82
2541 2711 6.431234 GGTCCAAGTGAAATTGAAGTGACTAT 59.569 38.462 0.00 0.00 31.55 2.12
2566 2736 2.546789 GGTACAGTGAAAGTTCCAACCG 59.453 50.000 0.00 0.00 0.00 4.44
2571 2741 4.989168 CAGTACAGGTACAGTGAAAGTTCC 59.011 45.833 11.78 0.00 38.48 3.62
2586 2756 6.203915 TGTTTATTGCAAGTACACAGTACAGG 59.796 38.462 4.94 2.80 0.00 4.00
2652 2822 6.142480 GCGACTTACATACAGCTATTGTGTAG 59.858 42.308 5.81 5.81 41.10 2.74
2673 2843 1.389784 CAAATTGCAAATTCGGGCGAC 59.610 47.619 1.71 0.00 0.00 5.19
2709 2879 1.956477 GGCCAACTTGCTTCTTCTTCA 59.044 47.619 0.00 0.00 0.00 3.02
2740 2910 0.393673 GGCTGCTCCTTCCTTCCTTC 60.394 60.000 0.00 0.00 0.00 3.46
2743 2913 2.124942 CGGCTGCTCCTTCCTTCC 60.125 66.667 0.00 0.00 0.00 3.46
2757 2927 1.133407 CTAAGATAGATCTCCGGCGGC 59.867 57.143 23.83 7.19 35.76 6.53
2762 2932 2.494073 GCCACCCTAAGATAGATCTCCG 59.506 54.545 0.00 0.00 35.76 4.63
2801 2971 0.798771 CGAGCCTGTCACGCTAAGAC 60.799 60.000 0.00 0.00 36.48 3.01
2823 2993 3.256136 CCACACCCCTAAGATAGATCGTC 59.744 52.174 0.00 0.00 0.00 4.20
2865 3043 3.066760 CCCTGGCGAGGAACATAATTTTC 59.933 47.826 17.59 0.00 42.93 2.29
2869 3047 1.213296 ACCCTGGCGAGGAACATAAT 58.787 50.000 17.59 0.00 42.93 1.28
2872 3050 0.541863 CTAACCCTGGCGAGGAACAT 59.458 55.000 17.59 1.74 42.93 2.71
2879 3057 1.048724 CATCCCTCTAACCCTGGCGA 61.049 60.000 0.00 0.00 0.00 5.54
2880 3058 1.447643 CATCCCTCTAACCCTGGCG 59.552 63.158 0.00 0.00 0.00 5.69
2881 3059 1.839894 CCATCCCTCTAACCCTGGC 59.160 63.158 0.00 0.00 0.00 4.85
2882 3060 1.709994 GGCCATCCCTCTAACCCTGG 61.710 65.000 0.00 0.00 0.00 4.45
2883 3061 0.988145 TGGCCATCCCTCTAACCCTG 60.988 60.000 0.00 0.00 0.00 4.45
2884 3062 0.028642 ATGGCCATCCCTCTAACCCT 60.029 55.000 14.09 0.00 0.00 4.34
2885 3063 0.111253 CATGGCCATCCCTCTAACCC 59.889 60.000 17.61 0.00 0.00 4.11
2886 3064 0.111253 CCATGGCCATCCCTCTAACC 59.889 60.000 17.61 0.00 0.00 2.85
2887 3065 1.140312 TCCATGGCCATCCCTCTAAC 58.860 55.000 17.61 0.00 0.00 2.34
2888 3066 1.706866 CATCCATGGCCATCCCTCTAA 59.293 52.381 17.61 0.00 0.00 2.10
2889 3067 1.365293 CATCCATGGCCATCCCTCTA 58.635 55.000 17.61 0.00 0.00 2.43
2890 3068 1.432852 CCATCCATGGCCATCCCTCT 61.433 60.000 17.61 0.00 41.75 3.69
2891 3069 1.076192 CCATCCATGGCCATCCCTC 59.924 63.158 17.61 0.00 41.75 4.30
2892 3070 2.476078 CCCATCCATGGCCATCCCT 61.476 63.158 17.61 0.00 46.70 4.20
2893 3071 2.118951 CCCATCCATGGCCATCCC 59.881 66.667 17.61 0.00 46.70 3.85
2894 3072 2.602568 GCCCATCCATGGCCATCC 60.603 66.667 17.61 0.00 46.70 3.51
2901 3079 3.502621 ATCGCCTGGCCCATCCATG 62.503 63.158 14.12 0.00 45.50 3.66
2902 3080 3.180799 ATCGCCTGGCCCATCCAT 61.181 61.111 14.12 0.00 45.50 3.41
