>input_sequence_56253
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---------------------------------------------------------------------GTACAAATGCC
CCGGTCCGCTCCCGTCTGACTCCACCT---GCACAGACCTTCTGTCCCTGCTACAATGGCCCGTCTCGCCACCCTCGCCG
TGCTCCTACTATCCCTCCTGGCCGTCGCTAGCTGCCGCGTCCTTGAGACCATCTCCGACGACCAGGGTTCATCCAACTCC
GTCCTCCTCACCCAAGATGATCAGGCGGAGGCTGCTGTTGCTGAGGTGACCCTTCCGGCTTTGCCCACCACGGCCGTTGC
CGTGGACGAGGGCATGCTCCGGCTCCCCTCCCACCGCCGCCCCTGCCACCTCCACCGTCACCTCTGGTGGACGCGCCACC
ACGGCCTCTCCCACCACCGGGGCGCGTTCTCCGGCTCGGGCGAGGCTTGTGTCCATCCGGCCGTCGACGTCGTCGTGCCC
ACCGAGCTTGCCCGCGAGGAACAGCAAGAGCCTAGTGTGCCGGAGCTGGAGGCGGTCGCGGAGCCTGACCCCGACTCACG
CCCGGACACCGACGCGGCAGAGAAGCTGTTTCATGGCGAC---GAGGAAGAGGCAGCGAACGCGTGGAAGGTGGAGATGC
TGAGGAGGTTCCGCCACGGCATCCGCTTTCACCCCCGCCACCATCTTCACCACCAACACGAGCAAGACGGGGAGGAGCAC
GACGACCACGAGCAGGACAAGGCTGAAGGCACGAGCATGAACCTGTTCGGGCGCTTCCACCACCGCCACCATCTTCGACA
CCACCACGAGCAGGACGCGGAGGAGGAGGACGGCCACCAGCAGAACAAGGACGAAGGCCCGAAGATGAAGCTGTTCCGAC
GTTTCCACCACCACCACGCGCACGACAGCGACAACGAGGTCGACGAGGTGGAAGAACTGGCTAGGAAGCTGAGCGAGGCG
ATCATGAGAAGGAGCTTCGGCCATGGCGGCCGCCGCC---ACCACCACCACCACAACGGCGCGGAGGGCGGGGTGAAGAA
GTGGTTCAAGGGCCTCATGAACCGATTCTAGACGTACCTACAAGTATCGATCGCCGGCCGGCGGCTGGTTGATTTGGTCG
TTTAATTACTTTGGTTAATCTGTTCGCTGCACTGTATGCGTGACGTGGAGTGCTCTGCCATTTGGTACC--------TTT
TTTGCTTCCTATTCCACATTACATTACCACTTCGGTTTATGTACTTTTTTTTGGGGTATATGTACTGCTGTGTTAGTTTA
CTCGTGAGGGTTGGGAGATTGTACGAGCAGCAATTTTATGTG------TTTTTCTGCAGATTAAATA-------------
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-------------------------------------------------------
>chr3B_1_TraesCS3B01G498500
GTCGGCGACTGGAAGACTTTTTCC--------------------------------------------------------
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--------------------------CGCCGTCAAACTCGACTTGCTCCGCGCCAACGCCGCCGCGAAACTCCAAGCTCA
AGATGCCAAAAAGAGGAACAACGACCTCGCCTTCTTGATGGACGGCGCTGACATGCTCCAGAGCGGCAACGAGAATCTCA
AGGCGTGGTTCTTGGCCCAGCGCGGTCTCATCCTGAATCAGATACCGGTGACGCCGACGCC------GACGCCCAACCAG
GCGGCTGCCGATGATGACGA------CGAGACCAGGGACGACGATGTCTCCGCCTCCGCGACGCCCAGTCCCACCG---A
CGATGCCTCCGCCGCGCCCAACAGCACAGAAGAGGCGCCGAGCAGCCCGGAAGCT---GCGTCGATTCCTCCAAGCCCGC
GTACAACGACGACTACGCCGCCGGAGGTTGAGCTCGACGCTTGATGTACTCCTTCCGCGCCCTTCCTTTTTTGTGCGCCG
AACTACTACATGTCCTTTTATTTTGATCGCTGAACTGTGACACCGACTCGACGAACTATTGCGATGATCGC-GGTTTGAT
GTTTCTTTAAGCGGGAATGATGTT-TTTC-GAATATGGAGCACCTTAGGGGGCGGCGCCTGGGCGCGTGACTGGGAAAAA
A-CAAATCCCA-GGTCCGATCTAGCGTCGGCTCGCCCCCAGACCGG--CTTTTTTCGGCGCCCTGGAAGGCCGAACGGCT
GGAGATGCTCTTAGGGCTAGGTCTGAGTCGACTGAGATTTAATCAAGTCTTAATCGAGTGACATAACATGAAAGGGAAAA
AAATTCACATACCTGATTATAGGATACCATCGACGGGTCTCAATGGACTAAGACTTAGCAAAACTGAATAATAATAAGTT
AACTATAACGCCTACAGCTAATTAAGGGCT--AACCTTGTTAGGTGAGCCATGATATCAAAAACTTTTCACTTCGCATCC
TGAAATTTTATTTTCAAGCCAACCGGCCATTGACCAAATACTCCAGTGCGATTCCCCTAATCCCCTCCAGTACAAATGCC
CCGGTCCGCTCCCGTCTGACTCCACCT---GCACAGACCTTCTGTCCCTGCTACAATGGCCCGTCTCGCCACCCTCGCCG
TGCTCCTACTATCCCTCCTGGCCGTCGCTAGCTGCCGCGTCCTTGAGACCATCTCCGACGACCAGGGTTCATCCAACTCC
