Multiple sequence alignment - TraesCS3B01G385700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G385700 chr3B 100.000 3210 0 0 1 3210 605679006 605675797 0.000000e+00 5928.0
1 TraesCS3B01G385700 chr3B 94.484 417 15 1 1 409 602440120 602440536 1.260000e-178 636.0
2 TraesCS3B01G385700 chr3B 93.285 417 20 1 1 409 99537779 99537363 2.740000e-170 608.0
3 TraesCS3B01G385700 chr3B 92.548 416 23 2 2 409 549875513 549875098 9.920000e-165 590.0
4 TraesCS3B01G385700 chr3B 97.368 38 0 1 412 448 549875080 549875043 2.670000e-06 63.9
5 TraesCS3B01G385700 chr3D 94.177 1975 89 12 691 2652 458629588 458627627 0.000000e+00 2987.0
6 TraesCS3B01G385700 chr3D 94.167 120 5 1 3027 3146 458627457 458627340 7.070000e-42 182.0
7 TraesCS3B01G385700 chr3D 94.286 35 2 0 2492 2526 587984456 587984422 2.000000e-03 54.7
8 TraesCS3B01G385700 chr3A 91.919 2017 90 34 713 2683 600932602 600930613 0.000000e+00 2754.0
9 TraesCS3B01G385700 chr3A 92.593 216 11 4 2957 3167 600929774 600929559 4.020000e-79 305.0
10 TraesCS3B01G385700 chr3A 91.176 68 5 1 448 515 601125041 601124975 1.230000e-14 91.6
11 TraesCS3B01G385700 chr1B 91.721 459 22 3 1 451 223788316 223788766 9.780000e-175 623.0
12 TraesCS3B01G385700 chr1B 89.574 470 26 6 1 447 679125620 679125151 2.780000e-160 575.0
13 TraesCS3B01G385700 chr1B 83.713 614 71 23 1628 2219 518540299 518539693 1.300000e-153 553.0
14 TraesCS3B01G385700 chr1A 84.072 609 68 22 1628 2215 486053002 486052402 7.780000e-156 560.0
15 TraesCS3B01G385700 chr2B 89.563 412 16 4 1 404 214283986 214284378 6.180000e-137 497.0
16 TraesCS3B01G385700 chr1D 86.016 379 41 9 1628 1998 386164843 386164469 2.320000e-106 396.0
17 TraesCS3B01G385700 chr1D 93.289 149 10 0 2067 2215 386164338 386164190 1.500000e-53 220.0
18 TraesCS3B01G385700 chr2A 95.556 225 10 0 109 333 33589962 33590186 8.470000e-96 361.0
19 TraesCS3B01G385700 chr2A 97.143 35 1 0 2492 2526 764817813 764817847 3.460000e-05 60.2
20 TraesCS3B01G385700 chr7A 94.667 225 12 0 109 333 90433518 90433294 1.830000e-92 350.0
21 TraesCS3B01G385700 chr7A 92.308 117 9 0 335 451 90433254 90433138 1.980000e-37 167.0
22 TraesCS3B01G385700 chr5A 82.171 387 55 11 1626 2001 650024473 650024090 1.440000e-83 320.0
23 TraesCS3B01G385700 chr5D 80.851 376 60 11 1626 1994 521674403 521674033 5.240000e-73 285.0
24 TraesCS3B01G385700 chr5B 80.319 376 62 11 1626 1994 658068111 658067741 1.130000e-69 274.0
25 TraesCS3B01G385700 chr4A 87.129 202 25 1 132 333 244492109 244492309 8.960000e-56 228.0
26 TraesCS3B01G385700 chr6D 96.154 130 5 0 1624 1753 73252387 73252258 2.510000e-51 213.0
27 TraesCS3B01G385700 chr2D 93.151 73 5 0 335 407 648502028 648501956 1.220000e-19 108.0
28 TraesCS3B01G385700 chr2D 97.143 35 1 0 2492 2526 638924001 638924035 3.460000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G385700 chr3B 605675797 605679006 3209 True 5928.0 5928 100.0000 1 3210 1 chr3B.!!$R2 3209
1 TraesCS3B01G385700 chr3D 458627340 458629588 2248 True 1584.5 2987 94.1720 691 3146 2 chr3D.!!$R2 2455
2 TraesCS3B01G385700 chr3A 600929559 600932602 3043 True 1529.5 2754 92.2560 713 3167 2 chr3A.!!$R2 2454
3 TraesCS3B01G385700 chr1B 518539693 518540299 606 True 553.0 553 83.7130 1628 2219 1 chr1B.!!$R1 591
4 TraesCS3B01G385700 chr1A 486052402 486053002 600 True 560.0 560 84.0720 1628 2215 1 chr1A.!!$R1 587
5 TraesCS3B01G385700 chr1D 386164190 386164843 653 True 308.0 396 89.6525 1628 2215 2 chr1D.!!$R1 587

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
164 165 0.032017 AGGGAGATCCGTACCTGCTT 60.032 55.0 0.0 0.0 41.52 3.91 F
614 615 0.036306 AGTTCGGGCGGTTGATCTTT 59.964 50.0 0.0 0.0 0.00 2.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1849 1862 0.176680 ACCGCTGCAATAGAGTCCAG 59.823 55.0 0.0 0.0 0.0 3.86 R
2471 2573 0.831307 AGCTTGAATCCGGTCCCTAC 59.169 55.0 0.0 0.0 0.0 3.18 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.512926 CGAAGAGGGTGTTGAAGGTG 58.487 55.000 0.00 0.00 0.00 4.00
20 21 1.878102 CGAAGAGGGTGTTGAAGGTGG 60.878 57.143 0.00 0.00 0.00 4.61
21 22 1.420138 GAAGAGGGTGTTGAAGGTGGA 59.580 52.381 0.00 0.00 0.00 4.02
22 23 0.765510 AGAGGGTGTTGAAGGTGGAC 59.234 55.000 0.00 0.00 0.00 4.02
23 24 0.472471 GAGGGTGTTGAAGGTGGACA 59.528 55.000 0.00 0.00 0.00 4.02
24 25 0.474184 AGGGTGTTGAAGGTGGACAG 59.526 55.000 0.00 0.00 0.00 3.51
25 26 0.537371 GGGTGTTGAAGGTGGACAGG 60.537 60.000 0.00 0.00 0.00 4.00
26 27 0.472471 GGTGTTGAAGGTGGACAGGA 59.528 55.000 0.00 0.00 0.00 3.86
27 28 1.133915 GGTGTTGAAGGTGGACAGGAA 60.134 52.381 0.00 0.00 0.00 3.36
28 29 2.222027 GTGTTGAAGGTGGACAGGAAG 58.778 52.381 0.00 0.00 0.00 3.46
29 30 2.123589 TGTTGAAGGTGGACAGGAAGA 58.876 47.619 0.00 0.00 0.00 2.87
30 31 2.104792 TGTTGAAGGTGGACAGGAAGAG 59.895 50.000 0.00 0.00 0.00 2.85
31 32 1.352083 TGAAGGTGGACAGGAAGAGG 58.648 55.000 0.00 0.00 0.00 3.69
32 33 1.353091 GAAGGTGGACAGGAAGAGGT 58.647 55.000 0.00 0.00 0.00 3.85
33 34 1.002544 GAAGGTGGACAGGAAGAGGTG 59.997 57.143 0.00 0.00 0.00 4.00
34 35 0.838122 AGGTGGACAGGAAGAGGTGG 60.838 60.000 0.00 0.00 0.00 4.61
35 36 1.679898 GTGGACAGGAAGAGGTGGG 59.320 63.158 0.00 0.00 0.00 4.61
36 37 1.538876 TGGACAGGAAGAGGTGGGG 60.539 63.158 0.00 0.00 0.00 4.96
37 38 2.671682 GACAGGAAGAGGTGGGGC 59.328 66.667 0.00 0.00 0.00 5.80
38 39 3.316573 GACAGGAAGAGGTGGGGCG 62.317 68.421 0.00 0.00 0.00 6.13
39 40 4.101448 CAGGAAGAGGTGGGGCGG 62.101 72.222 0.00 0.00 0.00 6.13
62 63 4.816984 GGAGGCGGAGGACGGAGA 62.817 72.222 0.00 0.00 44.51 3.71
63 64 3.213402 GAGGCGGAGGACGGAGAG 61.213 72.222 0.00 0.00 44.51 3.20
64 65 4.824515 AGGCGGAGGACGGAGAGG 62.825 72.222 0.00 0.00 44.51 3.69
65 66 4.816984 GGCGGAGGACGGAGAGGA 62.817 72.222 0.00 0.00 44.51 3.71
66 67 3.213402 GCGGAGGACGGAGAGGAG 61.213 72.222 0.00 0.00 44.51 3.69
67 68 3.213402 CGGAGGACGGAGAGGAGC 61.213 72.222 0.00 0.00 39.42 4.70
68 69 2.043852 GGAGGACGGAGAGGAGCA 60.044 66.667 0.00 0.00 0.00 4.26
69 70 2.124693 GGAGGACGGAGAGGAGCAG 61.125 68.421 0.00 0.00 0.00 4.24
70 71 2.757917 AGGACGGAGAGGAGCAGC 60.758 66.667 0.00 0.00 0.00 5.25
71 72 3.071206 GGACGGAGAGGAGCAGCA 61.071 66.667 0.00 0.00 0.00 4.41
72 73 2.493973 GACGGAGAGGAGCAGCAG 59.506 66.667 0.00 0.00 0.00 4.24
73 74 3.073735 ACGGAGAGGAGCAGCAGG 61.074 66.667 0.00 0.00 0.00 4.85
74 75 2.757508 CGGAGAGGAGCAGCAGGA 60.758 66.667 0.00 0.00 0.00 3.86
75 76 2.784356 CGGAGAGGAGCAGCAGGAG 61.784 68.421 0.00 0.00 0.00 3.69