2903 3081 3.877450 GATCGCCTGGCCCATCCA 61.877 66.667 14.12 0.00 44.18 3.41
2904 3082 4.996434 CGATCGCCTGGCCCATCC 62.996 72.222 14.12 0.00 0.00 3.51
2905 3083 4.996434 CCGATCGCCTGGCCCATC 62.996 72.222 14.12 13.49 0.00 3.51
2935 3113 3.155167 CCTACCTCGCTGACCCCC 61.155 72.222 0.00 0.00 0.00 5.40
2936 3114 3.851128 GCCTACCTCGCTGACCCC 61.851 72.222 0.00 0.00 0.00 4.95
2937 3115 4.208686 CGCCTACCTCGCTGACCC 62.209 72.222 0.00 0.00 0.00 4.46
2944 3122 4.577246 GCTCCAGCGCCTACCTCG 62.577 72.222 2.29 0.00 0.00 4.63
2945 3123 3.461773 TGCTCCAGCGCCTACCTC 61.462 66.667 2.29 0.00 45.83 3.85
2946 3124 3.775654 GTGCTCCAGCGCCTACCT 61.776 66.667 2.29 0.00 45.15 3.08
2981 3159 3.723348 GACAAACCGCCTGCCGTC 61.723 66.667 0.00 0.00 34.38 4.79
2984 3162 2.966309 CTTCGACAAACCGCCTGCC 61.966 63.158 0.00 0.00 0.00 4.85
2985 3163 1.503818 TTCTTCGACAAACCGCCTGC 61.504 55.000 0.00 0.00 0.00 4.85
2986 3164 0.512952 CTTCTTCGACAAACCGCCTG 59.487 55.000 0.00 0.00 0.00 4.85
2987 3165 0.391597 TCTTCTTCGACAAACCGCCT 59.608 50.000 0.00 0.00 0.00 5.52
2988 3166 1.128692 CATCTTCTTCGACAAACCGCC 59.871 52.381 0.00 0.00 0.00 6.13
2989 3167 1.464189 GCATCTTCTTCGACAAACCGC 60.464 52.381 0.00 0.00 0.00 5.68
2990 3168 1.798223 TGCATCTTCTTCGACAAACCG 59.202 47.619 0.00 0.00 0.00 4.44
2991 3169 2.548057 TGTGCATCTTCTTCGACAAACC 59.452 45.455 0.00 0.00 0.00 3.27
2992 3170 3.364366 CCTGTGCATCTTCTTCGACAAAC 60.364 47.826 0.00 0.00 0.00 2.93
2993 3171 2.807967 CCTGTGCATCTTCTTCGACAAA 59.192 45.455 0.00 0.00 0.00 2.83
2994 3172 2.037121 TCCTGTGCATCTTCTTCGACAA 59.963 45.455 0.00 0.00 0.00 3.18
2995 3173 1.618343 TCCTGTGCATCTTCTTCGACA 59.382 47.619 0.00 0.00 0.00 4.35
2996 3174 2.094494 TCTCCTGTGCATCTTCTTCGAC 60.094 50.000 0.00 0.00 0.00 4.20
2997 3175 2.171003 TCTCCTGTGCATCTTCTTCGA 58.829 47.619 0.00 0.00 0.00 3.71
2998 3176 2.662006 TCTCCTGTGCATCTTCTTCG 57.338 50.000 0.00 0.00 0.00 3.79
2999 3177 4.405116 AGATCTCCTGTGCATCTTCTTC 57.595 45.455 0.00 0.00 0.00 2.87
3000 3178 4.515361 CAAGATCTCCTGTGCATCTTCTT 58.485 43.478 0.00 0.00 35.16 2.52
3001 3179 3.118334 CCAAGATCTCCTGTGCATCTTCT 60.118 47.826 0.00 0.00 35.16 2.85
3002 3180 3.204526 CCAAGATCTCCTGTGCATCTTC 58.795 50.000 0.00 0.00 35.16 2.87
3003 3181 2.683152 GCCAAGATCTCCTGTGCATCTT 60.683 50.000 0.00 0.00 37.35 2.40
3004 3182 1.134159 GCCAAGATCTCCTGTGCATCT 60.134 52.381 0.00 0.00 0.00 2.90
3005 3183 1.134159 AGCCAAGATCTCCTGTGCATC 60.134 52.381 0.00 0.00 0.00 3.91
3006 3184 0.917533 AGCCAAGATCTCCTGTGCAT 59.082 50.000 0.00 0.00 0.00 3.96
3007 3185 1.483827 CTAGCCAAGATCTCCTGTGCA 59.516 52.381 0.00 0.00 0.00 4.57
3008 3186 1.759445 TCTAGCCAAGATCTCCTGTGC 59.241 52.381 0.00 0.00 0.00 4.57