GTCCTCCTCACCCAAGATGATCAGGCGGAGGCTGCTGTTGCTGAGGTGACCCTTCCGGCTTTGCCCACCACGGCCGTTGC
CGTGGACGAGGGCATGCTCCGGCTCCCCTCCCACCGCCGCCCCTGCCACCTCCACCGTCACCTCTGGTGGACGCGCCACC
ACGGCCTCTCCCACCACCGGGGCGCGTTCTCCGGCTCGGGCGAGGCTTGTGTCCATCCGGCCGTCGACGTCGTCGTGCCC
ACCGAGCTTGCCCGCGAGGAACAGCAAGAGCCTAGTGTGCCGGAGCTGGAGGCGGTCGCGGAGCCTGACCCCGACTCACG
CCCGGACACCGACGCGGCAGAGAAGCTGTTTCATGGCGAC---GAGGAAGAGGCAGCGAACGCGTGGAAGGTGGAGATGC
TGAGGAGGTTCCGCCACGGCATCCGCTTTCACCCCCGCCACCATCTTCACCACCAACACGAGCAAGACGGGGAGGAGCAC
GACGACCACGAGCAGGACAAGGCTGAAGGCACGAGCATGAACCTGTTCGGGCGCTTCCACCACCGCCACCATCTTCGACA
CCACCACGAGCAGGACGCGGAGGAGGAGGACGGCCACCAGCAGAACAAGGACGAAGGCCCGAAGATGAAGCTGTTCCGAC
GTTTCCACCACCACCACGCGCACGACAGCGACAACGAGGTCGACGAGGTGGAAGAACTGGCTAGGAAGCTGAGCGAGGCG
ATCATGAGAAGGAGCTTCGGCCATGGCGGCCGCCGCC---ACCACCACCACCACAACGGCGCGGAGGGCGGGGTGAAGAA
GTGGTTCAAGGGCCTCATGAACCGATTCTAGACGTACCTACAAGTATCGATCGCCGGCCGGCGGCTGGTTGATTTGGTCG
TTTAATTACTTTGGTTAATCTGTTCGCTGCACTGTATGCGTGACGTGGAGTGCTCTGCCATTTGGTACC--------TTT
TTTGCTTCCTATTCCACATTACATTACCACTTCGGTTTATGTACTTTTTTTTGGGGTATATGTACTGCTGTGTTAGTTTA
CTCGTGAGGGTTGGGAGATTGTACGAGCAGCAATTTTATGTG------TTTTTCTGCAGATTAAATAATAAATTTATCTT
GTTATGCATG------------TATATGTGTAATATTATTGTTATCCCGTGGGGTTCGTATTAAAAAAGGGCATGTTCAT
CGATCTCTGCTTTTCCCTCGCG-----------TTTGCATGTTCCTTCTGTTACCAGTTATCAATTGTAGTG-TTTAGAA
TTGCACATAGCTAAAATTTCAACAAAATTTCGACGAAACTCCTGAGATATCGGTGAGCGCCGAAATATTTGTAATTAAGT
TTGCAATTTAGAGCCAGATTTAAACTAATTTTAGAGCAAATTAAATCAGGTCAATTTTTTTGAATAATCCGATGAAGTTG
ATGGATCAAAATCCAGAATTTTTCC-CACTGAAATTTGGGTGAGGT-CAAAATTGTTATGTTACCGAAATATTAAACCAT
CGTTGCCGCTTGGGAACTCAAACTGTTGCAACCTTGGTGTT--TCTTATATTCCTTTTGCATGGGAAACGATTTGCCCTT
TCATTTCAGGGCACATACATTTTCCTTATAAAATTTTCCGAACCTCCACTAGTGCAGAACCGGGCAATAGCACCAGTTCG
TAAGGTCCTTTAGTGCCGGTTCCATAACCGGCACTAAAGTGTGGGCACTAAAGCCCCCCCCCCTCCTTTAGTACCGGTTC
AGCATGAACCGGTGCTAAAGGGAAACCACGTGGCACGAGCCAGCTCCAGGGGCCTGGAGTCCTTTAGTACCGGTTGGTAA
AACCAACCGGTACTATAAGATTTGGGGGGTTTTAGTTTTATGATTTCTTTTTCATTTAATTTTGTGTTTCCATTTTAATT
CTTTTTCGTTTGCTGGTATTTTACGATACTACACATTGTACACGTTATGCATATATATATATATATATATAAATAGAATT
TCTAGTAGAACCAATCATGCATATATATATCATCAATGTCTCACAAACCATCATATTAATTAATTCACACATACACACAT
GTATAGCTATATACAATTTCTTCTACATATGCATGTTGCCTTCGGAGCCAGTGGC
>chr2D_1
GTCGGCGACTGGAAGACTTTTTCCCGCCGTTTCCTCCCGCTCCCCCCTCTCTTCTCCATTCCTCCCGCCAAACCCGGCCT
CCACCCTGCCGTTCCGCCCGCCATGCCGCCGAAGAAGTACGTGATGCCGCGCGCCGCGACGGATCCCGCCGCCGCCGCCC
CGCCGAAGCAAAGGAAGCCTAGGGCTCCGCTGTCCAAGCCCCCCGGCATGACCAACGCCGAGTGGAAGGCGGATGTGGAG
CGCCGGGAGGCCGTCACCGCCAACAGGCGCAACAGGGCCAAGAAGGCCAGGGAGAAAGCGGCGCACGCTGCGGCGGCGAC
GGCTGCGGAGCATGCGGCGGCCGAACAAGCAGAGGCGGCGCGCGCGGCAATGATGAACCCACCCGGGCATCCGTACGCAG
CCTGGAGCCAGCAAAGCGTCGGCTCTCCGGCCGGGTTCTCATCGTCGCCGCACCCATGGAGCACGCCGTCGCTGGGCTAT
GCTGACGGGGACGCTCATGGCGGCTTCAACCCCAACATCACCTTCCCCCATGGGCGGCCCGTCCAGCGCACGCCCTCGCC
CGCGTTCACCGGCGTGCAGTACCCGCCGTACACGTACTCGCCGTCGGACTACGCAGCCTCACCGACGCCGCCTCTCCGCC
GCGGCCTCTACTCACAAGCCTCTTCCTCGTCGCATCTCGGTGACGCCGACACGACGGAGGCCGACATGGAGGACATCATC
ACAGCTGGCTCGACTGCGGCTGCCGCTTCCCCCGGGTTCGCTACGCAGGACCTCGCCGACGTGGACGACGAGCTCGACTA