76 77 2.433994 GGAGAGGAGCAGCAGGAGG 61.434 68.421 0.00 0.00 0.00 4.30
77 78 1.381056 GAGAGGAGCAGCAGGAGGA 60.381 63.158 0.00 0.00 0.00 3.71
78 79 1.381599 AGAGGAGCAGCAGGAGGAG 60.382 63.158 0.00 0.00 0.00 3.69
79 80 2.365370 AGGAGCAGCAGGAGGAGG 60.365 66.667 0.00 0.00 0.00 4.30
80 81 2.364842 GGAGCAGCAGGAGGAGGA 60.365 66.667 0.00 0.00 0.00 3.71
81 82 2.433994 GGAGCAGCAGGAGGAGGAG 61.434 68.421 0.00 0.00 0.00 3.69
82 83 3.082701 AGCAGCAGGAGGAGGAGC 61.083 66.667 0.00 0.00 0.00 4.70
83 84 4.173924 GCAGCAGGAGGAGGAGCC 62.174 72.222 0.00 0.00 0.00 4.70
84 85 3.847602 CAGCAGGAGGAGGAGCCG 61.848 72.222 0.00 0.00 43.43 5.52
137 138 4.735132 CGAGCGCGTGGGGAGAAA 62.735 66.667 8.43 0.00 0.00 2.52
138 139 2.125106 GAGCGCGTGGGGAGAAAT 60.125 61.111 8.43 0.00 0.00 2.17
139 140 2.125106 AGCGCGTGGGGAGAAATC 60.125 61.111 8.43 0.00 0.00 2.17
140 141 2.435938 GCGCGTGGGGAGAAATCA 60.436 61.111 8.43 0.00 0.00 2.57
141 142 2.750888 GCGCGTGGGGAGAAATCAC 61.751 63.158 8.43 0.00 0.00 3.06
142 143 2.106683 CGCGTGGGGAGAAATCACC 61.107 63.158 0.00 0.00 0.00 4.02
143 144 2.106683 GCGTGGGGAGAAATCACCG 61.107 63.158 0.00 0.00 0.00 4.94
144 145 1.449601 CGTGGGGAGAAATCACCGG 60.450 63.158 0.00 0.00 0.00 5.28
145 146 1.895020 CGTGGGGAGAAATCACCGGA 61.895 60.000 9.46 0.00 0.00 5.14
146 147 0.107654 GTGGGGAGAAATCACCGGAG 60.108 60.000 9.46 0.00 0.00 4.63
161 162 2.734893 GGAGGGAGATCCGTACCTG 58.265 63.158 0.00 0.00 41.52 4.00
162 163 1.465200 GGAGGGAGATCCGTACCTGC 61.465 65.000 0.00 0.00 41.52 4.85
163 164 0.468400 GAGGGAGATCCGTACCTGCT 60.468 60.000 0.00 0.00 41.52 4.24
164 165 0.032017 AGGGAGATCCGTACCTGCTT 60.032 55.000 0.00 0.00 41.52 3.91
165 166 0.105039 GGGAGATCCGTACCTGCTTG 59.895 60.000 0.00 0.00 36.71 4.01
166 167 0.105039 GGAGATCCGTACCTGCTTGG 59.895 60.000 0.00 0.00 42.93 3.61
167 168 1.112113 GAGATCCGTACCTGCTTGGA 58.888 55.000 3.40 0.00 39.71 3.53
168 169 1.689273 GAGATCCGTACCTGCTTGGAT 59.311 52.381 3.40 0.00 43.75 3.41
169 170 2.103263 GAGATCCGTACCTGCTTGGATT 59.897 50.000 3.40 0.00 41.21 3.01
170 171 2.158900 AGATCCGTACCTGCTTGGATTG 60.159 50.000 3.40 0.00 41.21 2.67
171 172 0.981183 TCCGTACCTGCTTGGATTGT 59.019 50.000 3.40 0.00 39.71 2.71
172 173 1.066430 TCCGTACCTGCTTGGATTGTC 60.066 52.381 3.40 0.00 39.71 3.18
173 174 0.999406 CGTACCTGCTTGGATTGTCG 59.001 55.000 3.40 0.00 39.71 4.35
174 175 1.369625 GTACCTGCTTGGATTGTCGG 58.630 55.000 3.40 0.00 39.71 4.79
175 176 0.392461 TACCTGCTTGGATTGTCGGC 60.392 55.000 3.40 0.00 39.71 5.54
176 177 2.753966 CCTGCTTGGATTGTCGGCG 61.754 63.158 0.00 0.00 38.35 6.46
177 178 1.741401 CTGCTTGGATTGTCGGCGA 60.741 57.895 4.99 4.99 0.00 5.54
178 179 1.970917 CTGCTTGGATTGTCGGCGAC 61.971 60.000 31.68 31.68 0.00 5.19
179 180 2.750888 GCTTGGATTGTCGGCGACC 61.751 63.158 34.28 21.08 0.00 4.79
200 201 4.430765 GCCGCTCCCGAAGACGAA 62.431 66.667 0.00 0.00 42.66 3.85
201 202 2.202623 CCGCTCCCGAAGACGAAG 60.203 66.667 0.00 0.00 42.66 3.79
202 203 2.567049 CGCTCCCGAAGACGAAGT 59.433 61.111 0.00 0.00 42.66 3.01
203 204 1.080705 CGCTCCCGAAGACGAAGTT 60.081 57.895 0.00 0.00 42.66 2.66
204 205 1.344942 CGCTCCCGAAGACGAAGTTG 61.345 60.000 0.00 0.00 42.66 3.16
205 206 3.923111 CGCTCCCGAAGACGAAGTTGT 62.923 57.143 0.00 0.00 42.66 3.32
214 215 2.844146 CGAAGTTGTCGTCACGGC 59.156 61.111 0.00 0.00 45.09 5.68
215 216 2.844146 GAAGTTGTCGTCACGGCG 59.156 61.111 4.80 4.80 32.50 6.46
216 217 2.654912 GAAGTTGTCGTCACGGCGG 61.655 63.158 13.24 0.00 32.50 6.13
217 218 3.435030 AAGTTGTCGTCACGGCGGT 62.435 57.895 13.24 0.00 32.50 5.68
218 219 2.050168 GTTGTCGTCACGGCGGTA 60.050 61.111 13.24 0.00 32.50 4.02
219 220 2.084681 GTTGTCGTCACGGCGGTAG 61.085 63.158 13.24 0.03 32.50 3.18
220 221 3.271706 TTGTCGTCACGGCGGTAGG 62.272 63.158 13.24 4.37 32.50 3.18
221 222 3.741476 GTCGTCACGGCGGTAGGT 61.741 66.667 13.24 0.00 0.00 3.08
222 223 2.985282 TCGTCACGGCGGTAGGTT 60.985 61.111 13.24 0.00 0.00 3.50
223 224 1.673993 TCGTCACGGCGGTAGGTTA 60.674 57.895 13.24 0.00 0.00 2.85
224 225 1.226491 CGTCACGGCGGTAGGTTAG 60.226 63.158 13.24 0.00 0.00 2.34
225 226 1.517913 GTCACGGCGGTAGGTTAGC 60.518 63.158 13.24 0.00 0.00 3.09
226 227 2.202837 CACGGCGGTAGGTTAGCC 60.203 66.667 13.24 0.00 46.88 3.93
229 230 4.231439 GGCGGTAGGTTAGCCCCG 62.231 72.222 8.62 8.62 44.80 5.73
230 231 4.231439 GCGGTAGGTTAGCCCCGG 62.231 72.222 13.64 0.00 39.16 5.73
231 232 4.231439 CGGTAGGTTAGCCCCGGC 62.231 72.222 0.00 0.00 36.39 6.13
232 233 3.870190 GGTAGGTTAGCCCCGGCC 61.870 72.222 1.02 0.00 43.17 6.13
233 234 3.085296 GTAGGTTAGCCCCGGCCA 61.085 66.667 2.24 0.00 43.17 5.36
234 235 3.085296 TAGGTTAGCCCCGGCCAC 61.085 66.667 2.24 0.00 43.17 5.01
256 257 3.554342 CCGCCCTCCCAGATCCAG 61.554 72.222 0.00 0.00 0.00 3.86
257 258 2.444706 CGCCCTCCCAGATCCAGA 60.445 66.667 0.00 0.00 0.00 3.86
258 259 2.801631 CGCCCTCCCAGATCCAGAC 61.802 68.421 0.00 0.00 0.00 3.51
259 260 2.447714 GCCCTCCCAGATCCAGACC 61.448 68.421 0.00 0.00 0.00 3.85
260 261 1.316266 CCCTCCCAGATCCAGACCT 59.684 63.158 0.00 0.00 0.00 3.85
261 262 0.762461 CCCTCCCAGATCCAGACCTC 60.762 65.000 0.00 0.00 0.00 3.85
262 263 1.112315 CCTCCCAGATCCAGACCTCG 61.112 65.000 0.00 0.00 0.00 4.63
263 264 0.396417 CTCCCAGATCCAGACCTCGT 60.396 60.000 0.00 0.00 0.00 4.18
264 265 0.395862 TCCCAGATCCAGACCTCGTC 60.396 60.000 0.00 0.00 0.00 4.20
265 266 1.729470 CCCAGATCCAGACCTCGTCG 61.729 65.000 0.00 0.00 37.67 5.12
266 267 1.064946 CAGATCCAGACCTCGTCGC 59.935 63.158 0.00 0.00 37.67 5.19
267 268 2.122167 AGATCCAGACCTCGTCGCC 61.122 63.158 0.00 0.00 37.67 5.54
268 269 2.043852 ATCCAGACCTCGTCGCCT 60.044 61.111 0.00 0.00 37.67 5.52
269 270 2.065906 GATCCAGACCTCGTCGCCTC 62.066 65.000 0.00 0.00 37.67 4.70
270 271 2.559922 ATCCAGACCTCGTCGCCTCT 62.560 60.000 0.00 0.00 37.67 3.69
271 272 2.766400 CCAGACCTCGTCGCCTCTC 61.766 68.421 0.00 0.00 37.67 3.20
272 273 2.438795 AGACCTCGTCGCCTCTCC 60.439 66.667 0.00 0.00 37.67 3.71
273 274 3.519930 GACCTCGTCGCCTCTCCC 61.520 72.222 0.00 0.00 0.00 4.30
274 275 4.361971 ACCTCGTCGCCTCTCCCA 62.362 66.667 0.00 0.00 0.00 4.37
275 276 3.068691 CCTCGTCGCCTCTCCCAA 61.069 66.667 0.00 0.00 0.00 4.12
276 277 2.427245 CCTCGTCGCCTCTCCCAAT 61.427 63.158 0.00 0.00 0.00 3.16
277 278 1.066587 CTCGTCGCCTCTCCCAATC 59.933 63.158 0.00 0.00 0.00 2.67
278 279 2.107141 CGTCGCCTCTCCCAATCC 59.893 66.667 0.00 0.00 0.00 3.01
279 280 2.721167 CGTCGCCTCTCCCAATCCA 61.721 63.158 0.00 0.00 0.00 3.41