3009 3187 5.999205 ATATCTAGCCAAGATCTCCTGTG 57.001 43.478 0.00 0.00 44.17 3.66
3010 3188 8.497910 TTTAATATCTAGCCAAGATCTCCTGT 57.502 34.615 0.00 0.00 44.17 4.00
3011 3189 8.811017 TCTTTAATATCTAGCCAAGATCTCCTG 58.189 37.037 0.00 0.00 44.17 3.86
3012 3190 8.964533 TCTTTAATATCTAGCCAAGATCTCCT 57.035 34.615 0.00 0.00 44.17 3.69
3021 3199 8.307483 CGGATCTCTTTCTTTAATATCTAGCCA 58.693 37.037 0.00 0.00 0.00 4.75
3022 3200 7.762159 CCGGATCTCTTTCTTTAATATCTAGCC 59.238 40.741 0.00 0.00 0.00 3.93
3023 3201 7.276878 GCCGGATCTCTTTCTTTAATATCTAGC 59.723 40.741 5.05 0.00 0.00 3.42
3024 3202 7.762159 GGCCGGATCTCTTTCTTTAATATCTAG 59.238 40.741 5.05 0.00 0.00 2.43
3025 3203 7.577046 CGGCCGGATCTCTTTCTTTAATATCTA 60.577 40.741 20.10 0.00 0.00 1.98
3026 3204 6.468543 GGCCGGATCTCTTTCTTTAATATCT 58.531 40.000 5.05 0.00 0.00 1.98
3027 3205 5.348997 CGGCCGGATCTCTTTCTTTAATATC 59.651 44.000 20.10 0.00 0.00 1.63
3028 3206 5.221661 ACGGCCGGATCTCTTTCTTTAATAT 60.222 40.000 31.76 0.00 0.00 1.28
3029 3207 4.100498 ACGGCCGGATCTCTTTCTTTAATA 59.900 41.667 31.76 0.00 0.00 0.98
3030 3208 3.118371 ACGGCCGGATCTCTTTCTTTAAT 60.118 43.478 31.76 0.00 0.00 1.40
3031 3209 2.235402 ACGGCCGGATCTCTTTCTTTAA 59.765 45.455 31.76 0.00 0.00 1.52
3032 3210 1.829222 ACGGCCGGATCTCTTTCTTTA 59.171 47.619 31.76 0.00 0.00 1.85
3033 3211 0.613777 ACGGCCGGATCTCTTTCTTT 59.386 50.000 31.76 0.00 0.00 2.52
3034 3212 0.175989 GACGGCCGGATCTCTTTCTT 59.824 55.000 31.76 2.41 0.00 2.52
3035 3213 1.677637 GGACGGCCGGATCTCTTTCT 61.678 60.000 31.76 3.06 0.00 2.52
3036 3214 1.227292 GGACGGCCGGATCTCTTTC 60.227 63.158 31.76 14.97 0.00 2.62
3037 3215 1.338136 ATGGACGGCCGGATCTCTTT 61.338 55.000 31.76 4.91 36.79 2.52
3038 3216 1.338136 AATGGACGGCCGGATCTCTT 61.338 55.000 31.76 11.92 36.79 2.85
3039 3217 1.338136 AAATGGACGGCCGGATCTCT 61.338 55.000 31.76 6.78 36.79 3.10
3040 3218 0.463833 AAAATGGACGGCCGGATCTC 60.464 55.000 31.76 17.81 36.79 2.75
3041 3219 0.034477 AAAAATGGACGGCCGGATCT 60.034 50.000 31.76 8.20 36.79 2.75
3042 3220 0.380733 GAAAAATGGACGGCCGGATC 59.619 55.000 31.76 19.03 36.79 3.36
3043 3221 0.322997 TGAAAAATGGACGGCCGGAT 60.323 50.000 31.76 15.48 36.79 4.18
3044 3222 0.322997 ATGAAAAATGGACGGCCGGA 60.323 50.000 31.76 13.61 36.79 5.14
3045 3223 0.100503 GATGAAAAATGGACGGCCGG 59.899 55.000 31.76 11.88 36.79 6.13
3046 3224 0.100503 GGATGAAAAATGGACGGCCG 59.899 55.000 26.86 26.86 36.79 6.13
3047 3225 1.181786 TGGATGAAAAATGGACGGCC 58.818 50.000 0.00 0.00 0.00 6.13
3048 3226 2.606108 GTTGGATGAAAAATGGACGGC 58.394 47.619 0.00 0.00 0.00 5.68
3049 3227 2.415357 CCGTTGGATGAAAAATGGACGG 60.415 50.000 0.00 0.00 42.08 4.79
