Multiple sequence alignment - TraesCS3B01G501900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G501900 chr3B 100.000 3913 0 0 1 3913 745612478 745608566 0.000000e+00 7227.0
1 TraesCS3B01G501900 chr3B 88.946 389 40 1 3526 3911 191182026 191181638 9.840000e-131 477.0
2 TraesCS3B01G501900 chr3A 89.544 1712 128 25 1694 3374 697013734 697012043 0.000000e+00 2122.0
3 TraesCS3B01G501900 chr3A 84.611 1592 111 62 1 1518 697015374 697013843 0.000000e+00 1459.0
4 TraesCS3B01G501900 chr3A 93.750 64 4 0 3425 3488 697011697 697011634 3.220000e-16 97.1
5 TraesCS3B01G501900 chr3D 85.844 1102 111 21 2290 3361 560942126 560941040 0.000000e+00 1129.0
6 TraesCS3B01G501900 chr3D 89.305 748 28 19 45 764 560944431 560943708 0.000000e+00 891.0
7 TraesCS3B01G501900 chr3D 88.268 716 54 19 801 1508 560943700 560943007 0.000000e+00 830.0
8 TraesCS3B01G501900 chr3D 90.569 615 40 9 1694 2295 560942900 560942291 0.000000e+00 798.0
9 TraesCS3B01G501900 chr3D 84.713 157 16 5 3362 3516 560941010 560940860 2.440000e-32 150.0
10 TraesCS3B01G501900 chr4B 93.350 391 23 1 3526 3913 510852210 510852600 3.390000e-160 575.0
11 TraesCS3B01G501900 chrUn 85.269 577 52 19 1247 1809 362208872 362208315 7.340000e-157 564.0
12 TraesCS3B01G501900 chrUn 86.561 253 22 4 617 866 362209296 362209053 6.440000e-68 268.0
13 TraesCS3B01G501900 chrUn 90.972 144 10 2 617 760 303188123 303187983 1.440000e-44 191.0
14 TraesCS3B01G501900 chr1B 85.269 577 52 19 1247 1809 59503340 59503897 7.340000e-157 564.0
15 TraesCS3B01G501900 chr1B 85.269 577 52 19 1247 1809 59523032 59523589 7.340000e-157 564.0
16 TraesCS3B01G501900 chr1B 86.957 253 21 4 617 866 59502916 59503159 1.390000e-69 274.0
17 TraesCS3B01G501900 chr1B 86.561 253 22 4 617 866 59522608 59522851 6.440000e-68 268.0
18 TraesCS3B01G501900 chr5B 92.228 386 26 2 3526 3908 689098964 689098580 9.560000e-151 544.0
19 TraesCS3B01G501900 chr5B 94.345 336 16 1 3576 3908 682836599 682836264 2.700000e-141 512.0
20 TraesCS3B01G501900 chr5B 89.175 388 39 1 3528 3912 127694541 127694154 7.600000e-132 481.0
21 TraesCS3B01G501900 chr1D 89.295 383 38 2 3526 3905 107198449 107198831 9.840000e-131 477.0
22 TraesCS3B01G501900 chr6B 88.747 391 41 1 3526 3913 261702658 261703048 3.540000e-130 475.0
23 TraesCS3B01G501900 chr5D 88.718 390 41 2 3526 3912 335909306 335908917 1.270000e-129 473.0
24 TraesCS3B01G501900 chr2B 88.144 388 43 1 3528 3912 142551987 142552374 3.560000e-125 459.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G501900 chr3B 745608566 745612478 3912 True 7227.000000 7227 100.000000 1 3913 1 chr3B.!!$R2 3912
1 TraesCS3B01G501900 chr3A 697011634 697015374 3740 True 1226.033333 2122 89.301667 1 3488 3 chr3A.!!$R1 3487
2 TraesCS3B01G501900 chr3D 560940860 560944431 3571 True 759.600000 1129 87.739800 45 3516 5 chr3D.!!$R1 3471
3 TraesCS3B01G501900 chrUn 362208315 362209296 981 True 416.000000 564 85.915000 617 1809 2 chrUn.!!$R2 1192
4 TraesCS3B01G501900 chr1B 59502916 59503897 981 False 419.000000 564 86.113000 617 1809 2 chr1B.!!$F1 1192
5 TraesCS3B01G501900 chr1B 59522608 59523589 981 False 416.000000 564 85.915000 617 1809 2 chr1B.!!$F2 1192

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
403 423 0.764369 AAGGTCAGGACAGCCACTGA 60.764 55.0 0.78 0.0 41.13 3.41 F
1212 1334 0.179156 CGCTTCATCCGCTGCAATTT 60.179 50.0 0.00 0.0 0.00 1.82 F
1997 2136 0.036875 GAGCAGCCAAAGGTACTGGT 59.963 55.0 1.96 0.0 44.29 4.00 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1391 1514 0.107165 GGAGGCCCATGTACACCTTC 60.107 60.0 0.0 0.0 30.95 3.46 R
2335 2668 0.108992 TGCGTAACGGTCAGATGGTC 60.109 55.0 0.0 0.0 0.00 4.02 R
3583 4275 0.032678 CTGGATCATCGACGGGAAGG 59.967 60.0 0.0 0.0 0.00 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
24 25 1.766496 ACCTCGTTTTCCTCAAGGTGA 59.234 47.619 0.00 0.00 38.88 4.02
67 68 3.513680 TGACGCGATAATGTACTTGGT 57.486 42.857 15.93 0.00 0.00 3.67
91 92 4.202131 ACGATACCGGATCCTTCTCTTTTC 60.202 45.833 9.46 0.00 40.78 2.29
117 118 3.128764 AGCAAGTATCTTCACGATCGACA 59.871 43.478 24.34 4.17 33.48 4.35
177 181 8.616076 CCCAATTTGCACTAGTTTATAGAAGAG 58.384 37.037 0.00 0.00 0.00 2.85
193 197 2.559381 AGAGGTATCTGGAAGCAGGT 57.441 50.000 0.00 0.00 33.30 4.00
197 201 6.721953 AGAGGTATCTGGAAGCAGGTAGCA 62.722 50.000 0.00 0.00 39.29 3.49
303 315 8.667592 TCATGAGATCTCTATCATCATCCTTT 57.332 34.615 22.95 0.00 33.91 3.11
342 357 1.207089 CTATCACAGCCGGGTCAAAGA 59.793 52.381 1.27 0.00 0.00 2.52
383 403 2.094659 CACGTTGACAGCTAGCCCG 61.095 63.158 12.13 5.56 0.00 6.13
401 421 1.821061 CGAAGGTCAGGACAGCCACT 61.821 60.000 1.41 0.00 36.29 4.00
403 423 0.764369 AAGGTCAGGACAGCCACTGA 60.764 55.000 0.78 0.00 41.13 3.41
494 530 0.877213 CCCGTTCGTTCGTTTCACCT 60.877 55.000 0.00 0.00 0.00 4.00
496 532 1.071041 CCGTTCGTTCGTTTCACCTTC 60.071 52.381 0.00 0.00 0.00 3.46
498 534 2.283351 CGTTCGTTCGTTTCACCTTCTT 59.717 45.455 0.00 0.00 0.00 2.52
499 535 3.600909 CGTTCGTTCGTTTCACCTTCTTC 60.601 47.826 0.00 0.00 0.00 2.87
500 536 3.167921 TCGTTCGTTTCACCTTCTTCA 57.832 42.857 0.00 0.00 0.00 3.02
501 537 2.861935 TCGTTCGTTTCACCTTCTTCAC 59.138 45.455 0.00 0.00 0.00 3.18
502 538 2.033151 CGTTCGTTTCACCTTCTTCACC 60.033 50.000 0.00 0.00 0.00 4.02
544 580 1.364626 GCTTCCTCTCCACGTGCATG 61.365 60.000 10.91 3.82 0.00 4.06
545 581 1.364626 CTTCCTCTCCACGTGCATGC 61.365 60.000 11.82 11.82 0.00 4.06
546 582 3.190849 CCTCTCCACGTGCATGCG 61.191 66.667 14.09 1.59 37.94 4.73
547 583 3.857854 CTCTCCACGTGCATGCGC 61.858 66.667 21.37 21.37 39.24 6.09
597 641 5.534407 GCCATGTGCATTCATTTCATATCA 58.466 37.500 0.00 0.00 40.77 2.15
598 642 5.633601 GCCATGTGCATTCATTTCATATCAG 59.366 40.000 0.00 0.00 40.77 2.90
658 722 0.976641 TGTTCCTCCTCTGATTGCGT 59.023 50.000 0.00 0.00 0.00 5.24
668 739 1.409064 TCTGATTGCGTACCAGCTAGG 59.591 52.381 0.00 0.00 45.67 3.02
764 862 1.055338 CGTACGTTTCTTGGTCCGAC 58.945 55.000 7.22 0.00 0.00 4.79
788 886 2.401195 GCCGCTGCTCGACAATTC 59.599 61.111 0.00 0.00 41.67 2.17
792 890 1.284657 CGCTGCTCGACAATTCATCT 58.715 50.000 0.00 0.00 41.67 2.90
793 891 2.463876 CGCTGCTCGACAATTCATCTA 58.536 47.619 0.00 0.00 41.67 1.98
866 967 1.226156 CTCTCCGTCGTCGCTCTTG 60.226 63.158 0.00 0.00 35.54 3.02
969 1070 3.798639 TTCTTGGTTTGCGTGCGCG 62.799 57.895 16.86 16.86 45.51 6.86
1020 1121 3.436055 GCATTGCCAACCGCGGTA 61.436 61.111 34.44 16.93 42.08 4.02
1090 1191 2.281070 CTGCGGTCTGTTGCTGGT 60.281 61.111 0.00 0.00 0.00 4.00
1095 1196 1.374947 GGTCTGTTGCTGGTGGCTA 59.625 57.895 0.00 0.00 42.39 3.93
1097 1198 1.003355 TCTGTTGCTGGTGGCTAGC 60.003 57.895 6.04 6.04 42.39 3.42
1152 1253 1.738099 CGAAACTCCTCCCACGCTG 60.738 63.158 0.00 0.00 0.00 5.18
1180 1287 3.560636 AACTGACACCAGCAAAGTAGT 57.439 42.857 0.00 0.00 44.16 2.73
1181 1288 4.682778 AACTGACACCAGCAAAGTAGTA 57.317 40.909 0.00 0.00 44.16 1.82
1184 1291 2.367241 TGACACCAGCAAAGTAGTAGCA 59.633 45.455 0.00 0.00 0.00 3.49
1189 1296 3.684788 ACCAGCAAAGTAGTAGCAATTCG 59.315 43.478 0.00 0.00 0.00 3.34
1190 1297 3.485877 CCAGCAAAGTAGTAGCAATTCGC 60.486 47.826 0.00 0.00 42.91 4.70
1212 1334 0.179156 CGCTTCATCCGCTGCAATTT 60.179 50.000 0.00 0.00 0.00 1.82
1213 1335 1.733389 CGCTTCATCCGCTGCAATTTT 60.733 47.619 0.00 0.00 0.00 1.82
1229 1351 3.669354 TTTTTGCGCATTTTCCCGT 57.331 42.105 12.75 0.00 0.00 5.28
1230 1352 2.795175 TTTTTGCGCATTTTCCCGTA 57.205 40.000 12.75 0.00 0.00 4.02
1231 1353 2.795175 TTTTGCGCATTTTCCCGTAA 57.205 40.000 12.75 0.00 0.00 3.18
1232 1354 2.053282 TTTGCGCATTTTCCCGTAAC 57.947 45.000 12.75 0.00 0.00 2.50
1233 1355 1.240256 TTGCGCATTTTCCCGTAACT 58.760 45.000 12.75 0.00 0.00 2.24
1234 1356 2.096220 TGCGCATTTTCCCGTAACTA 57.904 45.000 5.66 0.00 0.00 2.24
