Multiple sequence alignment - TraesCS3B01G498500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G498500 chr3B 100.000 3255 0 0 1 3255 742102864 742099610 0.000000e+00 6011.0
1 TraesCS3B01G498500 chr3B 86.696 684 81 6 25 706 664127997 664127322 0.000000e+00 750.0
2 TraesCS3B01G498500 chr3B 90.000 70 4 1 1929 1995 742157881 742157950 1.610000e-13 87.9
3 TraesCS3B01G498500 chr3B 92.157 51 4 0 1945 1995 742148060 742148110 4.500000e-09 73.1
4 TraesCS3B01G498500 chr3B 100.000 30 0 0 1 30 536646426 536646455 4.540000e-04 56.5
5 TraesCS3B01G498500 chr3B 100.000 30 0 0 1 30 781367247 781367276 4.540000e-04 56.5
6 TraesCS3B01G498500 chr3D 87.493 1903 154 35 859 2741 559124648 559126486 0.000000e+00 2119.0
7 TraesCS3B01G498500 chr3D 90.086 696 59 7 25 714 22980015 22980706 0.000000e+00 894.0
8 TraesCS3B01G498500 chr3D 90.358 363 22 9 2408 2766 559133799 559134152 6.360000e-127 464.0
9 TraesCS3B01G498500 chr3D 76.786 280 43 12 1721 1995 559158799 559159061 1.580000e-28 137.0
10 TraesCS3B01G498500 chr3A 84.885 1965 155 52 804 2726 695531767 695533631 0.000000e+00 1853.0
11 TraesCS3B01G498500 chr3A 75.357 280 50 11 1721 1995 695658081 695658346 2.050000e-22 117.0
12 TraesCS3B01G498500 chr7B 90.922 683 59 3 25 704 79382960 79383642 0.000000e+00 915.0
13 TraesCS3B01G498500 chr7B 90.044 683 60 5 27 707 92292080 92291404 0.000000e+00 878.0
14 TraesCS3B01G498500 chr7B 97.967 492 8 2 2764 3255 140136763 140137252 0.000000e+00 852.0
15 TraesCS3B01G498500 chr7B 97.149 491 12 2 2767 3255 37555918 37556408 0.000000e+00 828.0
16 TraesCS3B01G498500 chr7B 88.321 685 69 6 25 706 69718139 69718815 0.000000e+00 811.0
17 TraesCS3B01G498500 chr7B 87.153 685 79 6 27 708 667099761 667100439 0.000000e+00 769.0
18 TraesCS3B01G498500 chr7B 100.000 30 0 0 1 30 727899591 727899620 4.540000e-04 56.5
19 TraesCS3B01G498500 chr7B 100.000 30 0 0 1 30 727926248 727926277 4.540000e-04 56.5
20 TraesCS3B01G498500 chr2D 89.197 685 66 4 25 707 543782771 543783449 0.000000e+00 848.0
21 TraesCS3B01G498500 chr2D 100.000 30 0 0 1 30 543781065 543781094 4.540000e-04 56.5
22 TraesCS3B01G498500 chr6B 97.352 491 9 3 2767 3255 13778295 13778783 0.000000e+00 832.0
23 TraesCS3B01G498500 chr6B 96.768 495 8 2 2767 3255 15315206 15314714 0.000000e+00 819.0
24 TraesCS3B01G498500 chr6B 96.748 492 10 2 2765 3255 626274013 626274499 0.000000e+00 815.0
25 TraesCS3B01G498500 chr4B 96.970 495 7 2 2767 3255 374304144 374303652 0.000000e+00 824.0
26 TraesCS3B01G498500 chr4B 88.613 685 67 7 25 704 365620100 365620778 0.000000e+00 822.0
27 TraesCS3B01G498500 chr4A 96.761 494 8 5 2767 3255 666761197 666761687 0.000000e+00 817.0
28 TraesCS3B01G498500 chr1B 96.755 493 9 4 2767 3255 56948824 56948335 0.000000e+00 815.0
29 TraesCS3B01G498500 chr1B 96.933 489 9 4 2767 3255 422380584 422381066 0.000000e+00 815.0
30 TraesCS3B01G498500 chr1B 97.143 35 1 0 716 750 2546947 2546981 3.510000e-05 60.2
31 TraesCS3B01G498500 chr1B 97.143 35 1 0 716 750 2603684 2603718 3.510000e-05 60.2
32 TraesCS3B01G498500 chr1B 100.000 30 0 0 1 30 527380237 527380208 4.540000e-04 56.5
33 TraesCS3B01G498500 chr1B 100.000 29 0 0 2 30 119602601 119602573 2.000000e-03 54.7
34 TraesCS3B01G498500 chr5B 87.954 689 68 10 28 709 26912248 26911568 0.000000e+00 798.0
35 TraesCS3B01G498500 chr5B 100.000 30 0 0 1 30 610111765 610111794 4.540000e-04 56.5
36 TraesCS3B01G498500 chr5B 100.000 29 0 0 2 30 26913168 26913140 2.000000e-03 54.7
37 TraesCS3B01G498500 chr2B 90.000 170 13 1 1003 1172 713876403 713876568 1.970000e-52 217.0
38 TraesCS3B01G498500 chr2B 96.875 32 1 0 714 745 85072763 85072732 2.000000e-03 54.7
39 TraesCS3B01G498500 chrUn 97.143 35 1 0 716 750 310719358 310719324 3.510000e-05 60.2
40 TraesCS3B01G498500 chr6D 97.059 34 1 0 708 741 25794643 25794610 1.260000e-04 58.4
41 TraesCS3B01G498500 chr5D 97.059 34 1 0 719 752 496955885 496955852 1.260000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G498500 chr3B 742099610 742102864 3254 True 6011.00 6011 100.0000 1 3255 1 chr3B.!!$R2 3254
1 TraesCS3B01G498500 chr3B 664127322 664127997 675 True 750.00 750 86.6960 25 706 1 chr3B.!!$R1 681
2 TraesCS3B01G498500 chr3D 559124648 559126486 1838 False 2119.00 2119 87.4930 859 2741 1 chr3D.!!$F2 1882
3 TraesCS3B01G498500 chr3D 22980015 22980706 691 False 894.00 894 90.0860 25 714 1 chr3D.!!$F1 689
4 TraesCS3B01G498500 chr3A 695531767 695533631 1864 False 1853.00 1853 84.8850 804 2726 1 chr3A.!!$F1 1922
5 TraesCS3B01G498500 chr7B 79382960 79383642 682 False 915.00 915 90.9220 25 704 1 chr7B.!!$F3 679
6 TraesCS3B01G498500 chr7B 92291404 92292080 676 True 878.00 878 90.0440 27 707 1 chr7B.!!$R1 680
7 TraesCS3B01G498500 chr7B 69718139 69718815 676 False 811.00 811 88.3210 25 706 1 chr7B.!!$F2 681
8 TraesCS3B01G498500 chr7B 667099761 667100439 678 False 769.00 769 87.1530 27 708 1 chr7B.!!$F5 681
9 TraesCS3B01G498500 chr2D 543781065 543783449 2384 False 452.25 848 94.5985 1 707 2 chr2D.!!$F1 706
10 TraesCS3B01G498500 chr4B 365620100 365620778 678 False 822.00 822 88.6130 25 704 1 chr4B.!!$F1 679
11 TraesCS3B01G498500 chr5B 26911568 26913168 1600 True 426.35 798 93.9770 2 709 2 chr5B.!!$R1 707

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
817 2525 0.17576 ACCATCGACGGGTCTCAATG 59.824 55.0 1.13 0.0 31.49 2.82 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2804 4565 0.035739 TGGAACCGGCACTAAAGGAC 59.964 55.0 0.0 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 1770 2.165167 CTCCAAGCTCAAGATGCCAAA 58.835 47.619 0.00 0.00 0.00 3.28
119 1802 0.537188 GACCTCGCCTTCTTGATGGA 59.463 55.000 6.72 0.00 0.00 3.41
206 1889 3.576118 CTCATCCTGAATCAGATACCGGT 59.424 47.826 13.98 13.98 32.44 5.28
336 2034 1.572085 CGCCCAACAGCACAGAAGAG 61.572 60.000 0.00 0.00 0.00 2.85
344 2042 2.507992 CACAGAAGAGGCGCCGAG 60.508 66.667 23.20 10.88 0.00 4.63
372 2073 1.888436 AAGCTGCGTCGATTCCTCCA 61.888 55.000 0.00 0.00 0.00 3.86
384 2085 4.077184 CCTCCAAGCCCGCGTACA 62.077 66.667 4.92 0.00 0.00 2.90
385 2086 2.047655 CTCCAAGCCCGCGTACAA 60.048 61.111 4.92 0.00 0.00 2.41
469 2170 0.314618 TTGTGCGCCGAACTACTACA 59.685 50.000 4.18 0.00 0.00 2.74
510 2211 0.309922 GAACTGTGACACCGACTCGA 59.690 55.000 2.45 0.00 0.00 4.04
547 2249 4.452795 TGATCGCGGTTTGATGTTTCTTTA 59.547 37.500 6.13 0.00 0.00 1.85
583 2287 5.941058 TGTTTTTCGAATATGGAGCACCTTA 59.059 36.000 0.00 0.00 37.04 2.69
710 2418 1.422531 CTGGAGATGCTCTTAGGGCT 58.577 55.000 5.43 0.00 0.00 5.19
711 2419 2.603021 CTGGAGATGCTCTTAGGGCTA 58.397 52.381 5.43 0.00 0.00 3.93
713 2421 1.899142 GGAGATGCTCTTAGGGCTAGG 59.101 57.143 5.43 0.00 0.00 3.02
714 2422 2.604139 GAGATGCTCTTAGGGCTAGGT 58.396 52.381 5.43 0.00 0.00 3.08
715 2423 2.560981 GAGATGCTCTTAGGGCTAGGTC 59.439 54.545 5.43 0.00 0.00 3.85
716 2424 2.178984 AGATGCTCTTAGGGCTAGGTCT 59.821 50.000 5.43 1.05 0.00 3.85
717 2425 1.781786 TGCTCTTAGGGCTAGGTCTG 58.218 55.000 5.43 0.00 0.00 3.51
718 2426 1.288037 TGCTCTTAGGGCTAGGTCTGA 59.712 52.381 5.43 0.00 0.00 3.27
719 2427 1.960689 GCTCTTAGGGCTAGGTCTGAG 59.039 57.143 0.00 0.00 0.00 3.35
720 2428 2.688515 GCTCTTAGGGCTAGGTCTGAGT 60.689 54.545 0.00 0.00 0.00 3.41
721 2429 3.219281 CTCTTAGGGCTAGGTCTGAGTC 58.781 54.545 0.00 0.00 0.00 3.36
722 2430 1.950909 CTTAGGGCTAGGTCTGAGTCG 59.049 57.143 0.00 0.00 0.00 4.18
723 2431 1.210538 TAGGGCTAGGTCTGAGTCGA 58.789 55.000 0.00 0.00 0.00 4.20
724 2432 0.394625 AGGGCTAGGTCTGAGTCGAC 60.395 60.000 7.70 7.70 0.00 4.20
725 2433 0.394625 GGGCTAGGTCTGAGTCGACT 60.395 60.000 20.18 20.18 34.38 4.18
726 2434 0.736053 GGCTAGGTCTGAGTCGACTG 59.264 60.000 25.58 9.95 34.38 3.51
727 2435 1.679336 GGCTAGGTCTGAGTCGACTGA 60.679 57.143 25.58 14.84 34.38 3.41