3050 3228 2.862512 CCGTTGGATGAAAAATGGACG 58.137 47.619 0.00 0.00 34.87 4.79
3051 3229 2.231235 AGCCGTTGGATGAAAAATGGAC 59.769 45.455 0.00 0.00 34.87 4.02
3052 3230 2.524306 AGCCGTTGGATGAAAAATGGA 58.476 42.857 0.00 0.00 34.87 3.41
3053 3231 3.317603 AAGCCGTTGGATGAAAAATGG 57.682 42.857 0.00 0.00 35.84 3.16
3054 3232 5.120053 GGTTTAAGCCGTTGGATGAAAAATG 59.880 40.000 0.00 0.00 0.00 2.32
3055 3233 5.221541 TGGTTTAAGCCGTTGGATGAAAAAT 60.222 36.000 3.70 0.00 0.00 1.82
3056 3234 4.099573 TGGTTTAAGCCGTTGGATGAAAAA 59.900 37.500 3.70 0.00 0.00 1.94
3057 3235 3.637229 TGGTTTAAGCCGTTGGATGAAAA 59.363 39.130 3.70 0.00 0.00 2.29
3058 3236 3.223435 TGGTTTAAGCCGTTGGATGAAA 58.777 40.909 3.70 0.00 0.00 2.69
3059 3237 2.865079 TGGTTTAAGCCGTTGGATGAA 58.135 42.857 3.70 0.00 0.00 2.57
3060 3238 2.570415 TGGTTTAAGCCGTTGGATGA 57.430 45.000 3.70 0.00 0.00 2.92
3061 3239 3.651803 TTTGGTTTAAGCCGTTGGATG 57.348 42.857 3.70 0.00 0.00 3.51
3062 3240 3.119637 CGATTTGGTTTAAGCCGTTGGAT 60.120 43.478 3.70 0.00 0.00 3.41
3063 3241 2.226912 CGATTTGGTTTAAGCCGTTGGA 59.773 45.455 3.70 0.00 0.00 3.53
3064 3242 2.226912 TCGATTTGGTTTAAGCCGTTGG 59.773 45.455 3.70 0.00 0.00 3.77
3065 3243 3.546002 TCGATTTGGTTTAAGCCGTTG 57.454 42.857 3.70 0.00 0.00 4.10
3066 3244 4.776795 AATCGATTTGGTTTAAGCCGTT 57.223 36.364 4.39 0.00 0.00 4.44
3067 3245 5.392272 GGTTAATCGATTTGGTTTAAGCCGT 60.392 40.000 17.19 0.00 0.00 5.68
3068 3246 5.032220 GGTTAATCGATTTGGTTTAAGCCG 58.968 41.667 17.19 0.00 0.00 5.52
3069 3247 5.105675 TGGGTTAATCGATTTGGTTTAAGCC 60.106 40.000 21.93 21.93 45.63 4.35
3070 3248 5.956642 TGGGTTAATCGATTTGGTTTAAGC 58.043 37.500 17.19 12.19 33.49 3.09
3071 3249 8.819643 TTTTGGGTTAATCGATTTGGTTTAAG 57.180 30.769 17.19 0.00 0.00 1.85
3098 3276 7.884877 TGACAATATCACAGTCCTCTGATTTTT 59.115 33.333 2.17 0.00 43.94 1.94
3099 3277 7.397221 TGACAATATCACAGTCCTCTGATTTT 58.603 34.615 2.17 0.00 43.94 1.82
3100 3278 6.950842 TGACAATATCACAGTCCTCTGATTT 58.049 36.000 2.17 0.00 43.94 2.17
3101 3279 6.550938 TGACAATATCACAGTCCTCTGATT 57.449 37.500 2.17 0.00 43.94 2.57
3118 3296 8.402472 CGAGTAGAAAGATAAGAGAGTGACAAT 58.598 37.037 0.00 0.00 0.00 2.71
3119 3297 7.390996 ACGAGTAGAAAGATAAGAGAGTGACAA 59.609 37.037 0.00 0.00 0.00 3.18
3120 3298 6.879993 ACGAGTAGAAAGATAAGAGAGTGACA 59.120 38.462 0.00 0.00 0.00 3.58
3121 3299 7.064847 TGACGAGTAGAAAGATAAGAGAGTGAC 59.935 40.741 0.00 0.00 0.00 3.67
3122 3300 7.104290 TGACGAGTAGAAAGATAAGAGAGTGA 58.896 38.462 0.00 0.00 0.00 3.41
3123 3301 7.310072 TGACGAGTAGAAAGATAAGAGAGTG 57.690 40.000 0.00 0.00 0.00 3.51
3124 3302 8.514330 AATGACGAGTAGAAAGATAAGAGAGT 57.486 34.615 0.00 0.00 0.00 3.24