1254 1377 6.063640 ACTAACGTTTTGTATGTTTGGTCC 57.936 37.500 5.91 0.00 37.22 4.46
1486 1609 3.050703 TCGTCGACGAGGTACCTAC 57.949 57.895 34.97 8.12 44.22 3.18
1489 1612 1.464608 CGTCGACGAGGTACCTACAAA 59.535 52.381 33.35 0.00 43.02 2.83
1496 1619 4.084287 ACGAGGTACCTACAAACATCTGA 58.916 43.478 16.29 0.00 0.00 3.27
1499 1622 6.106673 CGAGGTACCTACAAACATCTGAAAT 58.893 40.000 16.29 0.00 0.00 2.17
1508 1631 6.981762 ACAAACATCTGAAATCTCTGCTAG 57.018 37.500 0.00 0.00 0.00 3.42
1509 1632 5.353678 ACAAACATCTGAAATCTCTGCTAGC 59.646 40.000 8.10 8.10 0.00 3.42
1513 1636 4.652421 TCTGAAATCTCTGCTAGCTCAG 57.348 45.455 17.23 17.34 35.46 3.35
1518 1641 1.479709 TCTCTGCTAGCTCAGGAACC 58.520 55.000 17.23 0.00 34.91 3.62
1519 1642 1.189752 CTCTGCTAGCTCAGGAACCA 58.810 55.000 17.23 0.00 34.91 3.67
1526 1651 1.356124 AGCTCAGGAACCAGTGACAT 58.644 50.000 0.00 0.00 0.00 3.06
1528 1653 1.677217 GCTCAGGAACCAGTGACATCC 60.677 57.143 0.00 0.00 0.00 3.51
1537 1662 1.747355 CCAGTGACATCCCTGCATTTC 59.253 52.381 0.00 0.00 0.00 2.17
1538 1663 1.747355 CAGTGACATCCCTGCATTTCC 59.253 52.381 0.00 0.00 0.00 3.13
1539 1664 1.637553 AGTGACATCCCTGCATTTCCT 59.362 47.619 0.00 0.00 0.00 3.36
1542 1667 2.242965 TGACATCCCTGCATTTCCTCAT 59.757 45.455 0.00 0.00 0.00 2.90
1581 1706 3.850122 AAAACTGGCTAGATTTTCGCC 57.150 42.857 3.17 0.00 44.02 5.54
1606 1731 6.157211 TCGACAAGGAAGTAATTGAACTCTC 58.843 40.000 0.00 0.00 0.00 3.20
1614 1739 9.310449 AGGAAGTAATTGAACTCTCTACTTACA 57.690 33.333 5.54 0.00 36.35 2.41
1615 1740 9.356433 GGAAGTAATTGAACTCTCTACTTACAC 57.644 37.037 0.00 0.00 34.75 2.90
1616 1741 9.356433 GAAGTAATTGAACTCTCTACTTACACC 57.644 37.037 0.00 0.00 33.94 4.16
1622 1747 6.309357 TGAACTCTCTACTTACACCCTTACA 58.691 40.000 0.00 0.00 0.00 2.41
1628 1753 3.930634 ACTTACACCCTTACACGAGAC 57.069 47.619 0.00 0.00 0.00 3.36
1629 1754 2.227388 ACTTACACCCTTACACGAGACG 59.773 50.000 0.00 0.00 0.00 4.18
1630 1755 2.183478 TACACCCTTACACGAGACGA 57.817 50.000 0.00 0.00 0.00 4.20
1633 1758 1.136147 CCCTTACACGAGACGACGG 59.864 63.158 0.00 0.00 37.61 4.79
1634 1759 1.580845 CCCTTACACGAGACGACGGT 61.581 60.000 0.00 0.00 37.61 4.83
1635 1760 0.239347 CCTTACACGAGACGACGGTT 59.761 55.000 0.00 0.00 37.61 4.44
1636 1761 1.599992 CTTACACGAGACGACGGTTC 58.400 55.000 0.00 0.00 37.61 3.62
1640 1765 0.109919 CACGAGACGACGGTTCATGA 60.110 55.000 0.00 0.00 37.61 3.07
1644 1769 2.028045 CGAGACGACGGTTCATGAATTG 59.972 50.000 12.12 9.68 0.00 2.32
1645 1770 2.993899 GAGACGACGGTTCATGAATTGT 59.006 45.455 12.12 12.90 0.00 2.71
1646 1771 2.993899 AGACGACGGTTCATGAATTGTC 59.006 45.455 23.06 23.06 0.00 3.18
1647 1772 2.993899 GACGACGGTTCATGAATTGTCT 59.006 45.455 26.76 18.95 0.00 3.41
1648 1773 2.993899 ACGACGGTTCATGAATTGTCTC 59.006 45.455 26.76 10.72 0.00 3.36
1649 1774 3.254060 CGACGGTTCATGAATTGTCTCT 58.746 45.455 26.76 6.14 0.00 3.10
1650 1775 3.061295 CGACGGTTCATGAATTGTCTCTG 59.939 47.826 26.76 15.79 0.00 3.35
1651 1776 3.997021 GACGGTTCATGAATTGTCTCTGT 59.003 43.478 24.52 16.52 0.00 3.41
1652 1777 5.147330 ACGGTTCATGAATTGTCTCTGTA 57.853 39.130 12.12 0.00 0.00 2.74
1673 1798 2.300152 ACTTGACTGAATTCGCCTCTCA 59.700 45.455 0.04 0.00 0.00 3.27
1675 1800 1.066858 TGACTGAATTCGCCTCTCACC 60.067 52.381 0.04 0.00 0.00 4.02
1684 1809 2.750657 GCCTCTCACCTCATGGGGG 61.751 68.421 18.14 10.25 40.68 5.40
1685 1810 1.307343 CCTCTCACCTCATGGGGGT 60.307 63.158 18.14 10.94 40.09 4.95
1686 1811 0.916358 CCTCTCACCTCATGGGGGTT 60.916 60.000 18.14 0.00 40.09 4.11
1687 1812 0.995024 CTCTCACCTCATGGGGGTTT 59.005 55.000 18.14 0.00 40.09 3.27
1688 1813 0.991920 TCTCACCTCATGGGGGTTTC 59.008 55.000 18.14 0.00 40.09 2.78
1689 1814 0.698238 CTCACCTCATGGGGGTTTCA 59.302 55.000 18.14 0.00 40.09 2.69
1690 1815 1.285962 CTCACCTCATGGGGGTTTCAT 59.714 52.381 18.14 0.00 40.09 2.57
1700 1837 1.549037 GGGGGTTTCATTGTGCAGGTA 60.549 52.381 0.00 0.00 0.00 3.08
1879 2018 3.779759 ACAAATTCGAAGCAGCAAACAA 58.220 36.364 3.35 0.00 0.00 2.83
1882 2021 0.383949 TTCGAAGCAGCAAACAACCC 59.616 50.000 0.00 0.00 0.00 4.11
1891 2030 1.066454 AGCAAACAACCCAACGCTAAC 59.934 47.619 0.00 0.00 0.00 2.34
1992 2131 0.107703 CATCGGAGCAGCCAAAGGTA 60.108 55.000 0.00 0.00 35.94 3.08
1993 2132 0.107654 ATCGGAGCAGCCAAAGGTAC 60.108 55.000 0.00 0.00 35.94 3.34
1997 2136 0.036875 GAGCAGCCAAAGGTACTGGT 59.963 55.000 1.96 0.00 44.29 4.00
2001 2140 2.433436 CAGCCAAAGGTACTGGTAACC 58.567 52.381 1.96 0.00 40.86 2.85
2066 2227 5.537188 GAGTGTCTGAACTCTGAACTTCAT 58.463 41.667 10.67 0.00 42.78 2.57
2194 2355 4.500116 GAGTCGACCGGCTGCTCC 62.500 72.222 13.01 0.00 0.00 4.70
2287 2449 2.104792 TGTCTGAAACTCTGAACCCTGG 59.895 50.000 0.00 0.00 0.00 4.45
2303 2635 2.014857 CCTGGACATCATTCTGCAGTG 58.985 52.381 14.67 5.73 0.00 3.66
2304 2636 2.355412 CCTGGACATCATTCTGCAGTGA 60.355 50.000 14.67 11.65 0.00 3.41
2322 2655 1.151668 GAATGTCTGCTGCGTCAACT 58.848 50.000 0.00 0.00 0.00 3.16
2335 2668 2.455032 CGTCAACTCCGCTCTTATCTG 58.545 52.381 0.00 0.00 0.00 2.90
2336 2669 2.097629 CGTCAACTCCGCTCTTATCTGA 59.902 50.000 0.00 0.00 0.00 3.27
2337 2670 3.440228 GTCAACTCCGCTCTTATCTGAC 58.560 50.000 0.00 0.00 0.00 3.51
2338 2671 2.427453 TCAACTCCGCTCTTATCTGACC 59.573 50.000 0.00 0.00 0.00 4.02
2339 2672 2.145397 ACTCCGCTCTTATCTGACCA 57.855 50.000 0.00 0.00 0.00 4.02
2340 2673 2.672098 ACTCCGCTCTTATCTGACCAT 58.328 47.619 0.00 0.00 0.00 3.55
2341 2674 2.625790 ACTCCGCTCTTATCTGACCATC 59.374 50.000 0.00 0.00 0.00 3.51
2342 2675 2.890311 CTCCGCTCTTATCTGACCATCT 59.110 50.000 0.00 0.00 0.00 2.90
2506 2839 4.348168 ACCTCTCGCTCATTGGGTAATTAT 59.652 41.667 0.00 0.00 0.00 1.28
2521 2858 8.918202 TGGGTAATTATTCAGTGATACCAATC 57.082 34.615 17.60 5.42 0.00 2.67
2625 2969 9.034800 TCATCCAAAATTAAGCTAAATCCAACT 57.965 29.630 0.00 0.00 0.00 3.16
2644 2988 9.944376 ATCCAACTATTACATTATATTGACGCT 57.056 29.630 1.71 0.00 0.00 5.07
2653 2997 7.715265 ACATTATATTGACGCTAGTTTCCTG 57.285 36.000 1.71 0.00 0.00 3.86
2663 3007 2.421424 GCTAGTTTCCTGCTGAATGTGG 59.579 50.000 0.00 0.00 31.67 4.17
2673 3017 0.322277 CTGAATGTGGCAGCTGGAGT 60.322 55.000 17.12 0.00 0.00 3.85
2678 3022 2.917227 TGGCAGCTGGAGTCGTCA 60.917 61.111 17.12 0.00 0.00 4.35
2723 3067 4.704833 GGCGGCAGCTTCACCTCA 62.705 66.667 9.17 0.00 44.37 3.86
2741 3085 1.126488 CAGAGGGCATGAAGGAGCTA 58.874 55.000 0.00 0.00 0.00 3.32
2744 3088 1.069978 GAGGGCATGAAGGAGCTAGTC 59.930 57.143 0.00 0.00 0.00 2.59
2747 3091 0.249657 GCATGAAGGAGCTAGTCGGG 60.250 60.000 0.00 0.00 0.00 5.14
2940 3286 4.630940 CCAATATTTGTTGCCACAATGGAC 59.369 41.667 13.25 0.00 42.66 4.02
2958 3304 1.189227 GACATTTTTGTGTTTCGCGGC 59.811 47.619 6.13 0.00 31.16 6.53
3011 3357 3.509442 AGCATCAGTTGAATTCCCCAAA 58.491 40.909 2.27 0.00 0.00 3.28
3035 3381 2.166459 TCGAGCTGGAAATGAAGACGAT 59.834 45.455 0.00 0.00 0.00 3.73
3036 3382 3.380320 TCGAGCTGGAAATGAAGACGATA 59.620 43.478 0.00 0.00 0.00 2.92
3039 3391 4.384056 AGCTGGAAATGAAGACGATATGG 58.616 43.478 0.00 0.00 0.00 2.74
3097 3449 2.361438 GTGGGTATAGGAGGACTTCACG 59.639 54.545 0.00 0.00 0.00 4.35
3098 3450 2.242965 TGGGTATAGGAGGACTTCACGA 59.757 50.000 0.00 0.00 0.00 4.35
3111 3463 4.691216 GGACTTCACGAGTGCTAAGAAAAT 59.309 41.667 10.40 0.00 42.85 1.82
3118 3470 3.947834 CGAGTGCTAAGAAAATGGGGAAT 59.052 43.478 0.00 0.00 0.00 3.01
3136 3488 4.290722 GGGAATGATGGTTAGAGGGATGAT 59.709 45.833 0.00 0.00 0.00 2.45
3170 3522 3.161450 GGACCGGCATAGGAGGCA 61.161 66.667 0.00 0.00 34.73 4.75
3174 3526 0.689745 ACCGGCATAGGAGGCAGTTA 60.690 55.000 0.00 0.00 34.73 2.24
3178 3530 1.768870 GGCATAGGAGGCAGTTAAGGA 59.231 52.381 0.00 0.00 0.00 3.36
3179 3531 2.224402 GGCATAGGAGGCAGTTAAGGAG 60.224 54.545 0.00 0.00 0.00 3.69
3224 3593 0.178921 TTGCAGGGGTTTGGCCAATA 60.179 50.000 21.26 7.66 39.65 1.90