280 281 1.144936 GTCGCCTCTCCCAATCCAG 59.855 63.158 0.00 0.00 0.00 3.86
281 282 2.203126 CGCCTCTCCCAATCCAGC 60.203 66.667 0.00 0.00 0.00 4.85
282 283 2.203126 GCCTCTCCCAATCCAGCG 60.203 66.667 0.00 0.00 0.00 5.18
283 284 2.735772 GCCTCTCCCAATCCAGCGA 61.736 63.158 0.00 0.00 0.00 4.93
284 285 1.445095 CCTCTCCCAATCCAGCGAG 59.555 63.158 0.00 0.00 0.00 5.03
285 286 1.227497 CTCTCCCAATCCAGCGAGC 60.227 63.158 0.00 0.00 0.00 5.03
286 287 1.964608 CTCTCCCAATCCAGCGAGCA 61.965 60.000 0.00 0.00 0.00 4.26
287 288 1.817099 CTCCCAATCCAGCGAGCAC 60.817 63.158 0.00 0.00 0.00 4.40
288 289 2.046023 CCCAATCCAGCGAGCACA 60.046 61.111 0.00 0.00 0.00 4.57
289 290 1.452651 CCCAATCCAGCGAGCACAT 60.453 57.895 0.00 0.00 0.00 3.21
290 291 1.721664 CCCAATCCAGCGAGCACATG 61.722 60.000 0.00 0.00 0.00 3.21
291 292 1.063649 CAATCCAGCGAGCACATGC 59.936 57.895 0.00 0.00 42.49 4.06
292 293 2.117156 AATCCAGCGAGCACATGCC 61.117 57.895 0.00 0.00 43.38 4.40
302 303 4.170062 CACATGCCGCGGCTTCAG 62.170 66.667 45.79 33.23 42.51 3.02
314 315 4.711949 CTTCAGCTGCAGGGGCGT 62.712 66.667 17.12 0.00 45.35 5.68
315 316 4.269523 TTCAGCTGCAGGGGCGTT 62.270 61.111 17.12 0.00 45.35 4.84
316 317 3.790416 TTCAGCTGCAGGGGCGTTT 62.790 57.895 17.12 0.00 45.35 3.60
317 318 3.297620 CAGCTGCAGGGGCGTTTT 61.298 61.111 17.12 0.00 45.35 2.43
318 319 2.985847 AGCTGCAGGGGCGTTTTC 60.986 61.111 17.12 0.00 45.35 2.29
319 320 4.056125 GCTGCAGGGGCGTTTTCC 62.056 66.667 17.12 0.00 45.35 3.13
320 321 2.282462 CTGCAGGGGCGTTTTCCT 60.282 61.111 5.57 0.00 45.35 3.36
325 326 2.728397 AGGGGCGTTTTCCTGAAAC 58.272 52.632 0.00 0.00 43.36 2.78
326 327 0.106419 AGGGGCGTTTTCCTGAAACA 60.106 50.000 3.00 0.00 46.39 2.83
327 328 0.747852 GGGGCGTTTTCCTGAAACAA 59.252 50.000 3.00 0.00 46.39 2.83
328 329 1.537348 GGGGCGTTTTCCTGAAACAAC 60.537 52.381 3.00 0.00 46.39 3.32
329 330 1.472990 GGCGTTTTCCTGAAACAACG 58.527 50.000 10.82 10.82 46.39 4.10
330 331 1.472990 GCGTTTTCCTGAAACAACGG 58.527 50.000 14.91 2.50 46.39 4.44
331 332 1.472990 CGTTTTCCTGAAACAACGGC 58.527 50.000 8.32 0.00 46.39 5.68
332 333 1.064952 CGTTTTCCTGAAACAACGGCT 59.935 47.619 8.32 0.00 46.39 5.52
333 334 2.459934 GTTTTCCTGAAACAACGGCTG 58.540 47.619 0.00 0.00 45.57 4.85
334 335 1.028905 TTTCCTGAAACAACGGCTGG 58.971 50.000 0.00 0.00 0.00 4.85
335 336 0.181587 TTCCTGAAACAACGGCTGGA 59.818 50.000 0.00 0.00 0.00 3.86
336 337 0.181587 TCCTGAAACAACGGCTGGAA 59.818 50.000 0.00 0.00 0.00 3.53
337 338 1.028905 CCTGAAACAACGGCTGGAAA 58.971 50.000 0.00 0.00 0.00 3.13
338 339 1.407258 CCTGAAACAACGGCTGGAAAA 59.593 47.619 0.00 0.00 0.00 2.29
339 340 2.459934 CTGAAACAACGGCTGGAAAAC 58.540 47.619 0.00 0.00 0.00 2.43
340 341 1.202200 TGAAACAACGGCTGGAAAACG 60.202 47.619 0.00 0.00 0.00 3.60
341 342 1.064357 GAAACAACGGCTGGAAAACGA 59.936 47.619 0.00 0.00 0.00 3.85
342 343 1.096416 AACAACGGCTGGAAAACGAA 58.904 45.000 0.00 0.00 0.00 3.85
343 344 0.379316 ACAACGGCTGGAAAACGAAC 59.621 50.000 0.00 0.00 0.00 3.95
344 345 0.656205 CAACGGCTGGAAAACGAACG 60.656 55.000 0.00 0.00 0.00 3.95
345 346 2.127383 CGGCTGGAAAACGAACGC 60.127 61.111 0.00 0.00 0.00 4.84
346 347 2.127383 GGCTGGAAAACGAACGCG 60.127 61.111 3.53 3.53 44.79 6.01
347 348 2.795389 GCTGGAAAACGAACGCGC 60.795 61.111 5.73 0.00 42.48 6.86
348 349 2.496794 CTGGAAAACGAACGCGCG 60.497 61.111 30.96 30.96 42.48 6.86
350 351 2.789723 GGAAAACGAACGCGCGTG 60.790 61.111 38.44 27.05 44.86 5.34
351 352 3.438539 GAAAACGAACGCGCGTGC 61.439 61.111 38.44 34.63 44.86 5.34
352 353 4.949125 AAAACGAACGCGCGTGCC 62.949 61.111 38.44 28.29 44.86 5.01
383 384 3.574445 CGCTCTCGTCCGTCCGAT 61.574 66.667 0.00 0.00 36.08 4.18
384 385 2.024871 GCTCTCGTCCGTCCGATG 59.975 66.667 0.00 0.00 36.08 3.84
385 386 2.470362 GCTCTCGTCCGTCCGATGA 61.470 63.158 0.00 0.00 36.08 2.92
386 387 1.989966 GCTCTCGTCCGTCCGATGAA 61.990 60.000 0.00 0.00 36.05 2.57
387 388 0.450583 CTCTCGTCCGTCCGATGAAA 59.549 55.000 0.00 0.00 36.05 2.69
388 389 0.450583 TCTCGTCCGTCCGATGAAAG 59.549 55.000 0.00 0.00 36.05 2.62
389 390 0.450583 CTCGTCCGTCCGATGAAAGA 59.549 55.000 0.00 0.00 36.05 2.52
390 391 0.450583 TCGTCCGTCCGATGAAAGAG 59.549 55.000 0.00 0.00 33.39 2.85
391 392 0.450583 CGTCCGTCCGATGAAAGAGA 59.549 55.000 0.00 0.00 0.00 3.10
392 393 1.794437 CGTCCGTCCGATGAAAGAGAC 60.794 57.143 0.00 0.00 0.00 3.36
397 398 2.733517 GTCCGATGAAAGAGACGATCC 58.266 52.381 0.00 0.00 0.00 3.36
398 399 1.333931 TCCGATGAAAGAGACGATCCG 59.666 52.381 0.00 0.00 0.00 4.18
399 400 1.333931 CCGATGAAAGAGACGATCCGA 59.666 52.381 0.00 0.00 0.00 4.55
400 401 2.376956 CGATGAAAGAGACGATCCGAC 58.623 52.381 0.00 0.00 0.00 4.79
401 402 2.376956 GATGAAAGAGACGATCCGACG 58.623 52.381 0.00 0.00 39.31 5.12
402 403 0.450583 TGAAAGAGACGATCCGACGG 59.549 55.000 7.84 7.84 37.61 4.79
403 404 0.731417 GAAAGAGACGATCCGACGGA 59.269 55.000 20.85 20.85 37.61 4.69
404 405 0.450983 AAAGAGACGATCCGACGGAC 59.549 55.000 21.02 12.25 32.98 4.79
405 406 1.703438 AAGAGACGATCCGACGGACG 61.703 60.000 26.39 26.39 42.18 4.79
406 407 3.786918 GAGACGATCCGACGGACGC 62.787 68.421 27.32 21.68 41.07 5.19
426 427 4.471726 GACGCGTGATCGGTCGGT 62.472 66.667 20.70 0.00 37.56 4.69
427 428 3.958822 GACGCGTGATCGGTCGGTT 62.959 63.158 20.70 0.00 37.56 4.44
428 429 3.541831 CGCGTGATCGGTCGGTTG 61.542 66.667 0.00 0.00 37.56 3.77
429 430 3.849953 GCGTGATCGGTCGGTTGC 61.850 66.667 0.00 0.00 37.56 4.17
430 431 2.431771 CGTGATCGGTCGGTTGCA 60.432 61.111 0.00 0.00 0.00 4.08
431 432 2.726691 CGTGATCGGTCGGTTGCAC 61.727 63.158 0.00 0.00 0.00 4.57
432 433 2.431771 TGATCGGTCGGTTGCACG 60.432 61.111 0.00 0.00 0.00 5.34
433 434 2.126228 GATCGGTCGGTTGCACGA 60.126 61.111 0.00 0.00 41.13 4.35
434 435 2.577059 ATCGGTCGGTTGCACGAT 59.423 55.556 2.53 2.33 45.47 3.73
435 436 0.248743 GATCGGTCGGTTGCACGATA 60.249 55.000 7.52 0.00 44.99 2.92
436 437 0.248907 ATCGGTCGGTTGCACGATAG 60.249 55.000 5.91 2.77 45.47 2.08
437 438 2.514013 CGGTCGGTTGCACGATAGC 61.514 63.158 2.53 0.00 45.47 2.97
438 439 1.153628 GGTCGGTTGCACGATAGCT 60.154 57.895 2.53 0.00 45.47 3.32
439 440 0.739813 GGTCGGTTGCACGATAGCTT 60.740 55.000 2.53 0.00 45.47 3.74
440 441 1.076332 GTCGGTTGCACGATAGCTTT 58.924 50.000 2.53 0.00 45.47 3.51
441 442 1.463444 GTCGGTTGCACGATAGCTTTT 59.537 47.619 2.53 0.00 45.47 2.27
442 443 1.730064 TCGGTTGCACGATAGCTTTTC 59.270 47.619 0.00 0.00 38.06 2.29
443 444 1.202031 CGGTTGCACGATAGCTTTTCC 60.202 52.381 0.00 0.00 42.67 3.13