728 2436 1.668751 GCTAGGTCTGAGTCGACTGAG 59.331 57.143 25.58 24.77 34.38 3.35
729 2437 2.678479 GCTAGGTCTGAGTCGACTGAGA 60.678 54.545 27.84 27.84 33.86 3.27
730 2438 2.799126 AGGTCTGAGTCGACTGAGAT 57.201 50.000 32.53 18.35 38.43 2.75
731 2439 3.080300 AGGTCTGAGTCGACTGAGATT 57.920 47.619 32.53 22.39 38.43 2.40
732 2440 3.426615 AGGTCTGAGTCGACTGAGATTT 58.573 45.455 32.53 22.08 38.43 2.17
733 2441 4.590918 AGGTCTGAGTCGACTGAGATTTA 58.409 43.478 32.53 12.04 38.43 1.40
734 2442 5.010933 AGGTCTGAGTCGACTGAGATTTAA 58.989 41.667 32.53 11.67 38.43 1.52
735 2443 5.654650 AGGTCTGAGTCGACTGAGATTTAAT 59.345 40.000 32.53 16.65 38.43 1.40
736 2444 5.974751 GGTCTGAGTCGACTGAGATTTAATC 59.025 44.000 32.53 20.14 38.43 1.75
737 2445 6.404844 GGTCTGAGTCGACTGAGATTTAATCA 60.405 42.308 32.53 15.53 38.43 2.57
738 2446 7.030165 GTCTGAGTCGACTGAGATTTAATCAA 58.970 38.462 32.53 8.86 38.43 2.57
739 2447 7.219917 GTCTGAGTCGACTGAGATTTAATCAAG 59.780 40.741 32.53 5.67 38.43 3.02
740 2448 6.925211 TGAGTCGACTGAGATTTAATCAAGT 58.075 36.000 25.58 9.85 33.02 3.16
741 2449 7.030165 TGAGTCGACTGAGATTTAATCAAGTC 58.970 38.462 25.58 21.03 39.71 3.01
742 2450 7.094162 TGAGTCGACTGAGATTTAATCAAGTCT 60.094 37.037 25.58 14.58 40.35 3.24
743 2451 7.607250 AGTCGACTGAGATTTAATCAAGTCTT 58.393 34.615 19.30 14.82 40.35 3.01
744 2452 8.740906 AGTCGACTGAGATTTAATCAAGTCTTA 58.259 33.333 19.30 16.34 40.35 2.10
745 2453 9.355215 GTCGACTGAGATTTAATCAAGTCTTAA 57.645 33.333 24.73 14.79 40.35 1.85
755 2463 9.653287 ATTTAATCAAGTCTTAATCGAGTGACA 57.347 29.630 6.19 0.00 32.41 3.58
756 2464 9.653287 TTTAATCAAGTCTTAATCGAGTGACAT 57.347 29.630 6.19 0.00 32.41 3.06
759 2467 8.635877 ATCAAGTCTTAATCGAGTGACATAAC 57.364 34.615 6.19 0.00 32.41 1.89
760 2468 7.599171 TCAAGTCTTAATCGAGTGACATAACA 58.401 34.615 6.19 0.00 32.41 2.41
761 2469 8.251026 TCAAGTCTTAATCGAGTGACATAACAT 58.749 33.333 6.19 0.00 32.41 2.71
762 2470 7.993821 AGTCTTAATCGAGTGACATAACATG 57.006 36.000 6.19 0.00 32.41 3.21
763 2471 7.772166 AGTCTTAATCGAGTGACATAACATGA 58.228 34.615 0.00 0.00 32.41 3.07
764 2472 8.251026 AGTCTTAATCGAGTGACATAACATGAA 58.749 33.333 0.00 0.00 32.41 2.57
765 2473 8.869897 GTCTTAATCGAGTGACATAACATGAAA 58.130 33.333 0.00 0.00 0.00 2.69
766 2474 9.087424 TCTTAATCGAGTGACATAACATGAAAG 57.913 33.333 0.00 0.00 0.00 2.62
767 2475 6.668541 AATCGAGTGACATAACATGAAAGG 57.331 37.500 0.00 0.00 0.00 3.11
768 2476 4.503910 TCGAGTGACATAACATGAAAGGG 58.496 43.478 0.00 0.00 0.00 3.95
769 2477 4.221924 TCGAGTGACATAACATGAAAGGGA 59.778 41.667 0.00 0.00 0.00 4.20
770 2478 4.935205 CGAGTGACATAACATGAAAGGGAA 59.065 41.667 0.00 0.00 0.00 3.97
771 2479 5.411361 CGAGTGACATAACATGAAAGGGAAA 59.589 40.000 0.00 0.00 0.00 3.13
772 2480 6.072728 CGAGTGACATAACATGAAAGGGAAAA 60.073 38.462 0.00 0.00 0.00 2.29
773 2481 7.521423 CGAGTGACATAACATGAAAGGGAAAAA 60.521 37.037 0.00 0.00 0.00 1.94
801 2509 8.966155 TTCACATACCTGATTATAGGATACCA 57.034 34.615 0.00 0.00 40.42 3.25
802 2510 9.560860 TTCACATACCTGATTATAGGATACCAT 57.439 33.333 0.00 0.00 40.42 3.55
807 2515 5.357314 ACCTGATTATAGGATACCATCGACG 59.643 44.000 0.00 0.00 40.42 5.12
817 2525 0.175760 ACCATCGACGGGTCTCAATG 59.824 55.000 1.13 0.00 31.49 2.82
818 2526 0.530650 CCATCGACGGGTCTCAATGG 60.531 60.000 0.00 9.07 0.00 3.16
822 2530 1.100510 CGACGGGTCTCAATGGACTA 58.899 55.000 0.00 0.00 36.55 2.59
834 2542 6.874134 GTCTCAATGGACTAAGACTTAGCAAA 59.126 38.462 20.05 7.74 36.71 3.68
837 2545 7.224297 TCAATGGACTAAGACTTAGCAAAACT 58.776 34.615 20.05 1.71 36.71 2.66
910 2620 5.628797 TGTTAGGTGAGCCATGATATCAA 57.371 39.130 9.99 0.00 37.19 2.57
917 2627 6.438425 AGGTGAGCCATGATATCAAAAACTTT 59.562 34.615 9.99 0.00 37.19 2.66
920 2630 7.814107 GTGAGCCATGATATCAAAAACTTTTCA 59.186 33.333 9.99 3.76 0.00 2.69
922 2632 7.899973 AGCCATGATATCAAAAACTTTTCACT 58.100 30.769 9.99 0.00 0.00 3.41
925 2635 8.853345 CCATGATATCAAAAACTTTTCACTTCG 58.147 33.333 9.99 0.00 0.00 3.79
928 2638 8.081633 TGATATCAAAAACTTTTCACTTCGCAT 58.918 29.630 1.98 0.00 0.00 4.73
941 2651 6.757897 TCACTTCGCATCCTGAAATTTTAT 57.242 33.333 0.00 0.00 0.00 1.40
956 2666 6.203723 TGAAATTTTATTTTCAAGCCAACCGG 59.796 34.615 0.00 0.00 41.39 5.28
975 2685 2.733956 GGCCATTGACCAAATACTCCA 58.266 47.619 0.00 0.00 0.00 3.86
989 2699 0.325296 ACTCCAGTGCGATTCCCCTA 60.325 55.000 0.00 0.00 0.00 3.53
1000 2710 1.988846 GATTCCCCTAATCCCCTCCAG 59.011 57.143 0.00 0.00 38.47 3.86
1039 2752 2.262915 CCGTCTGACTCCACCTGC 59.737 66.667 6.21 0.00 0.00 4.85
1040 2753 2.574018 CCGTCTGACTCCACCTGCA 61.574 63.158 6.21 0.00 0.00 4.41
1041 2754 1.373497 CGTCTGACTCCACCTGCAC 60.373 63.158 6.21 0.00 0.00 4.57
1095 2808 4.753662 ACCCTCGCCGTGCTCCTA 62.754 66.667 0.00 0.00 0.00 2.94
1098 2811 1.822613 CCTCGCCGTGCTCCTACTA 60.823 63.158 0.00 0.00 0.00 1.82
1155 2868 2.052690 CATCTCCGACGACCAGGGT 61.053 63.158 0.00 0.00 0.00 4.34
1197 2910 0.250209 CCCAAGATGATCAGGCGGAG 60.250 60.000 0.09 0.00 0.00 4.63
1386 3099 1.811266 CGAGGCTTGTGTCCATCCG 60.811 63.158 0.00 0.00 0.00 4.18
1440 3153 1.294780 CGAGGAACAGCAAGAGCCT 59.705 57.895 0.00 0.00 43.56 4.58
1443 3156 1.552792 GAGGAACAGCAAGAGCCTAGT 59.447 52.381 0.00 0.00 43.56 2.57
1445 3158 1.002544 GGAACAGCAAGAGCCTAGTGT 59.997 52.381 0.00 0.00 43.56 3.55
1446 3159 2.072298 GAACAGCAAGAGCCTAGTGTG 58.928 52.381 0.00 0.00 43.56 3.82
1447 3160 0.321122 ACAGCAAGAGCCTAGTGTGC 60.321 55.000 0.00 0.00 43.56 4.57
1449 3162 2.103042 GCAAGAGCCTAGTGTGCCG 61.103 63.158 0.00 0.00 33.58 5.69
1527 3240 1.129437 GAGAAGCTGTTTCATGGCGAC 59.871 52.381 7.01 0.00 38.31 5.19
1545 3261 1.807573 CGAGGAAGAGGCAGCGAAC 60.808 63.158 0.00 0.00 0.00 3.95
1566 3282 0.742281 CGTGGAAGGTGGAGATGCTG 60.742 60.000 0.00 0.00 0.00 4.41
1598 3314 3.508840 CGGCATCCGCTTTCACCC 61.509 66.667 0.00 0.00 41.17 4.61
1613 3329 3.727258 CCCCCGCCACCATCTTCA 61.727 66.667 0.00 0.00 0.00 3.02
1620 3336 0.539438 GCCACCATCTTCACCACCAA 60.539 55.000 0.00 0.00 0.00 3.67
1629 3345 0.393132 TTCACCACCAACACGAGCAA 60.393 50.000 0.00 0.00 0.00 3.91
1667 3383 2.743928 CCACGAGCAGGACAAGGC 60.744 66.667 0.00 0.00 0.00 4.35
1675 3391 1.073722 CAGGACAAGGCTGAAGGCA 59.926 57.895 6.65 0.00 44.01 4.75
1695 3411 1.361668 CGAGCATGAACCTGTTCGGG 61.362 60.000 0.00 0.00 43.45 5.14
1722 3438 2.264480 CACCGCCACCATCTTCGA 59.736 61.111 0.00 0.00 0.00 3.71
1903 3619 2.392821 CGATCATGAGAAGGAGCTTCG 58.607 52.381 0.09 0.00 44.34 3.79
1936 3655 4.514585 GCCACCACCACCACCACA 62.515 66.667 0.00 0.00 0.00 4.17
2000 3719 3.614092 TGAACCGATTCTAGACGTACCT 58.386 45.455 0.00 0.00 35.69 3.08
2001 3720 4.769688 TGAACCGATTCTAGACGTACCTA 58.230 43.478 0.00 0.00 35.69 3.08
2002 3721 4.572389 TGAACCGATTCTAGACGTACCTAC 59.428 45.833 0.00 0.00 35.69 3.18
2003 3722 4.142609 ACCGATTCTAGACGTACCTACA 57.857 45.455 0.00 0.00 0.00 2.74
2004 3723 4.517285 ACCGATTCTAGACGTACCTACAA 58.483 43.478 0.00 0.00 0.00 2.41
2005 3724 4.574013 ACCGATTCTAGACGTACCTACAAG 59.426 45.833 0.00 0.00 0.00 3.16
2006 3725 4.574013 CCGATTCTAGACGTACCTACAAGT 59.426 45.833 0.00 0.00 0.00 3.16
2007 3726 5.755375 CCGATTCTAGACGTACCTACAAGTA 59.245 44.000 0.00 0.00 0.00 2.24
2008 3727 6.426328 CCGATTCTAGACGTACCTACAAGTAT 59.574 42.308 0.00 0.00 0.00 2.12
2009 3728 7.359933 CCGATTCTAGACGTACCTACAAGTATC 60.360 44.444 0.00 0.00 0.00 2.24
2010 3729 6.834959 TTCTAGACGTACCTACAAGTATCG 57.165 41.667 0.00 0.00 0.00 2.92
2011 3730 6.149129 TCTAGACGTACCTACAAGTATCGA 57.851 41.667 0.00 0.00 0.00 3.59
2012 3731 6.753180 TCTAGACGTACCTACAAGTATCGAT 58.247 40.000 2.16 2.16 0.00 3.59
2013 3732 5.921004 AGACGTACCTACAAGTATCGATC 57.079 43.478 0.00 0.00 0.00 3.69
2077 3796 2.455674 AATCTGTTCGCTGCACTGTA 57.544 45.000 0.00 0.00 0.00 2.74
2105 3824 0.524862 GTGGAGTGCTCTGCCATTTG 59.475 55.000 4.77 0.00 33.66 2.32
2146 3873 7.990886 TCCTATTCCACATTACATTACCACTTC 59.009 37.037 0.00 0.00 0.00 3.01