3125 3303 9.796120 AAAATGACGAGTAGAAAGATAAGAGAG 57.204 33.333 0.00 0.00 0.00 3.20
3149 3327 4.584325 AGCTCTCCTGTATGTTTGCAAAAA 59.416 37.500 14.67 9.42 0.00 1.94
3150 3328 4.022935 CAGCTCTCCTGTATGTTTGCAAAA 60.023 41.667 14.67 5.00 36.79 2.44
3151 3329 3.503363 CAGCTCTCCTGTATGTTTGCAAA 59.497 43.478 8.05 8.05 36.79 3.68
3152 3330 3.076621 CAGCTCTCCTGTATGTTTGCAA 58.923 45.455 0.00 0.00 36.79 4.08
3153 3331 2.703416 CAGCTCTCCTGTATGTTTGCA 58.297 47.619 0.00 0.00 36.79 4.08
3154 3332 1.399791 GCAGCTCTCCTGTATGTTTGC 59.600 52.381 0.00 0.00 43.71 3.68
3155 3333 2.703416 TGCAGCTCTCCTGTATGTTTG 58.297 47.619 0.00 0.00 43.71 2.93
3156 3334 3.641434 ATGCAGCTCTCCTGTATGTTT 57.359 42.857 0.00 0.00 43.96 2.83
3157 3335 3.181461 GGTATGCAGCTCTCCTGTATGTT 60.181 47.826 0.00 0.00 45.02 2.71
3158 3336 2.366916 GGTATGCAGCTCTCCTGTATGT 59.633 50.000 0.00 0.00 45.02 2.29
3159 3337 2.366590 TGGTATGCAGCTCTCCTGTATG 59.633 50.000 0.00 0.00 45.02 2.39
3160 3338 2.682594 TGGTATGCAGCTCTCCTGTAT 58.317 47.619 0.00 0.01 46.68 2.29
3161 3339 2.159179 TGGTATGCAGCTCTCCTGTA 57.841 50.000 0.00 0.00 43.71 2.74
3162 3340 1.504912 ATGGTATGCAGCTCTCCTGT 58.495 50.000 0.00 0.00 43.71 4.00
3163 3341 2.634815 AATGGTATGCAGCTCTCCTG 57.365 50.000 0.00 0.00 44.67 3.86
3164 3342 4.989875 ATTAATGGTATGCAGCTCTCCT 57.010 40.909 0.00 0.00 0.00 3.69
3165 3343 6.936900 TCTTAATTAATGGTATGCAGCTCTCC 59.063 38.462 0.00 0.00 0.00 3.71
3166 3344 7.969536 TCTTAATTAATGGTATGCAGCTCTC 57.030 36.000 0.00 0.00 0.00 3.20
3167 3345 8.213679 TCTTCTTAATTAATGGTATGCAGCTCT 58.786 33.333 0.00 0.00 0.00 4.09
3168 3346 8.286097 GTCTTCTTAATTAATGGTATGCAGCTC 58.714 37.037 0.00 0.00 0.00 4.09
3169 3347 7.775093 TGTCTTCTTAATTAATGGTATGCAGCT 59.225 33.333 0.00 0.00 0.00 4.24
3170 3348 7.930217 TGTCTTCTTAATTAATGGTATGCAGC 58.070 34.615 0.00 0.00 0.00 5.25
3171 3349 9.330063 TCTGTCTTCTTAATTAATGGTATGCAG 57.670 33.333 0.00 3.07 0.00 4.41
3172 3350 9.851686 ATCTGTCTTCTTAATTAATGGTATGCA 57.148 29.630 0.00 0.00 0.00 3.96
3183 3361 9.877178 CTGGTTGTACTATCTGTCTTCTTAATT 57.123 33.333 0.00 0.00 0.00 1.40
3184 3362 9.036980 ACTGGTTGTACTATCTGTCTTCTTAAT 57.963 33.333 0.00 0.00 0.00 1.40
3185 3363 8.304596 CACTGGTTGTACTATCTGTCTTCTTAA 58.695 37.037 0.00 0.00 0.00 1.85
3186 3364 7.093902 CCACTGGTTGTACTATCTGTCTTCTTA 60.094 40.741 0.00 0.00 0.00 2.10
3187 3365 6.295349 CCACTGGTTGTACTATCTGTCTTCTT 60.295 42.308 0.00 0.00 0.00 2.52
3188 3366 5.186021 CCACTGGTTGTACTATCTGTCTTCT 59.814 44.000 0.00 0.00 0.00 2.85
3189 3367 5.411781 CCACTGGTTGTACTATCTGTCTTC 58.588 45.833 0.00 0.00 0.00 2.87
3190 3368 4.322801 GCCACTGGTTGTACTATCTGTCTT 60.323 45.833 0.00 0.00 0.00 3.01