444 445 1.132453 GGTTGCACGATAGCTTTTCCC 59.868 52.381 0.00 0.00 42.67 3.97
445 446 1.810151 GTTGCACGATAGCTTTTCCCA 59.190 47.619 0.00 0.00 42.67 4.37
446 447 2.418368 TGCACGATAGCTTTTCCCAT 57.582 45.000 0.00 0.00 42.67 4.00
447 448 2.722094 TGCACGATAGCTTTTCCCATT 58.278 42.857 0.00 0.00 42.67 3.16
448 449 3.879998 TGCACGATAGCTTTTCCCATTA 58.120 40.909 0.00 0.00 42.67 1.90
449 450 4.460263 TGCACGATAGCTTTTCCCATTAT 58.540 39.130 0.00 0.00 42.67 1.28
450 451 4.887071 TGCACGATAGCTTTTCCCATTATT 59.113 37.500 0.00 0.00 42.67 1.40
451 452 5.008613 TGCACGATAGCTTTTCCCATTATTC 59.991 40.000 0.00 0.00 42.67 1.75
452 453 5.008613 GCACGATAGCTTTTCCCATTATTCA 59.991 40.000 0.00 0.00 42.67 2.57
453 454 6.294176 GCACGATAGCTTTTCCCATTATTCAT 60.294 38.462 0.00 0.00 42.67 2.57
454 455 7.094805 GCACGATAGCTTTTCCCATTATTCATA 60.095 37.037 0.00 0.00 42.67 2.15
455 456 8.230486 CACGATAGCTTTTCCCATTATTCATAC 58.770 37.037 0.00 0.00 42.67 2.39
456 457 7.936847 ACGATAGCTTTTCCCATTATTCATACA 59.063 33.333 0.00 0.00 42.67 2.29
457 458 8.230486 CGATAGCTTTTCCCATTATTCATACAC 58.770 37.037 0.00 0.00 0.00 2.90
458 459 8.995027 ATAGCTTTTCCCATTATTCATACACA 57.005 30.769 0.00 0.00 0.00 3.72
459 460 7.902920 AGCTTTTCCCATTATTCATACACAT 57.097 32.000 0.00 0.00 0.00 3.21
460 461 8.995027 AGCTTTTCCCATTATTCATACACATA 57.005 30.769 0.00 0.00 0.00 2.29
461 462 9.420118 AGCTTTTCCCATTATTCATACACATAA 57.580 29.630 0.00 0.00 0.00 1.90
481 482 9.520204 CACATAATACAAAGAAAACCATGATCC 57.480 33.333 0.00 0.00 0.00 3.36
482 483 9.479549 ACATAATACAAAGAAAACCATGATCCT 57.520 29.630 0.00 0.00 0.00 3.24
485 486 5.473066 ACAAAGAAAACCATGATCCTTGG 57.527 39.130 9.64 9.64 40.26 3.61
486 487 4.284234 ACAAAGAAAACCATGATCCTTGGG 59.716 41.667 14.42 2.82 38.64 4.12
487 488 3.105959 AGAAAACCATGATCCTTGGGG 57.894 47.619 14.42 1.23 38.64 4.96
488 489 2.383338 AGAAAACCATGATCCTTGGGGT 59.617 45.455 14.42 1.79 38.64 4.95
489 490 2.236489 AAACCATGATCCTTGGGGTG 57.764 50.000 14.42 0.00 38.64 4.61
490 491 0.324645 AACCATGATCCTTGGGGTGC 60.325 55.000 14.42 0.00 38.64 5.01
491 492 1.456331 CCATGATCCTTGGGGTGCC 60.456 63.158 0.00 0.00 0.00 5.01
492 493 1.456331 CATGATCCTTGGGGTGCCC 60.456 63.158 0.00 0.00 45.71 5.36
515 516 0.312729 GCCTCGGCTACTCTCTAAGC 59.687 60.000 0.00 0.00 38.26 3.09
516 517 1.975660 CCTCGGCTACTCTCTAAGCT 58.024 55.000 0.00 0.00 38.80 3.74
517 518 2.303175 CCTCGGCTACTCTCTAAGCTT 58.697 52.381 3.48 3.48 38.80 3.74
518 519 3.478509 CCTCGGCTACTCTCTAAGCTTA 58.521 50.000 5.94 5.94 38.80 3.09
519 520 3.884091 CCTCGGCTACTCTCTAAGCTTAA 59.116 47.826 7.74 0.00 38.80 1.85
520 521 4.261280 CCTCGGCTACTCTCTAAGCTTAAC 60.261 50.000 7.74 0.00 38.80 2.01
521 522 4.525024 TCGGCTACTCTCTAAGCTTAACT 58.475 43.478 7.74 0.00 38.80 2.24
522 523 4.575645 TCGGCTACTCTCTAAGCTTAACTC 59.424 45.833 7.74 0.00 38.80 3.01
523 524 4.553156 CGGCTACTCTCTAAGCTTAACTCG 60.553 50.000 7.74 0.00 38.80 4.18
524 525 4.575645 GGCTACTCTCTAAGCTTAACTCGA 59.424 45.833 7.74 0.41 38.80 4.04
525 526 5.239963 GGCTACTCTCTAAGCTTAACTCGAT 59.760 44.000 7.74 0.00 38.80 3.59
526 527 6.427547 GGCTACTCTCTAAGCTTAACTCGATA 59.572 42.308 7.74 0.00 38.80 2.92
527 528 7.120138 GGCTACTCTCTAAGCTTAACTCGATAT 59.880 40.741 7.74 0.00 38.80 1.63
528 529 8.508875 GCTACTCTCTAAGCTTAACTCGATATT 58.491 37.037 7.74 0.00 35.80 1.28
531 532 8.688151 ACTCTCTAAGCTTAACTCGATATTTGT 58.312 33.333 7.74 0.00 0.00 2.83
532 533 9.522804 CTCTCTAAGCTTAACTCGATATTTGTT 57.477 33.333 7.74 0.00 0.00 2.83
533 534 9.302345 TCTCTAAGCTTAACTCGATATTTGTTG 57.698 33.333 7.74 0.00 0.00 3.33
534 535 7.906160 TCTAAGCTTAACTCGATATTTGTTGC 58.094 34.615 7.74 0.00 0.00 4.17
535 536 6.494893 AAGCTTAACTCGATATTTGTTGCA 57.505 33.333 0.00 0.00 0.00 4.08
536 537 6.494893 AGCTTAACTCGATATTTGTTGCAA 57.505 33.333 0.00 0.00 0.00 4.08
537 538 6.908825 AGCTTAACTCGATATTTGTTGCAAA 58.091 32.000 0.00 0.00 0.00 3.68
538 539 7.023575 AGCTTAACTCGATATTTGTTGCAAAG 58.976 34.615 0.00 0.00 0.00 2.77
539 540 6.251376 GCTTAACTCGATATTTGTTGCAAAGG 59.749 38.462 0.00 0.00 0.00 3.11
540 541 4.096732 ACTCGATATTTGTTGCAAAGGC 57.903 40.909 0.00 0.00 41.68 4.35
541 542 3.758554 ACTCGATATTTGTTGCAAAGGCT 59.241 39.130 0.00 0.00 41.91 4.58
542 543 4.142600 ACTCGATATTTGTTGCAAAGGCTC 60.143 41.667 0.00 0.00 41.91 4.70
543 544 3.755905 TCGATATTTGTTGCAAAGGCTCA 59.244 39.130 0.00 0.00 41.91 4.26
544 545 4.217334 TCGATATTTGTTGCAAAGGCTCAA 59.783 37.500 0.00 0.00 41.91 3.02
545 546 4.324402 CGATATTTGTTGCAAAGGCTCAAC 59.676 41.667 0.00 9.85 41.99 3.18
546 547 1.919918 TTTGTTGCAAAGGCTCAACG 58.080 45.000 0.00 0.00 43.91 4.10
547 548 0.102120 TTGTTGCAAAGGCTCAACGG 59.898 50.000 0.00 0.00 43.91 4.44
548 549 1.661509 GTTGCAAAGGCTCAACGGC 60.662 57.895 0.00 0.00 41.91 5.68
555 556 3.744559 GGCTCAACGGCTCAACAA 58.255 55.556 0.00 0.00 34.85 2.83
556 557 2.029743 GGCTCAACGGCTCAACAAA 58.970 52.632 0.00 0.00 34.85 2.83
557 558 0.383949 GGCTCAACGGCTCAACAAAA 59.616 50.000 0.00 0.00 34.85 2.44
558 559 1.202359 GGCTCAACGGCTCAACAAAAA 60.202 47.619 0.00 0.00 34.85 1.94
559 560 1.852280 GCTCAACGGCTCAACAAAAAC 59.148 47.619 0.00 0.00 0.00 2.43
560 561 2.108700 CTCAACGGCTCAACAAAAACG 58.891 47.619 0.00 0.00 0.00 3.60
561 562 1.196200 CAACGGCTCAACAAAAACGG 58.804 50.000 0.00 0.00 0.00 4.44
562 563 0.101579 AACGGCTCAACAAAAACGGG 59.898 50.000 0.00 0.00 0.00 5.28
563 564 1.033202 ACGGCTCAACAAAAACGGGT 61.033 50.000 0.00 0.00 0.00 5.28
564 565 0.317519 CGGCTCAACAAAAACGGGTC 60.318 55.000 0.00 0.00 0.00 4.46
565 566 0.741915 GGCTCAACAAAAACGGGTCA 59.258 50.000 0.00 0.00 0.00 4.02
566 567 1.339929 GGCTCAACAAAAACGGGTCAT 59.660 47.619 0.00 0.00 0.00 3.06
567 568 2.393764 GCTCAACAAAAACGGGTCATG 58.606 47.619 0.00 0.00 0.00 3.07
568 569 2.223711 GCTCAACAAAAACGGGTCATGT 60.224 45.455 0.00 0.00 0.00 3.21
569 570 3.003897 GCTCAACAAAAACGGGTCATGTA 59.996 43.478 0.00 0.00 0.00 2.29
570 571 4.783242 CTCAACAAAAACGGGTCATGTAG 58.217 43.478 0.00 0.00 0.00 2.74
571 572 3.003897 TCAACAAAAACGGGTCATGTAGC 59.996 43.478 0.00 0.00 0.00 3.58
572 573 2.858745 ACAAAAACGGGTCATGTAGCT 58.141 42.857 0.00 0.00 0.00 3.32
573 574 4.010667 ACAAAAACGGGTCATGTAGCTA 57.989 40.909 0.00 0.00 0.00 3.32
574 575 4.585879 ACAAAAACGGGTCATGTAGCTAT 58.414 39.130 0.00 0.00 0.00 2.97
575 576 4.634443 ACAAAAACGGGTCATGTAGCTATC 59.366 41.667 0.00 0.00 0.00 2.08
576 577 4.755266 AAAACGGGTCATGTAGCTATCT 57.245 40.909 0.00 0.00 0.00 1.98