CGGCGAGGAAGAGCCGGAGGAGGAGGAGGAAGAGGAGGAGGAGCCGGCGCTGACGAGGAAAAGCAAGAAGAAGAAGAAGA
AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGCCAAGTCCGGCGAGCCACGC
ATCAAATGAGCGTCCAAGGAAGAAGAGTGCCTCGCCGAAGCGTGGAAGGTCGTCTACCTCGACCCGGTCAAAGGCACGAA
TCAGAGCATCGAGACGTATTGGGACCGCATCAAGGCCGAGTTCGACGAGCGGAAGCTCGTCGACCCCTACTTCAAAGGCA
TGCACATGAAGCGGGGGTCGAAGGCGATGGCAAACCATTGGTCGCTCATTCAAACGGCGTGCAACAAATGGCATGGGATC
GTCGAGGAGGTCGCGGCTCGCCCGGAGAGCGGCACCAGCGTCAAGGATCAGGTATCGCACGCCGTCCATGTTGCTACCTT
TCGCCGCACGCGCGCTCTTTCGCCTTTGTGTGCGCCCTGGGCGTGCCCTGGCGCGTGCTCTGGTGCCGACTAACGTTCTT
TCTCGGCGCAGCTGCTGCGCATGTTCGCCATGTTCCGCGATGACAACTGCGACGCAGACTTCAAGTACCTCCACGTCTTC
AAGCGGATCGACAAGTGCGAGAAATGGGCGGCCGTCCGACGCACCCTTGCCTAGGCCAAAGAGACGTACAAGTCGGACGC
GCCGACAGCGGGCCCGGCCGATGGACGCCCGGGCGGCAACAAAGGTGCCAAGAAGGCGAAATACGCCGAGACGGCTACCA
CGTGCGTGCAGGAGTCCATCGAGCACTGCATCACCGACGCCAAAATCAGGGCTGCCGAGCGAGAGGAGAAAACAGAGGCG
AGGTGGGCTGTTTTGATGACGGACAGCGCCGTCAAACTCGACTTGCTCCGCGCCAACACCGCCGCGGAACTCAAAGCTCA
AGACGCCAAGAAGAGGAACAACGACCTTGCCTTCTTGATGGGCAGCGCTGACATGCTCCAGAGCGGCGACGAGAAGCTCA
AGGCGTGGTTCTTGGCCGAGCGCGGCCTCATCCTGAACCAGATACCGGCGACGCCGCCGCC------GCCGCCCAGCCCG
GCTGC------TGATGACGA------TGAGACCAGGACCGACGATGTCTCCGCCTCCGCGACGCCCAGCCCCACCG---A
CGATGCCTCCGCCGCGCCCAGCAGCACAGAAGACGCGCCGAACAGCTCGGAAGCC---GCGCCGATTCCTCCCAGCCAGC
GTACGCCGACGACTACGCCACCGGAGGTTGAACTCGACGCTTGATGTTCTCCTTCTGCGCCCTTCCTTTTTTGTACGCTG
AACTATTGCGTGTCCTGTTATTTTGATCGCCGAACTGTGGCACCGAGTCGCAGAACTATTGCGATGATCGCCGGTTTGTT
GTTTCTTTGAGCGGGAATGATGTT-TTTC-GAATATGGAGCGCCTTGGGGGGGGGGGGCTGGGCGCGCGGCTGGGGAAAA
A-TGAACCCCAGGGGCCGATCTAGCGCCGGCTCGCCCCCAGGCTGG--TCTTTTTCGGCGCCCTGGGAGGCCGAACGGCT
GGAGATGCTCTTAG------------------------------------------------------------------
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-------------------------------------------------------
>chr5B_2
-TCGGCGACTGGAAGACTTTTTCCCGCCGTTTCCTCCTCCCCCCCTCA-TCTTCTCCATTCCTCCCGCCAAACCCCACCT
CCATCCTGCCGTTCCGCTCGCCATGCCGTTGAAGAAATACGTGATGCCGCGCGCCGCAACGGATTCCGCCGTCGCCGCCC
CGCCGAAGCAAAGGAAGTCTAGGGCTCCGCTGTCCAAGCCCCCCGGCATGACCAACACCGAGTGGAAGGCGGACGTGGAG
CGCCGGGAGACCATCAACGCCGACAGATACAACAGGGCCATGAAGGCCCGGGACAAAG---------------------C
GGCTGCGGAGCGCGCGGCGGCTGAATAAGCGGAGGCGGCGCGCGCGGTGATGATGAATCCACCCGGGCATCCGTGCGTGG
CCTGGAGCCAGCAAAGCATCGGCTCTCCAGCCAGGTTCTGGTCGTCGCCGCACCCATGGAGCACGCCATCACCGAGCTAT
GCCGACGGGGACGCTCATGGCGGCTTCAACCCCAACATCACCTTCCCCCATGGGCGCCCCGCCCAACTCACGCCCTCACC
AGCGTTCGCCGGCGTGCAGTACCCGCCGTACACGTACTCGCCGCCGAGGAAATAGGTGATGCCGCGCGG-----------
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-----------------------------------CGCGACGACAACAGCGACGCAGACTTCAAGTACCTCCACGTCTTC
AAGCGGATCGACAAGTGCGAGAAATGGGCGGCCGTCCGGCGCACCCTCGCCAAGGCCAAAGAGACGTACAAGCCGGACGC
GCCGACAGCGGGCGCGGCCGATGGACGCCCGGACGGCAACAAAGGTGCCAAGAAGGCGAAATACATCGAGACAGCTGCCG
CGCGTGTGCAAGAGTCCATCGAGCACTGCATTGCCGATGCCAAAACCAGGGCCGCCGAGCGGGAGGAGAAAACAGAGGCG
AGGTGGGCTGTTTTGATGACGAACAATGTCGTCAAACTCGACTTGCTCCGCGCCAACGCCACTGCGAAACTCAAAGCTCA
AGACGCCAAGAAGAGAAACAACGACCTCGCCTTCTTGAT-GGCGGCGCTGACATGCTCCAGAGCGGCAACGAGAAGCTCA