3191 3369 3.195825 GCCACTGGTTGTACTATCTGTCT 59.804 47.826 0.00 0.00 0.00 3.41
3192 3370 3.522553 GCCACTGGTTGTACTATCTGTC 58.477 50.000 0.00 0.00 0.00 3.51
3193 3371 2.094182 CGCCACTGGTTGTACTATCTGT 60.094 50.000 0.00 0.00 0.00 3.41
3194 3372 2.540515 CGCCACTGGTTGTACTATCTG 58.459 52.381 0.00 0.00 0.00 2.90
3195 3373 1.480954 CCGCCACTGGTTGTACTATCT 59.519 52.381 0.00 0.00 0.00 1.98
3196 3374 1.479323 TCCGCCACTGGTTGTACTATC 59.521 52.381 0.00 0.00 0.00 2.08
3197 3375 1.480954 CTCCGCCACTGGTTGTACTAT 59.519 52.381 0.00 0.00 0.00 2.12
3198 3376 0.892755 CTCCGCCACTGGTTGTACTA 59.107 55.000 0.00 0.00 0.00 1.82
3199 3377 1.671742 CTCCGCCACTGGTTGTACT 59.328 57.895 0.00 0.00 0.00 2.73
3200 3378 2.033194 GCTCCGCCACTGGTTGTAC 61.033 63.158 0.00 0.00 0.00 2.90
3201 3379 2.345991 GCTCCGCCACTGGTTGTA 59.654 61.111 0.00 0.00 0.00 2.41
3212 3390 3.010420 AGAGTTTAAATCTTGGCTCCGC 58.990 45.455 0.00 0.00 0.00 5.54
3213 3391 4.003648 ACAGAGTTTAAATCTTGGCTCCG 58.996 43.478 0.00 0.00 0.00 4.63
3214 3392 4.762251 ACACAGAGTTTAAATCTTGGCTCC 59.238 41.667 0.00 0.00 0.00 4.70
3215 3393 5.948992 ACACAGAGTTTAAATCTTGGCTC 57.051 39.130 0.00 0.00 0.00 4.70
3216 3394 6.534634 ACTACACAGAGTTTAAATCTTGGCT 58.465 36.000 0.00 0.00 0.00 4.75
3217 3395 6.426937 TGACTACACAGAGTTTAAATCTTGGC 59.573 38.462 0.00 0.00 0.00 4.52
3218 3396 7.962964 TGACTACACAGAGTTTAAATCTTGG 57.037 36.000 0.00 0.00 0.00 3.61
3227 3405 9.950680 CAATTTTGTATTGACTACACAGAGTTT 57.049 29.630 0.00 0.00 40.06 2.66
3228 3406 9.120538 ACAATTTTGTATTGACTACACAGAGTT 57.879 29.630 4.64 0.00 40.06 3.01
3229 3407 8.559536 CACAATTTTGTATTGACTACACAGAGT 58.440 33.333 4.64 0.00 40.06 3.24
3230 3408 8.559536 ACACAATTTTGTATTGACTACACAGAG 58.440 33.333 0.00 0.00 40.06 3.35
3231 3409 8.445275 ACACAATTTTGTATTGACTACACAGA 57.555 30.769 0.00 0.00 40.06 3.41
3232 3410 9.811655 CTACACAATTTTGTATTGACTACACAG 57.188 33.333 4.96 0.00 40.06 3.66
3233 3411 9.332502 ACTACACAATTTTGTATTGACTACACA 57.667 29.630 4.96 0.00 40.06 3.72
3294 3472 9.364989 GGTAATACAAGCAAGAATTATGCAAAA 57.635 29.630 15.72 2.03 46.22 2.44
3295 3473 8.526978 TGGTAATACAAGCAAGAATTATGCAAA 58.473 29.630 15.72 0.00 46.22 3.68
3296 3474 8.060931 TGGTAATACAAGCAAGAATTATGCAA 57.939 30.769 15.72 2.03 46.22 4.08
3297 3475 7.637631 TGGTAATACAAGCAAGAATTATGCA 57.362 32.000 15.72 0.00 46.22 3.96
3298 3476 8.925161 TTTGGTAATACAAGCAAGAATTATGC 57.075 30.769 7.45 7.45 44.15 3.14
3301 3479 9.699703 GGTTTTTGGTAATACAAGCAAGAATTA 57.300 29.630 0.00 0.00 38.05 1.40
3302 3480 8.428852 AGGTTTTTGGTAATACAAGCAAGAATT 58.571 29.630 0.00 0.00 38.05 2.17
3303 3481 7.872483 CAGGTTTTTGGTAATACAAGCAAGAAT 59.128 33.333 0.00 0.00 38.05 2.40