577 578 3.735237 AACGGGTCATGTAGCTATCTG 57.265 47.619 0.00 0.00 0.00 2.90
578 579 2.667470 ACGGGTCATGTAGCTATCTGT 58.333 47.619 0.00 0.00 0.00 3.41
579 580 2.362397 ACGGGTCATGTAGCTATCTGTG 59.638 50.000 0.00 0.00 0.00 3.66
580 581 2.288457 CGGGTCATGTAGCTATCTGTGG 60.288 54.545 0.00 0.00 0.00 4.17
581 582 2.548920 GGGTCATGTAGCTATCTGTGGC 60.549 54.545 0.00 0.00 0.00 5.01
582 583 2.366916 GGTCATGTAGCTATCTGTGGCT 59.633 50.000 0.00 0.00 44.99 4.75
583 584 3.181461 GGTCATGTAGCTATCTGTGGCTT 60.181 47.826 0.00 0.00 39.37 4.35
584 585 4.054671 GTCATGTAGCTATCTGTGGCTTC 58.945 47.826 0.00 0.00 39.37 3.86
585 586 3.706086 TCATGTAGCTATCTGTGGCTTCA 59.294 43.478 0.00 0.00 39.37 3.02
586 587 4.346127 TCATGTAGCTATCTGTGGCTTCAT 59.654 41.667 0.00 0.00 45.94 2.57
587 588 4.327982 TGTAGCTATCTGTGGCTTCATC 57.672 45.455 0.00 0.00 39.37 2.92
588 589 3.706086 TGTAGCTATCTGTGGCTTCATCA 59.294 43.478 0.00 0.00 39.37 3.07
589 590 3.920231 AGCTATCTGTGGCTTCATCAA 57.080 42.857 0.00 0.00 39.37 2.57
590 591 4.226427 AGCTATCTGTGGCTTCATCAAA 57.774 40.909 0.00 0.00 39.37 2.69
591 592 3.944015 AGCTATCTGTGGCTTCATCAAAC 59.056 43.478 0.00 0.00 39.37 2.93
592 593 3.691118 GCTATCTGTGGCTTCATCAAACA 59.309 43.478 0.00 0.00 0.00 2.83
593 594 4.201891 GCTATCTGTGGCTTCATCAAACAG 60.202 45.833 0.00 0.00 39.66 3.16
594 595 3.213206 TCTGTGGCTTCATCAAACAGT 57.787 42.857 0.00 0.00 39.39 3.55
595 596 4.350368 TCTGTGGCTTCATCAAACAGTA 57.650 40.909 0.00 0.00 39.39 2.74
596 597 4.318332 TCTGTGGCTTCATCAAACAGTAG 58.682 43.478 0.00 0.00 39.39 2.57
597 598 4.067896 CTGTGGCTTCATCAAACAGTAGT 58.932 43.478 0.00 0.00 34.81 2.73
598 599 4.460263 TGTGGCTTCATCAAACAGTAGTT 58.540 39.130 0.00 0.00 40.40 2.24
599 600 4.515191 TGTGGCTTCATCAAACAGTAGTTC 59.485 41.667 0.00 0.00 36.84 3.01
600 601 3.745975 TGGCTTCATCAAACAGTAGTTCG 59.254 43.478 0.00 0.00 36.84 3.95
601 602 3.125316 GGCTTCATCAAACAGTAGTTCGG 59.875 47.826 0.00 0.00 36.84 4.30
602 603 3.125316 GCTTCATCAAACAGTAGTTCGGG 59.875 47.826 0.00 0.00 36.84 5.14
603 604 2.695359 TCATCAAACAGTAGTTCGGGC 58.305 47.619 0.00 0.00 36.84 6.13
604 605 1.393539 CATCAAACAGTAGTTCGGGCG 59.606 52.381 0.00 0.00 36.84 6.13
605 606 0.320073 TCAAACAGTAGTTCGGGCGG 60.320 55.000 0.00 0.00 36.84 6.13
606 607 0.601841 CAAACAGTAGTTCGGGCGGT 60.602 55.000 0.00 0.00 36.84 5.68
607 608 0.107268 AAACAGTAGTTCGGGCGGTT 59.893 50.000 0.00 0.00 36.84 4.44
608 609 0.601841 AACAGTAGTTCGGGCGGTTG 60.602 55.000 0.00 0.00 30.46 3.77
609 610 1.290955 CAGTAGTTCGGGCGGTTGA 59.709 57.895 0.00 0.00 0.00 3.18
610 611 0.108329 CAGTAGTTCGGGCGGTTGAT 60.108 55.000 0.00 0.00 0.00 2.57
611 612 0.175073 AGTAGTTCGGGCGGTTGATC 59.825 55.000 0.00 0.00 0.00 2.92
612 613 0.175073 GTAGTTCGGGCGGTTGATCT 59.825 55.000 0.00 0.00 0.00 2.75
613 614 0.899720 TAGTTCGGGCGGTTGATCTT 59.100 50.000 0.00 0.00 0.00 2.40
614 615 0.036306 AGTTCGGGCGGTTGATCTTT 59.964 50.000 0.00 0.00 0.00 2.52
615 616 1.276989 AGTTCGGGCGGTTGATCTTTA 59.723 47.619 0.00 0.00 0.00 1.85
616 617 2.093128 AGTTCGGGCGGTTGATCTTTAT 60.093 45.455 0.00 0.00 0.00 1.40
617 618 1.948104 TCGGGCGGTTGATCTTTATG 58.052 50.000 0.00 0.00 0.00 1.90
618 619 1.483004 TCGGGCGGTTGATCTTTATGA 59.517 47.619 0.00 0.00 0.00 2.15
619 620 2.104111 TCGGGCGGTTGATCTTTATGAT 59.896 45.455 0.00 0.00 38.27 2.45
620 621 3.322541 TCGGGCGGTTGATCTTTATGATA 59.677 43.478 0.00 0.00 35.14 2.15
621 622 4.062293 CGGGCGGTTGATCTTTATGATAA 58.938 43.478 0.00 0.00 35.14 1.75
622 623 4.152402 CGGGCGGTTGATCTTTATGATAAG 59.848 45.833 0.00 0.00 35.14 1.73
623 624 4.455877 GGGCGGTTGATCTTTATGATAAGG 59.544 45.833 0.00 0.00 35.14 2.69
624 625 4.455877 GGCGGTTGATCTTTATGATAAGGG 59.544 45.833 0.00 0.00 35.14 3.95
625 626 5.305585 GCGGTTGATCTTTATGATAAGGGA 58.694 41.667 0.00 0.00 35.14 4.20
626 627 5.763204 GCGGTTGATCTTTATGATAAGGGAA 59.237 40.000 0.00 0.00 35.14 3.97
627 628 6.431234 GCGGTTGATCTTTATGATAAGGGAAT 59.569 38.462 0.00 0.00 35.14 3.01
628 629 7.361286 GCGGTTGATCTTTATGATAAGGGAATC 60.361 40.741 0.00 0.00 35.14 2.52
629 630 7.661437 CGGTTGATCTTTATGATAAGGGAATCA 59.339 37.037 0.00 0.00 40.07 2.57
630 631 9.354673 GGTTGATCTTTATGATAAGGGAATCAA 57.645 33.333 7.09 7.09 39.25 2.57
636 637 9.109393 TCTTTATGATAAGGGAATCAAAGAACG 57.891 33.333 0.00 0.00 39.25 3.95
637 638 8.801882 TTTATGATAAGGGAATCAAAGAACGT 57.198 30.769 0.00 0.00 39.25 3.99
638 639 8.801882 TTATGATAAGGGAATCAAAGAACGTT 57.198 30.769 0.00 0.00 39.25 3.99
639 640 6.737254 TGATAAGGGAATCAAAGAACGTTC 57.263 37.500 20.71 20.71 32.97 3.95
640 641 5.350365 TGATAAGGGAATCAAAGAACGTTCG 59.650 40.000 21.87 8.87 32.97 3.95
641 642 3.396260 AGGGAATCAAAGAACGTTCGA 57.604 42.857 21.87 13.94 0.00 3.71
642 643 3.326747 AGGGAATCAAAGAACGTTCGAG 58.673 45.455 21.87 15.38 0.00 4.04
643 644 3.006537 AGGGAATCAAAGAACGTTCGAGA 59.993 43.478 21.87 19.65 0.00 4.04
644 645 3.933332 GGGAATCAAAGAACGTTCGAGAT 59.067 43.478 21.87 20.82 0.00 2.75
645 646 4.033014 GGGAATCAAAGAACGTTCGAGATC 59.967 45.833 21.87 15.46 0.00 2.75
646 647 4.625742 GGAATCAAAGAACGTTCGAGATCA 59.374 41.667 21.87 6.43 0.00 2.92
647 648 5.292101 GGAATCAAAGAACGTTCGAGATCAT 59.708 40.000 21.87 12.05 0.00 2.45
648 649 5.709011 ATCAAAGAACGTTCGAGATCATG 57.291 39.130 21.87 13.56 0.00 3.07
649 650 4.556233 TCAAAGAACGTTCGAGATCATGT 58.444 39.130 21.87 0.00 0.00 3.21
650 651 4.621460 TCAAAGAACGTTCGAGATCATGTC 59.379 41.667 21.87 0.00 0.00 3.06
651 652 3.850122 AGAACGTTCGAGATCATGTCA 57.150 42.857 21.87 0.00 0.00 3.58
652 653 4.174411 AGAACGTTCGAGATCATGTCAA 57.826 40.909 21.87 0.00 0.00 3.18
653 654 4.556233 AGAACGTTCGAGATCATGTCAAA 58.444 39.130 21.87 0.00 0.00 2.69
654 655 4.988540 AGAACGTTCGAGATCATGTCAAAA 59.011 37.500 21.87 0.00 0.00 2.44
655 656 5.465390 AGAACGTTCGAGATCATGTCAAAAA 59.535 36.000 21.87 0.00 0.00 1.94
656 657 5.269459 ACGTTCGAGATCATGTCAAAAAG 57.731 39.130 0.00 0.00 0.00 2.27
657 658 4.988540 ACGTTCGAGATCATGTCAAAAAGA 59.011 37.500 0.00 0.00 0.00 2.52
658 659 5.465390 ACGTTCGAGATCATGTCAAAAAGAA 59.535 36.000 0.00 0.00 0.00 2.52
659 660 6.018262 ACGTTCGAGATCATGTCAAAAAGAAA 60.018 34.615 0.00 0.00 0.00 2.52
660 661 6.850823 CGTTCGAGATCATGTCAAAAAGAAAA 59.149 34.615 0.00 0.00 0.00 2.29
661 662 7.375808 CGTTCGAGATCATGTCAAAAAGAAAAA 59.624 33.333 0.00 0.00 0.00 1.94
662 663 8.685536 GTTCGAGATCATGTCAAAAAGAAAAAG 58.314 33.333 0.00 0.00 0.00 2.27
663 664 7.930217 TCGAGATCATGTCAAAAAGAAAAAGT 58.070 30.769 0.00 0.00 0.00 2.66
664 665 8.405531 TCGAGATCATGTCAAAAAGAAAAAGTT 58.594 29.630 0.00 0.00 0.00 2.66