AGGCGTGGTTCTTGGCCGAGCGCGGCCTCATCCTGAACCAGATACCGACGACGGCGACGCC------GCCGCCCAGCCCG
GTGGC------TGATGACGA------CGAGACCAGGGCCGACGATGTCTCTGACTCCGCGACGCCCAGCCCCACCG---A
CGATGCCTACGCCGCGCACAGCAGCGCAGAGGACGTGCAGAACAGCCCGGAAGCCGCGGCGCCGATTCCTCCCAGCCCCC
GTACGCCGACGACTATGCCGCCGGAGGTTTACCTCGACGCTTGATGTACTCCTTTTGCGCCCTTCCTTTTTTGTACGCCG
AACTACTGCGTGTCCTTTCATTTTGATCGCCGAACTGTGGCACCGAGTCGCCGAACTATTGCGATGATCGCCGGTTTGTT
GTTTCTTTGAGCGGGAATGATGTT-TTTC-AAATATGGAACGCCTTGGAGGGCGGCGCCTGGGCGCGTGGCTGGGAAAAA
AACGAACCCCAGGGCCCGAACTAGCGCCGGCTCGCCCTCAGTCGGCTA--TTTTTCGGCGCCCTCGGGGGCCGAACAGCT
GGAGATGCTCTTATGG----------------------------------------------------------------
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>chr3B_25
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--------------------------CGCCATCAAACTTGACTTGCTCCGCGCCAACGCCGCCACGAAACTCAAAGCTCA
AGATGCCAAGAAGAGGAACAACGACCTCACCTTCTTGATGGGCGGTGCTGACATGCTCCAGAGCGGCAACGAGAAGCTCA
AGGCGTGGTTCTTGGCCGAGTGCGGCCTCATCCTGAACCAGATACCGACGACGCCGATGCC------GCCACCCAGCCCG
ACGGC------TGATGATGA------TGAGACCAGGGCCGATGATGTCTCCGCCTCCGCGACACCCAGCCCCACCG---A
CGATGCCCACGCCACGCCCAGCAGCACAGAAGACGCGCCGAACAGCCCAGAAGCA---GCGCCGATTCCTCCCAGCCCAC
ATACGCTGATGACTACGCCGCTGGAGGTTTAACTCGACGCTTGATGTACTCCTTCCGCGCCCTTCCTTTTTTGTATGCTA
AACTACTGCGTGTCCTTTTATTTTGATCGCCGAACTATGGCACCGAGTCGCCGAACTATTGCGATGATCATTGGTTTGTT
GTTTCTTTGAGAGGGAGTGATGTT-TTTC-GAATATGGAGCACCTTGGGGGTGGCA-CCTGGGCGCGTGGCTAGGGAAAA
A-CGAACCCCAGGGGCCGATCTAGCACCGGTTCA-CCCCAGGCCGG--TCTTTTTCAGTGCCCTGGGAGGCCGAACGGAT
GGAGATGCTCTTA-------------------------------------------------------------------
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>chr3D_25
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--------------------------CGCCGTCAAACTCGACTTGCTCCGCGCCAACGCCGCCGCGAAACTCAAAGCTCA
AGACGCCAAGAAGAGGAACAACGACATCGCCTTCTTGATGGGCGGCGCTGACATGCTCCAGAGCGGCGACGAGAAGCTCA
AGGCGTGGTTCTTGGCCGAGCGCGGCCTCATCCTAAACCAGATACCGGCGACGCCGACGCCGACGCTGCCGCCCAGCCCG
GCGGC------TGATGACGA------TGAGACCAGGTCCGACGATGTCTCCGCCTCCGCGACGCTCAGCCCCACCG---A
CGATGCCTCCGCCGCGCCCAGCAGCACGGAAGATGCGCCGAACAGCCCGGAAGCC---GCGCCGATTCCTCCCAGCCCGC
GTACGCTGACGACTACGCCACCAGAGGTTGAACTCGACGCTTGATGTACTCCTTCCGCGCCCTTCCTTTTTTGTACGCCG
AACTACTGCGTGTCCTTTTATTTTGATCGCCGAACTGTGGCACCGAGTCGCCGAACTATTGCGATGATCGCCGGTTTGTT
GTTTCTTTGAGCGGGAATGATGTTCTTTT-GAATATGGAGCGCCTTGGGGGGCGGCGCCTGGGCGCGTGGCTGGG-GAAA
AATGAACCCCAGGGGCCGATCTAGCGCCGGCTCGCCCCCAGGCCGG--TCTTTTTCGGCGCCCTGGGAGGCCGAACGGCT
GGAGATGCTCTGAGAGCAGG------------------------------------------------------------
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>chr7B_25
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--------------------------CGCCGTCAAACTCGACTTGCTCCGCGCCAACGCCGCCGCGAAACTCCAAGCTCA
AGATGCCAAGAAGAGGAACAACGACCTCGCCTTCTTGATGGGCGGCGCTGACATGCTCCAGAGTGGCGACGAGAAGCTCA
AGGCGTGGTTCTTGGCCCAGCGCGACCTCATCCTGAATCAGATACCGGCGACGCTGACGCC------GCCGCCCAGCCCG
GCGGC------TGCTGATGACGACGACGAGACCAGGGACGACGATGTCTCCGCCTCCGCGACGCCCAGCCCCACTG---A