3225 3594 0.614415 TGCAGGGGTTTGGCCAATAG 60.614 55.000 21.26 6.96 39.65 1.73
3237 3606 4.545706 CAATAGAGGCGGGCGGCA 62.546 66.667 19.08 0.00 46.16 5.69
3238 3607 3.792736 AATAGAGGCGGGCGGCAA 61.793 61.111 19.08 1.47 46.16 4.52
3251 3620 1.966762 CGGCAAAACCATGGAAGCT 59.033 52.632 21.47 0.00 39.03 3.74
3258 3627 1.238439 AACCATGGAAGCTGTTGTCG 58.762 50.000 21.47 0.00 0.00 4.35
3286 3655 0.804933 GACGAAGGGGAAATCGACCG 60.805 60.000 1.84 0.00 41.43 4.79
3287 3656 1.217244 CGAAGGGGAAATCGACCGT 59.783 57.895 0.00 0.00 41.43 4.83
3296 3665 4.374399 GGGAAATCGACCGTTGTATGTAT 58.626 43.478 0.00 0.00 0.00 2.29
3352 3721 9.544314 CCATTTTGTTTTGTACATTTGCATATG 57.456 29.630 14.68 14.68 36.44 1.78
3376 3774 4.968259 AGCAACTGGTTGTGTACATTCTA 58.032 39.130 13.85 0.00 42.31 2.10
3384 3782 8.350722 ACTGGTTGTGTACATTCTATATACTCG 58.649 37.037 0.00 0.00 0.00 4.18
3401 3799 2.165845 ACTCGATACAAAAGTCGGGAGG 59.834 50.000 1.27 0.00 40.68 4.30
3403 3801 3.355378 TCGATACAAAAGTCGGGAGGTA 58.645 45.455 0.00 0.00 38.34 3.08
3405 3803 4.403432 TCGATACAAAAGTCGGGAGGTAAT 59.597 41.667 0.00 0.00 38.34 1.89
3406 3804 4.506654 CGATACAAAAGTCGGGAGGTAATG 59.493 45.833 0.00 0.00 34.39 1.90
3408 3806 4.360951 ACAAAAGTCGGGAGGTAATGAA 57.639 40.909 0.00 0.00 0.00 2.57
3409 3807 4.324267 ACAAAAGTCGGGAGGTAATGAAG 58.676 43.478 0.00 0.00 0.00 3.02
3469 4161 0.246635 TGGACTCGCAAGGCTAGTTC 59.753 55.000 0.00 0.00 34.76 3.01
3488 4180 0.096976 CCGCGGCTTGAAACATACTG 59.903 55.000 14.67 0.00 0.00 2.74
3490 4182 1.996898 CGCGGCTTGAAACATACTGTA 59.003 47.619 0.00 0.00 0.00 2.74
3491 4183 2.222729 CGCGGCTTGAAACATACTGTAC 60.223 50.000 0.00 0.00 0.00 2.90
3492 4184 3.000727 GCGGCTTGAAACATACTGTACT 58.999 45.455 0.00 0.00 0.00 2.73
3493 4185 4.178540 GCGGCTTGAAACATACTGTACTA 58.821 43.478 0.00 0.00 0.00 1.82
3494 4186 4.809426 GCGGCTTGAAACATACTGTACTAT 59.191 41.667 0.00 0.00 0.00 2.12
3495 4187 5.981315 GCGGCTTGAAACATACTGTACTATA 59.019 40.000 0.00 0.00 0.00 1.31
3504 4196 9.448294 GAAACATACTGTACTATAAAGTCTCCG 57.552 37.037 0.00 0.00 37.15 4.63
3508 4200 2.961062 TGTACTATAAAGTCTCCGGGCC 59.039 50.000 0.00 0.00 37.15 5.80
3516 4208 1.153147 GTCTCCGGGCCTGAATTCC 60.153 63.158 15.09 0.00 0.00 3.01
3517 4209 1.615124 TCTCCGGGCCTGAATTCCA 60.615 57.895 15.09 0.00 0.00 3.53
3518 4210 0.988145 TCTCCGGGCCTGAATTCCAT 60.988 55.000 15.09 0.00 0.00 3.41
3519 4211 0.820891 CTCCGGGCCTGAATTCCATG 60.821 60.000 15.09 0.00 0.00 3.66
3520 4212 1.829533 CCGGGCCTGAATTCCATGG 60.830 63.158 15.09 4.97 0.00 3.66
3521 4213 1.227102 CGGGCCTGAATTCCATGGA 59.773 57.895 11.44 11.44 0.00 3.41
3522 4214 0.820891 CGGGCCTGAATTCCATGGAG 60.821 60.000 15.53 3.09 0.00 3.86
3523 4215 1.111715 GGGCCTGAATTCCATGGAGC 61.112 60.000 15.53 13.46 0.00 4.70
3524 4216 1.450531 GGCCTGAATTCCATGGAGCG 61.451 60.000 15.53 2.96 0.00 5.03
3525 4217 1.450531 GCCTGAATTCCATGGAGCGG 61.451 60.000 15.53 12.95 0.00 5.52
3526 4218 1.450531 CCTGAATTCCATGGAGCGGC 61.451 60.000 15.53 6.77 0.00 6.53
3527 4219 1.779025 CTGAATTCCATGGAGCGGCG 61.779 60.000 15.53 0.51 0.00 6.46
3528 4220 1.523711 GAATTCCATGGAGCGGCGA 60.524 57.895 15.53 0.00 0.00 5.54
3529 4221 0.886490 GAATTCCATGGAGCGGCGAT 60.886 55.000 15.53 2.76 0.00 4.58
3530 4222 0.466189 AATTCCATGGAGCGGCGATT 60.466 50.000 15.53 7.89 0.00 3.34
3531 4223 0.466189 ATTCCATGGAGCGGCGATTT 60.466 50.000 15.53 0.00 0.00 2.17
3532 4224 0.679640 TTCCATGGAGCGGCGATTTT 60.680 50.000 15.53 0.00 0.00 1.82
3533 4225 0.679640 TCCATGGAGCGGCGATTTTT 60.680 50.000 11.44 0.00 0.00 1.94
3565 4257 4.968197 GACGAAGACGAGGTTGCT 57.032 55.556 0.00 0.00 42.66 3.91
3566 4258 3.196613 GACGAAGACGAGGTTGCTT 57.803 52.632 0.00 0.00 42.66 3.91
3567 4259 1.061485 GACGAAGACGAGGTTGCTTC 58.939 55.000 0.00 0.00 42.66 3.86
3568 4260 0.387929 ACGAAGACGAGGTTGCTTCA 59.612 50.000 0.00 0.00 42.66 3.02
3569 4261 1.202486 ACGAAGACGAGGTTGCTTCAA 60.202 47.619 0.00 0.00 42.66 2.69
3570 4262 1.192534 CGAAGACGAGGTTGCTTCAAC 59.807 52.381 0.00 1.33 41.45 3.18
3579 4271 2.553079 GTTGCTTCAACCGTTGACAA 57.447 45.000 13.61 12.31 39.87 3.18
3580 4272 2.450160 GTTGCTTCAACCGTTGACAAG 58.550 47.619 13.61 10.50 39.87 3.16
3581 4273 2.031258 TGCTTCAACCGTTGACAAGA 57.969 45.000 13.61 0.00 39.87 3.02
3582 4274 2.571212 TGCTTCAACCGTTGACAAGAT 58.429 42.857 13.61 0.00 39.87 2.40
3583 4275 2.548057 TGCTTCAACCGTTGACAAGATC 59.452 45.455 13.61 0.00 39.87 2.75
3584 4276 2.095718 GCTTCAACCGTTGACAAGATCC 60.096 50.000 13.61 0.00 39.87 3.36
3585 4277 3.403038 CTTCAACCGTTGACAAGATCCT 58.597 45.455 13.61 0.00 39.87 3.24
3586 4278 3.485463 TCAACCGTTGACAAGATCCTT 57.515 42.857 9.99 0.00 34.08 3.36
3587 4279 3.399330 TCAACCGTTGACAAGATCCTTC 58.601 45.455 9.99 0.00 34.08 3.46
3588 4280 2.474410 ACCGTTGACAAGATCCTTCC 57.526 50.000 0.00 0.00 0.00 3.46
3589 4281 1.003233 ACCGTTGACAAGATCCTTCCC 59.997 52.381 0.00 0.00 0.00 3.97
3590 4282 1.359848 CGTTGACAAGATCCTTCCCG 58.640 55.000 0.00 0.00 0.00 5.14
3591 4283 1.337823 CGTTGACAAGATCCTTCCCGT 60.338 52.381 0.00 0.00 0.00 5.28
3592 4284 2.347731 GTTGACAAGATCCTTCCCGTC 58.652 52.381 0.00 0.00 0.00 4.79
3593 4285 0.530744 TGACAAGATCCTTCCCGTCG 59.469 55.000 0.00 0.00 0.00 5.12
3594 4286 0.815734 GACAAGATCCTTCCCGTCGA 59.184 55.000 0.00 0.00 0.00 4.20
3595 4287 1.409427 GACAAGATCCTTCCCGTCGAT 59.591 52.381 0.00 0.00 0.00 3.59
3596 4288 1.137086 ACAAGATCCTTCCCGTCGATG 59.863 52.381 0.00 0.00 0.00 3.84
3597 4289 1.409064 CAAGATCCTTCCCGTCGATGA 59.591 52.381 6.11 0.00 0.00 2.92
3598 4290 2.002505 AGATCCTTCCCGTCGATGAT 57.997 50.000 6.11 0.00 0.00 2.45
3599 4291 1.889829 AGATCCTTCCCGTCGATGATC 59.110 52.381 6.11 0.00 32.84 2.92
3600 4292 0.969894 ATCCTTCCCGTCGATGATCC 59.030 55.000 6.11 0.00 0.00 3.36
3601 4293 0.396556 TCCTTCCCGTCGATGATCCA 60.397 55.000 6.11 0.00 0.00 3.41
3602 4294 0.032678 CCTTCCCGTCGATGATCCAG 59.967 60.000 6.11 0.00 0.00 3.86
3603 4295 0.598680 CTTCCCGTCGATGATCCAGC 60.599 60.000 6.11 0.00 0.00 4.85
3604 4296 2.349969 TTCCCGTCGATGATCCAGCG 62.350 60.000 6.11 0.00 44.93 5.18
3610 4302 3.470520 CGATGATCCAGCGAGAGTC 57.529 57.895 0.00 0.00 46.56 3.36
3611 4303 0.385348 CGATGATCCAGCGAGAGTCG 60.385 60.000 0.00 0.00 46.56 4.18
3612 4304 0.039617 GATGATCCAGCGAGAGTCGG 60.040 60.000 0.00 0.00 40.84 4.79
3613 4305 1.459455 ATGATCCAGCGAGAGTCGGG 61.459 60.000 0.00 0.00 40.84 5.14
3614 4306 3.492311 GATCCAGCGAGAGTCGGGC 62.492 68.421 0.00 0.74 40.84 6.13
3615 4307 4.742649 TCCAGCGAGAGTCGGGCT 62.743 66.667 5.29 5.29 40.84 5.19
3616 4308 3.764466 CCAGCGAGAGTCGGGCTT 61.764 66.667 8.07 0.00 40.84 4.35
3617 4309 2.202676 CAGCGAGAGTCGGGCTTC 60.203 66.667 8.07 0.00 40.84 3.86
3618 4310 2.676822 AGCGAGAGTCGGGCTTCA 60.677 61.111 5.29 0.00 40.84 3.02
3619 4311 2.055042 AGCGAGAGTCGGGCTTCAT 61.055 57.895 5.29 0.00 40.84 2.57
3620 4312 1.880340 GCGAGAGTCGGGCTTCATG 60.880 63.158 0.00 0.00 40.84 3.07
3621 4313 1.880340 CGAGAGTCGGGCTTCATGC 60.880 63.158 0.00 0.00 36.00 4.06
3622 4314 1.880340 GAGAGTCGGGCTTCATGCG 60.880 63.158 0.00 0.00 44.05 4.73
3623 4315 2.892425 GAGTCGGGCTTCATGCGG 60.892 66.667 0.00 0.00 44.05 5.69
3624 4316 4.473520 AGTCGGGCTTCATGCGGG 62.474 66.667 0.00 0.00 44.05 6.13
3628 4320 4.883354 GGGCTTCATGCGGGGGAG 62.883 72.222 0.00 0.00 44.05 4.30
3629 4321 3.797353 GGCTTCATGCGGGGGAGA 61.797 66.667 0.00 0.00 44.05 3.71
3630 4322 2.514824 GCTTCATGCGGGGGAGAC 60.515 66.667 0.00 0.00 0.00 3.36
3631 4323 3.036429 GCTTCATGCGGGGGAGACT 62.036 63.158 0.00 0.00 0.00 3.24
3632 4324 1.686325 GCTTCATGCGGGGGAGACTA 61.686 60.000 0.00 0.00 0.00 2.59
3633 4325 1.051812 CTTCATGCGGGGGAGACTAT 58.948 55.000 0.00 0.00 0.00 2.12
3634 4326 0.758734 TTCATGCGGGGGAGACTATG 59.241 55.000 0.00 0.00 0.00 2.23
3635 4327 1.121407 TCATGCGGGGGAGACTATGG 61.121 60.000 0.00 0.00 0.00 2.74