3304 3482 7.147811 ACAGGTTTTTGGTAATACAAGCAAGAA 60.148 33.333 0.00 0.00 38.05 2.52
3305 3483 6.322712 ACAGGTTTTTGGTAATACAAGCAAGA 59.677 34.615 0.00 0.00 38.05 3.02
3306 3484 6.420604 CACAGGTTTTTGGTAATACAAGCAAG 59.579 38.462 0.00 0.00 38.05 4.01
3307 3485 6.127310 ACACAGGTTTTTGGTAATACAAGCAA 60.127 34.615 0.00 0.00 35.19 3.91
3308 3486 5.361285 ACACAGGTTTTTGGTAATACAAGCA 59.639 36.000 0.00 0.00 0.00 3.91
3309 3487 5.838529 ACACAGGTTTTTGGTAATACAAGC 58.161 37.500 0.00 0.00 0.00 4.01
3310 3488 8.161699 ACTACACAGGTTTTTGGTAATACAAG 57.838 34.615 0.00 0.00 0.00 3.16
3311 3489 7.774157 TGACTACACAGGTTTTTGGTAATACAA 59.226 33.333 0.00 0.00 0.00 2.41
3312 3490 7.281098 TGACTACACAGGTTTTTGGTAATACA 58.719 34.615 0.00 0.00 0.00 2.29
3313 3491 7.443272 ACTGACTACACAGGTTTTTGGTAATAC 59.557 37.037 0.00 0.00 41.59 1.89
3314 3492 7.511268 ACTGACTACACAGGTTTTTGGTAATA 58.489 34.615 0.00 0.00 41.59 0.98
3315 3493 6.362248 ACTGACTACACAGGTTTTTGGTAAT 58.638 36.000 0.00 0.00 41.59 1.89
3316 3494 5.747342 ACTGACTACACAGGTTTTTGGTAA 58.253 37.500 0.00 0.00 41.59 2.85
3317 3495 5.362105 ACTGACTACACAGGTTTTTGGTA 57.638 39.130 0.00 0.00 41.59 3.25
3318 3496 4.230745 ACTGACTACACAGGTTTTTGGT 57.769 40.909 0.00 0.00 41.59 3.67
3319 3497 4.638421 TCAACTGACTACACAGGTTTTTGG 59.362 41.667 0.00 0.00 41.59 3.28
3320 3498 5.569413 GTCAACTGACTACACAGGTTTTTG 58.431 41.667 2.51 0.00 41.65 2.44
3321 3499 5.813080 GTCAACTGACTACACAGGTTTTT 57.187 39.130 2.51 0.00 41.65 1.94
3334 3512 2.297597 AGAGGCAGTGTAGTCAACTGAC 59.702 50.000 7.72 4.51 45.08 3.51
3335 3513 2.598565 AGAGGCAGTGTAGTCAACTGA 58.401 47.619 7.72 0.00 33.65 3.41
3336 3514 4.489810 CTTAGAGGCAGTGTAGTCAACTG 58.510 47.826 0.00 0.00 34.83 3.16
3337 3515 3.511934 CCTTAGAGGCAGTGTAGTCAACT 59.488 47.826 0.00 0.00 0.00 3.16
3338 3516 3.258622 ACCTTAGAGGCAGTGTAGTCAAC 59.741 47.826 0.00 0.00 39.63 3.18
3339 3517 3.507411 ACCTTAGAGGCAGTGTAGTCAA 58.493 45.455 0.00 0.00 39.63 3.18
3340 3518 3.170991 ACCTTAGAGGCAGTGTAGTCA 57.829 47.619 0.00 0.00 39.63 3.41
3341 3519 4.271661 ACTACCTTAGAGGCAGTGTAGTC 58.728 47.826 0.00 0.00 40.43 2.59
3342 3520 4.271661 GACTACCTTAGAGGCAGTGTAGT 58.728 47.826 4.62 0.00 41.97 2.73
3343 3521 3.633065 GGACTACCTTAGAGGCAGTGTAG 59.367 52.174 4.62 0.00 41.97 2.74
3344 3522 3.268856 AGGACTACCTTAGAGGCAGTGTA 59.731 47.826 4.62 0.00 41.97 2.90
3345 3523 2.043252 AGGACTACCTTAGAGGCAGTGT 59.957 50.000 4.62 0.00 41.97 3.55
3346 3524 2.428890 CAGGACTACCTTAGAGGCAGTG 59.571 54.545 4.62 0.00 41.97 3.66
3347 3525 2.624557 CCAGGACTACCTTAGAGGCAGT 60.625 54.545 0.00 0.00 44.53 4.40