CGATGCCTCCGCCGCGCCCAGCAGCACAGAAGACGCGCCGAACAGCCTGGCAGCC---GCGCCGATTCCTCCCAGCCCGC
GTACGCCGACGACTAAGCCGCCGGAGGTTGAGCTCGGCGCTTGATGTACTCCTTCCGCGCCCTTCATTTTGTGTACGCCG
AACTACTGCGTGTCCTTTTATTTTGATCGCTGAACTGTGACACCGACTCACCGAACTATTGCGATGATCGCCGGTTTGTT
GTTTCTTTGAGCGGGAATGATGTT-TTTC-AAATATAGAGCGCCTTGAGGGGCGGCGCCTGGGCGCGTAGCTGGG-GTAA
AACGAACCCCGAAGGCCGATCTAGCGCCGGCTCGTCCCCATGCCGCTTT-TTTTTTGGCGTCCTGGAGGGCCGAACGGCT
GGAGATGCTCT---------------------------------------------------------------------
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>chr7B_25
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--------------------------CGCCGTCAAACTCGACTTGCTCCGCGCCAACGCCGCCGCGAAACTCAAAGCCCA
AGACGCCAAGAAGAGAAACAACGACCTCGCCTTCTTGATGGGCGGCGCTGACATGCTCCAGAGCGGCGACGAGAAGCTCA
AGGCGTGGTTCTTGGCCGAGCGCGGCCTCATCCTGAACCAGATACCGGCGACGCCGCCGCC------GCCGCCCAGCCCG
GCGGC------TGATGACGA------CGAGACCAGGGCTGACGATGTCTCCGACTCCGCGACGCCCAGCCCCACCGAC--
-GATGCCTACGCCGCGCCCAGCAGCACAGAGGACACGCAGAACAGCCCGGAAGCC---GCACCGATTCCTCCCAGCCCCC
GTACGCCGACGACTACGCCGCCGGAGGTTTACCTCGACGCTTGATGTACTCCTTCTGCGCCCTTCCTTTTTTGTACGCCG
AACTACTGCGTGTCCTTTTATTTTGATCGCCGAACTGTGGCACCGAGTCACCGAACTATTGCGATGATCGCCGGTTTGTT
GTTTCTTTGAGCGGGAATGATAGT-TTTT-GAATATGAAGCGCCTTGGGGGACGGCGCCTGGACGCGTGGCTGAG-AAAA
AACGAACCTCAAGACTCGATCTAGCGCCGGCTCACTTCCAGGCCTG--T-TTTTTGGGCGTCCTGGGAGGCCGAACGGCC
GGAGATGCTCTTA-------------------------------------------------------------------
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>chr4B_25
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--------------------------CGCCGTCAAACTCGACTTGCTCCGCGCCAACGCCGCCGCGAAACTCAAAGCTCA
AGACGCCAAGAAGAGGAACAACGACCTCGCCTTCTTGATGGGCGACGCTGACATGCTCCAGAGCGGCGACGAGAAGCTTA
AGGCGTGGTTCTTGGCCGAGCGTGGCCTCATCCTGAACCAGATATCGGCCACGCCGCCGCC------GTCGCCCAGCCCG
ACGGC------TGATGACGAT---GATGAGACCAGGGCCGACGATGTCTCCGCCTCCGCGACGCCCAGCCCCACCGACAA
CGATGCCTCCGCCGCGCCCAACAGCACAGAAGACGCGCCGAACAGCCCGAAAGCC---GCGCCGATTCCTCCCAGCCCGC
GTACGCCGACGACTACGCCGCCGGAGGTTGAACTCGACGCTTGATGTACTCCTTCCGTGCCCTTCCTTTTCTGTACGCCA
AACTACTACGTGTCCTTTTATTTTGATCGCCGAATTATGGCACCGAGTCGCTGAACTATTGCGATTTTCGCCATTTTGTT
GTTTCTTTGAGCGGGAATGATGTT-TTTC-GAATATGGAGTG-CTTTGGGGGCGGCGCCTGGACGCGTGACTGGG-AAAA
AATGAAACACAT-GGTCGATCTAGCGTCGGCTCGCCCTCAGGCCGGTCT-TTTT-CGACGGCCTGGGAGGCCGAACGG-T
GGAGATGCTCT---------------------------------------------------------------------
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>chr7B_27
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----------------------------CCGTCAAACTCGACTTGCTCCGCGTCAACGCCACCGCGAAACTCAAAGCTCA
AGATGCCAAGAAGAGGAACAACGACCTCGCCTTCTTGATGGGCGGCGCTGGCATGCTCCAGAGCGGCAACGAGAAGCTCA
AGGTGTGGTTCTTGGCCGAGCGCGGCCTCATCCTGAACCAGATACCAGCGACGCCGACGCC------GCCGCCCAGCCCG
GCGGC------TGATGACGA------TGAGACCAGGGCCGACGATGTCTCCGAGTCCGCGACGCCCAACCCCACCG---A
CGATGCCTCCGCCGCGCCCAACAGCACAGAGGACGCGCAGAACAGCCCGGAAGCC---GCGCCGATTCCTCCCAGCCCAC
GTACGCCGACGACTACGCCGCCGGAGATTGACCTCGACACTTGATGTACTCCTTCCGCGCCCTTCCTTTTTTGTACGCCG
AACTACTGCGTCTCCTTTTATTTTGATCGCCGAATTGTGGCACCGAGTCGCCGAACTATTGCGATGACCGCTGGTTTGTT