2228 3955 2.939103 GGAGATTGTACGAGCAGCAATT 59.061 45.455 0.34 0.00 33.56 2.32
2229 3956 3.375299 GGAGATTGTACGAGCAGCAATTT 59.625 43.478 0.34 0.00 33.56 1.82
2230 3957 4.142600 GGAGATTGTACGAGCAGCAATTTT 60.143 41.667 0.34 0.00 33.56 1.82
2231 3958 5.064707 GGAGATTGTACGAGCAGCAATTTTA 59.935 40.000 0.34 0.00 33.56 1.52
2232 3959 6.238484 GGAGATTGTACGAGCAGCAATTTTAT 60.238 38.462 0.34 0.00 33.56 1.40
2307 4052 8.610248 TGTGTAATATTATTGTTATCCCGTGG 57.390 34.615 0.00 0.00 0.00 4.94
2322 4067 3.080319 CCCGTGGGGTTCGTATTAAAAA 58.920 45.455 0.00 0.00 38.25 1.94
2345 4090 1.530293 GGCATGTTCATCGATCTCTGC 59.470 52.381 0.00 0.70 0.00 4.26
2349 4094 4.201891 GCATGTTCATCGATCTCTGCTTTT 60.202 41.667 0.00 0.00 0.00 2.27
2353 4098 2.768527 TCATCGATCTCTGCTTTTCCCT 59.231 45.455 0.00 0.00 0.00 4.20
2354 4099 2.969628 TCGATCTCTGCTTTTCCCTC 57.030 50.000 0.00 0.00 0.00 4.30
2355 4100 1.135139 TCGATCTCTGCTTTTCCCTCG 59.865 52.381 0.00 0.00 0.00 4.63
2356 4101 1.294857 GATCTCTGCTTTTCCCTCGC 58.705 55.000 0.00 0.00 0.00 5.03
2357 4102 0.460987 ATCTCTGCTTTTCCCTCGCG 60.461 55.000 0.00 0.00 0.00 5.87
2361 4117 0.385974 CTGCTTTTCCCTCGCGTTTG 60.386 55.000 5.77 0.00 0.00 2.93
2372 4128 0.237235 TCGCGTTTGCATGTTCCTTC 59.763 50.000 5.77 0.00 42.97 3.46
2379 4135 4.546570 GTTTGCATGTTCCTTCTGTTACC 58.453 43.478 0.00 0.00 0.00 2.85
2403 4160 9.787435 ACCAGTTATCAATTGTAGTGTTTAGAA 57.213 29.630 5.13 0.00 0.00 2.10
2409 4166 8.970691 ATCAATTGTAGTGTTTAGAATTGCAC 57.029 30.769 5.13 0.00 37.79 4.57
2411 4168 8.575589 TCAATTGTAGTGTTTAGAATTGCACAT 58.424 29.630 5.13 0.00 37.79 3.21
2444 4201 6.784068 TTCAACAAAATTTCGACGAAACTC 57.216 33.333 24.21 0.00 34.23 3.01
2452 4209 5.578005 ATTTCGACGAAACTCCTGAGATA 57.422 39.130 24.21 0.00 34.23 1.98
2454 4211 4.815040 TCGACGAAACTCCTGAGATATC 57.185 45.455 0.00 0.00 0.00 1.63
2459 4216 3.315470 CGAAACTCCTGAGATATCGGTGA 59.685 47.826 0.22 0.00 32.37 4.02
2478 4235 4.261031 GGTGAGCGCCGAAATATTTGTAAT 60.261 41.667 5.17 0.00 0.00 1.89
2479 4236 5.270853 GTGAGCGCCGAAATATTTGTAATT 58.729 37.500 5.17 0.00 0.00 1.40
2480 4237 6.423862 GTGAGCGCCGAAATATTTGTAATTA 58.576 36.000 5.17 0.00 0.00 1.40
2481 4238 6.908284 GTGAGCGCCGAAATATTTGTAATTAA 59.092 34.615 5.17 0.00 0.00 1.40
2598 4356 6.745794 TCCAGAATTTTTCCCACTGAAATT 57.254 33.333 0.00 0.00 42.38 1.82
2599 4357 7.135591 TCCAGAATTTTTCCCACTGAAATTT 57.864 32.000 0.00 0.00 42.38 1.82
2600 4358 6.991531 TCCAGAATTTTTCCCACTGAAATTTG 59.008 34.615 0.00 0.00 42.38 2.32
2648 4407 4.973663 CCGAAATATTAAACCATCGTTGCC 59.026 41.667 4.73 0.00 30.72 4.52
2666 4425 0.593128 CCGCTTGGGAACTCAAACTG 59.407 55.000 0.00 0.00 38.47 3.16
2670 4429 2.799562 GCTTGGGAACTCAAACTGTTGC 60.800 50.000 0.00 0.00 34.50 4.17
2671 4430 2.136298 TGGGAACTCAAACTGTTGCA 57.864 45.000 0.00 0.00 37.46 4.08
2674 4433 2.481276 GGGAACTCAAACTGTTGCAACC 60.481 50.000 26.14 9.39 37.46 3.77
2689 4450 5.594725 TGTTGCAACCTTGGTGTTTCTTATA 59.405 36.000 26.14 0.00 0.00 0.98
2700 4461 7.531857 TGGTGTTTCTTATATTCCTTTTGCA 57.468 32.000 0.00 0.00 0.00 4.08
2701 4462 8.133024 TGGTGTTTCTTATATTCCTTTTGCAT 57.867 30.769 0.00 0.00 0.00 3.96
2702 4463 8.034215 TGGTGTTTCTTATATTCCTTTTGCATG 58.966 33.333 0.00 0.00 0.00 4.06
2706 4467 7.969690 TTCTTATATTCCTTTTGCATGGGAA 57.030 32.000 14.84 14.84 42.33 3.97
2726 4487 4.388773 GGAAACGATTTGCCCTTTCATTTC 59.611 41.667 0.00 0.00 0.00 2.17
2729 4490 3.056607 ACGATTTGCCCTTTCATTTCAGG 60.057 43.478 0.00 0.00 0.00 3.86
2741 4502 5.999205 TTCATTTCAGGGCACATACATTT 57.001 34.783 0.00 0.00 0.00 2.32
2742 4503 5.999205 TCATTTCAGGGCACATACATTTT 57.001 34.783 0.00 0.00 0.00 1.82
2743 4504 5.964758 TCATTTCAGGGCACATACATTTTC 58.035 37.500 0.00 0.00 0.00 2.29
2744 4505 4.799564 TTTCAGGGCACATACATTTTCC 57.200 40.909 0.00 0.00 0.00 3.13
2745 4506 3.737559 TCAGGGCACATACATTTTCCT 57.262 42.857 0.00 0.00 0.00 3.36
2746 4507 4.046286 TCAGGGCACATACATTTTCCTT 57.954 40.909 0.00 0.00 0.00 3.36
2747 4508 5.186256 TCAGGGCACATACATTTTCCTTA 57.814 39.130 0.00 0.00 0.00 2.69
2748 4509 5.765510 TCAGGGCACATACATTTTCCTTAT 58.234 37.500 0.00 0.00 0.00 1.73
2749 4510 6.905736 TCAGGGCACATACATTTTCCTTATA 58.094 36.000 0.00 0.00 0.00 0.98
2750 4511 7.350382 TCAGGGCACATACATTTTCCTTATAA 58.650 34.615 0.00 0.00 0.00 0.98
2751 4512 7.836685 TCAGGGCACATACATTTTCCTTATAAA 59.163 33.333 0.00 0.00 0.00 1.40
2752 4513 8.474025 CAGGGCACATACATTTTCCTTATAAAA 58.526 33.333 0.00 0.00 33.15 1.52
2753 4514 9.212593 AGGGCACATACATTTTCCTTATAAAAT 57.787 29.630 0.00 0.00 39.14 1.82
2754 4515 9.830975 GGGCACATACATTTTCCTTATAAAATT 57.169 29.630 0.00 0.00 37.03 1.82
2765 4526 9.917129 TTTTCCTTATAAAATTTTCCGAACCTC 57.083 29.630 6.72 0.00 0.00 3.85
2766 4527 7.634671 TCCTTATAAAATTTTCCGAACCTCC 57.365 36.000 6.72 0.00 0.00 4.30
2767 4528 7.176490 TCCTTATAAAATTTTCCGAACCTCCA 58.824 34.615 6.72 0.00 0.00 3.86
2768 4529 7.121611 TCCTTATAAAATTTTCCGAACCTCCAC 59.878 37.037 6.72 0.00 0.00 4.02
2769 4530 7.122204 CCTTATAAAATTTTCCGAACCTCCACT 59.878 37.037 6.72 0.00 0.00 4.00
2770 4531 9.169592 CTTATAAAATTTTCCGAACCTCCACTA 57.830 33.333 6.72 0.00 0.00 2.74
2771 4532 5.959618 AAAATTTTCCGAACCTCCACTAG 57.040 39.130 0.00 0.00 0.00 2.57
2772 4533 4.635699 AATTTTCCGAACCTCCACTAGT 57.364 40.909 0.00 0.00 0.00 2.57
2773 4534 3.396260 TTTTCCGAACCTCCACTAGTG 57.604 47.619 16.34 16.34 0.00 2.74
2774 4535 0.606604 TTCCGAACCTCCACTAGTGC 59.393 55.000 17.86 1.61 0.00 4.40
2775 4536 0.541063 TCCGAACCTCCACTAGTGCA 60.541 55.000 17.86 0.81 0.00 4.57
2776 4537 0.108615 CCGAACCTCCACTAGTGCAG 60.109 60.000 17.86 12.43 0.00 4.41
2777 4538 0.888619 CGAACCTCCACTAGTGCAGA 59.111 55.000 15.73 8.40 0.00 4.26
2778 4539 1.272490 CGAACCTCCACTAGTGCAGAA 59.728 52.381 15.73 0.78 0.00 3.02
2779 4540 2.689646 GAACCTCCACTAGTGCAGAAC 58.310 52.381 15.73 2.66 0.00 3.01
2780 4541 0.977395 ACCTCCACTAGTGCAGAACC 59.023 55.000 15.73 0.00 0.00 3.62
2781 4542 0.108615 CCTCCACTAGTGCAGAACCG 60.109 60.000 15.73 1.07 0.00 4.44
2782 4543 0.108615 CTCCACTAGTGCAGAACCGG 60.109 60.000 17.86 0.00 0.00 5.28
2783 4544 1.079127 CCACTAGTGCAGAACCGGG 60.079 63.158 17.86 0.00 0.00 5.73
2784 4545 1.741770 CACTAGTGCAGAACCGGGC 60.742 63.158 10.54 0.00 0.00 6.13
2785 4546 2.214216 ACTAGTGCAGAACCGGGCA 61.214 57.895 6.32 1.81 37.77 5.36
2786 4547 1.003839 CTAGTGCAGAACCGGGCAA 60.004 57.895 6.32 0.00 42.45 4.52
2787 4548 0.392998 CTAGTGCAGAACCGGGCAAT 60.393 55.000 6.32 7.58 42.45 3.56
2788 4549 0.906066 TAGTGCAGAACCGGGCAATA 59.094 50.000 6.32 6.43 42.45 1.90
2789 4550 0.392998 AGTGCAGAACCGGGCAATAG 60.393 55.000 6.32 0.00 42.45 1.73
2790 4551 1.748879 TGCAGAACCGGGCAATAGC 60.749 57.895 6.32 2.35 37.03 2.97
2791 4552 1.748879 GCAGAACCGGGCAATAGCA 60.749 57.895 6.32 0.00 44.61 3.49
2792 4553 1.993369 GCAGAACCGGGCAATAGCAC 61.993 60.000 6.32 0.00 44.61 4.40
2793 4554 1.077716 AGAACCGGGCAATAGCACC 60.078 57.895 6.32 0.00 42.77 5.01
2794 4555 1.377987 GAACCGGGCAATAGCACCA 60.378 57.895 6.32 0.00 42.77 4.17
2795 4556 1.376609 GAACCGGGCAATAGCACCAG 61.377 60.000 6.32 0.00 42.77 4.00
2796 4557 2.137177 AACCGGGCAATAGCACCAGT 62.137 55.000 6.32 0.00 42.77 4.00
2797 4558 1.378514 CCGGGCAATAGCACCAGTT 60.379 57.895 0.00 0.00 42.77 3.16
2798 4559 1.376609 CCGGGCAATAGCACCAGTTC 61.377 60.000 0.00 0.00 42.77 3.01
2799 4560 1.705337 CGGGCAATAGCACCAGTTCG 61.705 60.000 0.00 0.00 42.77 3.95
2800 4561 0.676782 GGGCAATAGCACCAGTTCGT 60.677 55.000 0.00 0.00 44.61 3.85
2801 4562 1.406341 GGGCAATAGCACCAGTTCGTA 60.406 52.381 0.00 0.00 44.61 3.43
2802 4563 2.352388 GGCAATAGCACCAGTTCGTAA 58.648 47.619 0.00 0.00 44.61 3.18
2803 4564 2.351726 GGCAATAGCACCAGTTCGTAAG 59.648 50.000 0.00 0.00 44.61 2.34
2804 4565 2.351726 GCAATAGCACCAGTTCGTAAGG 59.648 50.000 0.00 0.00 41.58 2.69
2805 4566 3.596214 CAATAGCACCAGTTCGTAAGGT 58.404 45.455 0.00 0.00 35.65 3.50