665 666 8.685536 CGAGATCATGTCAAAAAGAAAAAGTTC 58.314 33.333 0.00 0.00 0.00 3.01
666 667 8.566008 AGATCATGTCAAAAAGAAAAAGTTCG 57.434 30.769 0.00 0.00 38.90 3.95
667 668 8.405531 AGATCATGTCAAAAAGAAAAAGTTCGA 58.594 29.630 0.00 0.00 38.90 3.71
668 669 9.185192 GATCATGTCAAAAAGAAAAAGTTCGAT 57.815 29.630 0.00 0.00 38.90 3.59
669 670 8.925161 TCATGTCAAAAAGAAAAAGTTCGATT 57.075 26.923 0.00 0.00 38.90 3.34
670 671 9.364989 TCATGTCAAAAAGAAAAAGTTCGATTT 57.635 25.926 0.00 0.00 38.90 2.17
708 709 3.364889 ACACGTTCGAGATCAGTTTGA 57.635 42.857 0.00 0.00 0.00 2.69
739 740 1.909700 TCAAGAGGGTTTCCACATGC 58.090 50.000 0.00 0.00 34.83 4.06
785 786 0.824182 CGTATCCCTCGCCTCTTCCT 60.824 60.000 0.00 0.00 0.00 3.36
793 794 1.045350 TCGCCTCTTCCTCATCAGGG 61.045 60.000 0.00 0.00 40.80 4.45
816 817 0.104855 TAGCTGCATCGACCATCACC 59.895 55.000 1.02 0.00 0.00 4.02
830 831 4.091549 ACCATCACCAATCTCAAAGCATT 58.908 39.130 0.00 0.00 0.00 3.56
852 854 0.539669 GCCCACAAGCAAACCCTAGT 60.540 55.000 0.00 0.00 0.00 2.57
854 856 1.156736 CCACAAGCAAACCCTAGTCG 58.843 55.000 0.00 0.00 0.00 4.18
984 989 1.596895 GCCTCGTCGGAGTTCTTCCT 61.597 60.000 0.00 0.00 44.41 3.36
1019 1024 4.867599 GGGGTAAGCTCGCCGTCG 62.868 72.222 0.00 0.00 0.00 5.12
1048 1053 4.222336 TCCAGTTGATTTTCCATGGTTGT 58.778 39.130 12.58 0.00 0.00 3.32
1154 1159 4.308265 GTTAGATTAGACCGGCCAGATTC 58.692 47.826 0.00 0.00 0.00 2.52
1164 1169 2.467826 GCCAGATTCTCACTGCGCC 61.468 63.158 4.18 0.00 34.47 6.53
1438 1451 1.674359 ATGAAAGTCCGTGCACAACA 58.326 45.000 18.64 5.91 0.00 3.33
1524 1537 7.394816 GTGGCCCTTATTTTCTAGATATAGCA 58.605 38.462 0.00 0.00 0.00 3.49
1572 1585 2.346766 ACTGTTGTGATGCAGACCAA 57.653 45.000 0.00 0.00 36.62 3.67
1849 1862 8.232913 TGTTTTTATGGGGTGAAGCTAATATC 57.767 34.615 0.00 0.00 0.00 1.63
2023 2049 6.024552 TCCATCTTGGTACTTTTCAAATGC 57.975 37.500 0.00 0.00 39.03 3.56
2104 2201 0.104304 CTGGATTCGGTCGTAAGGGG 59.896 60.000 0.00 0.00 38.47 4.79
2263 2361 4.195416 GCCTTTAGATGTTGAAGGAGGAG 58.805 47.826 5.59 0.00 41.97 3.69
2264 2362 4.775236 CCTTTAGATGTTGAAGGAGGAGG 58.225 47.826 0.00 0.00 41.97 4.30
2265 2363 4.384647 CCTTTAGATGTTGAAGGAGGAGGG 60.385 50.000 0.00 0.00 41.97 4.30
2332 2430 2.552315 CGTGTTGGTGAAAACTATGCCT 59.448 45.455 0.00 0.00 0.00 4.75
2373 2471 4.819630 TGTTAAGGGAAAGTGCTACTGTTG 59.180 41.667 0.00 0.00 0.00 3.33
2424 2526 1.428912 TCCCTTGTCCTGAAATTGCCT 59.571 47.619 0.00 0.00 0.00 4.75
2443 2545 2.178580 CTTGGGCATTGGTGGTGTATT 58.821 47.619 0.00 0.00 0.00 1.89
2456 2558 6.071984 TGGTGGTGTATTTAGAATTTGGTGT 58.928 36.000 0.00 0.00 0.00 4.16
2469 2571 5.874261 AGAATTTGGTGTTGTTTGTTTCAGG 59.126 36.000 0.00 0.00 0.00 3.86
2471 2573 3.584406 TGGTGTTGTTTGTTTCAGGTG 57.416 42.857 0.00 0.00 0.00 4.00
2526 2630 8.819974 ACAAACAGTTATTTTGAATCAGCTTTG 58.180 29.630 1.97 0.00 37.39 2.77
2527 2631 9.033481 CAAACAGTTATTTTGAATCAGCTTTGA 57.967 29.630 0.00 0.00 36.24 2.69
2562 2671 0.975040 TTTGGGTTTGCCAGCACAGT 60.975 50.000 0.00 0.00 36.17 3.55
2582 2697 2.119801 AATCCGCAGCTGATTCTGTT 57.880 45.000 20.43 0.63 36.49 3.16
2584 2699 0.674581 TCCGCAGCTGATTCTGTTGG 60.675 55.000 20.43 5.20 36.49 3.77
2599 2714 1.260544 GTTGGAGCTGAAGCCCAAAT 58.739 50.000 20.06 0.00 45.76 2.32
2638 2753 4.766891 CACCAAATCTCAACCTAATGTGGT 59.233 41.667 0.00 0.00 40.87 4.16
2639 2754 4.766891 ACCAAATCTCAACCTAATGTGGTG 59.233 41.667 0.00 0.00 39.14 4.17
2661 2788 1.956477 GGTGGCTGTGTTTGATCTGTT 59.044 47.619 0.00 0.00 0.00 3.16
2667 2794 4.060900 GCTGTGTTTGATCTGTTCTCTCA 58.939 43.478 0.00 0.00 0.00 3.27
2668 2795 4.084118 GCTGTGTTTGATCTGTTCTCTCAC 60.084 45.833 0.00 0.00 0.00 3.51
2679 2806 0.888619 TTCTCTCACGTAGGTGGCTG 59.111 55.000 15.15 6.73 44.50 4.85
2680 2807 0.251209 TCTCTCACGTAGGTGGCTGT 60.251 55.000 15.15 0.00 44.50 4.40
2681 2808 0.109086 CTCTCACGTAGGTGGCTGTG 60.109 60.000 15.15 4.38 44.50 3.66
2726 3366 2.526304 TACATGTATCGCTGAAGCCC 57.474 50.000 0.08 0.00 37.91 5.19
2792 3432 4.059511 TGCATGCTTGGATGAAAAACTTG 58.940 39.130 20.33 0.00 0.00 3.16
2793 3433 3.434299 GCATGCTTGGATGAAAAACTTGG 59.566 43.478 11.37 0.00 0.00 3.61
2794 3434 3.110447 TGCTTGGATGAAAAACTTGGC 57.890 42.857 0.00 0.00 0.00 4.52
2802 3442 3.641437 TGAAAAACTTGGCGGAATGAG 57.359 42.857 0.00 0.00 0.00 2.90
2805 3445 0.251341 AAACTTGGCGGAATGAGGCT 60.251 50.000 0.00 0.00 35.01 4.58
2822 3462 4.892934 TGAGGCTGTTCCAGTTAACATTTT 59.107 37.500 8.61 0.00 38.61 1.82
2831 3471 8.364142 TGTTCCAGTTAACATTTTCCTTTATGG 58.636 33.333 8.61 2.24 34.50 2.74
2834 3474 7.177744 TCCAGTTAACATTTTCCTTTATGGACC 59.822 37.037 8.61 0.00 46.14 4.46
2841 3481 7.189087 ACATTTTCCTTTATGGACCCTAATGT 58.811 34.615 0.00 0.00 46.14 2.71
2854 3494 2.169769 CCCTAATGTCCAGCGAACCTTA 59.830 50.000 0.00 0.00 0.00 2.69
2856 3496 2.851263 AATGTCCAGCGAACCTTACA 57.149 45.000 0.00 0.00 0.00 2.41
2857 3497 3.350219 AATGTCCAGCGAACCTTACAT 57.650 42.857 0.00 0.00 31.90 2.29
2859 3499 3.520290 TGTCCAGCGAACCTTACATAG 57.480 47.619 0.00 0.00 0.00 2.23
2875 3515 7.502120 CTTACATAGGAAGGGATGACATTTG 57.498 40.000 0.00 0.00 0.00 2.32
2876 3516 4.210331 ACATAGGAAGGGATGACATTTGC 58.790 43.478 0.00 0.00 0.00 3.68
2877 3517 2.905415 AGGAAGGGATGACATTTGCA 57.095 45.000 0.00 0.00 0.00 4.08
2881 3521 3.006752 GGAAGGGATGACATTTGCAAACA 59.993 43.478 15.41 8.78 0.00 2.83
2885 3525 5.240121 AGGGATGACATTTGCAAACATTTC 58.760 37.500 15.41 8.88 0.00 2.17
2890 3530 4.809958 TGACATTTGCAAACATTTCCACTG 59.190 37.500 15.41 8.01 0.00 3.66
2892 3532 2.237393 TTGCAAACATTTCCACTGGC 57.763 45.000 0.00 0.00 0.00 4.85
2898 3538 4.190772 CAAACATTTCCACTGGCAGTTTT 58.809 39.130 19.43 11.28 0.00 2.43
2899 3539 5.355596 CAAACATTTCCACTGGCAGTTTTA 58.644 37.500 19.43 3.08 0.00 1.52
2900 3540 4.853924 ACATTTCCACTGGCAGTTTTAG 57.146 40.909 19.43 6.56 0.00 1.85
2905 3545 7.668052 ACATTTCCACTGGCAGTTTTAGTTATA 59.332 33.333 19.43 0.00 0.00 0.98
2909 3549 7.455058 TCCACTGGCAGTTTTAGTTATAAAGA 58.545 34.615 19.43 0.00 32.58 2.52
2937 3577 8.156820 TGACATTTTCTTTAGAAGAGGATGACA 58.843 33.333 15.82 13.81 39.03 3.58
2950 3590 9.386122 AGAAGAGGATGACAGTTTATGGTATAT 57.614 33.333 0.00 0.00 0.00 0.86
2953 3593 9.830186 AGAGGATGACAGTTTATGGTATATACT 57.170 33.333 12.54 0.00 0.00 2.12
2999 3798 8.443953 AAGCTATCACTTCCTGATTTACATTC 57.556 34.615 0.00 0.00 40.38 2.67
3019 3818 4.479156 TCCCCAGTTAACATTTCCCTTT 57.521 40.909 8.61 0.00 0.00 3.11