GTTCCTTTGAGCGGGAATGATGTT-TTTC-GAATATGGAGCGCCTTGGGGGACGGCGCCTGGGCGCGTGGCTGGG-AAAA
AACGAACCCCAGGGTCCGATCTAGCACCGGCTCGCCCCCAGGCCGG--CCTTTTTGGGCGCCCTGGGAGGCCGAACGGCT
GGAGATGCTCTTAG------------------------------------------------------------------
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>chr7B_27
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----------------------------CCGTCAAACTCGACTTGCTCCGCGCCAACGCCACCGCGAAACTCAGAGCTCA
AGACGCAAAGAAGAGACACAACGACCTCGCCTTCTTGATGGGCGGCGCTGACATGCTCCAGAGCGGCGACGATAATCTCA
AGGCGTGGTTCTTGGCCGAGCATGGCCTCATCCTAAACCAGATACCGGCGACGCCGACGCC------GTCGCCCAGCCCG
GCGGC------TGATGACAA------CGAGACCAGGGCCGGCGATGTCTCCGACTCCGTGACGCCCAACCCCACCG---A
CGATGCCTACGCCGCGCCCAGCAGCACAAAGGACGCGCAGAACAGCCCAAAAGCC---GCGCCGATTCCTCCCAGCCCCC
GTACGCTGACGACTACGCCGCCGGAGGTTTACCTCAACGCTTGATGTACTCCTTCCGCGCCCTTCCTTTTTTGTACGCCG
AACTACTGCGTGTCCTTTCATTTTGATCGCCGAACGGTGGCACCGAGTCGCCGAACTATTGCGATGATCACCGGTTTGTT
GTTTCTTTGAGTGGGAATGATGTT-TTTCCGAATATGAAGCGCCTTGGGGTGCGGCGCCTGGGCGCGTAGCTGGG-AAAA
AACGAACCCCAGGGCCCGATCTAGAGCCGGCTTGCCCCCAGGCCGG--CCTTTTTGGGTGCCCTGGGAGGCTGAATGGCT
GGAGATGCTCTTAGG-----------------------------------------------------------------
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>chr3A_804
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------------------------------CGACTGGTCTCAATCAACTGAGACTTAGCAAGACCGAATAAGTTACC---
-----TAACGTCTACAGCTAATTAAAGGCTAAAACCTTGTTTGGTGAGCCTTGATATCATGC----------------CC
TGAAATTTTAATTTCAAGCCAT-CGACCATTGACCAAAT-CTCCTGTGCGATTCACCTCG--------ACTACAAATGCC
CCGGCCCGCTCCCATCTCACTCCAGCT---G---AGACCTTCTGTTCCTGCTACAATGGCACGTCTCGCCACCACCGCCG
TGCTCCTCCTCTCCCTCCTTGCCGTCGCCAGCTGCCGCGTCCTTGAGACCATCTCCGACGACCAGGGCTCATCCAACTCC
GTCCTCCTCACTCAAGATGATCAGGCGGATGCTGCTGTTGCTGAGGTGACCCTTCCGGCTTTGCCCACCCCGGCAGTCAC
GGTGGAAGAGGACGTGCTCCGGCTCCCGTCCCACCGCCGCCCCTGCCACCTCCACCGTCACCTCTGGTGGGCGCGCCACC
ACGGCCTCTCTCACCACCGCGGCGCGTTCTCCGGTCCGGGCGAGGCCCGCGTCCATCCCTCCGTCGTCGACGTCGTGCCC
ACCGAGCTTGCCCGCGGGGAAGACCAAGAGACC---------GAGCTGGAGGCGGTCGCGGAGCCTGACCCCGACTCACG
CCCGGACACCGACGCCGCCGAGAAGCTGTTTCATGGCGAGGAGGAGGAAGACGCAGCCAAGGGGTGGAAGGTGGAGATGA
TCAGGAGGTTCCGCCACGGCATCCGCTTCCACCACCGTCACCATCTTCGCCACCACCACGAGGAGGACGGGGAGGAGCAC
GACGACCACGAGCAGGACAAGGATGAAGGCGCGAGCATGAACCTGTTCGGACGCTTCCACCACCGCCACCATCTTCGTCA
CCATCACGACCAGGACGTGGAGGAGGAGGACGACCACCAGCAGGACAAGGATGAAGGCCCGAAGATGAAGCTGTTCCGAC
GTTTCCACCACCACCACGCGCATGACAGCGACAACGAGGTCGACGAGGTGGAAGAACTGGCTAGGAGGCTGAGCGAGGCG
ATCATGAGAAGGAGGTTCAGCCATGGCGGCCCCCGCCAGCACCACCACCACCACCATGGAGCGGAGGGCGGGGTGAAGAA
CTGGTTCAAGGGCCTCATGAACCGATTCTAGACGTACC--------------GCCGGCCGGCGGCTGGTTGATTTGGTCG
TTTAGTTACTTTGGTTAATCTGTTCGCTGCACTGTGTGCGTGACGTGGAGTGCTCTGCCATTTCGTACTACCTTTTTTTT
TTTGCTTCCTATTCCACATTACATTACCACTTGGGTTTG---------------------TGTACTGCTGTGTTAGTTTA
CTCGTGAGGGTTGGTAGATTGTACGAGCAGCAAT-----GTG------TTTTTCTGCAGATTAACTAATACATTTGCCTT
GTTATATATGCATCTATAATTCTATATGTGCAATTTTATTGTTATCTCGTA-GGTTCGTATTAAAACTGGGTATGTTCAT