2806 4567 3.521947 ATAGCACCAGTTCGTAAGGTC 57.478 47.619 0.00 0.00 32.15 3.85
2807 4568 0.320697 AGCACCAGTTCGTAAGGTCC 59.679 55.000 0.00 0.00 32.15 4.46
2808 4569 0.320697 GCACCAGTTCGTAAGGTCCT 59.679 55.000 0.00 0.00 32.15 3.85
2809 4570 1.270678 GCACCAGTTCGTAAGGTCCTT 60.271 52.381 9.62 9.62 32.15 3.36
2810 4571 2.809299 GCACCAGTTCGTAAGGTCCTTT 60.809 50.000 10.04 0.00 32.15 3.11
2811 4572 3.555586 GCACCAGTTCGTAAGGTCCTTTA 60.556 47.826 10.04 0.00 32.15 1.85
2812 4573 4.243270 CACCAGTTCGTAAGGTCCTTTAG 58.757 47.826 10.04 4.60 32.15 1.85
2813 4574 3.899980 ACCAGTTCGTAAGGTCCTTTAGT 59.100 43.478 10.04 0.00 38.47 2.24
2814 4575 4.243270 CCAGTTCGTAAGGTCCTTTAGTG 58.757 47.826 10.04 6.53 38.47 2.74
2815 4576 3.678548 CAGTTCGTAAGGTCCTTTAGTGC 59.321 47.826 10.04 0.00 38.47 4.40
2816 4577 2.998670 GTTCGTAAGGTCCTTTAGTGCC 59.001 50.000 10.04 0.00 38.47 5.01
2817 4578 1.203052 TCGTAAGGTCCTTTAGTGCCG 59.797 52.381 10.04 3.70 38.47 5.69
2818 4579 1.738030 CGTAAGGTCCTTTAGTGCCGG 60.738 57.143 10.04 0.00 0.00 6.13
2819 4580 1.277273 GTAAGGTCCTTTAGTGCCGGT 59.723 52.381 10.04 0.00 0.00 5.28
2820 4581 0.769247 AAGGTCCTTTAGTGCCGGTT 59.231 50.000 1.90 0.00 0.00 4.44
2821 4582 0.323957 AGGTCCTTTAGTGCCGGTTC 59.676 55.000 1.90 0.00 0.00 3.62
2822 4583 0.675837 GGTCCTTTAGTGCCGGTTCC 60.676 60.000 1.90 0.00 0.00 3.62
2823 4584 0.035739 GTCCTTTAGTGCCGGTTCCA 59.964 55.000 1.90 0.00 0.00 3.53
2824 4585 0.988832 TCCTTTAGTGCCGGTTCCAT 59.011 50.000 1.90 0.00 0.00 3.41
2825 4586 2.093341 GTCCTTTAGTGCCGGTTCCATA 60.093 50.000 1.90 0.00 0.00 2.74
2826 4587 2.572556 TCCTTTAGTGCCGGTTCCATAA 59.427 45.455 1.90 0.00 0.00 1.90
2827 4588 2.681344 CCTTTAGTGCCGGTTCCATAAC 59.319 50.000 1.90 0.00 34.66 1.89
2836 4597 2.406596 GGTTCCATAACCGGCACTAA 57.593 50.000 0.00 0.00 45.61 2.24
2837 4598 2.713877 GGTTCCATAACCGGCACTAAA 58.286 47.619 0.00 0.00 45.61 1.85
2838 4599 2.681344 GGTTCCATAACCGGCACTAAAG 59.319 50.000 0.00 0.00 45.61 1.85
2839 4600 3.340928 GTTCCATAACCGGCACTAAAGT 58.659 45.455 0.00 0.00 0.00 2.66
2840 4601 5.922080 GGTTCCATAACCGGCACTAAAGTG 61.922 50.000 0.00 5.73 45.61 3.16
2876 4637 2.524611 CCCCCTCCTTTAGTACCGG 58.475 63.158 0.00 0.00 0.00 5.28
2877 4638 0.325954 CCCCCTCCTTTAGTACCGGT 60.326 60.000 13.98 13.98 0.00 5.28
2878 4639 1.576577 CCCCTCCTTTAGTACCGGTT 58.423 55.000 15.04 0.00 0.00 4.44
2879 4640 1.483827 CCCCTCCTTTAGTACCGGTTC 59.516 57.143 15.04 8.12 0.00 3.62
2880 4641 2.181975 CCCTCCTTTAGTACCGGTTCA 58.818 52.381 15.04 0.00 0.00 3.18
2881 4642 2.167900 CCCTCCTTTAGTACCGGTTCAG 59.832 54.545 15.04 0.52 0.00 3.02
2882 4643 2.418334 CCTCCTTTAGTACCGGTTCAGC 60.418 54.545 15.04 0.59 0.00 4.26
2883 4644 2.232941 CTCCTTTAGTACCGGTTCAGCA 59.767 50.000 15.04 0.00 0.00 4.41
2884 4645 2.835764 TCCTTTAGTACCGGTTCAGCAT 59.164 45.455 15.04 0.00 0.00 3.79
2885 4646 2.936498 CCTTTAGTACCGGTTCAGCATG 59.064 50.000 15.04 0.00 37.54 4.06
2899 4660 3.996825 GCATGAACCGGTGCTAAAG 57.003 52.632 15.35 1.88 38.30 1.85
2900 4661 0.451783 GCATGAACCGGTGCTAAAGG 59.548 55.000 15.35 0.00 38.30 3.11
2901 4662 1.094785 CATGAACCGGTGCTAAAGGG 58.905 55.000 15.35 0.00 0.00 3.95
2902 4663 0.988832 ATGAACCGGTGCTAAAGGGA 59.011 50.000 15.35 0.00 0.00 4.20
2903 4664 0.766131 TGAACCGGTGCTAAAGGGAA 59.234 50.000 15.35 0.00 0.00 3.97
2904 4665 1.143277 TGAACCGGTGCTAAAGGGAAA 59.857 47.619 15.35 0.00 0.00 3.13
2905 4666 1.538512 GAACCGGTGCTAAAGGGAAAC 59.461 52.381 8.52 0.00 0.00 2.78
2917 4678 2.589442 GGAAACCACGTGGCACGA 60.589 61.111 42.65 0.00 46.05 4.35
2918 4679 2.604174 GGAAACCACGTGGCACGAG 61.604 63.158 42.65 34.61 46.05 4.18
2919 4680 3.236618 GAAACCACGTGGCACGAGC 62.237 63.158 42.65 20.13 46.05 5.03
2930 4691 4.463879 CACGAGCCAGCTCCAGGG 62.464 72.222 13.83 2.67 39.77 4.45
2943 4704 2.612115 CAGGGGCCTGGAGTCCTT 60.612 66.667 11.33 0.00 40.17 3.36
2944 4705 2.211279 AGGGGCCTGGAGTCCTTT 59.789 61.111 11.33 0.00 0.00 3.11
2945 4706 0.914417 CAGGGGCCTGGAGTCCTTTA 60.914 60.000 11.33 0.00 40.17 1.85
2946 4707 0.621862 AGGGGCCTGGAGTCCTTTAG 60.622 60.000 11.33 0.00 0.00 1.85
2947 4708 0.914902 GGGGCCTGGAGTCCTTTAGT 60.915 60.000 11.33 0.00 0.00 2.24
2948 4709 1.624391 GGGGCCTGGAGTCCTTTAGTA 60.624 57.143 11.33 0.00 0.00 1.82
2949 4710 1.485480 GGGCCTGGAGTCCTTTAGTAC 59.515 57.143 11.33 0.00 0.00 2.73
2950 4711 1.485480 GGCCTGGAGTCCTTTAGTACC 59.515 57.143 11.33 0.03 0.00 3.34
2951 4712 1.136500 GCCTGGAGTCCTTTAGTACCG 59.864 57.143 11.33 0.00 0.00 4.02
2952 4713 1.755380 CCTGGAGTCCTTTAGTACCGG 59.245 57.143 11.33 0.00 0.00 5.28
2953 4714 2.454538 CTGGAGTCCTTTAGTACCGGT 58.545 52.381 13.98 13.98 0.00 5.28
2954 4715 2.830321 CTGGAGTCCTTTAGTACCGGTT 59.170 50.000 15.04 0.00 0.00 4.44
2955 4716 2.564062 TGGAGTCCTTTAGTACCGGTTG 59.436 50.000 15.04 0.00 0.00 3.77
2956 4717 2.093816 GGAGTCCTTTAGTACCGGTTGG 60.094 54.545 15.04 6.26 42.84 3.77
2984 4745 5.677567 ACCAACCGGTACTATAAGATTTGG 58.322 41.667 8.00 10.01 46.71 3.28
2985 4746 5.061179 CCAACCGGTACTATAAGATTTGGG 58.939 45.833 8.00 0.00 0.00 4.12
2986 4747 4.968971 ACCGGTACTATAAGATTTGGGG 57.031 45.455 4.49 0.00 0.00 4.96
2987 4748 3.649502 ACCGGTACTATAAGATTTGGGGG 59.350 47.826 4.49 0.00 0.00 5.40
3010 4771 9.787435 GGGGGTTTTAGTTTTATGATTTCTTTT 57.213 29.630 0.00 0.00 0.00 2.27
3048 4809 9.372369 TGTGTTTCCATTTTAATTCTTTTTCGT 57.628 25.926 0.00 0.00 0.00 3.85
3052 4813 9.709600 TTTCCATTTTAATTCTTTTTCGTTTGC 57.290 25.926 0.00 0.00 0.00 3.68
3053 4814 8.655651 TCCATTTTAATTCTTTTTCGTTTGCT 57.344 26.923 0.00 0.00 0.00 3.91
3054 4815 8.547069 TCCATTTTAATTCTTTTTCGTTTGCTG 58.453 29.630 0.00 0.00 0.00 4.41
3055 4816 7.798052 CCATTTTAATTCTTTTTCGTTTGCTGG 59.202 33.333 0.00 0.00 0.00 4.85
3056 4817 7.835634 TTTTAATTCTTTTTCGTTTGCTGGT 57.164 28.000 0.00 0.00 0.00 4.00
3057 4818 8.928270 TTTTAATTCTTTTTCGTTTGCTGGTA 57.072 26.923 0.00 0.00 0.00 3.25
3058 4819 9.535878 TTTTAATTCTTTTTCGTTTGCTGGTAT 57.464 25.926 0.00 0.00 0.00 2.73
3059 4820 9.535878 TTTAATTCTTTTTCGTTTGCTGGTATT 57.464 25.926 0.00 0.00 0.00 1.89
3060 4821 9.535878 TTAATTCTTTTTCGTTTGCTGGTATTT 57.464 25.926 0.00 0.00 0.00 1.40
3061 4822 8.432110 AATTCTTTTTCGTTTGCTGGTATTTT 57.568 26.923 0.00 0.00 0.00 1.82
3062 4823 9.535878 AATTCTTTTTCGTTTGCTGGTATTTTA 57.464 25.926 0.00 0.00 0.00 1.52
3063 4824 7.917720 TCTTTTTCGTTTGCTGGTATTTTAC 57.082 32.000 0.00 0.00 0.00 2.01
3064 4825 6.633634 TCTTTTTCGTTTGCTGGTATTTTACG 59.366 34.615 0.00 0.00 0.00 3.18
3065 4826 5.670149 TTTCGTTTGCTGGTATTTTACGA 57.330 34.783 0.00 0.00 35.11 3.43
3066 4827 5.866335 TTCGTTTGCTGGTATTTTACGAT 57.134 34.783 0.00 0.00 36.58 3.73
3067 4828 6.964741 TTCGTTTGCTGGTATTTTACGATA 57.035 33.333 0.00 0.00 36.58 2.92
3068 4829 6.335176 TCGTTTGCTGGTATTTTACGATAC 57.665 37.500 0.00 0.00 32.39 2.24
3069 4830 6.101332 TCGTTTGCTGGTATTTTACGATACT 58.899 36.000 0.00 0.00 33.86 2.12
3070 4831 7.257003 TCGTTTGCTGGTATTTTACGATACTA 58.743 34.615 0.00 0.00 33.86 1.82
3071 4832 7.220683 TCGTTTGCTGGTATTTTACGATACTAC 59.779 37.037 0.00 0.00 33.86 2.73
3072 4833 7.009448 CGTTTGCTGGTATTTTACGATACTACA 59.991 37.037 0.00 0.00 33.86 2.74
3073 4834 7.760131 TTGCTGGTATTTTACGATACTACAC 57.240 36.000 0.00 0.00 33.86 2.90
3074 4835 6.865411 TGCTGGTATTTTACGATACTACACA 58.135 36.000 0.00 0.00 33.86 3.72
3075 4836 7.494211 TGCTGGTATTTTACGATACTACACAT 58.506 34.615 0.00 0.00 33.86 3.21
3076 4837 7.982919 TGCTGGTATTTTACGATACTACACATT 59.017 33.333 0.00 0.00 33.86 2.71
3077 4838 8.273557 GCTGGTATTTTACGATACTACACATTG 58.726 37.037 0.00 0.00 33.86 2.82
3078 4839 9.309516 CTGGTATTTTACGATACTACACATTGT 57.690 33.333 0.00 0.00 33.86 2.71
3083 4844 7.724128 TTTACGATACTACACATTGTACACG 57.276 36.000 0.00 0.00 0.00 4.49
3084 4845 5.300969 ACGATACTACACATTGTACACGT 57.699 39.130 0.00 0.00 33.71 4.49