3636 4328 1.121407 CATGCGGGGGAGACTATGGA 61.121 60.000 0.00 0.00 0.00 3.41
3637 4329 0.833834 ATGCGGGGGAGACTATGGAG 60.834 60.000 0.00 0.00 0.00 3.86
3638 4330 1.152525 GCGGGGGAGACTATGGAGA 60.153 63.158 0.00 0.00 0.00 3.71
3639 4331 0.543174 GCGGGGGAGACTATGGAGAT 60.543 60.000 0.00 0.00 0.00 2.75
3640 4332 1.261480 CGGGGGAGACTATGGAGATG 58.739 60.000 0.00 0.00 0.00 2.90
3641 4333 1.481428 CGGGGGAGACTATGGAGATGT 60.481 57.143 0.00 0.00 0.00 3.06
3642 4334 2.695585 GGGGGAGACTATGGAGATGTT 58.304 52.381 0.00 0.00 0.00 2.71
3643 4335 2.370189 GGGGGAGACTATGGAGATGTTG 59.630 54.545 0.00 0.00 0.00 3.33
3644 4336 2.224402 GGGGAGACTATGGAGATGTTGC 60.224 54.545 0.00 0.00 0.00 4.17
3645 4337 2.435805 GGGAGACTATGGAGATGTTGCA 59.564 50.000 0.00 0.00 0.00 4.08
3646 4338 3.494048 GGGAGACTATGGAGATGTTGCAG 60.494 52.174 0.00 0.00 0.00 4.41
3647 4339 3.129871 GAGACTATGGAGATGTTGCAGC 58.870 50.000 0.00 0.00 0.00 5.25
3648 4340 1.863454 GACTATGGAGATGTTGCAGCG 59.137 52.381 0.00 0.00 0.00 5.18
3649 4341 1.224075 CTATGGAGATGTTGCAGCGG 58.776 55.000 0.00 0.00 0.00 5.52
3650 4342 0.179048 TATGGAGATGTTGCAGCGGG 60.179 55.000 0.00 0.00 0.00 6.13
3651 4343 2.045926 GGAGATGTTGCAGCGGGT 60.046 61.111 0.00 0.00 0.00 5.28
3652 4344 1.220749 GGAGATGTTGCAGCGGGTA 59.779 57.895 0.00 0.00 0.00 3.69
3653 4345 0.811616 GGAGATGTTGCAGCGGGTAG 60.812 60.000 0.00 0.00 0.00 3.18
3654 4346 0.108138 GAGATGTTGCAGCGGGTAGT 60.108 55.000 0.00 0.00 0.00 2.73
3655 4347 0.324943 AGATGTTGCAGCGGGTAGTT 59.675 50.000 0.00 0.00 0.00 2.24
3656 4348 0.727398 GATGTTGCAGCGGGTAGTTC 59.273 55.000 0.00 0.00 0.00 3.01
3657 4349 0.036164 ATGTTGCAGCGGGTAGTTCA 59.964 50.000 0.00 0.00 0.00 3.18
3658 4350 0.882927 TGTTGCAGCGGGTAGTTCAC 60.883 55.000 0.00 0.00 0.00 3.18
3666 4358 3.866356 GGTAGTTCACCGGCGAAC 58.134 61.111 24.65 24.65 44.63 3.95
3705 4397 3.291611 CTGGAAGGGTGCATTGCC 58.708 61.111 6.12 0.00 0.00 4.52
3706 4398 1.304713 CTGGAAGGGTGCATTGCCT 60.305 57.895 6.12 0.00 0.00 4.75
3707 4399 0.034186 CTGGAAGGGTGCATTGCCTA 60.034 55.000 6.12 0.00 0.00 3.93
3708 4400 0.407528 TGGAAGGGTGCATTGCCTAA 59.592 50.000 6.12 0.00 0.00 2.69
3709 4401 1.106285 GGAAGGGTGCATTGCCTAAG 58.894 55.000 6.12 0.00 0.00 2.18
3710 4402 1.106285 GAAGGGTGCATTGCCTAAGG 58.894 55.000 6.12 0.00 0.00 2.69
3711 4403 0.409484 AAGGGTGCATTGCCTAAGGT 59.591 50.000 6.12 0.00 0.00 3.50
3712 4404 1.295020 AGGGTGCATTGCCTAAGGTA 58.705 50.000 6.12 0.00 0.00 3.08
3713 4405 1.852965 AGGGTGCATTGCCTAAGGTAT 59.147 47.619 6.12 0.00 0.00 2.73
3714 4406 1.956477 GGGTGCATTGCCTAAGGTATG 59.044 52.381 6.12 0.00 0.00 2.39
3715 4407 2.654863 GGTGCATTGCCTAAGGTATGT 58.345 47.619 6.12 0.00 0.00 2.29
3716 4408 2.618709 GGTGCATTGCCTAAGGTATGTC 59.381 50.000 6.12 0.00 0.00 3.06
3717 4409 3.545703 GTGCATTGCCTAAGGTATGTCT 58.454 45.455 6.12 0.00 0.00 3.41
3718 4410 3.561725 GTGCATTGCCTAAGGTATGTCTC 59.438 47.826 6.12 0.00 0.00 3.36
3719 4411 3.142174 GCATTGCCTAAGGTATGTCTCC 58.858 50.000 0.00 0.00 0.00 3.71
3720 4412 3.744660 CATTGCCTAAGGTATGTCTCCC 58.255 50.000 0.00 0.00 0.00 4.30
3721 4413 1.410004 TGCCTAAGGTATGTCTCCCG 58.590 55.000 0.00 0.00 0.00 5.14
3722 4414 1.063492 TGCCTAAGGTATGTCTCCCGA 60.063 52.381 0.00 0.00 0.00 5.14
3723 4415 2.037144 GCCTAAGGTATGTCTCCCGAA 58.963 52.381 0.00 0.00 0.00 4.30
3724 4416 2.633481 GCCTAAGGTATGTCTCCCGAAT 59.367 50.000 0.00 0.00 0.00 3.34
3725 4417 3.071167 GCCTAAGGTATGTCTCCCGAATT 59.929 47.826 0.00 0.00 0.00 2.17
3726 4418 4.444449 GCCTAAGGTATGTCTCCCGAATTT 60.444 45.833 0.00 0.00 0.00 1.82
3727 4419 5.057149 CCTAAGGTATGTCTCCCGAATTTG 58.943 45.833 0.00 0.00 0.00 2.32
3728 4420 4.837093 AAGGTATGTCTCCCGAATTTGA 57.163 40.909 0.00 0.00 0.00 2.69
3729 4421 4.138487 AGGTATGTCTCCCGAATTTGAC 57.862 45.455 0.00 0.00 0.00 3.18
3730 4422 3.775316 AGGTATGTCTCCCGAATTTGACT 59.225 43.478 0.00 0.00 0.00 3.41
3731 4423 4.120589 GGTATGTCTCCCGAATTTGACTC 58.879 47.826 0.00 0.00 0.00 3.36
3732 4424 4.141914 GGTATGTCTCCCGAATTTGACTCT 60.142 45.833 0.00 0.00 0.00 3.24
3733 4425 4.559862 ATGTCTCCCGAATTTGACTCTT 57.440 40.909 0.00 0.00 0.00 2.85
3734 4426 4.351874 TGTCTCCCGAATTTGACTCTTT 57.648 40.909 0.00 0.00 0.00 2.52
3735 4427 4.714632 TGTCTCCCGAATTTGACTCTTTT 58.285 39.130 0.00 0.00 0.00 2.27
3736 4428 5.130350 TGTCTCCCGAATTTGACTCTTTTT 58.870 37.500 0.00 0.00 0.00 1.94
3756 4448 5.621197 TTTTATATGATTCGGCCGGATTG 57.379 39.130 27.83 0.00 0.00 2.67
3757 4449 1.453155 ATATGATTCGGCCGGATTGC 58.547 50.000 27.83 12.12 0.00 3.56
3758 4450 0.396435 TATGATTCGGCCGGATTGCT 59.604 50.000 27.83 13.15 0.00 3.91
3759 4451 1.168407 ATGATTCGGCCGGATTGCTG 61.168 55.000 27.83 0.00 39.04 4.41
3760 4452 2.516930 ATTCGGCCGGATTGCTGG 60.517 61.111 27.83 0.00 43.89 4.85
3761 4453 2.940890 GATTCGGCCGGATTGCTGGA 62.941 60.000 27.83 0.00 43.76 3.86
3762 4454 3.969250 TTCGGCCGGATTGCTGGAC 62.969 63.158 27.83 0.00 45.98 4.02
3764 4456 2.044946 GGCCGGATTGCTGGACTT 60.045 61.111 5.05 0.00 45.96 3.01
3765 4457 1.678970 GGCCGGATTGCTGGACTTT 60.679 57.895 5.05 0.00 45.96 2.66
3766 4458 1.508088 GCCGGATTGCTGGACTTTG 59.492 57.895 5.05 0.00 43.76 2.77
3767 4459 1.937546 GCCGGATTGCTGGACTTTGG 61.938 60.000 5.05 0.00 43.76 3.28
3768 4460 0.609131 CCGGATTGCTGGACTTTGGT 60.609 55.000 0.00 0.00 43.76 3.67
3769 4461 0.523072 CGGATTGCTGGACTTTGGTG 59.477 55.000 0.00 0.00 0.00 4.17
3770 4462 1.881925 CGGATTGCTGGACTTTGGTGA 60.882 52.381 0.00 0.00 0.00 4.02
3771 4463 2.238521 GGATTGCTGGACTTTGGTGAA 58.761 47.619 0.00 0.00 0.00 3.18
3772 4464 2.229784 GGATTGCTGGACTTTGGTGAAG 59.770 50.000 0.00 0.00 41.32 3.02
3773 4465 2.727123 TTGCTGGACTTTGGTGAAGA 57.273 45.000 0.00 0.00 38.77 2.87
3774 4466 2.260844 TGCTGGACTTTGGTGAAGAG 57.739 50.000 0.00 0.00 38.77 2.85
3775 4467 1.768275 TGCTGGACTTTGGTGAAGAGA 59.232 47.619 0.00 0.00 38.77 3.10
3776 4468 2.147150 GCTGGACTTTGGTGAAGAGAC 58.853 52.381 0.00 0.00 38.77 3.36
3777 4469 2.408050 CTGGACTTTGGTGAAGAGACG 58.592 52.381 0.00 0.00 38.77 4.18
3778 4470 2.035961 CTGGACTTTGGTGAAGAGACGA 59.964 50.000 0.00 0.00 38.77 4.20
3779 4471 2.432874 TGGACTTTGGTGAAGAGACGAA 59.567 45.455 0.00 0.00 38.77 3.85
3780 4472 3.118555 TGGACTTTGGTGAAGAGACGAAA 60.119 43.478 0.00 0.00 38.77 3.46
3781 4473 3.495001 GGACTTTGGTGAAGAGACGAAAG 59.505 47.826 0.00 0.00 43.49 2.62
3782 4474 4.369182 GACTTTGGTGAAGAGACGAAAGA 58.631 43.478 13.07 0.00 41.60 2.52
3783 4475 4.766375 ACTTTGGTGAAGAGACGAAAGAA 58.234 39.130 13.07 0.00 41.60 2.52
3784 4476 5.368989 ACTTTGGTGAAGAGACGAAAGAAT 58.631 37.500 13.07 0.00 41.60 2.40
3785 4477 5.237344 ACTTTGGTGAAGAGACGAAAGAATG 59.763 40.000 13.07 0.00 41.60 2.67
3786 4478 3.067106 TGGTGAAGAGACGAAAGAATGC 58.933 45.455 0.00 0.00 0.00 3.56
3787 4479 2.416893 GGTGAAGAGACGAAAGAATGCC 59.583 50.000 0.00 0.00 0.00 4.40
3788 4480 2.416893 GTGAAGAGACGAAAGAATGCCC 59.583 50.000 0.00 0.00 0.00 5.36
3789 4481 1.661112 GAAGAGACGAAAGAATGCCCG 59.339 52.381 0.00 0.00 0.00 6.13
3790 4482 0.741221 AGAGACGAAAGAATGCCCGC 60.741 55.000 0.00 0.00 0.00 6.13
3791 4483 1.706287 GAGACGAAAGAATGCCCGCC 61.706 60.000 0.00 0.00 0.00 6.13
3792 4484 3.095898 GACGAAAGAATGCCCGCCG 62.096 63.158 0.00 0.00 0.00 6.46
3793 4485 3.876198 CGAAAGAATGCCCGCCGG 61.876 66.667 0.00 0.00 0.00 6.13
3794 4486 2.437716 GAAAGAATGCCCGCCGGA 60.438 61.111 5.05 0.00 0.00 5.14
3795 4487 2.034999 AAAGAATGCCCGCCGGAA 59.965 55.556 5.05 0.00 0.00 4.30
3796 4488 1.591504 GAAAGAATGCCCGCCGGAAA 61.592 55.000 5.05 0.00 0.00 3.13
3797 4489 1.182385 AAAGAATGCCCGCCGGAAAA 61.182 50.000 5.05 0.00 0.00 2.29
3798 4490 1.595093 AAGAATGCCCGCCGGAAAAG 61.595 55.000 5.05 0.00 0.00 2.27
3799 4491 3.699955 GAATGCCCGCCGGAAAAGC 62.700 63.158 5.05 0.00 0.00 3.51