TGATCTCTGTTTTACCCCTCGCATTTGCATAGTTTCCGATGTTCCTTATGTTACAAGTTATCAATTGTAGTG-TTTAGCG
TTGCATAGAGCTAAAATTTAAACAAAATTTTGACGGAACTTCTAAGATTTTGGTGGGCGCCGAAATATTTGTAA----GT
TTGCAATTTCCAGTCAGATTTAAACTAATTTCAGATCAAATTTA------TCAATATTTTTGAATAATCAGGTGAAACTG
ATGGATCAAAATGCAG-ATTTTTTAAACATGAAATGATGATGAGGT-CCAAATTGTTATGTTACTGAAATATTAA-CCAT
CGTTGCTGCTTGGGAACTCAAACTCTTGATACTTTGGCATTGGTCTTATTTTCCTTTTGCGC-GGAGACGATTTGCCCTT
TCATTT--------------------------------------------------------------------------
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>chr3D_859
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-----TAACTCCTACAACTAATTAAGGGCT--AACCTTGTTAGGTGAGCCTTGATATCA-AAACTTATCTCGTCACACCA
CGAAATTTTAATTTCAAGCCAACCGACCATTGACCAAATACTCCGGTGCGATTCCCCTGATCCCCTCCACTACAAATGCC
CCGGTCCGCTCTCGTCTGACGCCACCTGCAG---AGACCTTCTGTTCCTGCTACAATGGCCCGCCTCGCCACCCTCGCCG
TGCTCCTCCTCTCCCTCCTGGCCGTCGCTAGCTGCCGCGTCCTTGAGACCATCCCCGACGACCAGGGCCCACCCAACCCC
GTCCTCCTCACCCAAGATGATCAGGCGGATGCTGCTGTTGCTGAGGTGACCCTTCCGGCTTTGCCCACCCCGGCAGTCAC
GGTGGACGGGGACGTGCTCCGGCTCCCCTCCCACCGCCGCCCCTGCCACCTCCACCGTCACCTCTGGTGGGCGCGCCACC
ACGGCCTCTCACACCACCGCGGCGCGTTCTCCGGTCCGGGCGAGGCGCGTGTCCATCCCGCCGTCG---ACGTCGTACTC
ACCGAGCTTGCCCGCGGAGAAGAGCAAGAGCCCAGGGAAGCTGAGCTGGAGGCGGTCGCGGAGCCTGACCCCGACTCACG
CCCGGACACCGACGCCGCAGAGAAGCTGTTTCATGGCGAGGAGGAGGAAGAGGCGGCGAAGGCGTGGAAGGTGGAGATGC
TAAGGAGGTTCCGCCACGGCATCCGATTCCACCACCGCCACCATCTTCGCCACCACCAGGAGCAGGACGGGGAGGAGCAC
GACGACCGCAAGCAGGACAAGGATGAAGGCGCGAGCATGAGCCTGTTCGGACGCTTCCACCACCGCCACCATCTTCGCCA
CCGCCACGAGCAGGACGTGGAGGAGGAGGAAGACCACAAGGAGGACAAGGACGCAGGCCCGAAGATGAAGCTGTTCGGAC
GTTTCCACCACCACCACGCGCACGACAGCGACAACGAGGTCGACGAGGTGGAAGAACTGGCTAGGAAGCTGAGCGAGGCG
ATCATGAGAAGGAGCTTCAGCCATGGCGGCCGCCGCC------ACCACCACCACCACGGCGCGGAGGGCGGGGTGAAGAA
GTGGTTCAAGGGCCTCATGAACCGATTCTAGACGTACC--------------GCCGGCCGGCGGCTGGTTGATTTGGTCG
TTTAATTACTTTGGTTAATCTGTTCTCTGCACTGTGTGCGTGACGTGGAGTGCTCTGCCATTTCGTACC-------TTTT
TTTGCTTCCTATTCCACATTACATTACTACTTGTGTTGA-----------------TATATGTACTGGTGTGTTAGTTTA
CTC---AGGGCTGTGAGATTGTACGAGCAGCAAT-----GTTATGTGTTTTTCCTGCAGATTAACTAATACATTTGTCTT
GT---------------------ATGTGTGCAATTTTATTGTTATCTCCTA-GGTTCGTATTAAAACTGGGTATGTTCAT
TGATCTCTGTTTTACCCCTCGCGTTTGCATAGTTTTCCATGTTCCTTATGTTACAAGTTATCAATTGTAGTTCTTTAGCG
TTGCATAGAGCTAAAATTTAAACAAAATTTTGACGAAACTTCTGAGATTTTGGTGGGCGCCAAAATATTTGTAA----GT
TTGCAATTTCTGGTCAGATATAAACTAATTTCAGAACACATTTA------TCAATATTTTTGAATAATCCGGTGAAATTG
ATGGATCAAAATGCAG-ATTTTTTT-ACCTGAAATGATGATAAGGTCCAAAATTGTTATGTTAACGAAATATTAA-CCAT
CGTTGCTGCTTAGGAACTCAAACTCTTGATACTTTGGTGTTGGTCTTATTTTCCTTTTGCGC-GGAGACGATTTGCCCTT
TCATTTTAGCGCATATACATT-----------------------------------------------------------
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>SNPs
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---------S-------------------------------S--------------------------------------
-------------------------S----------------------S-------------------S------S--S-
-----SSSSSS---------------------------------------------------------S-----------