3085 4846 5.702865 ACGATACTACACATTGTACACGTT 58.297 37.500 0.00 0.00 34.30 3.99
3086 4847 6.841119 ACGATACTACACATTGTACACGTTA 58.159 36.000 0.00 0.00 34.30 3.18
3087 4848 7.475015 ACGATACTACACATTGTACACGTTAT 58.525 34.615 0.00 0.00 34.30 1.89
3088 4849 7.430211 ACGATACTACACATTGTACACGTTATG 59.570 37.037 0.00 0.00 34.30 1.90
3089 4850 5.773239 ACTACACATTGTACACGTTATGC 57.227 39.130 0.00 0.00 0.00 3.14
3090 4851 5.231702 ACTACACATTGTACACGTTATGCA 58.768 37.500 0.00 0.00 0.00 3.96
3091 4852 5.872617 ACTACACATTGTACACGTTATGCAT 59.127 36.000 3.79 3.79 0.00 3.96
3092 4853 7.036829 ACTACACATTGTACACGTTATGCATA 58.963 34.615 1.16 1.16 0.00 3.14
3093 4854 6.918892 ACACATTGTACACGTTATGCATAT 57.081 33.333 7.36 0.00 0.00 1.78
3094 4855 9.187455 CTACACATTGTACACGTTATGCATATA 57.813 33.333 7.36 0.00 0.00 0.86
3095 4856 8.601845 ACACATTGTACACGTTATGCATATAT 57.398 30.769 7.36 0.00 0.00 0.86
3096 4857 9.699703 ACACATTGTACACGTTATGCATATATA 57.300 29.630 7.36 0.00 0.00 0.86
3139 4900 8.443953 AGAATTTCTAGTAGAACCAATCATGC 57.556 34.615 12.25 1.48 33.26 4.06
3140 4901 8.049117 AGAATTTCTAGTAGAACCAATCATGCA 58.951 33.333 12.25 0.00 33.26 3.96
3141 4902 8.757982 AATTTCTAGTAGAACCAATCATGCAT 57.242 30.769 12.25 0.00 33.26 3.96
3142 4903 9.851686 AATTTCTAGTAGAACCAATCATGCATA 57.148 29.630 12.25 0.00 33.26 3.14
3170 4931 9.803507 ATATATCATCAATGTCTCACAAACCAT 57.196 29.630 0.00 0.00 0.00 3.55
3171 4932 5.885230 TCATCAATGTCTCACAAACCATC 57.115 39.130 0.00 0.00 0.00 3.51
3172 4933 5.315348 TCATCAATGTCTCACAAACCATCA 58.685 37.500 0.00 0.00 0.00 3.07
3173 4934 5.947566 TCATCAATGTCTCACAAACCATCAT 59.052 36.000 0.00 0.00 0.00 2.45
3174 4935 7.111466 TCATCAATGTCTCACAAACCATCATA 58.889 34.615 0.00 0.00 0.00 2.15
3175 4936 7.776500 TCATCAATGTCTCACAAACCATCATAT 59.224 33.333 0.00 0.00 0.00 1.78
3176 4937 7.943079 TCAATGTCTCACAAACCATCATATT 57.057 32.000 0.00 0.00 0.00 1.28
3177 4938 9.631257 ATCAATGTCTCACAAACCATCATATTA 57.369 29.630 0.00 0.00 0.00 0.98
3178 4939 9.460019 TCAATGTCTCACAAACCATCATATTAA 57.540 29.630 0.00 0.00 0.00 1.40
3238 4999 7.703621 ACAATTTCTTCTACATATGCATGTTGC 59.296 33.333 10.16 0.00 42.98 4.17
3239 5000 5.756195 TTCTTCTACATATGCATGTTGCC 57.244 39.130 10.16 0.00 42.98 4.52
3240 5001 5.039920 TCTTCTACATATGCATGTTGCCT 57.960 39.130 10.16 0.00 42.98 4.75
3241 5002 5.439721 TCTTCTACATATGCATGTTGCCTT 58.560 37.500 10.16 0.00 42.98 4.35
3242 5003 5.528690 TCTTCTACATATGCATGTTGCCTTC 59.471 40.000 10.16 0.00 42.98 3.46
3243 5004 3.809279 TCTACATATGCATGTTGCCTTCG 59.191 43.478 10.16 0.00 42.98 3.79
3244 5005 1.677576 ACATATGCATGTTGCCTTCGG 59.322 47.619 10.16 0.00 42.98 4.30
3245 5006 1.948834 CATATGCATGTTGCCTTCGGA 59.051 47.619 10.16 0.00 44.23 4.55
3246 5007 1.667236 TATGCATGTTGCCTTCGGAG 58.333 50.000 10.16 0.00 44.23 4.63
3247 5008 1.660560 ATGCATGTTGCCTTCGGAGC 61.661 55.000 0.00 0.00 44.23 4.70
3248 5009 3.056313 GCATGTTGCCTTCGGAGCC 62.056 63.158 0.00 0.00 37.42 4.70
3249 5010 1.675310 CATGTTGCCTTCGGAGCCA 60.675 57.895 0.00 0.00 0.00 4.75
3250 5011 1.377725 ATGTTGCCTTCGGAGCCAG 60.378 57.895 0.00 0.00 0.00 4.85
3251 5012 2.032681 GTTGCCTTCGGAGCCAGT 59.967 61.111 0.00 0.00 0.00 4.00
3252 5013 2.032528 TTGCCTTCGGAGCCAGTG 59.967 61.111 0.00 0.00 0.00 3.66
3253 5014 3.551496 TTGCCTTCGGAGCCAGTGG 62.551 63.158 4.20 4.20 0.00 4.00
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
87 1770 1.872653 GCGAGGTCGTTGTTCCTCTTT 60.873 52.381 9.11 0.00 45.57 2.52
237 1926 1.064134 CTCGTCGTCATCATCGGCA 59.936 57.895 0.00 0.00 32.96 5.69
238 1927 0.930742 GTCTCGTCGTCATCATCGGC 60.931 60.000 0.00 0.00 0.00 5.54
239 1928 0.317103 GGTCTCGTCGTCATCATCGG 60.317 60.000 0.00 0.00 0.00 4.18
240 1929 0.377203 TGGTCTCGTCGTCATCATCG 59.623 55.000 0.00 0.00 0.00 3.84
241 1930 1.268794 CCTGGTCTCGTCGTCATCATC 60.269 57.143 0.00 0.00 0.00 2.92
242 1931 0.741326 CCTGGTCTCGTCGTCATCAT 59.259 55.000 0.00 0.00 0.00 2.45
294 1989 3.458163 GAGGCATCGTCGGTGGGA 61.458 66.667 7.76 0.00 0.00 4.37
357 2055 1.447838 GCTTGGAGGAATCGACGCA 60.448 57.895 0.00 0.00 0.00 5.24
361 2062 2.900273 CGGGCTTGGAGGAATCGA 59.100 61.111 0.00 0.00 0.00 3.59
372 2073 2.735857 GTCGTTGTACGCGGGCTT 60.736 61.111 12.47 0.00 42.21 4.35
454 2155 1.197910 GACATGTAGTAGTTCGGCGC 58.802 55.000 0.00 0.00 0.00 6.53
469 2170 6.757897 TCAGCGATCAAAATAAAAGGACAT 57.242 33.333 0.00 0.00 0.00 3.06
537 2239 5.418840 ACATCATTCCCGCTTAAAGAAACAT 59.581 36.000 0.00 0.00 0.00 2.71
547 2249 2.817258 TCGAAAAACATCATTCCCGCTT 59.183 40.909 0.00 0.00 0.00 4.68
619 2324 1.694696 GCTAGATCGGACCTGGGATTT 59.305 52.381 0.00 0.00 0.00 2.17
622 2327 1.528542 CGCTAGATCGGACCTGGGA 60.529 63.158 0.00 0.00 0.00 4.37
710 2418 3.916359 ATCTCAGTCGACTCAGACCTA 57.084 47.619 22.13 0.00 41.83 3.08
711 2419 2.799126 ATCTCAGTCGACTCAGACCT 57.201 50.000 22.13 3.79 41.83 3.85
713 2421 6.556212 TGATTAAATCTCAGTCGACTCAGAC 58.444 40.000 22.13 8.36 41.23 3.51
714 2422 6.759497 TGATTAAATCTCAGTCGACTCAGA 57.241 37.500 21.94 21.94 0.00 3.27
715 2423 7.032580 ACTTGATTAAATCTCAGTCGACTCAG 58.967 38.462 16.96 13.70 0.00 3.35
716 2424 6.925211 ACTTGATTAAATCTCAGTCGACTCA 58.075 36.000 16.96 0.38 0.00 3.41
717 2425 7.254852 AGACTTGATTAAATCTCAGTCGACTC 58.745 38.462 16.96 0.79 41.37 3.36
718 2426 7.164230 AGACTTGATTAAATCTCAGTCGACT 57.836 36.000 13.58 13.58 41.37 4.18
719 2427 7.820044 AAGACTTGATTAAATCTCAGTCGAC 57.180 36.000 7.70 7.70 41.37 4.20
729 2437 9.653287 TGTCACTCGATTAAGACTTGATTAAAT 57.347 29.630 0.00 0.00 32.41 1.40
730 2438 9.653287 ATGTCACTCGATTAAGACTTGATTAAA 57.347 29.630 0.00 0.00 32.41 1.52
733 2441 9.088512 GTTATGTCACTCGATTAAGACTTGATT 57.911 33.333 0.00 0.00 32.41 2.57
734 2442 8.251026 TGTTATGTCACTCGATTAAGACTTGAT 58.749 33.333 0.00 0.00 32.41 2.57
735 2443 7.599171 TGTTATGTCACTCGATTAAGACTTGA 58.401 34.615 0.00 0.00 32.41 3.02
736 2444 7.812309 TGTTATGTCACTCGATTAAGACTTG 57.188 36.000 0.00 0.00 32.41 3.16
737 2445 8.251026 TCATGTTATGTCACTCGATTAAGACTT 58.749 33.333 0.00 0.00 32.41 3.01
738 2446 7.772166 TCATGTTATGTCACTCGATTAAGACT 58.228 34.615 0.00 0.00 32.41 3.24
739 2447 7.987268 TCATGTTATGTCACTCGATTAAGAC 57.013 36.000 0.00 0.00 0.00 3.01
740 2448 8.996024 TTTCATGTTATGTCACTCGATTAAGA 57.004 30.769 0.00 0.00 0.00 2.10
741 2449 8.331022 CCTTTCATGTTATGTCACTCGATTAAG 58.669 37.037 0.00 0.00 0.00 1.85
742 2450 7.279981 CCCTTTCATGTTATGTCACTCGATTAA 59.720 37.037 0.00 0.00 0.00 1.40
743 2451 6.761242 CCCTTTCATGTTATGTCACTCGATTA 59.239 38.462 0.00 0.00 0.00 1.75
744 2452 5.586243 CCCTTTCATGTTATGTCACTCGATT 59.414 40.000 0.00 0.00 0.00 3.34
745 2453 5.104941 TCCCTTTCATGTTATGTCACTCGAT 60.105 40.000 0.00 0.00 0.00 3.59
746 2454 4.221924 TCCCTTTCATGTTATGTCACTCGA 59.778 41.667 0.00 0.00 0.00 4.04
747 2455 4.503910 TCCCTTTCATGTTATGTCACTCG 58.496 43.478 0.00 0.00 0.00 4.18
748 2456 6.817765 TTTCCCTTTCATGTTATGTCACTC 57.182 37.500 0.00 0.00 0.00 3.51
749 2457 7.595819 TTTTTCCCTTTCATGTTATGTCACT 57.404 32.000 0.00 0.00 0.00 3.41
775 2483 9.560860 TGGTATCCTATAATCAGGTATGTGAAT 57.439 33.333 0.00 0.00 36.99 2.57
776 2484 8.966155 TGGTATCCTATAATCAGGTATGTGAA 57.034 34.615 0.00 0.00 36.99 3.18
777 2485 9.201989 GATGGTATCCTATAATCAGGTATGTGA 57.798 37.037 0.00 0.00 36.99 3.58
778 2486 8.138074 CGATGGTATCCTATAATCAGGTATGTG 58.862 40.741 0.00 0.00 36.99 3.21
779 2487 8.059461 TCGATGGTATCCTATAATCAGGTATGT 58.941 37.037 0.00 0.00 36.99 2.29
780 2488 8.353684 GTCGATGGTATCCTATAATCAGGTATG 58.646 40.741 0.00 0.00 36.99 2.39
781 2489 7.228906 CGTCGATGGTATCCTATAATCAGGTAT 59.771 40.741 0.00 0.00 36.99 2.73
782 2490 6.541278 CGTCGATGGTATCCTATAATCAGGTA 59.459 42.308 0.00 0.00 36.99 3.08
783 2491 5.357314 CGTCGATGGTATCCTATAATCAGGT 59.643 44.000 0.00 0.00 36.99 4.00
784 2492 5.221067 CCGTCGATGGTATCCTATAATCAGG 60.221 48.000 15.98 0.00 37.00 3.86