3348 3526 2.035632 CCAGGACTACCTTAGAGGCAG 58.964 57.143 0.00 0.00 45.36 4.85
3349 3527 1.965318 GCCAGGACTACCTTAGAGGCA 60.965 57.143 9.46 0.00 45.37 4.75
3350 3528 0.753867 GCCAGGACTACCTTAGAGGC 59.246 60.000 0.00 0.00 45.36 4.70
3351 3529 1.343075 TGGCCAGGACTACCTTAGAGG 60.343 57.143 0.00 0.00 45.36 3.69
3352 3530 2.160721 TGGCCAGGACTACCTTAGAG 57.839 55.000 0.00 0.00 45.36 2.43
3353 3531 2.398588 CATGGCCAGGACTACCTTAGA 58.601 52.381 13.35 0.00 45.36 2.10
3354 3532 1.417890 CCATGGCCAGGACTACCTTAG 59.582 57.143 21.32 0.00 45.36 2.18
3355 3533 1.507140 CCATGGCCAGGACTACCTTA 58.493 55.000 21.32 0.00 45.36 2.69
3356 3534 1.281925 CCCATGGCCAGGACTACCTT 61.282 60.000 21.32 0.00 45.36 3.50
3358 3536 2.919043 CCCATGGCCAGGACTACC 59.081 66.667 21.32 0.00 0.00 3.18
3359 3537 2.193248 GCCCATGGCCAGGACTAC 59.807 66.667 21.32 0.65 44.06 2.73
3393 3571 2.109181 GTAGACCTGGCCATCCGC 59.891 66.667 5.51 0.00 34.14 5.54
3394 3572 0.757188 AGAGTAGACCTGGCCATCCG 60.757 60.000 5.51 0.00 34.14 4.18
3395 3573 2.383442 TAGAGTAGACCTGGCCATCC 57.617 55.000 5.51 0.00 0.00 3.51
3396 3574 2.630580 CCTTAGAGTAGACCTGGCCATC 59.369 54.545 5.51 0.76 0.00 3.51
3397 3575 2.022918 ACCTTAGAGTAGACCTGGCCAT 60.023 50.000 5.51 0.00 0.00 4.40
3398 3576 1.361543 ACCTTAGAGTAGACCTGGCCA 59.638 52.381 4.71 4.71 0.00 5.36
3399 3577 1.757699 CACCTTAGAGTAGACCTGGCC 59.242 57.143 0.00 0.00 0.00 5.36
3400 3578 1.757699 CCACCTTAGAGTAGACCTGGC 59.242 57.143 0.00 0.00 0.00 4.85
3401 3579 1.757699 GCCACCTTAGAGTAGACCTGG 59.242 57.143 0.00 0.00 0.00 4.45
3402 3580 1.757699 GGCCACCTTAGAGTAGACCTG 59.242 57.143 0.00 0.00 0.00 4.00
3403 3581 1.646977 AGGCCACCTTAGAGTAGACCT 59.353 52.381 5.01 0.00 0.00 3.85
3404 3582 2.033372 GAGGCCACCTTAGAGTAGACC 58.967 57.143 5.01 0.00 31.76 3.85
3405 3583 1.677052 CGAGGCCACCTTAGAGTAGAC 59.323 57.143 5.01 0.00 31.76 2.59
3406 3584 2.022754 GCGAGGCCACCTTAGAGTAGA 61.023 57.143 5.01 0.00 31.76 2.59
3407 3585 0.386113 GCGAGGCCACCTTAGAGTAG 59.614 60.000 5.01 0.00 31.76 2.57
3408 3586 2.501492 GCGAGGCCACCTTAGAGTA 58.499 57.895 5.01 0.00 31.76 2.59
3409 3587 3.300013 GCGAGGCCACCTTAGAGT 58.700 61.111 5.01 0.00 31.76 3.24
3420 3598 1.014564 GTTGTACTCAGTGGCGAGGC 61.015 60.000 0.00 0.00 37.34 4.70
3421 3599 0.317160 TGTTGTACTCAGTGGCGAGG 59.683 55.000 0.00 0.00 37.34 4.63
3422 3600 2.263077 GATGTTGTACTCAGTGGCGAG 58.737 52.381 0.00 0.00 39.05 5.03
3423 3601 1.616374 TGATGTTGTACTCAGTGGCGA 59.384 47.619 0.00 0.00 0.00 5.54
3424 3602 2.078849 TGATGTTGTACTCAGTGGCG 57.921 50.000 0.00 0.00 0.00 5.69
3425 3603 4.002982 TCATTGATGTTGTACTCAGTGGC 58.997 43.478 5.79 0.00 31.98 5.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.