3800 4492 4.740822 ATGCCCGCCGGAAAAGCT 62.741 61.111 5.05 0.00 0.00 3.74
3803 4495 2.582436 CCCGCCGGAAAAGCTCTA 59.418 61.111 5.05 0.00 0.00 2.43
3804 4496 1.521681 CCCGCCGGAAAAGCTCTAG 60.522 63.158 5.05 0.00 0.00 2.43
3805 4497 1.515954 CCGCCGGAAAAGCTCTAGA 59.484 57.895 5.05 0.00 0.00 2.43
3806 4498 0.105039 CCGCCGGAAAAGCTCTAGAT 59.895 55.000 5.05 0.00 0.00 1.98
3807 4499 1.492720 CGCCGGAAAAGCTCTAGATC 58.507 55.000 5.05 0.00 0.00 2.75
3808 4500 1.492720 GCCGGAAAAGCTCTAGATCG 58.507 55.000 5.05 0.00 0.00 3.69
3809 4501 1.870167 GCCGGAAAAGCTCTAGATCGG 60.870 57.143 5.05 8.25 39.26 4.18
3810 4502 1.492720 CGGAAAAGCTCTAGATCGGC 58.507 55.000 0.00 0.00 0.00 5.54
3811 4503 1.492720 GGAAAAGCTCTAGATCGGCG 58.507 55.000 0.00 0.00 0.00 6.46
3812 4504 0.855995 GAAAAGCTCTAGATCGGCGC 59.144 55.000 0.00 0.00 0.00 6.53
3813 4505 0.530870 AAAAGCTCTAGATCGGCGCC 60.531 55.000 19.07 19.07 0.00 6.53
3814 4506 2.685387 AAAGCTCTAGATCGGCGCCG 62.685 60.000 42.13 42.13 41.35 6.46
3815 4507 4.708968 GCTCTAGATCGGCGCCGG 62.709 72.222 44.95 29.88 40.25 6.13
3816 4508 2.978565 CTCTAGATCGGCGCCGGA 60.979 66.667 44.95 32.12 40.25 5.14
3817 4509 2.282251 TCTAGATCGGCGCCGGAT 60.282 61.111 44.95 34.76 40.25 4.18
3818 4510 2.126307 CTAGATCGGCGCCGGATG 60.126 66.667 44.95 26.82 40.25 3.51
3819 4511 2.910479 TAGATCGGCGCCGGATGT 60.910 61.111 44.95 33.53 40.25 3.06
3820 4512 3.207547 TAGATCGGCGCCGGATGTG 62.208 63.158 44.95 19.83 40.25 3.21
3821 4513 4.585526 GATCGGCGCCGGATGTGA 62.586 66.667 44.95 27.79 40.25 3.58
3822 4514 4.891727 ATCGGCGCCGGATGTGAC 62.892 66.667 44.95 6.73 40.25 3.67
3857 4549 3.822192 CGGTCACGGCGATCCAGA 61.822 66.667 16.62 0.00 36.18 3.86
3858 4550 2.815308 GGTCACGGCGATCCAGAT 59.185 61.111 16.62 0.00 0.00 2.90
3859 4551 1.300233 GGTCACGGCGATCCAGATC 60.300 63.158 16.62 0.00 34.56 2.75
3889 4581 1.701704 GCCAGGAGCGTTTGAATTTG 58.298 50.000 0.00 0.00 0.00 2.32
3890 4582 1.701704 CCAGGAGCGTTTGAATTTGC 58.298 50.000 0.00 0.00 0.00 3.68
3891 4583 1.270550 CCAGGAGCGTTTGAATTTGCT 59.729 47.619 0.00 0.00 41.11 3.91
3894 4586 1.606606 GAGCGTTTGAATTTGCTCGG 58.393 50.000 0.00 0.00 43.67 4.63
3895 4587 0.387239 AGCGTTTGAATTTGCTCGGC 60.387 50.000 0.00 0.00 30.37 5.54
3896 4588 1.344226 GCGTTTGAATTTGCTCGGCC 61.344 55.000 0.00 0.00 0.00 6.13
3897 4589 1.065031 CGTTTGAATTTGCTCGGCCG 61.065 55.000 22.12 22.12 0.00 6.13
3898 4590 0.239879 GTTTGAATTTGCTCGGCCGA 59.760 50.000 29.03 29.03 0.00 5.54
3899 4591 0.521291 TTTGAATTTGCTCGGCCGAG 59.479 50.000 43.74 43.74 44.56 4.63
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
67 68 3.784511 AGAGAAGGATCCGGTATCGTA 57.215 47.619 5.98 0.00 35.21 3.43
91 92 5.971792 TCGATCGTGAAGATACTTGCTTTAG 59.028 40.000 15.94 0.00 40.26 1.85
117 118 3.565482 CAGCCAGCATGTATATTCGGTTT 59.435 43.478 0.00 0.00 0.00 3.27
177 181 1.762957 TGCTACCTGCTTCCAGATACC 59.237 52.381 0.00 0.00 41.77 2.73
193 197 2.238521 CAGGGTTGCCTTCTTTTGCTA 58.761 47.619 0.00 0.00 0.00 3.49
303 315 2.438614 CTGGAGACCCGAGCGAGA 60.439 66.667 0.00 0.00 34.29 4.04
383 403 0.321122 CAGTGGCTGTCCTGACCTTC 60.321 60.000 0.00 0.00 0.00 3.46
397 417 4.742201 CCCGGTCGTGCTCAGTGG 62.742 72.222 0.00 0.00 0.00 4.00
494 530 4.344865 GGCCAGGGCGGTGAAGAA 62.345 66.667 0.00 0.00 43.06 2.52
597 641 1.302033 CAAGAAGACGCAGGTGGCT 60.302 57.895 0.00 0.00 41.67 4.75
598 642 2.328099 CCAAGAAGACGCAGGTGGC 61.328 63.158 0.00 0.00 39.90 5.01
668 739 0.957362 GGATGCAATTGGGCTAGCTC 59.043 55.000 15.72 12.12 34.04 4.09
771 869 1.709147 ATGAATTGTCGAGCAGCGGC 61.709 55.000 0.00 0.00 46.88 6.53
772 870 0.302890 GATGAATTGTCGAGCAGCGG 59.697 55.000 0.00 0.00 41.33 5.52
773 871 1.284657 AGATGAATTGTCGAGCAGCG 58.715 50.000 0.00 0.00 42.69 5.18
784 882 3.007398 GGTCAGCTCCGGATAGATGAATT 59.993 47.826 12.66 0.00 43.05 2.17
786 884 1.964223 GGTCAGCTCCGGATAGATGAA 59.036 52.381 12.66 0.00 43.05 2.57
788 886 0.242286 CGGTCAGCTCCGGATAGATG 59.758 60.000 3.57 3.03 45.88 2.90
866 967 3.198489 GCTGAGCGCTAACCTGGC 61.198 66.667 11.50 0.00 35.14 4.85
946 1047 1.602377 GCACGCAAACCAAGAACTAGT 59.398 47.619 0.00 0.00 0.00 2.57
947 1048 1.398451 CGCACGCAAACCAAGAACTAG 60.398 52.381 0.00 0.00 0.00 2.57
1074 1175 2.591429 CACCAGCAACAGACCGCA 60.591 61.111 0.00 0.00 0.00 5.69
1152 1253 2.038033 TGCTGGTGTCAGTTACTTACCC 59.962 50.000 7.46 3.54 42.78 3.69
1180 1287 2.808958 GAAGCGGCGCGAATTGCTA 61.809 57.895 27.59 0.00 43.27 3.49
1181 1288 4.166011 GAAGCGGCGCGAATTGCT 62.166 61.111 27.59 9.91 43.27 3.91
1184 1291 2.709475 GATGAAGCGGCGCGAATT 59.291 55.556 27.59 15.96 0.00 2.17
1193 1300 0.179156 AAATTGCAGCGGATGAAGCG 60.179 50.000 0.00 0.00 40.04 4.68
1212 1334 2.034812 AGTTACGGGAAAATGCGCAAAA 59.965 40.909 17.11 0.00 0.00 2.44
1213 1335 1.609555 AGTTACGGGAAAATGCGCAAA 59.390 42.857 17.11 0.00 0.00 3.68
1215 1337 2.096220 TAGTTACGGGAAAATGCGCA 57.904 45.000 14.96 14.96 0.00 6.09
1216 1338 2.777494 GTTAGTTACGGGAAAATGCGC 58.223 47.619 0.00 0.00 0.00 6.09
1217 1339 3.029167 CGTTAGTTACGGGAAAATGCG 57.971 47.619 0.00 0.00 46.42 4.73
1228 1350 7.587392 GGACCAAACATACAAAACGTTAGTTAC 59.413 37.037 0.00 0.00 40.18 2.50
1229 1351 7.255070 GGGACCAAACATACAAAACGTTAGTTA 60.255 37.037 0.00 0.00 40.18 2.24
1230 1352 6.459985 GGGACCAAACATACAAAACGTTAGTT 60.460 38.462 0.00 0.00 43.50 2.24
1231 1353 5.008911 GGGACCAAACATACAAAACGTTAGT 59.991 40.000 0.00 6.37 0.00 2.24
1232 1354 5.008811 TGGGACCAAACATACAAAACGTTAG 59.991 40.000 0.00 0.00 0.00 2.34
1233 1355 4.885907 TGGGACCAAACATACAAAACGTTA 59.114 37.500 0.00 0.00 0.00 3.18
1234 1356 3.700038 TGGGACCAAACATACAAAACGTT 59.300 39.130 0.00 0.00 0.00 3.99
1391 1514 0.107165 GGAGGCCCATGTACACCTTC 60.107 60.000 0.00 0.00 30.95 3.46
1397 1520 1.147153 GAGCAGGAGGCCCATGTAC 59.853 63.158 0.00 0.00 46.50 2.90
1484 1607 6.536582 GCTAGCAGAGATTTCAGATGTTTGTA 59.463 38.462 10.63 0.00 0.00 2.41
1486 1609 5.585445 AGCTAGCAGAGATTTCAGATGTTTG 59.415 40.000 18.83 0.00 0.00 2.93
1489 1612 4.405036 TGAGCTAGCAGAGATTTCAGATGT 59.595 41.667 18.83 0.00 0.00 3.06
1496 1619 3.118445 GGTTCCTGAGCTAGCAGAGATTT 60.118 47.826 18.83 0.00 38.14 2.17
1499 1622 1.272704 TGGTTCCTGAGCTAGCAGAGA 60.273 52.381 18.83 5.06 38.14 3.10
1508 1631 1.677217 GGATGTCACTGGTTCCTGAGC 60.677 57.143 2.86 0.00 0.00 4.26
1509 1632 1.065854 GGGATGTCACTGGTTCCTGAG 60.066 57.143 2.86 0.00 0.00 3.35
1513 1636 3.558674 CAGGGATGTCACTGGTTCC 57.441 57.895 4.32 0.00 43.48 3.62
1519 1642 1.637553 AGGAAATGCAGGGATGTCACT 59.362 47.619 0.00 0.00 0.00 3.41
1526 1651 3.010472 TGAGAAATGAGGAAATGCAGGGA 59.990 43.478 0.00 0.00 0.00 4.20
1528 1653 5.593679 AATGAGAAATGAGGAAATGCAGG 57.406 39.130 0.00 0.00 0.00 4.85
1542 1667 9.801873 CCAGTTTTTCAGAAACTAAATGAGAAA 57.198 29.630 8.64 0.00 38.32 2.52
1581 1706 6.159988 AGAGTTCAATTACTTCCTTGTCGAG 58.840 40.000 0.00 0.00 0.00 4.04
1600 1725 5.182760 CGTGTAAGGGTGTAAGTAGAGAGTT 59.817 44.000 0.00 0.00 0.00 3.01
1601 1726 4.699257 CGTGTAAGGGTGTAAGTAGAGAGT 59.301 45.833 0.00 0.00 0.00 3.24
1606 1731 4.436584 CGTCTCGTGTAAGGGTGTAAGTAG 60.437 50.000 0.00 0.00 0.00 2.57
1614 1739 1.580845 CCGTCGTCTCGTGTAAGGGT 61.581 60.000 0.00 0.00 0.00 4.34
1615 1740 1.136147 CCGTCGTCTCGTGTAAGGG 59.864 63.158 0.00 0.00 0.00 3.95
1616 1741 0.239347 AACCGTCGTCTCGTGTAAGG 59.761 55.000 0.00 0.00 0.00 2.69
1622 1747 0.594602 TTCATGAACCGTCGTCTCGT 59.405 50.000 3.38 0.00 0.00 4.18
1628 1753 3.061295 CAGAGACAATTCATGAACCGTCG 59.939 47.826 23.37 12.47 32.89 5.12
1629 1754 3.997021 ACAGAGACAATTCATGAACCGTC 59.003 43.478 22.72 22.72 0.00 4.79
1630 1755 4.008074 ACAGAGACAATTCATGAACCGT 57.992 40.909 11.07 10.76 0.00 4.83
1633 1758 7.386299 AGTCAAGTACAGAGACAATTCATGAAC 59.614 37.037 11.07 0.00 34.80 3.18
1634 1759 7.386025 CAGTCAAGTACAGAGACAATTCATGAA 59.614 37.037 11.26 11.26 34.80 2.57