785 2493 5.221067 CCCGTCGATGGTATCCTATAATCAG 60.221 48.000 22.05 0.00 0.00 2.90
786 2494 4.643334 CCCGTCGATGGTATCCTATAATCA 59.357 45.833 22.05 0.00 0.00 2.57
787 2495 4.643784 ACCCGTCGATGGTATCCTATAATC 59.356 45.833 22.05 0.00 33.26 1.75
788 2496 4.607239 ACCCGTCGATGGTATCCTATAAT 58.393 43.478 22.05 0.00 33.26 1.28
789 2497 4.012374 GACCCGTCGATGGTATCCTATAA 58.988 47.826 22.05 0.00 35.85 0.98
790 2498 3.265221 AGACCCGTCGATGGTATCCTATA 59.735 47.826 22.05 0.00 35.85 1.31
791 2499 2.041350 AGACCCGTCGATGGTATCCTAT 59.959 50.000 22.05 1.87 35.85 2.57
792 2500 1.422781 AGACCCGTCGATGGTATCCTA 59.577 52.381 22.05 0.00 35.85 2.94
793 2501 0.185416 AGACCCGTCGATGGTATCCT 59.815 55.000 22.05 10.12 35.85 3.24
794 2502 0.597072 GAGACCCGTCGATGGTATCC 59.403 60.000 22.05 8.10 38.00 2.59
795 2503 1.315690 TGAGACCCGTCGATGGTATC 58.684 55.000 22.05 20.43 42.98 2.24
796 2504 1.771565 TTGAGACCCGTCGATGGTAT 58.228 50.000 22.05 12.98 35.85 2.73
797 2505 1.407618 CATTGAGACCCGTCGATGGTA 59.592 52.381 22.05 1.69 35.43 3.25
798 2506 0.175760 CATTGAGACCCGTCGATGGT 59.824 55.000 22.05 15.58 35.43 3.55
799 2507 2.977700 CATTGAGACCCGTCGATGG 58.022 57.895 17.27 17.27 35.43 3.51
800 2508 0.459899 TCCATTGAGACCCGTCGATG 59.540 55.000 0.00 0.00 37.88 3.84
801 2509 0.460311 GTCCATTGAGACCCGTCGAT 59.540 55.000 0.00 0.00 34.09 3.59
802 2510 0.611062 AGTCCATTGAGACCCGTCGA 60.611 55.000 0.00 0.00 37.49 4.20
807 2515 4.828072 AAGTCTTAGTCCATTGAGACCC 57.172 45.455 0.00 0.00 39.39 4.46
817 2525 7.674471 ATTCAGTTTTGCTAAGTCTTAGTCC 57.326 36.000 18.72 6.02 35.66 3.85
844 2552 9.683069 GCTGTAGGCGTTATAGTTAACTTATTA 57.317 33.333 14.49 0.00 36.37 0.98
845 2553 8.585189 GCTGTAGGCGTTATAGTTAACTTATT 57.415 34.615 14.49 2.19 36.37 1.40
901 2611 8.081633 TGCGAAGTGAAAAGTTTTTGATATCAT 58.918 29.630 6.17 0.00 0.00 2.45
910 2620 4.338118 TCAGGATGCGAAGTGAAAAGTTTT 59.662 37.500 0.00 0.00 34.76 2.43
917 2627 5.452078 AAAATTTCAGGATGCGAAGTGAA 57.548 34.783 0.00 0.00 34.76 3.18
920 2630 8.087750 TGAAAATAAAATTTCAGGATGCGAAGT 58.912 29.630 0.00 0.00 42.68 3.01
922 2632 8.824159 TTGAAAATAAAATTTCAGGATGCGAA 57.176 26.923 0.00 0.00 46.63 4.70
925 2635 7.119553 TGGCTTGAAAATAAAATTTCAGGATGC 59.880 33.333 13.81 10.99 46.63 3.91
928 2638 7.443879 GGTTGGCTTGAAAATAAAATTTCAGGA 59.556 33.333 13.81 0.00 46.63 3.86
956 2666 3.129287 CACTGGAGTATTTGGTCAATGGC 59.871 47.826 0.00 0.00 0.00 4.40
989 2699 2.358195 GGCATTTGTACTGGAGGGGATT 60.358 50.000 0.00 0.00 0.00 3.01
1000 2710 2.110352 CGGACCGGGGCATTTGTAC 61.110 63.158 6.32 0.00 0.00 2.90
1053 2766 2.516930 CGGGCCATTGTAGCAGGG 60.517 66.667 4.39 0.00 0.00 4.45
1095 2808 1.457831 GACGGCCAGGAGGGATAGT 60.458 63.158 2.24 0.00 40.01 2.12
1197 2910 2.282040 ACCTCAGCAACAGCAGCC 60.282 61.111 0.00 0.00 0.00 4.85
1248 2961 4.457496 AGCATGCCCTCGTCCACG 62.457 66.667 15.66 0.00 41.45 4.94
1362 3075 4.379243 ACACAAGCCTCGCCCGAG 62.379 66.667 10.56 10.56 41.63 4.63
1363 3076 4.373116 GACACAAGCCTCGCCCGA 62.373 66.667 0.00 0.00 0.00 5.14
1424 3137 1.277557 CACTAGGCTCTTGCTGTTCCT 59.722 52.381 0.00 0.00 39.59 3.36
1429 3142 1.023513 GGCACACTAGGCTCTTGCTG 61.024 60.000 0.00 0.00 39.59 4.41
1440 3153 2.283604 TCCAGCTCCGGCACACTA 60.284 61.111 0.00 0.00 41.70 2.74
1503 3216 1.471684 CCATGAAACAGCTTCTCTGCC 59.528 52.381 0.00 0.00 46.76 4.85
1527 3240 1.807573 GTTCGCTGCCTCTTCCTCG 60.808 63.158 0.00 0.00 0.00 4.63
1545 3261 1.811266 CATCTCCACCTTCCACGCG 60.811 63.158 3.53 3.53 0.00 6.01
1598 3314 2.438434 GGTGAAGATGGTGGCGGG 60.438 66.667 0.00 0.00 0.00 6.13
1613 3329 0.814010 GTCTTGCTCGTGTTGGTGGT 60.814 55.000 0.00 0.00 0.00 4.16
1620 3336 2.915659 TCCCCGTCTTGCTCGTGT 60.916 61.111 0.00 0.00 0.00 4.49
1629 3345 4.361971 TCGTGCTCCTCCCCGTCT 62.362 66.667 0.00 0.00 0.00 4.18
1667 3383 0.445436 GTTCATGCTCGTGCCTTCAG 59.555 55.000 7.05 0.00 38.71 3.02
1675 3391 0.670546 CCGAACAGGTTCATGCTCGT 60.671 55.000 12.22 0.00 37.14 4.18
1722 3438 2.842462 TCCTGCTCGTGGTGGTGT 60.842 61.111 0.00 0.00 0.00 4.16
1757 3473 1.228245 TCCTTGTTCTGCTGGTGGC 60.228 57.895 0.00 0.00 42.22 5.01
1768 3484 2.032071 CGGGCCTTCGTCCTTGTT 59.968 61.111 0.84 0.00 0.00 2.83
2000 3719 0.039798 GCCGGCGATCGATACTTGTA 60.040 55.000 21.57 0.00 42.43 2.41
2001 3720 1.299926 GCCGGCGATCGATACTTGT 60.300 57.895 21.57 0.00 42.43 3.16
2002 3721 2.022129 GGCCGGCGATCGATACTTG 61.022 63.158 22.54 1.19 42.43 3.16
2003 3722 2.338984 GGCCGGCGATCGATACTT 59.661 61.111 22.54 0.00 42.43 2.24
2004 3723 4.039357 CGGCCGGCGATCGATACT 62.039 66.667 22.54 0.00 42.43 2.12
2077 3796 2.738521 GCACTCCACGTCACGCAT 60.739 61.111 0.00 0.00 0.00 4.73
2161 3888 5.650266 CACAGCAGTACATATACCCCAAAAA 59.350 40.000 0.00 0.00 30.88 1.94
2162 3889 5.189928 CACAGCAGTACATATACCCCAAAA 58.810 41.667 0.00 0.00 30.88 2.44
2163 3890 4.226394 ACACAGCAGTACATATACCCCAAA 59.774 41.667 0.00 0.00 30.88 3.28
2164 3891 3.778075 ACACAGCAGTACATATACCCCAA 59.222 43.478 0.00 0.00 30.88 4.12
2165 3892 3.380393 ACACAGCAGTACATATACCCCA 58.620 45.455 0.00 0.00 30.88 4.96
2166 3893 4.417426 AACACAGCAGTACATATACCCC 57.583 45.455 0.00 0.00 30.88 4.95
2167 3894 6.158023 ACTAACACAGCAGTACATATACCC 57.842 41.667 0.00 0.00 30.88 3.69
2168 3895 9.028185 GTAAACTAACACAGCAGTACATATACC 57.972 37.037 0.00 0.00 30.88 2.73
2169 3896 9.798994 AGTAAACTAACACAGCAGTACATATAC 57.201 33.333 0.00 0.00 0.00 1.47
2322 4067 2.437281 AGAGATCGATGAACATGCCCTT 59.563 45.455 0.54 0.00 0.00 3.95
2323 4068 2.045524 AGAGATCGATGAACATGCCCT 58.954 47.619 0.54 0.00 0.00 5.19
2327 4072 5.481200 AAAAGCAGAGATCGATGAACATG 57.519 39.130 0.54 0.00 0.00 3.21
2336 4081 1.565305 CGAGGGAAAAGCAGAGATCG 58.435 55.000 0.00 0.00 0.00 3.69
2345 4090 0.240945 ATGCAAACGCGAGGGAAAAG 59.759 50.000 15.93 0.00 0.00 2.27
2349 4094 1.573829 GAACATGCAAACGCGAGGGA 61.574 55.000 15.93 2.55 0.00 4.20
2353 4098 0.237235 GAAGGAACATGCAAACGCGA 59.763 50.000 15.93 0.00 0.00 5.87
2354 4099 0.238289 AGAAGGAACATGCAAACGCG 59.762 50.000 3.53 3.53 0.00 6.01
2355 4100 1.001378 ACAGAAGGAACATGCAAACGC 60.001 47.619 0.00 0.00 0.00 4.84
2356 4101 3.354089 AACAGAAGGAACATGCAAACG 57.646 42.857 0.00 0.00 0.00 3.60
2357 4102 4.037446 TGGTAACAGAAGGAACATGCAAAC 59.963 41.667 0.00 0.00 46.17 2.93
2402 4159 8.830201 TGTTGAAATTTTAGCTATGTGCAATT 57.170 26.923 0.00 0.00 45.94 2.32
2403 4160 8.830201 TTGTTGAAATTTTAGCTATGTGCAAT 57.170 26.923 0.00 0.00 45.94 3.56
2423 4180 5.171337 CAGGAGTTTCGTCGAAATTTTGTTG 59.829 40.000 22.28 12.60 33.97 3.33
2434 4191 3.546617 CGATATCTCAGGAGTTTCGTCG 58.453 50.000 0.34 0.00 0.00 5.12
2444 4201 0.387878 GCGCTCACCGATATCTCAGG 60.388 60.000 0.00 0.00 40.02 3.86
2459 4216 7.023197 ACTTAATTACAAATATTTCGGCGCT 57.977 32.000 7.64 0.00 0.00 5.92
2478 4235 6.892658 TCTGGCTCTAAATTGCAAACTTAA 57.107 33.333 1.71 0.00 0.00 1.85
2479 4236 7.466746 AATCTGGCTCTAAATTGCAAACTTA 57.533 32.000 1.71 3.70 0.00 2.24
2480 4237 5.990120 ATCTGGCTCTAAATTGCAAACTT 57.010 34.783 1.71 2.54 0.00 2.66
2481 4238 5.990120 AATCTGGCTCTAAATTGCAAACT 57.010 34.783 1.71 0.00 0.00 2.66
2494 4251 9.723447 GCTCTAAAATTAGTTTAAATCTGGCTC 57.277 33.333 0.00 0.00 31.22 4.70
2588 4345 2.558359 GACCTCACCCAAATTTCAGTGG 59.442 50.000 14.22 2.71 34.44 4.00
2589 4347 3.221771 TGACCTCACCCAAATTTCAGTG 58.778 45.455 9.80 9.80 0.00 3.66
2590 4348 3.593442 TGACCTCACCCAAATTTCAGT 57.407 42.857 0.00 0.00 0.00 3.41
2598 4356 5.600484 ACATAACAATTTTGACCTCACCCAA 59.400 36.000 0.00 0.00 0.00 4.12
2599 4357 5.144100 ACATAACAATTTTGACCTCACCCA 58.856 37.500 0.00 0.00 0.00 4.51
2600 4358 5.722021 ACATAACAATTTTGACCTCACCC 57.278 39.130 0.00 0.00 0.00 4.61
2602 4360 6.799925 CGGTAACATAACAATTTTGACCTCAC 59.200 38.462 0.00 0.00 0.00 3.51
2648 4407 1.308998 ACAGTTTGAGTTCCCAAGCG 58.691 50.000 0.00 0.00 33.36 4.68
2666 4425 2.959507 AGAAACACCAAGGTTGCAAC 57.040 45.000 21.59 21.59 0.00 4.17