3021 3820 6.160483 TCCCCAGTTAACATTTCCCTTTAT 57.840 37.500 8.61 0.00 0.00 1.40
3167 3969 8.230486 GCTATGATCGTAAATCCCTTGTAATTG 58.770 37.037 0.00 0.00 0.00 2.32
3168 3970 6.935741 TGATCGTAAATCCCTTGTAATTGG 57.064 37.500 0.00 0.00 0.00 3.16
3169 3971 6.654959 TGATCGTAAATCCCTTGTAATTGGA 58.345 36.000 0.00 0.00 0.00 3.53
3170 3972 7.287061 TGATCGTAAATCCCTTGTAATTGGAT 58.713 34.615 0.00 0.00 40.60 3.41
3171 3973 7.444183 TGATCGTAAATCCCTTGTAATTGGATC 59.556 37.037 0.00 0.00 37.92 3.36
3172 3974 5.756347 TCGTAAATCCCTTGTAATTGGATCG 59.244 40.000 0.00 0.00 37.92 3.69
3173 3975 5.756347 CGTAAATCCCTTGTAATTGGATCGA 59.244 40.000 0.00 0.00 37.92 3.59
3174 3976 6.426937 CGTAAATCCCTTGTAATTGGATCGAT 59.573 38.462 0.00 0.00 37.92 3.59
3175 3977 6.639632 AAATCCCTTGTAATTGGATCGATG 57.360 37.500 0.54 0.00 37.92 3.84
3176 3978 5.567037 ATCCCTTGTAATTGGATCGATGA 57.433 39.130 0.54 0.00 33.61 2.92
3177 3979 4.960938 TCCCTTGTAATTGGATCGATGAG 58.039 43.478 0.54 0.00 0.00 2.90
3178 3980 4.653801 TCCCTTGTAATTGGATCGATGAGA 59.346 41.667 0.54 0.00 0.00 3.27
3179 3981 4.752101 CCCTTGTAATTGGATCGATGAGAC 59.248 45.833 0.54 0.00 0.00 3.36
3180 3982 5.359756 CCTTGTAATTGGATCGATGAGACA 58.640 41.667 0.54 0.00 0.00 3.41
3181 3983 5.235186 CCTTGTAATTGGATCGATGAGACAC 59.765 44.000 0.54 0.00 0.00 3.67
3182 3984 5.598416 TGTAATTGGATCGATGAGACACT 57.402 39.130 0.54 0.00 0.00 3.55
3183 3985 6.709018 TGTAATTGGATCGATGAGACACTA 57.291 37.500 0.54 0.00 0.00 2.74
3184 3986 6.739112 TGTAATTGGATCGATGAGACACTAG 58.261 40.000 0.54 0.00 0.00 2.57
3185 3987 3.717400 TTGGATCGATGAGACACTAGC 57.283 47.619 0.54 0.00 0.00 3.42
3186 3988 2.937519 TGGATCGATGAGACACTAGCT 58.062 47.619 0.54 0.00 0.00 3.32
3187 3989 2.881513 TGGATCGATGAGACACTAGCTC 59.118 50.000 0.54 0.00 0.00 4.09
3188 3990 3.146066 GGATCGATGAGACACTAGCTCT 58.854 50.000 0.54 0.00 33.57 4.09
3189 3991 4.202367 TGGATCGATGAGACACTAGCTCTA 60.202 45.833 0.54 0.00 33.57 2.43
3190 3992 4.941263 GGATCGATGAGACACTAGCTCTAT 59.059 45.833 0.54 0.00 33.57 1.98
3191 3993 5.414454 GGATCGATGAGACACTAGCTCTATT 59.586 44.000 0.54 0.00 33.57 1.73
3192 3994 6.596106 GGATCGATGAGACACTAGCTCTATTA 59.404 42.308 0.54 0.00 33.57 0.98
3193 3995 7.282224 GGATCGATGAGACACTAGCTCTATTAT 59.718 40.741 0.54 0.00 33.57 1.28
3194 3996 7.987750 TCGATGAGACACTAGCTCTATTATT 57.012 36.000 0.00 0.00 33.57 1.40
3195 3997 8.035165 TCGATGAGACACTAGCTCTATTATTC 57.965 38.462 0.00 0.00 33.57 1.75
3196 3998 7.661847 TCGATGAGACACTAGCTCTATTATTCA 59.338 37.037 0.00 0.00 33.57 2.57
3197 3999 8.458052 CGATGAGACACTAGCTCTATTATTCAT 58.542 37.037 0.00 0.00 33.57 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.512926 CACCTTCAACACCCTCTTCG 58.487 55.000 0.00 0.00 0.00 3.79
1 2 1.420138 TCCACCTTCAACACCCTCTTC 59.580 52.381 0.00 0.00 0.00 2.87
2 3 1.143073 GTCCACCTTCAACACCCTCTT 59.857 52.381 0.00 0.00 0.00 2.85
3 4 0.765510 GTCCACCTTCAACACCCTCT 59.234 55.000 0.00 0.00 0.00 3.69
4 5 0.472471 TGTCCACCTTCAACACCCTC 59.528 55.000 0.00 0.00 0.00 4.30
5 6 0.474184 CTGTCCACCTTCAACACCCT 59.526 55.000 0.00 0.00 0.00 4.34
6 7 0.537371 CCTGTCCACCTTCAACACCC 60.537 60.000 0.00 0.00 0.00 4.61
7 8 0.472471 TCCTGTCCACCTTCAACACC 59.528 55.000 0.00 0.00 0.00 4.16
8 9 2.158813 TCTTCCTGTCCACCTTCAACAC 60.159 50.000 0.00 0.00 0.00 3.32
9 10 2.104792 CTCTTCCTGTCCACCTTCAACA 59.895 50.000 0.00 0.00 0.00 3.33
10 11 2.551071 CCTCTTCCTGTCCACCTTCAAC 60.551 54.545 0.00 0.00 0.00 3.18
11 12 1.699634 CCTCTTCCTGTCCACCTTCAA 59.300 52.381 0.00 0.00 0.00 2.69
12 13 1.352083 CCTCTTCCTGTCCACCTTCA 58.648 55.000 0.00 0.00 0.00 3.02
13 14 1.002544 CACCTCTTCCTGTCCACCTTC 59.997 57.143 0.00 0.00 0.00 3.46
14 15 1.059913 CACCTCTTCCTGTCCACCTT 58.940 55.000 0.00 0.00 0.00 3.50
15 16 0.838122 CCACCTCTTCCTGTCCACCT 60.838 60.000 0.00 0.00 0.00 4.00
16 17 1.679898 CCACCTCTTCCTGTCCACC 59.320 63.158 0.00 0.00 0.00 4.61
17 18 1.679898 CCCACCTCTTCCTGTCCAC 59.320 63.158 0.00 0.00 0.00 4.02
18 19 1.538876 CCCCACCTCTTCCTGTCCA 60.539 63.158 0.00 0.00 0.00 4.02
19 20 2.972819 GCCCCACCTCTTCCTGTCC 61.973 68.421 0.00 0.00 0.00 4.02
20 21 2.671682 GCCCCACCTCTTCCTGTC 59.328 66.667 0.00 0.00 0.00 3.51
21 22 3.322466 CGCCCCACCTCTTCCTGT 61.322 66.667 0.00 0.00 0.00 4.00
22 23 4.101448 CCGCCCCACCTCTTCCTG 62.101 72.222 0.00 0.00 0.00 3.86
45 46 4.816984 TCTCCGTCCTCCGCCTCC 62.817 72.222 0.00 0.00 34.38 4.30
46 47 3.213402 CTCTCCGTCCTCCGCCTC 61.213 72.222 0.00 0.00 34.38 4.70
47 48 4.824515 CCTCTCCGTCCTCCGCCT 62.825 72.222 0.00 0.00 34.38 5.52
48 49 4.816984 TCCTCTCCGTCCTCCGCC 62.817 72.222 0.00 0.00 34.38 6.13
49 50 3.213402 CTCCTCTCCGTCCTCCGC 61.213 72.222 0.00 0.00 34.38 5.54
50 51 3.213402 GCTCCTCTCCGTCCTCCG 61.213 72.222 0.00 0.00 0.00 4.63
51 52 2.043852 TGCTCCTCTCCGTCCTCC 60.044 66.667 0.00 0.00 0.00 4.30
52 53 2.781158 GCTGCTCCTCTCCGTCCTC 61.781 68.421 0.00 0.00 0.00 3.71
53 54 2.757917 GCTGCTCCTCTCCGTCCT 60.758 66.667 0.00 0.00 0.00 3.85
54 55 3.071206 TGCTGCTCCTCTCCGTCC 61.071 66.667 0.00 0.00 0.00 4.79
55 56 2.493973 CTGCTGCTCCTCTCCGTC 59.506 66.667 0.00 0.00 0.00 4.79
56 57 3.073735 CCTGCTGCTCCTCTCCGT 61.074 66.667 0.00 0.00 0.00 4.69
57 58 2.757508 TCCTGCTGCTCCTCTCCG 60.758 66.667 0.00 0.00 0.00 4.63
58 59 2.433994 CCTCCTGCTGCTCCTCTCC 61.434 68.421 0.00 0.00 0.00 3.71
59 60 1.381056 TCCTCCTGCTGCTCCTCTC 60.381 63.158 0.00 0.00 0.00 3.20
60 61 1.381599 CTCCTCCTGCTGCTCCTCT 60.382 63.158 0.00 0.00 0.00 3.69
61 62 2.433994 CCTCCTCCTGCTGCTCCTC 61.434 68.421 0.00 0.00 0.00 3.71
62 63 2.365370 CCTCCTCCTGCTGCTCCT 60.365 66.667 0.00 0.00 0.00 3.69
63 64 2.364842 TCCTCCTCCTGCTGCTCC 60.365 66.667 0.00 0.00 0.00 4.70
64 65 3.092780 GCTCCTCCTCCTGCTGCTC 62.093 68.421 0.00 0.00 0.00 4.26
65 66 3.082701 GCTCCTCCTCCTGCTGCT 61.083 66.667 0.00 0.00 0.00 4.24
66 67 4.173924 GGCTCCTCCTCCTGCTGC 62.174 72.222 0.00 0.00 0.00 5.25
67 68 3.847602 CGGCTCCTCCTCCTGCTG 61.848 72.222 0.00 0.00 0.00 4.41
120 121 4.735132 TTTCTCCCCACGCGCTCG 62.735 66.667 5.73 0.00 42.43 5.03
121 122 2.125106 ATTTCTCCCCACGCGCTC 60.125 61.111 5.73 0.00 0.00 5.03
122 123 2.125106 GATTTCTCCCCACGCGCT 60.125 61.111 5.73 0.00 0.00 5.92
123 124 2.435938 TGATTTCTCCCCACGCGC 60.436 61.111 5.73 0.00 0.00 6.86
124 125 2.106683 GGTGATTTCTCCCCACGCG 61.107 63.158 3.53 3.53 0.00 6.01
125 126 2.106683 CGGTGATTTCTCCCCACGC 61.107 63.158 0.00 0.00 0.00 5.34
126 127 1.449601 CCGGTGATTTCTCCCCACG 60.450 63.158 0.00 0.00 0.00 4.94