1635 1760 6.870439 CAGTCAAGTACAGAGACAATTCATGA 59.130 38.462 12.77 0.00 34.80 3.07
1636 1761 6.870439 TCAGTCAAGTACAGAGACAATTCATG 59.130 38.462 12.77 0.00 34.80 3.07
1640 1765 7.116948 CGAATTCAGTCAAGTACAGAGACAATT 59.883 37.037 6.22 10.58 34.80 2.32
1644 1769 4.324936 GCGAATTCAGTCAAGTACAGAGAC 59.675 45.833 6.22 0.00 0.00 3.36
1645 1770 4.486090 GCGAATTCAGTCAAGTACAGAGA 58.514 43.478 6.22 0.00 0.00 3.10
1646 1771 3.614616 GGCGAATTCAGTCAAGTACAGAG 59.385 47.826 6.22 0.00 0.00 3.35
1647 1772 3.258372 AGGCGAATTCAGTCAAGTACAGA 59.742 43.478 6.22 0.00 0.00 3.41
1648 1773 3.589988 AGGCGAATTCAGTCAAGTACAG 58.410 45.455 6.22 0.00 0.00 2.74
1649 1774 3.258372 AGAGGCGAATTCAGTCAAGTACA 59.742 43.478 6.22 0.00 0.00 2.90
1650 1775 3.851098 AGAGGCGAATTCAGTCAAGTAC 58.149 45.455 6.22 0.00 0.00 2.73
1651 1776 3.509967 TGAGAGGCGAATTCAGTCAAGTA 59.490 43.478 6.22 0.00 0.00 2.24
1652 1777 2.300152 TGAGAGGCGAATTCAGTCAAGT 59.700 45.455 6.22 0.00 0.00 3.16
1673 1798 1.432807 ACAATGAAACCCCCATGAGGT 59.567 47.619 0.00 0.00 40.14 3.85
1675 1800 1.205417 GCACAATGAAACCCCCATGAG 59.795 52.381 0.00 0.00 0.00 2.90
1684 1809 2.668279 CGCCTTACCTGCACAATGAAAC 60.668 50.000 0.00 0.00 0.00 2.78
1685 1810 1.539388 CGCCTTACCTGCACAATGAAA 59.461 47.619 0.00 0.00 0.00 2.69
1686 1811 1.164411 CGCCTTACCTGCACAATGAA 58.836 50.000 0.00 0.00 0.00 2.57
1687 1812 0.676466 CCGCCTTACCTGCACAATGA 60.676 55.000 0.00 0.00 0.00 2.57
1688 1813 1.802636 CCGCCTTACCTGCACAATG 59.197 57.895 0.00 0.00 0.00 2.82
1689 1814 2.046285 GCCGCCTTACCTGCACAAT 61.046 57.895 0.00 0.00 0.00 2.71
1690 1815 2.671619 GCCGCCTTACCTGCACAA 60.672 61.111 0.00 0.00 0.00 3.33
1700 1837 3.077556 ATCTCCGACTGCCGCCTT 61.078 61.111 0.00 0.00 36.84 4.35
1896 2035 1.396648 TGGTAAATTGATGCAGCGTCG 59.603 47.619 10.12 0.00 0.00 5.12
1900 2039 4.319766 CGGTATCTGGTAAATTGATGCAGC 60.320 45.833 0.00 0.00 0.00 5.25
1903 2042 3.058224 GCCGGTATCTGGTAAATTGATGC 60.058 47.826 1.90 0.00 0.00 3.91
1982 2121 1.353358 GGGTTACCAGTACCTTTGGCT 59.647 52.381 2.98 0.00 39.39 4.75
1997 2136 6.943146 TGCATTGTGTAATAAGTTCTGGGTTA 59.057 34.615 0.00 0.00 0.00 2.85
2001 2140 6.072508 ACAGTGCATTGTGTAATAAGTTCTGG 60.073 38.462 14.74 0.00 0.00 3.86
2303 2635 1.127582 GAGTTGACGCAGCAGACATTC 59.872 52.381 0.00 0.00 0.00 2.67
2304 2636 1.151668 GAGTTGACGCAGCAGACATT 58.848 50.000 0.00 0.00 0.00 2.71
2322 2655 2.625314 CAGATGGTCAGATAAGAGCGGA 59.375 50.000 0.00 0.00 38.81 5.54
2335 2668 0.108992 TGCGTAACGGTCAGATGGTC 60.109 55.000 0.00 0.00 0.00 4.02
2336 2669 0.535335 ATGCGTAACGGTCAGATGGT 59.465 50.000 0.00 0.00 0.00 3.55
2337 2670 0.930310 CATGCGTAACGGTCAGATGG 59.070 55.000 0.00 0.00 0.00 3.51
2338 2671 0.301687 GCATGCGTAACGGTCAGATG 59.698 55.000 0.00 0.00 0.00 2.90
2339 2672 1.145759 CGCATGCGTAACGGTCAGAT 61.146 55.000 31.33 0.00 34.35 2.90
2340 2673 1.803922 CGCATGCGTAACGGTCAGA 60.804 57.895 31.33 0.00 34.35 3.27
2341 2674 2.695055 CGCATGCGTAACGGTCAG 59.305 61.111 31.33 0.00 34.35 3.51
2453 2786 1.172180 CCGGAGAAACCAAGCTTGCA 61.172 55.000 21.43 0.00 38.90 4.08
2456 2789 2.224769 TGATTCCGGAGAAACCAAGCTT 60.225 45.455 3.34 0.00 38.90 3.74
2484 2817 2.918712 ATTACCCAATGAGCGAGAGG 57.081 50.000 0.00 0.00 0.00 3.69
2584 2928 7.945033 TTTTGGATGAAACTTCAACTAATGC 57.055 32.000 0.00 0.00 41.13 3.56
2626 2970 9.998106 AGGAAACTAGCGTCAATATAATGTAAT 57.002 29.630 0.00 0.00 40.61 1.89
2627 2971 9.256477 CAGGAAACTAGCGTCAATATAATGTAA 57.744 33.333 0.00 0.00 40.21 2.41
2644 2988 2.224744 TGCCACATTCAGCAGGAAACTA 60.225 45.455 0.00 0.00 40.21 2.24
2663 3007 2.125753 CCTGACGACTCCAGCTGC 60.126 66.667 8.66 0.00 0.00 5.25
2678 3022 4.361971 TCCGCCACCTCGTCTCCT 62.362 66.667 0.00 0.00 0.00 3.69
2723 3067 1.343884 ACTAGCTCCTTCATGCCCTCT 60.344 52.381 0.00 0.00 0.00 3.69
2741 3085 1.376424 CTGCATTGTCAGCCCGACT 60.376 57.895 5.56 0.00 45.60 4.18
2744 3088 2.872557 CACTGCATTGTCAGCCCG 59.127 61.111 0.00 0.00 37.59 6.13
2747 3091 3.677527 AGGCACTGCATTGTCAGC 58.322 55.556 11.51 0.00 37.18 4.26
2940 3286 1.189884 CAGCCGCGAAACACAAAAATG 59.810 47.619 8.23 0.00 0.00 2.32
3011 3357 3.265791 GTCTTCATTTCCAGCTCGATGT 58.734 45.455 0.00 0.00 0.00 3.06
3035 3381 2.520982 CTCCCCTCCGTCGCCATA 60.521 66.667 0.00 0.00 0.00 2.74
3053 3405 2.222027 CCATATCCTTCAAACCTCGGC 58.778 52.381 0.00 0.00 0.00 5.54
3054 3406 2.172717 ACCCATATCCTTCAAACCTCGG 59.827 50.000 0.00 0.00 0.00 4.63
3060 3412 2.652348 ACCCACACCCATATCCTTCAAA 59.348 45.455 0.00 0.00 0.00 2.69
3097 3449 4.949856 TCATTCCCCATTTTCTTAGCACTC 59.050 41.667 0.00 0.00 0.00 3.51
3098 3450 4.934356 TCATTCCCCATTTTCTTAGCACT 58.066 39.130 0.00 0.00 0.00 4.40
3106 3458 5.302823 CCTCTAACCATCATTCCCCATTTTC 59.697 44.000 0.00 0.00 0.00 2.29
3111 3463 2.135189 CCCTCTAACCATCATTCCCCA 58.865 52.381 0.00 0.00 0.00 4.96
3118 3470 2.899900 CCGATCATCCCTCTAACCATCA 59.100 50.000 0.00 0.00 0.00 3.07
3170 3522 1.993948 GTCCCGCCCCTCCTTAACT 60.994 63.158 0.00 0.00 0.00 2.24
3201 3555 3.302344 CCAAACCCCTGCAACCGG 61.302 66.667 0.00 0.00 0.00 5.28
3205 3559 0.178921 TATTGGCCAAACCCCTGCAA 60.179 50.000 24.71 0.00 37.83 4.08
3208 3562 1.686115 CCTCTATTGGCCAAACCCCTG 60.686 57.143 24.71 10.56 37.83 4.45
3237 3606 2.034558 CGACAACAGCTTCCATGGTTTT 59.965 45.455 12.58 0.00 0.00 2.43
3238 3607 1.608590 CGACAACAGCTTCCATGGTTT 59.391 47.619 12.58 0.00 0.00 3.27
3242 3611 1.236616 TGCCGACAACAGCTTCCATG 61.237 55.000 0.00 0.00 0.00 3.66
3251 3620 1.602323 GTCCCCATTGCCGACAACA 60.602 57.895 0.00 0.00 38.99 3.33
3258 3627 2.440247 CCCTTCGTCCCCATTGCC 60.440 66.667 0.00 0.00 0.00 4.52
3302 3671 1.474077 GGCTAAATGTCAGTTGCCTGG 59.526 52.381 14.97 0.00 39.31 4.45
3313 3682 3.161866 ACAAAATGGACCGGCTAAATGT 58.838 40.909 0.00 0.00 0.00 2.71
3352 3721 4.275936 AGAATGTACACAACCAGTTGCTTC 59.724 41.667 10.39 0.00 44.03 3.86
3376 3774 6.072064 CCTCCCGACTTTTGTATCGAGTATAT 60.072 42.308 0.00 0.00 40.86 0.86
3383 3781 2.667473 ACCTCCCGACTTTTGTATCG 57.333 50.000 0.00 0.00 38.08 2.92
3384 3782 5.667466 TCATTACCTCCCGACTTTTGTATC 58.333 41.667 0.00 0.00 0.00 2.24
3388 3786 4.324267 ACTTCATTACCTCCCGACTTTTG 58.676 43.478 0.00 0.00 0.00 2.44
3435 4127 3.307059 CGAGTCCATGGAAGAGGAACTTT 60.307 47.826 18.20 0.00 41.55 2.66
3469 4161 0.096976 CAGTATGTTTCAAGCCGCGG 59.903 55.000 24.05 24.05 0.00 6.46
3488 4180 3.005578 CAGGCCCGGAGACTTTATAGTAC 59.994 52.174 0.73 0.00 33.84 2.73
3490 4182 2.040178 CAGGCCCGGAGACTTTATAGT 58.960 52.381 0.73 0.00 37.31 2.12
3491 4183 2.317040 TCAGGCCCGGAGACTTTATAG 58.683 52.381 0.73 0.00 0.00 1.31
3492 4184 2.464796 TCAGGCCCGGAGACTTTATA 57.535 50.000 0.73 0.00 0.00 0.98
3493 4185 1.580059 TTCAGGCCCGGAGACTTTAT 58.420 50.000 0.73 0.00 0.00 1.40
3494 4186 1.580059 ATTCAGGCCCGGAGACTTTA 58.420 50.000 0.73 0.00 0.00 1.85
3495 4187 0.698818 AATTCAGGCCCGGAGACTTT 59.301 50.000 0.73 0.00 0.00 2.66
3504 4196 1.111715 GCTCCATGGAATTCAGGCCC 61.112 60.000 17.00 0.00 0.00 5.80
3508 4200 1.779025 CGCCGCTCCATGGAATTCAG 61.779 60.000 17.00 4.62 0.00 3.02
3537 4229 4.915110 TCGTCTTCGTCGTATCCAACGC 62.915 54.545 0.00 0.00 42.61 4.84
3538 4230 1.201954 TCGTCTTCGTCGTATCCAACG 60.202 52.381 0.00 0.00 43.48 4.10
3539 4231 2.438583 CTCGTCTTCGTCGTATCCAAC 58.561 52.381 0.00 0.00 38.33 3.77
3540 4232 1.399440 CCTCGTCTTCGTCGTATCCAA 59.601 52.381 0.00 0.00 38.33 3.53
3541 4233 1.012086 CCTCGTCTTCGTCGTATCCA 58.988 55.000 0.00 0.00 38.33 3.41
3542 4234 1.012841 ACCTCGTCTTCGTCGTATCC 58.987 55.000 0.00 0.00 38.33 2.59
3543 4235 2.438583 CAACCTCGTCTTCGTCGTATC 58.561 52.381 0.00 0.00 38.33 2.24
3544 4236 1.467035 GCAACCTCGTCTTCGTCGTAT 60.467 52.381 0.00 0.00 38.33 3.06
3545 4237 0.110056 GCAACCTCGTCTTCGTCGTA 60.110 55.000 0.00 0.00 38.33 3.43