2670 4429 7.703058 AGGAATATAAGAAACACCAAGGTTG 57.297 36.000 0.00 0.00 0.00 3.77
2671 4430 8.721133 AAAGGAATATAAGAAACACCAAGGTT 57.279 30.769 0.00 0.00 0.00 3.50
2674 4433 8.087750 TGCAAAAGGAATATAAGAAACACCAAG 58.912 33.333 0.00 0.00 0.00 3.61
2689 4450 2.896685 TCGTTTCCCATGCAAAAGGAAT 59.103 40.909 14.17 0.00 39.36 3.01
2700 4461 1.937191 AAGGGCAAATCGTTTCCCAT 58.063 45.000 5.93 0.00 41.22 4.00
2701 4462 1.616374 GAAAGGGCAAATCGTTTCCCA 59.384 47.619 5.93 0.00 41.22 4.37
2702 4463 1.616374 TGAAAGGGCAAATCGTTTCCC 59.384 47.619 0.00 0.00 39.42 3.97
2706 4467 4.559153 CTGAAATGAAAGGGCAAATCGTT 58.441 39.130 0.00 0.00 0.00 3.85
2726 4487 7.581213 TTATAAGGAAAATGTATGTGCCCTG 57.419 36.000 0.00 0.00 0.00 4.45
2741 4502 7.670559 TGGAGGTTCGGAAAATTTTATAAGGAA 59.329 33.333 2.75 1.21 0.00 3.36
2742 4503 7.121611 GTGGAGGTTCGGAAAATTTTATAAGGA 59.878 37.037 2.75 0.00 0.00 3.36
2743 4504 7.122204 AGTGGAGGTTCGGAAAATTTTATAAGG 59.878 37.037 2.75 0.00 0.00 2.69
2744 4505 8.051901 AGTGGAGGTTCGGAAAATTTTATAAG 57.948 34.615 2.75 0.00 0.00 1.73
2745 4506 9.169592 CTAGTGGAGGTTCGGAAAATTTTATAA 57.830 33.333 2.75 0.00 0.00 0.98
2746 4507 8.323567 ACTAGTGGAGGTTCGGAAAATTTTATA 58.676 33.333 2.75 0.00 0.00 0.98
2747 4508 7.120726 CACTAGTGGAGGTTCGGAAAATTTTAT 59.879 37.037 15.49 0.00 0.00 1.40
2748 4509 6.428771 CACTAGTGGAGGTTCGGAAAATTTTA 59.571 38.462 15.49 0.00 0.00 1.52
2749 4510 5.240844 CACTAGTGGAGGTTCGGAAAATTTT 59.759 40.000 15.49 2.28 0.00 1.82
2750 4511 4.760204 CACTAGTGGAGGTTCGGAAAATTT 59.240 41.667 15.49 0.00 0.00 1.82
2751 4512 4.324267 CACTAGTGGAGGTTCGGAAAATT 58.676 43.478 15.49 0.00 0.00 1.82
2752 4513 3.868754 GCACTAGTGGAGGTTCGGAAAAT 60.869 47.826 23.95 0.00 0.00 1.82
2753 4514 2.549349 GCACTAGTGGAGGTTCGGAAAA 60.549 50.000 23.95 0.00 0.00 2.29
2754 4515 1.001633 GCACTAGTGGAGGTTCGGAAA 59.998 52.381 23.95 0.00 0.00 3.13
2755 4516 0.606604 GCACTAGTGGAGGTTCGGAA 59.393 55.000 23.95 0.00 0.00 4.30
2756 4517 0.541063 TGCACTAGTGGAGGTTCGGA 60.541 55.000 23.95 0.00 0.00 4.55
2757 4518 0.108615 CTGCACTAGTGGAGGTTCGG 60.109 60.000 30.81 12.40 44.02 4.30
2758 4519 3.425578 CTGCACTAGTGGAGGTTCG 57.574 57.895 30.81 10.85 44.02 3.95
2764 4525 1.541310 CCCGGTTCTGCACTAGTGGA 61.541 60.000 23.95 20.48 0.00 4.02
2765 4526 1.079127 CCCGGTTCTGCACTAGTGG 60.079 63.158 23.95 8.81 0.00 4.00
2766 4527 1.741770 GCCCGGTTCTGCACTAGTG 60.742 63.158 18.93 18.93 0.00 2.74
2767 4528 1.764571 TTGCCCGGTTCTGCACTAGT 61.765 55.000 0.00 0.00 37.18 2.57
2768 4529 0.392998 ATTGCCCGGTTCTGCACTAG 60.393 55.000 0.00 0.00 37.18 2.57
2769 4530 0.906066 TATTGCCCGGTTCTGCACTA 59.094 50.000 0.00 0.00 37.18 2.74
2770 4531 0.392998 CTATTGCCCGGTTCTGCACT 60.393 55.000 0.00 0.00 37.18 4.40
2771 4532 1.993369 GCTATTGCCCGGTTCTGCAC 61.993 60.000 0.00 0.00 37.18 4.57
2772 4533 1.748879 GCTATTGCCCGGTTCTGCA 60.749 57.895 0.00 0.00 35.27 4.41
2773 4534 1.748879 TGCTATTGCCCGGTTCTGC 60.749 57.895 0.00 0.00 38.71 4.26
2774 4535 1.376609 GGTGCTATTGCCCGGTTCTG 61.377 60.000 0.00 0.00 38.71 3.02
2775 4536 1.077716 GGTGCTATTGCCCGGTTCT 60.078 57.895 0.00 0.00 38.71 3.01
2776 4537 1.376609 CTGGTGCTATTGCCCGGTTC 61.377 60.000 0.00 0.00 38.71 3.62
2777 4538 1.378514 CTGGTGCTATTGCCCGGTT 60.379 57.895 0.00 0.00 38.71 4.44
2778 4539 2.137177 AACTGGTGCTATTGCCCGGT 62.137 55.000 12.83 12.83 44.96 5.28
2779 4540 1.376609 GAACTGGTGCTATTGCCCGG 61.377 60.000 11.82 11.82 39.90 5.73
2780 4541 1.705337 CGAACTGGTGCTATTGCCCG 61.705 60.000 0.00 0.00 38.71 6.13
2781 4542 0.676782 ACGAACTGGTGCTATTGCCC 60.677 55.000 0.00 0.00 38.71 5.36
2782 4543 2.018542 TACGAACTGGTGCTATTGCC 57.981 50.000 0.00 0.00 38.71 4.52
2783 4544 2.351726 CCTTACGAACTGGTGCTATTGC 59.648 50.000 0.00 0.00 40.20 3.56
2784 4545 3.596214 ACCTTACGAACTGGTGCTATTG 58.404 45.455 0.00 0.00 32.16 1.90
2785 4546 3.369157 GGACCTTACGAACTGGTGCTATT 60.369 47.826 0.00 0.00 38.81 1.73
2786 4547 2.167900 GGACCTTACGAACTGGTGCTAT 59.832 50.000 0.00 0.00 38.81 2.97
2787 4548 1.547372 GGACCTTACGAACTGGTGCTA 59.453 52.381 0.00 0.00 38.81 3.49
2788 4549 0.320697 GGACCTTACGAACTGGTGCT 59.679 55.000 0.00 0.00 38.81 4.40
2789 4550 0.320697 AGGACCTTACGAACTGGTGC 59.679 55.000 0.00 0.00 41.56 5.01
2790 4551 2.833631 AAGGACCTTACGAACTGGTG 57.166 50.000 4.44 0.00 33.74 4.17
2791 4552 3.899980 ACTAAAGGACCTTACGAACTGGT 59.100 43.478 7.30 0.00 36.70 4.00
2792 4553 4.243270 CACTAAAGGACCTTACGAACTGG 58.757 47.826 7.30 0.00 0.00 4.00
2793 4554 3.678548 GCACTAAAGGACCTTACGAACTG 59.321 47.826 7.30 0.00 0.00 3.16
2794 4555 3.306571 GGCACTAAAGGACCTTACGAACT 60.307 47.826 7.30 0.00 0.00 3.01
2795 4556 2.998670 GGCACTAAAGGACCTTACGAAC 59.001 50.000 7.30 0.00 0.00 3.95
2796 4557 2.353011 CGGCACTAAAGGACCTTACGAA 60.353 50.000 7.30 0.00 0.00 3.85
2797 4558 1.203052 CGGCACTAAAGGACCTTACGA 59.797 52.381 7.30 0.00 0.00 3.43
2798 4559 1.636988 CGGCACTAAAGGACCTTACG 58.363 55.000 7.30 4.18 0.00 3.18
2799 4560 1.277273 ACCGGCACTAAAGGACCTTAC 59.723 52.381 7.30 0.00 0.00 2.34
2800 4561 1.648116 ACCGGCACTAAAGGACCTTA 58.352 50.000 7.30 0.00 0.00 2.69
2801 4562 0.769247 AACCGGCACTAAAGGACCTT 59.231 50.000 0.00 0.00 0.00 3.50
2802 4563 0.323957 GAACCGGCACTAAAGGACCT 59.676 55.000 0.00 0.00 0.00 3.85
2803 4564 0.675837 GGAACCGGCACTAAAGGACC 60.676 60.000 0.00 0.00 0.00 4.46
2804 4565 0.035739 TGGAACCGGCACTAAAGGAC 59.964 55.000 0.00 0.00 0.00 3.85
2805 4566 0.988832 ATGGAACCGGCACTAAAGGA 59.011 50.000 0.00 0.00 0.00 3.36
2806 4567 2.681344 GTTATGGAACCGGCACTAAAGG 59.319 50.000 0.00 0.00 0.00 3.11
2807 4568 2.681344 GGTTATGGAACCGGCACTAAAG 59.319 50.000 0.00 0.00 45.73 1.85
2808 4569 2.713877 GGTTATGGAACCGGCACTAAA 58.286 47.619 0.00 0.00 45.73 1.85
2809 4570 2.406596 GGTTATGGAACCGGCACTAA 57.593 50.000 0.00 0.00 45.73 2.24
2817 4578 5.922080 CACTTTAGTGCCGGTTATGGAACC 61.922 50.000 1.90 0.00 44.16 3.62
2818 4579 3.126343 CACTTTAGTGCCGGTTATGGAAC 59.874 47.826 1.90 0.00 39.39 3.62
2819 4580 3.340034 CACTTTAGTGCCGGTTATGGAA 58.660 45.455 1.90 0.00 39.39 3.53
2820 4581 2.980568 CACTTTAGTGCCGGTTATGGA 58.019 47.619 1.90 0.00 39.39 3.41
2858 4619 0.325954 ACCGGTACTAAAGGAGGGGG 60.326 60.000 4.49 0.00 0.00 5.40
2859 4620 1.483827 GAACCGGTACTAAAGGAGGGG 59.516 57.143 8.00 0.00 0.00 4.79
2860 4621 2.167900 CTGAACCGGTACTAAAGGAGGG 59.832 54.545 8.00 0.00 0.00 4.30
2861 4622 2.418334 GCTGAACCGGTACTAAAGGAGG 60.418 54.545 8.00 0.00 0.00 4.30
2862 4623 2.232941 TGCTGAACCGGTACTAAAGGAG 59.767 50.000 8.00 0.00 0.00 3.69
2863 4624 2.250031 TGCTGAACCGGTACTAAAGGA 58.750 47.619 8.00 0.00 0.00 3.36
2864 4625 2.754946 TGCTGAACCGGTACTAAAGG 57.245 50.000 8.00 0.00 0.00 3.11
2865 4626 3.857052 TCATGCTGAACCGGTACTAAAG 58.143 45.455 8.00 2.29 0.00 1.85
2866 4627 3.965379 TCATGCTGAACCGGTACTAAA 57.035 42.857 8.00 0.00 0.00 1.85
2867 4628 3.965379 TTCATGCTGAACCGGTACTAA 57.035 42.857 8.00 0.00 30.26 2.24
2877 4638 3.667087 GCACCGGTTCATGCTGAA 58.333 55.556 2.97 0.00 38.84 3.02
2881 4642 0.451783 CCTTTAGCACCGGTTCATGC 59.548 55.000 2.97 5.25 42.39 4.06
2882 4643 1.094785 CCCTTTAGCACCGGTTCATG 58.905 55.000 2.97 0.00 0.00 3.07
2883 4644 0.988832 TCCCTTTAGCACCGGTTCAT 59.011 50.000 2.97 0.00 0.00 2.57
2884 4645 0.766131 TTCCCTTTAGCACCGGTTCA 59.234 50.000 2.97 0.00 0.00 3.18
2885 4646 1.538512 GTTTCCCTTTAGCACCGGTTC 59.461 52.381 2.97 0.00 0.00 3.62
2886 4647 1.612676 GTTTCCCTTTAGCACCGGTT 58.387 50.000 2.97 0.00 0.00 4.44
2887 4648 0.251033 GGTTTCCCTTTAGCACCGGT 60.251 55.000 0.00 0.00 0.00 5.28
2888 4649 0.250989 TGGTTTCCCTTTAGCACCGG 60.251 55.000 0.00 0.00 0.00 5.28
2889 4650 0.879090 GTGGTTTCCCTTTAGCACCG 59.121 55.000 0.00 0.00 36.92 4.94
2890 4651 0.879090 CGTGGTTTCCCTTTAGCACC 59.121 55.000 0.00 0.00 39.05 5.01
2891 4652 1.265905 CACGTGGTTTCCCTTTAGCAC 59.734 52.381 7.95 0.00 38.91 4.40