---------------------------------S-------S------------S------S----------S-------
----SS--------------------------------------------------------------------S-----
---------S----------------------------------------S---------------------------S-
--------S-------------------------------------S---------------------------------
---S--S----------------------------------S-------S------------------------------
-----------------SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S---------SS---S-----------S--S------SSSSSSSSS
SSSSS---------------------------------------------S--------S------S--S-S--S--S--
----------S--------------S------------------S-------------S----------S----------
-------------------------------SSS-----------S----------------------------------
-------S--S--------------------------------------------------------S------------
-----------------------------S---------------------------------------S----S--SS-
S----------S-S--------------------------------------------------------S---------
----------S--------S--------------SS----------SS----------S-------S--S----------
----------------S----S----------S--S-SSS-S--------------------------------------
---------------S-----------------------S--------------------S-------------------
-S--------------------------S----S--------------S------S--------S---------------
----------------------S-------S-------------------S--------------------------S--
-----------------S--------------S----------S------------------------------------
--------------------------------------------------------------------------------
------------------S-----------------------------------S-------------------------
--------------------------------------SSSSSSSSSSSSSS----------------------------
-----------------------------------S---------------------------S----------------
--------------------------------S------SSSSSSSSSSSSSSSSS------------------------
----------------------------------SSSSS-------------------------S-----S----S----
-----SS-----------------------S---S-----------S---SS--------------SS---S--------
S--------S---S---SSSSS--------------S----------S------S-----------------------SS
-----S-S-----------S----------S---------S-------S-S----S------------------SSSS--
---------SS--S-----------------S---S------S-SSSSSS-----S---------------S----S---
------------S---S------SS-SS-------SSS-S-----------------------------------S----
------S-----------------S---SS--S----------------S----------SSS---S-------------
------S--S---S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2525
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-------------------------ACCATCGACGGGTCTCAATG-----------------------------------
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>reverse_4565
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----GTCCTTTAGTGCCGGTTCCA--------------------------------------------------------
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-------------------------------------------------------