3546 4238 1.371389 GCAACCTCGTCTTCGTCGT 60.371 57.895 0.00 0.00 38.33 4.34
3547 4239 0.663568 AAGCAACCTCGTCTTCGTCG 60.664 55.000 0.00 0.00 38.33 5.12
3548 4240 1.061485 GAAGCAACCTCGTCTTCGTC 58.939 55.000 0.00 0.00 38.33 4.20
3549 4241 0.387929 TGAAGCAACCTCGTCTTCGT 59.612 50.000 0.00 0.00 39.12 3.85
3550 4242 1.192534 GTTGAAGCAACCTCGTCTTCG 59.807 52.381 0.00 0.00 38.30 3.79
3551 4243 2.951676 GTTGAAGCAACCTCGTCTTC 57.048 50.000 0.00 0.00 38.30 2.87
3560 4252 2.096819 TCTTGTCAACGGTTGAAGCAAC 59.903 45.455 23.93 12.92 42.15 4.17
3561 4253 2.360844 TCTTGTCAACGGTTGAAGCAA 58.639 42.857 23.93 21.31 42.15 3.91
3562 4254 2.031258 TCTTGTCAACGGTTGAAGCA 57.969 45.000 23.93 16.07 42.15 3.91
3563 4255 2.095718 GGATCTTGTCAACGGTTGAAGC 60.096 50.000 23.93 13.75 42.15 3.86
3564 4256 3.403038 AGGATCTTGTCAACGGTTGAAG 58.597 45.455 23.93 18.32 42.15 3.02
3565 4257 3.485463 AGGATCTTGTCAACGGTTGAA 57.515 42.857 23.93 10.05 42.15 2.69
3566 4258 3.399330 GAAGGATCTTGTCAACGGTTGA 58.601 45.455 19.07 19.07 37.33 3.18
3567 4259 2.484264 GGAAGGATCTTGTCAACGGTTG 59.516 50.000 14.62 14.62 0.00 3.77
3568 4260 2.552373 GGGAAGGATCTTGTCAACGGTT 60.552 50.000 0.00 0.00 0.00 4.44
3569 4261 1.003233 GGGAAGGATCTTGTCAACGGT 59.997 52.381 0.00 0.00 0.00 4.83
3570 4262 1.739067 GGGAAGGATCTTGTCAACGG 58.261 55.000 0.00 0.00 0.00 4.44
3571 4263 1.337823 ACGGGAAGGATCTTGTCAACG 60.338 52.381 0.00 0.00 0.00 4.10
3572 4264 2.347731 GACGGGAAGGATCTTGTCAAC 58.652 52.381 0.00 0.00 33.07 3.18
3573 4265 1.067142 CGACGGGAAGGATCTTGTCAA 60.067 52.381 0.00 0.00 32.66 3.18
3574 4266 0.530744 CGACGGGAAGGATCTTGTCA 59.469 55.000 0.00 0.00 32.66 3.58
3575 4267 0.815734 TCGACGGGAAGGATCTTGTC 59.184 55.000 0.00 0.00 0.00 3.18
3576 4268 1.137086 CATCGACGGGAAGGATCTTGT 59.863 52.381 0.00 0.00 0.00 3.16
3577 4269 1.409064 TCATCGACGGGAAGGATCTTG 59.591 52.381 0.00 0.00 0.00 3.02
3578 4270 1.776662 TCATCGACGGGAAGGATCTT 58.223 50.000 0.00 0.00 0.00 2.40
3579 4271 1.889829 GATCATCGACGGGAAGGATCT 59.110 52.381 0.00 0.00 36.95 2.75
3580 4272 1.067495 GGATCATCGACGGGAAGGATC 60.067 57.143 0.00 0.00 38.14 3.36
3581 4273 0.969894 GGATCATCGACGGGAAGGAT 59.030 55.000 0.00 0.00 0.00 3.24
3582 4274 0.396556 TGGATCATCGACGGGAAGGA 60.397 55.000 0.00 0.00 0.00 3.36
3583 4275 0.032678 CTGGATCATCGACGGGAAGG 59.967 60.000 0.00 0.00 0.00 3.46
3584 4276 0.598680 GCTGGATCATCGACGGGAAG 60.599 60.000 0.00 0.00 0.00 3.46
3585 4277 1.441729 GCTGGATCATCGACGGGAA 59.558 57.895 0.00 0.00 0.00 3.97
3586 4278 2.845550 CGCTGGATCATCGACGGGA 61.846 63.158 0.00 0.00 0.00 5.14
3587 4279 2.355126 CGCTGGATCATCGACGGG 60.355 66.667 0.00 0.00 0.00 5.28
3588 4280 1.371022 CTCGCTGGATCATCGACGG 60.371 63.158 0.00 0.00 29.19 4.79
3589 4281 0.385348 CTCTCGCTGGATCATCGACG 60.385 60.000 0.00 0.00 29.19 5.12
3590 4282 0.665835 ACTCTCGCTGGATCATCGAC 59.334 55.000 0.00 0.00 29.19 4.20
3591 4283 0.947960 GACTCTCGCTGGATCATCGA 59.052 55.000 0.00 0.00 31.37 3.59
3592 4284 0.385348 CGACTCTCGCTGGATCATCG 60.385 60.000 0.00 0.00 31.14 3.84
3593 4285 0.039617 CCGACTCTCGCTGGATCATC 60.040 60.000 0.00 0.00 38.82 2.92
3594 4286 1.459455 CCCGACTCTCGCTGGATCAT 61.459 60.000 0.00 0.00 38.82 2.45
3595 4287 2.121538 CCCGACTCTCGCTGGATCA 61.122 63.158 0.00 0.00 38.82 2.92
3596 4288 2.725008 CCCGACTCTCGCTGGATC 59.275 66.667 0.00 0.00 38.82 3.36
3597 4289 3.532155 GCCCGACTCTCGCTGGAT 61.532 66.667 0.00 0.00 38.82 3.41
3598 4290 4.742649 AGCCCGACTCTCGCTGGA 62.743 66.667 0.00 0.00 38.82 3.86
3599 4291 3.708220 GAAGCCCGACTCTCGCTGG 62.708 68.421 0.00 0.00 38.82 4.85
3600 4292 2.202676 GAAGCCCGACTCTCGCTG 60.203 66.667 0.00 0.00 38.82 5.18
3601 4293 2.055042 ATGAAGCCCGACTCTCGCT 61.055 57.895 0.00 0.00 38.82 4.93
3602 4294 1.880340 CATGAAGCCCGACTCTCGC 60.880 63.158 0.00 0.00 38.82 5.03
3603 4295 1.880340 GCATGAAGCCCGACTCTCG 60.880 63.158 0.00 0.00 40.07 4.04
3604 4296 1.880340 CGCATGAAGCCCGACTCTC 60.880 63.158 0.00 0.00 41.38 3.20
3605 4297 2.185350 CGCATGAAGCCCGACTCT 59.815 61.111 0.00 0.00 41.38 3.24
3606 4298 2.892425 CCGCATGAAGCCCGACTC 60.892 66.667 0.00 0.00 41.38 3.36
3607 4299 4.473520 CCCGCATGAAGCCCGACT 62.474 66.667 0.00 0.00 41.38 4.18
3611 4303 4.883354 CTCCCCCGCATGAAGCCC 62.883 72.222 0.00 0.00 41.38 5.19
3612 4304 3.797353 TCTCCCCCGCATGAAGCC 61.797 66.667 0.00 0.00 41.38 4.35
3613 4305 1.686325 TAGTCTCCCCCGCATGAAGC 61.686 60.000 0.00 0.00 40.87 3.86
3614 4306 1.051812 ATAGTCTCCCCCGCATGAAG 58.948 55.000 0.00 0.00 0.00 3.02
3615 4307 0.758734 CATAGTCTCCCCCGCATGAA 59.241 55.000 0.00 0.00 0.00 2.57
3616 4308 1.121407 CCATAGTCTCCCCCGCATGA 61.121 60.000 0.00 0.00 0.00 3.07
3617 4309 1.121407 TCCATAGTCTCCCCCGCATG 61.121 60.000 0.00 0.00 0.00 4.06
3618 4310 0.833834 CTCCATAGTCTCCCCCGCAT 60.834 60.000 0.00 0.00 0.00 4.73
3619 4311 1.457643 CTCCATAGTCTCCCCCGCA 60.458 63.158 0.00 0.00 0.00 5.69
3620 4312 0.543174 ATCTCCATAGTCTCCCCCGC 60.543 60.000 0.00 0.00 0.00 6.13
3621 4313 1.261480 CATCTCCATAGTCTCCCCCG 58.739 60.000 0.00 0.00 0.00 5.73
3622 4314 2.370189 CAACATCTCCATAGTCTCCCCC 59.630 54.545 0.00 0.00 0.00 5.40
3623 4315 2.224402 GCAACATCTCCATAGTCTCCCC 60.224 54.545 0.00 0.00 0.00 4.81
3624 4316 2.435805 TGCAACATCTCCATAGTCTCCC 59.564 50.000 0.00 0.00 0.00 4.30
3625 4317 3.726607 CTGCAACATCTCCATAGTCTCC 58.273 50.000 0.00 0.00 0.00 3.71
3626 4318 3.129871 GCTGCAACATCTCCATAGTCTC 58.870 50.000 0.00 0.00 0.00 3.36
3627 4319 2.482664 CGCTGCAACATCTCCATAGTCT 60.483 50.000 0.00 0.00 0.00 3.24
3628 4320 1.863454 CGCTGCAACATCTCCATAGTC 59.137 52.381 0.00 0.00 0.00 2.59
3629 4321 1.473965 CCGCTGCAACATCTCCATAGT 60.474 52.381 0.00 0.00 0.00 2.12
3630 4322 1.224075 CCGCTGCAACATCTCCATAG 58.776 55.000 0.00 0.00 0.00 2.23
3631 4323 0.179048 CCCGCTGCAACATCTCCATA 60.179 55.000 0.00 0.00 0.00 2.74
3632 4324 1.452651 CCCGCTGCAACATCTCCAT 60.453 57.895 0.00 0.00 0.00 3.41
3633 4325 1.549243 TACCCGCTGCAACATCTCCA 61.549 55.000 0.00 0.00 0.00 3.86
3634 4326 0.811616 CTACCCGCTGCAACATCTCC 60.812 60.000 0.00 0.00 0.00 3.71
3635 4327 0.108138 ACTACCCGCTGCAACATCTC 60.108 55.000 0.00 0.00 0.00 2.75
3636 4328 0.324943 AACTACCCGCTGCAACATCT 59.675 50.000 0.00 0.00 0.00 2.90
3637 4329 0.727398 GAACTACCCGCTGCAACATC 59.273 55.000 0.00 0.00 0.00 3.06
3638 4330 0.036164 TGAACTACCCGCTGCAACAT 59.964 50.000 0.00 0.00 0.00 2.71
3639 4331 0.882927 GTGAACTACCCGCTGCAACA 60.883 55.000 0.00 0.00 0.00 3.33
3640 4332 1.574702 GGTGAACTACCCGCTGCAAC 61.575 60.000 0.00 0.00 44.15 4.17
3641 4333 1.302192 GGTGAACTACCCGCTGCAA 60.302 57.895 0.00 0.00 44.15 4.08
3642 4334 2.345991 GGTGAACTACCCGCTGCA 59.654 61.111 0.00 0.00 44.15 4.41
3649 4341 2.090524 CGTTCGCCGGTGAACTACC 61.091 63.158 41.99 25.97 44.76 3.18
3650 4342 3.455685 CGTTCGCCGGTGAACTAC 58.544 61.111 41.99 27.26 44.76 2.73
3687 4379 2.353610 GGCAATGCACCCTTCCAGG 61.354 63.158 7.79 0.00 34.30 4.45
3688 4380 0.034186 TAGGCAATGCACCCTTCCAG 60.034 55.000 7.79 0.00 32.65 3.86
3689 4381 0.407528 TTAGGCAATGCACCCTTCCA 59.592 50.000 7.79 0.00 32.65 3.53
3690 4382 1.106285 CTTAGGCAATGCACCCTTCC 58.894 55.000 7.79 0.00 32.65 3.46
3691 4383 1.106285 CCTTAGGCAATGCACCCTTC 58.894 55.000 7.79 0.00 32.65 3.46
3692 4384 0.409484 ACCTTAGGCAATGCACCCTT 59.591 50.000 7.79 0.00 32.65 3.95
3693 4385 1.295020 TACCTTAGGCAATGCACCCT 58.705 50.000 7.79 7.47 35.22 4.34
3694 4386 1.956477 CATACCTTAGGCAATGCACCC 59.044 52.381 7.79 0.00 0.00 4.61
3695 4387 2.618709 GACATACCTTAGGCAATGCACC 59.381 50.000 7.79 0.00 0.00 5.01
3696 4388 3.545703 AGACATACCTTAGGCAATGCAC 58.454 45.455 7.79 8.27 0.00 4.57
3697 4389 3.433598 GGAGACATACCTTAGGCAATGCA 60.434 47.826 7.79 0.00 0.00 3.96
3698 4390 3.142174 GGAGACATACCTTAGGCAATGC 58.858 50.000 12.43 0.00 0.00 3.56