2892 4653 1.600023 CACGTGGTTTCCCTTTAGCA 58.400 50.000 7.95 0.00 0.00 3.49
2893 4654 0.879090 CCACGTGGTTTCCCTTTAGC 59.121 55.000 26.95 0.00 0.00 3.09
2894 4655 0.879090 GCCACGTGGTTTCCCTTTAG 59.121 55.000 33.92 6.07 37.57 1.85
2895 4656 0.183014 TGCCACGTGGTTTCCCTTTA 59.817 50.000 33.92 8.23 37.57 1.85
2896 4657 1.076632 TGCCACGTGGTTTCCCTTT 60.077 52.632 33.92 0.00 37.57 3.11
2897 4658 1.826487 GTGCCACGTGGTTTCCCTT 60.826 57.895 33.92 0.00 37.57 3.95
2898 4659 2.203294 GTGCCACGTGGTTTCCCT 60.203 61.111 33.92 0.00 37.57 4.20
2899 4660 3.656045 CGTGCCACGTGGTTTCCC 61.656 66.667 33.92 18.34 36.74 3.97
2900 4661 2.589442 TCGTGCCACGTGGTTTCC 60.589 61.111 33.92 18.72 43.14 3.13
2901 4662 2.935955 CTCGTGCCACGTGGTTTC 59.064 61.111 33.92 22.22 43.14 2.78
2902 4663 3.276846 GCTCGTGCCACGTGGTTT 61.277 61.111 33.92 0.00 43.14 3.27
2913 4674 4.463879 CCCTGGAGCTGGCTCGTG 62.464 72.222 15.15 10.41 43.59 4.35
2926 4687 0.914417 TAAAGGACTCCAGGCCCCTG 60.914 60.000 7.36 7.36 43.26 4.45
2927 4688 0.621862 CTAAAGGACTCCAGGCCCCT 60.622 60.000 0.00 0.00 0.00 4.79
2928 4689 0.914902 ACTAAAGGACTCCAGGCCCC 60.915 60.000 0.00 0.00 0.00 5.80
2929 4690 1.485480 GTACTAAAGGACTCCAGGCCC 59.515 57.143 0.00 0.00 0.00 5.80
2930 4691 1.485480 GGTACTAAAGGACTCCAGGCC 59.515 57.143 0.00 0.00 0.00 5.19
2931 4692 1.136500 CGGTACTAAAGGACTCCAGGC 59.864 57.143 0.00 0.00 0.00 4.85
2932 4693 1.755380 CCGGTACTAAAGGACTCCAGG 59.245 57.143 0.00 0.00 0.00 4.45
2933 4694 2.454538 ACCGGTACTAAAGGACTCCAG 58.545 52.381 4.49 0.00 0.00 3.86
2934 4695 2.564062 CAACCGGTACTAAAGGACTCCA 59.436 50.000 8.00 0.00 0.00 3.86
2935 4696 2.093816 CCAACCGGTACTAAAGGACTCC 60.094 54.545 8.00 0.00 0.00 3.85
2936 4697 2.564504 ACCAACCGGTACTAAAGGACTC 59.435 50.000 8.00 0.00 46.71 3.36
2937 4698 2.613129 ACCAACCGGTACTAAAGGACT 58.387 47.619 8.00 0.00 46.71 3.85
2962 4723 5.061179 CCCAAATCTTATAGTACCGGTTGG 58.939 45.833 15.04 9.73 42.84 3.77
2963 4724 5.061179 CCCCAAATCTTATAGTACCGGTTG 58.939 45.833 15.04 0.00 0.00 3.77
2964 4725 4.103627 CCCCCAAATCTTATAGTACCGGTT 59.896 45.833 15.04 0.00 0.00 4.44
2965 4726 3.649502 CCCCCAAATCTTATAGTACCGGT 59.350 47.826 13.98 13.98 0.00 5.28
2966 4727 4.281898 CCCCCAAATCTTATAGTACCGG 57.718 50.000 0.00 0.00 0.00 5.28
2984 4745 9.787435 AAAAGAAATCATAAAACTAAAACCCCC 57.213 29.630 0.00 0.00 0.00 5.40
3026 4787 9.709600 GCAAACGAAAAAGAATTAAAATGGAAA 57.290 25.926 0.00 0.00 0.00 3.13
3027 4788 9.103861 AGCAAACGAAAAAGAATTAAAATGGAA 57.896 25.926 0.00 0.00 0.00 3.53
3028 4789 8.547069 CAGCAAACGAAAAAGAATTAAAATGGA 58.453 29.630 0.00 0.00 0.00 3.41
3029 4790 7.798052 CCAGCAAACGAAAAAGAATTAAAATGG 59.202 33.333 0.00 0.00 0.00 3.16
3030 4791 8.334632 ACCAGCAAACGAAAAAGAATTAAAATG 58.665 29.630 0.00 0.00 0.00 2.32
3031 4792 8.432110 ACCAGCAAACGAAAAAGAATTAAAAT 57.568 26.923 0.00 0.00 0.00 1.82
3032 4793 7.835634 ACCAGCAAACGAAAAAGAATTAAAA 57.164 28.000 0.00 0.00 0.00 1.52
3033 4794 9.535878 AATACCAGCAAACGAAAAAGAATTAAA 57.464 25.926 0.00 0.00 0.00 1.52
3034 4795 9.535878 AAATACCAGCAAACGAAAAAGAATTAA 57.464 25.926 0.00 0.00 0.00 1.40
3035 4796 9.535878 AAAATACCAGCAAACGAAAAAGAATTA 57.464 25.926 0.00 0.00 0.00 1.40
3036 4797 8.432110 AAAATACCAGCAAACGAAAAAGAATT 57.568 26.923 0.00 0.00 0.00 2.17
3037 4798 8.974408 GTAAAATACCAGCAAACGAAAAAGAAT 58.026 29.630 0.00 0.00 0.00 2.40
3038 4799 7.166142 CGTAAAATACCAGCAAACGAAAAAGAA 59.834 33.333 0.00 0.00 0.00 2.52
3039 4800 6.633634 CGTAAAATACCAGCAAACGAAAAAGA 59.366 34.615 0.00 0.00 0.00 2.52
3040 4801 6.633634 TCGTAAAATACCAGCAAACGAAAAAG 59.366 34.615 0.00 0.00 35.23 2.27
3041 4802 6.493116 TCGTAAAATACCAGCAAACGAAAAA 58.507 32.000 0.00 0.00 35.23 1.94
3042 4803 6.057627 TCGTAAAATACCAGCAAACGAAAA 57.942 33.333 0.00 0.00 35.23 2.29
3043 4804 5.670149 TCGTAAAATACCAGCAAACGAAA 57.330 34.783 0.00 0.00 35.23 3.46
3044 4805 5.866335 ATCGTAAAATACCAGCAAACGAA 57.134 34.783 0.00 0.00 40.71 3.85
3045 4806 6.101332 AGTATCGTAAAATACCAGCAAACGA 58.899 36.000 0.00 0.00 41.45 3.85
3046 4807 6.340537 AGTATCGTAAAATACCAGCAAACG 57.659 37.500 0.00 0.00 33.42 3.60
3047 4808 8.112449 GTGTAGTATCGTAAAATACCAGCAAAC 58.888 37.037 0.00 0.00 33.42 2.93
3048 4809 7.818446 TGTGTAGTATCGTAAAATACCAGCAAA 59.182 33.333 0.00 0.00 33.42 3.68
3049 4810 7.321908 TGTGTAGTATCGTAAAATACCAGCAA 58.678 34.615 0.00 0.00 33.42 3.91
3050 4811 6.865411 TGTGTAGTATCGTAAAATACCAGCA 58.135 36.000 0.00 0.00 33.42 4.41
3051 4812 7.941795 ATGTGTAGTATCGTAAAATACCAGC 57.058 36.000 0.00 0.00 33.42 4.85
3052 4813 9.309516 ACAATGTGTAGTATCGTAAAATACCAG 57.690 33.333 0.00 0.00 33.42 4.00
3057 4818 8.800972 CGTGTACAATGTGTAGTATCGTAAAAT 58.199 33.333 0.00 0.00 32.84 1.82
3058 4819 7.807433 ACGTGTACAATGTGTAGTATCGTAAAA 59.193 33.333 0.00 0.00 32.84 1.52
3059 4820 7.304735 ACGTGTACAATGTGTAGTATCGTAAA 58.695 34.615 0.00 0.00 32.84 2.01
3060 4821 6.841119 ACGTGTACAATGTGTAGTATCGTAA 58.159 36.000 0.00 0.00 32.84 3.18
3061 4822 6.421377 ACGTGTACAATGTGTAGTATCGTA 57.579 37.500 0.00 0.00 32.84 3.43
3062 4823 5.300969 ACGTGTACAATGTGTAGTATCGT 57.699 39.130 0.00 0.00 32.84 3.73
3063 4824 7.564538 GCATAACGTGTACAATGTGTAGTATCG 60.565 40.741 0.00 0.00 32.84 2.92
3064 4825 7.221259 TGCATAACGTGTACAATGTGTAGTATC 59.779 37.037 0.00 0.00 32.84 2.24
3065 4826 7.036829 TGCATAACGTGTACAATGTGTAGTAT 58.963 34.615 0.00 0.00 32.84 2.12
3066 4827 6.388278 TGCATAACGTGTACAATGTGTAGTA 58.612 36.000 0.00 0.00 32.84 1.82
3067 4828 5.231702 TGCATAACGTGTACAATGTGTAGT 58.768 37.500 0.00 0.00 32.84 2.73
3068 4829 5.771602 TGCATAACGTGTACAATGTGTAG 57.228 39.130 0.00 0.00 32.84 2.74
3069 4830 9.699703 ATATATGCATAACGTGTACAATGTGTA 57.300 29.630 11.13 0.00 0.00 2.90
3070 4831 6.918892 ATATGCATAACGTGTACAATGTGT 57.081 33.333 11.13 0.00 0.00 3.72
3113 4874 9.547753 GCATGATTGGTTCTACTAGAAATTCTA 57.452 33.333 2.44 2.44 35.75 2.10
3114 4875 8.049117 TGCATGATTGGTTCTACTAGAAATTCT 58.951 33.333 0.00 0.00 35.75 2.40
3115 4876 8.213518 TGCATGATTGGTTCTACTAGAAATTC 57.786 34.615 0.00 0.00 35.75 2.17
3116 4877 8.757982 ATGCATGATTGGTTCTACTAGAAATT 57.242 30.769 0.00 0.00 35.75 1.82
3144 4905 9.803507 ATGGTTTGTGAGACATTGATGATATAT 57.196 29.630 0.00 0.00 0.00 0.86
3145 4906 9.276590 GATGGTTTGTGAGACATTGATGATATA 57.723 33.333 0.00 0.00 0.00 0.86
3146 4907 7.776500 TGATGGTTTGTGAGACATTGATGATAT 59.224 33.333 0.00 0.00 0.00 1.63
3147 4908 7.111466 TGATGGTTTGTGAGACATTGATGATA 58.889 34.615 0.00 0.00 0.00 2.15
3148 4909 5.947566 TGATGGTTTGTGAGACATTGATGAT 59.052 36.000 0.00 0.00 0.00 2.45
3149 4910 5.315348 TGATGGTTTGTGAGACATTGATGA 58.685 37.500 0.00 0.00 0.00 2.92
3150 4911 5.632244 TGATGGTTTGTGAGACATTGATG 57.368 39.130 0.00 0.00 0.00 3.07
3151 4912 8.529424 AATATGATGGTTTGTGAGACATTGAT 57.471 30.769 0.00 0.00 0.00 2.57
3152 4913 7.943079 AATATGATGGTTTGTGAGACATTGA 57.057 32.000 0.00 0.00 0.00 2.57
3212 4973 7.703621 GCAACATGCATATGTAGAAGAAATTGT 59.296 33.333 0.00 0.00 46.54 2.71
3213 4974 7.168637 GGCAACATGCATATGTAGAAGAAATTG 59.831 37.037 0.00 0.00 46.54 2.32
3214 4975 7.069085 AGGCAACATGCATATGTAGAAGAAATT 59.931 33.333 0.00 0.00 46.54 1.82
3215 4976 6.548622 AGGCAACATGCATATGTAGAAGAAAT 59.451 34.615 0.00 0.00 46.54 2.17
3216 4977 5.887598 AGGCAACATGCATATGTAGAAGAAA 59.112 36.000 0.00 0.00 46.54 2.52
3217 4978 5.439721 AGGCAACATGCATATGTAGAAGAA 58.560 37.500 0.00 0.00 46.54 2.52
3218 4979 5.039920 AGGCAACATGCATATGTAGAAGA 57.960 39.130 0.00 0.00 46.54 2.87
3219 4980 5.559608 CGAAGGCAACATGCATATGTAGAAG 60.560 44.000 0.00 0.00 46.54 2.85
3220 4981 4.273235 CGAAGGCAACATGCATATGTAGAA 59.727 41.667 0.00 0.00 46.54 2.10
3221 4982 3.809279 CGAAGGCAACATGCATATGTAGA 59.191 43.478 0.00 0.00 46.54 2.59
3222 4983 4.137849 CGAAGGCAACATGCATATGTAG 57.862 45.455 0.00 0.00 46.54 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.