3699 4391 3.744660 GGGAGACATACCTTAGGCAATG 58.255 50.000 11.30 11.30 0.00 2.82
3700 4392 2.368875 CGGGAGACATACCTTAGGCAAT 59.631 50.000 0.00 0.00 0.00 3.56
3701 4393 1.760613 CGGGAGACATACCTTAGGCAA 59.239 52.381 0.00 0.00 0.00 4.52
3702 4394 1.063492 TCGGGAGACATACCTTAGGCA 60.063 52.381 0.00 0.00 0.00 4.75
3703 4395 1.700955 TCGGGAGACATACCTTAGGC 58.299 55.000 0.00 0.00 0.00 3.93
3704 4396 4.957684 AATTCGGGAGACATACCTTAGG 57.042 45.455 0.00 0.00 39.59 2.69
3705 4397 5.753921 GTCAAATTCGGGAGACATACCTTAG 59.246 44.000 0.00 0.00 39.59 2.18
3706 4398 5.424252 AGTCAAATTCGGGAGACATACCTTA 59.576 40.000 0.00 0.00 39.59 2.69
3707 4399 4.225267 AGTCAAATTCGGGAGACATACCTT 59.775 41.667 0.00 0.00 39.59 3.50
3708 4400 3.775316 AGTCAAATTCGGGAGACATACCT 59.225 43.478 0.00 0.00 39.59 3.08
3709 4401 4.120589 GAGTCAAATTCGGGAGACATACC 58.879 47.826 0.00 0.00 39.59 2.73
3710 4402 5.012328 AGAGTCAAATTCGGGAGACATAC 57.988 43.478 0.00 0.00 39.59 2.39
3711 4403 5.677319 AAGAGTCAAATTCGGGAGACATA 57.323 39.130 0.00 0.00 39.59 2.29
3712 4404 4.559862 AAGAGTCAAATTCGGGAGACAT 57.440 40.909 0.00 0.00 39.59 3.06
3713 4405 4.351874 AAAGAGTCAAATTCGGGAGACA 57.648 40.909 0.00 0.00 39.59 3.41
3714 4406 5.690997 AAAAAGAGTCAAATTCGGGAGAC 57.309 39.130 0.00 0.00 39.59 3.36
3733 4425 5.563867 GCAATCCGGCCGAATCATATAAAAA 60.564 40.000 30.73 0.00 0.00 1.94
3734 4426 4.083003 GCAATCCGGCCGAATCATATAAAA 60.083 41.667 30.73 0.00 0.00 1.52
3735 4427 3.438781 GCAATCCGGCCGAATCATATAAA 59.561 43.478 30.73 0.00 0.00 1.40
3736 4428 3.006940 GCAATCCGGCCGAATCATATAA 58.993 45.455 30.73 0.00 0.00 0.98
3737 4429 2.236146 AGCAATCCGGCCGAATCATATA 59.764 45.455 30.73 1.02 0.00 0.86
3738 4430 1.003580 AGCAATCCGGCCGAATCATAT 59.996 47.619 30.73 6.98 0.00 1.78
3739 4431 0.396435 AGCAATCCGGCCGAATCATA 59.604 50.000 30.73 4.60 0.00 2.15
3740 4432 1.149174 AGCAATCCGGCCGAATCAT 59.851 52.632 30.73 10.02 0.00 2.45
3741 4433 1.819208 CAGCAATCCGGCCGAATCA 60.819 57.895 30.73 7.73 0.00 2.57
3742 4434 2.546494 CCAGCAATCCGGCCGAATC 61.546 63.158 30.73 10.73 0.00 2.52
3743 4435 2.516930 CCAGCAATCCGGCCGAAT 60.517 61.111 30.73 9.95 0.00 3.34
3744 4436 3.711814 TCCAGCAATCCGGCCGAA 61.712 61.111 30.73 6.63 0.00 4.30
3745 4437 4.467084 GTCCAGCAATCCGGCCGA 62.467 66.667 30.73 13.82 0.00 5.54
3746 4438 3.976701 AAGTCCAGCAATCCGGCCG 62.977 63.158 21.04 21.04 0.00 6.13
3747 4439 1.678970 AAAGTCCAGCAATCCGGCC 60.679 57.895 0.00 0.00 0.00 6.13
3748 4440 1.508088 CAAAGTCCAGCAATCCGGC 59.492 57.895 0.00 0.00 0.00 6.13
3749 4441 0.609131 ACCAAAGTCCAGCAATCCGG 60.609 55.000 0.00 0.00 0.00 5.14
3750 4442 0.523072 CACCAAAGTCCAGCAATCCG 59.477 55.000 0.00 0.00 0.00 4.18
3751 4443 1.909700 TCACCAAAGTCCAGCAATCC 58.090 50.000 0.00 0.00 0.00 3.01
3752 4444 3.149196 TCTTCACCAAAGTCCAGCAATC 58.851 45.455 0.00 0.00 36.31 2.67
3753 4445 3.152341 CTCTTCACCAAAGTCCAGCAAT 58.848 45.455 0.00 0.00 36.31 3.56
3754 4446 2.172505 TCTCTTCACCAAAGTCCAGCAA 59.827 45.455 0.00 0.00 36.31 3.91
3755 4447 1.768275 TCTCTTCACCAAAGTCCAGCA 59.232 47.619 0.00 0.00 36.31 4.41
3756 4448 2.147150 GTCTCTTCACCAAAGTCCAGC 58.853 52.381 0.00 0.00 36.31 4.85
3757 4449 2.035961 TCGTCTCTTCACCAAAGTCCAG 59.964 50.000 0.00 0.00 36.31 3.86
3758 4450 2.036387 TCGTCTCTTCACCAAAGTCCA 58.964 47.619 0.00 0.00 36.31 4.02
3759 4451 2.814280 TCGTCTCTTCACCAAAGTCC 57.186 50.000 0.00 0.00 36.31 3.85
3760 4452 4.369182 TCTTTCGTCTCTTCACCAAAGTC 58.631 43.478 0.00 0.00 36.31 3.01
3761 4453 4.402056 TCTTTCGTCTCTTCACCAAAGT 57.598 40.909 0.00 0.00 36.31 2.66
3762 4454 5.683859 CATTCTTTCGTCTCTTCACCAAAG 58.316 41.667 0.00 0.00 36.22 2.77
3763 4455 4.024048 GCATTCTTTCGTCTCTTCACCAAA 60.024 41.667 0.00 0.00 0.00 3.28
3764 4456 3.498397 GCATTCTTTCGTCTCTTCACCAA 59.502 43.478 0.00 0.00 0.00 3.67
3765 4457 3.067106 GCATTCTTTCGTCTCTTCACCA 58.933 45.455 0.00 0.00 0.00 4.17
3766 4458 2.416893 GGCATTCTTTCGTCTCTTCACC 59.583 50.000 0.00 0.00 0.00 4.02
3767 4459 2.416893 GGGCATTCTTTCGTCTCTTCAC 59.583 50.000 0.00 0.00 0.00 3.18
3768 4460 2.699954 GGGCATTCTTTCGTCTCTTCA 58.300 47.619 0.00 0.00 0.00 3.02
3769 4461 1.661112 CGGGCATTCTTTCGTCTCTTC 59.339 52.381 0.00 0.00 0.00 2.87
3770 4462 1.726853 CGGGCATTCTTTCGTCTCTT 58.273 50.000 0.00 0.00 0.00 2.85
3771 4463 0.741221 GCGGGCATTCTTTCGTCTCT 60.741 55.000 0.00 0.00 0.00 3.10
3772 4464 1.706287 GGCGGGCATTCTTTCGTCTC 61.706 60.000 0.00 0.00 0.00 3.36
3773 4465 1.745489 GGCGGGCATTCTTTCGTCT 60.745 57.895 0.00 0.00 0.00 4.18
3774 4466 2.791927 GGCGGGCATTCTTTCGTC 59.208 61.111 0.00 0.00 0.00 4.20
3775 4467 3.124921 CGGCGGGCATTCTTTCGT 61.125 61.111 0.00 0.00 0.00 3.85
3776 4468 3.876198 CCGGCGGGCATTCTTTCG 61.876 66.667 20.56 0.00 0.00 3.46
3777 4469 1.591504 TTTCCGGCGGGCATTCTTTC 61.592 55.000 27.98 0.00 0.00 2.62
3778 4470 1.182385 TTTTCCGGCGGGCATTCTTT 61.182 50.000 27.98 0.00 0.00 2.52
3779 4471 1.595093 CTTTTCCGGCGGGCATTCTT 61.595 55.000 27.98 0.00 0.00 2.52
3780 4472 2.034999 TTTTCCGGCGGGCATTCT 59.965 55.556 27.98 0.00 0.00 2.40
3781 4473 2.489751 CTTTTCCGGCGGGCATTC 59.510 61.111 27.98 0.00 0.00 2.67
3782 4474 3.758931 GCTTTTCCGGCGGGCATT 61.759 61.111 27.98 0.00 0.00 3.56
3783 4475 4.740822 AGCTTTTCCGGCGGGCAT 62.741 61.111 27.98 8.41 34.52 4.40
3785 4477 3.675619 TAGAGCTTTTCCGGCGGGC 62.676 63.158 27.98 21.25 34.52 6.13
3786 4478 1.521681 CTAGAGCTTTTCCGGCGGG 60.522 63.158 27.98 11.17 34.52 6.13
3787 4479 0.105039 ATCTAGAGCTTTTCCGGCGG 59.895 55.000 22.51 22.51 34.52 6.13
3788 4480 1.492720 GATCTAGAGCTTTTCCGGCG 58.507 55.000 0.00 0.00 34.52 6.46
3789 4481 1.492720 CGATCTAGAGCTTTTCCGGC 58.507 55.000 6.41 0.00 0.00 6.13
3790 4482 1.870167 GCCGATCTAGAGCTTTTCCGG 60.870 57.143 6.41 0.00 38.79 5.14
3791 4483 1.492720 GCCGATCTAGAGCTTTTCCG 58.507 55.000 6.41 0.00 0.00 4.30
3792 4484 1.492720 CGCCGATCTAGAGCTTTTCC 58.507 55.000 6.41 0.00 0.00 3.13
3793 4485 0.855995 GCGCCGATCTAGAGCTTTTC 59.144 55.000 6.41 0.00 0.00 2.29
3794 4486 0.530870 GGCGCCGATCTAGAGCTTTT 60.531 55.000 12.58 0.00 0.00 2.27
3795 4487 1.068250 GGCGCCGATCTAGAGCTTT 59.932 57.895 12.58 0.00 0.00 3.51
3796 4488 2.731374 GGCGCCGATCTAGAGCTT 59.269 61.111 12.58 0.00 0.00 3.74
3797 4489 3.665226 CGGCGCCGATCTAGAGCT 61.665 66.667 44.86 0.00 42.83 4.09
3840 4532 3.138930 ATCTGGATCGCCGTGACCG 62.139 63.158 0.00 0.00 36.79 4.79
3841 4533 1.300233 GATCTGGATCGCCGTGACC 60.300 63.158 0.00 0.00 36.79 4.02
3842 4534 4.327885 GATCTGGATCGCCGTGAC 57.672 61.111 0.00 0.00 36.79 3.67
3850 4542 2.731348 GCGTCGCCGATCTGGATC 60.731 66.667 5.75 0.83 42.00 3.36
3851 4543 3.200887 GAGCGTCGCCGATCTGGAT 62.201 63.158 14.86 0.00 45.63 3.41
3852 4544 3.889044 GAGCGTCGCCGATCTGGA 61.889 66.667 14.86 0.00 45.63 3.86
3870 4562 1.701704 CAAATTCAAACGCTCCTGGC 58.298 50.000 0.00 0.00 37.64 4.85
3871 4563 1.270550 AGCAAATTCAAACGCTCCTGG 59.729 47.619 0.00 0.00 0.00 4.45
3872 4564 2.589014 GAGCAAATTCAAACGCTCCTG 58.411 47.619 0.00 0.00 44.06 3.86
3873 4565 1.197721 CGAGCAAATTCAAACGCTCCT 59.802 47.619 0.00 0.00 46.47 3.69
3874 4566 1.606606 CGAGCAAATTCAAACGCTCC 58.393 50.000 0.00 0.00 46.47 4.70
3875 4567 1.606606 CCGAGCAAATTCAAACGCTC 58.393 50.000 0.00 0.00 45.87 5.03
3876 4568 0.387239 GCCGAGCAAATTCAAACGCT 60.387 50.000 0.00 0.00 37.44 5.07
3877 4569 1.344226 GGCCGAGCAAATTCAAACGC 61.344 55.000 0.00 0.00 0.00 4.84
3878 4570 1.065031 CGGCCGAGCAAATTCAAACG 61.065 55.000 24.07 0.00 0.00 3.60
3879 4571 0.239879 TCGGCCGAGCAAATTCAAAC 59.760 50.000 27.28 0.00 0.00 2.93
3880 4572 0.521291 CTCGGCCGAGCAAATTCAAA 59.479 50.000 39.83 8.51 35.31 2.69
3881 4573 2.170738 CTCGGCCGAGCAAATTCAA 58.829 52.632 39.83 9.10 35.31 2.69
3882 4574 3.889227 CTCGGCCGAGCAAATTCA 58.111 55.556 39.83 9.92 35.31 2.57


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.