127 128 0.107654 CTCCGGTGATTTCTCCCCAC 60.108 60.000 0.00 0.00 0.00 4.61
128 129 1.271840 CCTCCGGTGATTTCTCCCCA 61.272 60.000 4.76 0.00 0.00 4.96
129 130 1.527370 CCTCCGGTGATTTCTCCCC 59.473 63.158 4.76 0.00 0.00 4.81
130 131 0.981277 TCCCTCCGGTGATTTCTCCC 60.981 60.000 4.76 0.00 0.00 4.30
131 132 0.466124 CTCCCTCCGGTGATTTCTCC 59.534 60.000 4.76 0.00 0.00 3.71
132 133 1.486211 TCTCCCTCCGGTGATTTCTC 58.514 55.000 4.76 0.00 0.00 2.87
133 134 2.043227 GATCTCCCTCCGGTGATTTCT 58.957 52.381 4.76 0.00 41.46 2.52
134 135 1.070914 GGATCTCCCTCCGGTGATTTC 59.929 57.143 4.76 0.00 41.46 2.17
135 136 1.132500 GGATCTCCCTCCGGTGATTT 58.868 55.000 4.76 0.00 41.46 2.17
136 137 2.841595 GGATCTCCCTCCGGTGATT 58.158 57.895 4.76 0.00 41.46 2.57
137 138 4.629442 GGATCTCCCTCCGGTGAT 57.371 61.111 4.76 1.00 43.56 3.06
143 144 1.465200 GCAGGTACGGATCTCCCTCC 61.465 65.000 0.00 0.00 0.00 4.30
144 145 0.468400 AGCAGGTACGGATCTCCCTC 60.468 60.000 0.00 0.00 0.00 4.30
145 146 0.032017 AAGCAGGTACGGATCTCCCT 60.032 55.000 0.00 0.00 0.00 4.20
146 147 0.105039 CAAGCAGGTACGGATCTCCC 59.895 60.000 0.00 0.00 0.00 4.30
147 148 0.105039 CCAAGCAGGTACGGATCTCC 59.895 60.000 0.00 0.00 0.00 3.71
148 149 1.112113 TCCAAGCAGGTACGGATCTC 58.888 55.000 0.00 0.00 39.02 2.75
149 150 1.794714 ATCCAAGCAGGTACGGATCT 58.205 50.000 0.00 0.00 32.71 2.75
150 151 2.213499 CAATCCAAGCAGGTACGGATC 58.787 52.381 4.37 0.00 37.27 3.36
151 152 1.559682 ACAATCCAAGCAGGTACGGAT 59.440 47.619 0.00 0.00 40.01 4.18
152 153 0.981183 ACAATCCAAGCAGGTACGGA 59.019 50.000 0.00 0.00 39.02 4.69
153 154 1.369625 GACAATCCAAGCAGGTACGG 58.630 55.000 0.00 0.00 39.02 4.02
154 155 0.999406 CGACAATCCAAGCAGGTACG 59.001 55.000 0.00 0.00 39.02 3.67
155 156 1.369625 CCGACAATCCAAGCAGGTAC 58.630 55.000 0.00 0.00 39.02 3.34
156 157 0.392461 GCCGACAATCCAAGCAGGTA 60.392 55.000 0.00 0.00 39.02 3.08
157 158 1.675641 GCCGACAATCCAAGCAGGT 60.676 57.895 0.00 0.00 39.02 4.00
158 159 2.753966 CGCCGACAATCCAAGCAGG 61.754 63.158 0.00 0.00 39.47 4.85
159 160 1.741401 TCGCCGACAATCCAAGCAG 60.741 57.895 0.00 0.00 0.00 4.24
160 161 2.032634 GTCGCCGACAATCCAAGCA 61.033 57.895 13.23 0.00 32.09 3.91
161 162 2.750888 GGTCGCCGACAATCCAAGC 61.751 63.158 20.08 0.00 33.68 4.01
162 163 3.486263 GGTCGCCGACAATCCAAG 58.514 61.111 20.08 0.00 33.68 3.61
183 184 4.430765 TTCGTCTTCGGGAGCGGC 62.431 66.667 0.00 0.00 37.69 6.53
184 185 2.202623 CTTCGTCTTCGGGAGCGG 60.203 66.667 1.34 0.00 37.69 5.52
185 186 1.080705 AACTTCGTCTTCGGGAGCG 60.081 57.895 0.00 0.00 37.69 5.03
186 187 0.319641 ACAACTTCGTCTTCGGGAGC 60.320 55.000 0.00 0.00 37.69 4.70
187 188 1.699343 GACAACTTCGTCTTCGGGAG 58.301 55.000 0.00 0.00 37.69 4.30
188 189 0.039798 CGACAACTTCGTCTTCGGGA 60.040 55.000 0.00 0.00 43.24 5.14
189 190 2.431539 CGACAACTTCGTCTTCGGG 58.568 57.895 0.00 0.00 43.24 5.14
198 199 2.654912 CCGCCGTGACGACAACTTC 61.655 63.158 6.54 0.00 34.06 3.01
199 200 2.074230 TACCGCCGTGACGACAACTT 62.074 55.000 6.54 0.00 34.06 2.66
200 201 2.467946 CTACCGCCGTGACGACAACT 62.468 60.000 6.54 0.00 34.06 3.16
201 202 2.050168 TACCGCCGTGACGACAAC 60.050 61.111 6.54 0.00 34.06 3.32
202 203 2.256158 CTACCGCCGTGACGACAA 59.744 61.111 6.54 0.00 34.06 3.18
203 204 3.740397 CCTACCGCCGTGACGACA 61.740 66.667 6.54 0.00 34.06 4.35
204 205 1.922135 TAACCTACCGCCGTGACGAC 61.922 60.000 6.54 0.00 34.06 4.34
205 206 1.647545 CTAACCTACCGCCGTGACGA 61.648 60.000 6.54 0.00 34.06 4.20
206 207 1.226491 CTAACCTACCGCCGTGACG 60.226 63.158 0.00 0.00 0.00 4.35
207 208 1.517913 GCTAACCTACCGCCGTGAC 60.518 63.158 0.00 0.00 0.00 3.67
208 209 2.713967 GGCTAACCTACCGCCGTGA 61.714 63.158 0.00 0.00 33.64 4.35
209 210 2.202837 GGCTAACCTACCGCCGTG 60.203 66.667 0.00 0.00 33.64 4.94
210 211 3.464494 GGGCTAACCTACCGCCGT 61.464 66.667 0.00 0.00 44.68 5.68
211 212 4.231439 GGGGCTAACCTACCGCCG 62.231 72.222 0.00 0.00 44.68 6.46
212 213 4.231439 CGGGGCTAACCTACCGCC 62.231 72.222 0.00 0.00 43.03 6.13
213 214 4.231439 CCGGGGCTAACCTACCGC 62.231 72.222 0.00 0.00 44.70 5.68
214 215 4.231439 GCCGGGGCTAACCTACCG 62.231 72.222 2.18 0.00 45.57 4.02
215 216 3.870190 GGCCGGGGCTAACCTACC 61.870 72.222 14.22 0.00 41.60 3.18
216 217 3.085296 TGGCCGGGGCTAACCTAC 61.085 66.667 22.12 0.00 41.60 3.18
217 218 3.085296 GTGGCCGGGGCTAACCTA 61.085 66.667 22.12 0.00 41.60 3.08
239 240 3.554342 CTGGATCTGGGAGGGCGG 61.554 72.222 0.00 0.00 0.00 6.13
240 241 2.444706 TCTGGATCTGGGAGGGCG 60.445 66.667 0.00 0.00 0.00 6.13
241 242 2.447714 GGTCTGGATCTGGGAGGGC 61.448 68.421 0.00 0.00 0.00 5.19
242 243 0.762461 GAGGTCTGGATCTGGGAGGG 60.762 65.000 0.00 0.00 0.00 4.30
243 244 1.112315 CGAGGTCTGGATCTGGGAGG 61.112 65.000 0.00 0.00 0.00 4.30
244 245 0.396417 ACGAGGTCTGGATCTGGGAG 60.396 60.000 0.00 0.00 0.00 4.30
245 246 0.395862 GACGAGGTCTGGATCTGGGA 60.396 60.000 0.00 0.00 0.00 4.37
246 247 1.729470 CGACGAGGTCTGGATCTGGG 61.729 65.000 0.00 0.00 0.00 4.45
247 248 1.730487 CGACGAGGTCTGGATCTGG 59.270 63.158 0.00 0.00 0.00 3.86
248 249 1.064946 GCGACGAGGTCTGGATCTG 59.935 63.158 0.00 0.00 0.00 2.90
249 250 2.122167 GGCGACGAGGTCTGGATCT 61.122 63.158 0.00 0.00 0.00 2.75
250 251 2.065906 GAGGCGACGAGGTCTGGATC 62.066 65.000 0.00 0.00 0.00 3.36
251 252 2.043852 AGGCGACGAGGTCTGGAT 60.044 61.111 0.00 0.00 0.00 3.41
252 253 2.750637 GAGGCGACGAGGTCTGGA 60.751 66.667 0.00 0.00 0.00 3.86
253 254 2.752238 AGAGGCGACGAGGTCTGG 60.752 66.667 0.00 0.00 0.00 3.86
254 255 2.766400 GGAGAGGCGACGAGGTCTG 61.766 68.421 0.00 0.00 0.00 3.51
255 256 2.438795 GGAGAGGCGACGAGGTCT 60.439 66.667 0.00 0.00 0.00 3.85
256 257 3.519930 GGGAGAGGCGACGAGGTC 61.520 72.222 0.00 0.00 0.00 3.85
257 258 3.881019 TTGGGAGAGGCGACGAGGT 62.881 63.158 0.00 0.00 0.00 3.85
258 259 2.356818 GATTGGGAGAGGCGACGAGG 62.357 65.000 0.00 0.00 0.00 4.63
259 260 1.066587 GATTGGGAGAGGCGACGAG 59.933 63.158 0.00 0.00 0.00 4.18
260 261 2.423898 GGATTGGGAGAGGCGACGA 61.424 63.158 0.00 0.00 0.00 4.20
261 262 2.107141 GGATTGGGAGAGGCGACG 59.893 66.667 0.00 0.00 0.00 5.12
262 263 1.144936 CTGGATTGGGAGAGGCGAC 59.855 63.158 0.00 0.00 0.00 5.19
263 264 2.735772 GCTGGATTGGGAGAGGCGA 61.736 63.158 0.00 0.00 0.00 5.54
264 265 2.203126 GCTGGATTGGGAGAGGCG 60.203 66.667 0.00 0.00 0.00 5.52
265 266 2.203126 CGCTGGATTGGGAGAGGC 60.203 66.667 0.00 0.00 0.00 4.70
266 267 1.445095 CTCGCTGGATTGGGAGAGG 59.555 63.158 3.00 0.00 45.98 3.69
267 268 1.227497 GCTCGCTGGATTGGGAGAG 60.227 63.158 11.77 0.00 45.98 3.20
268 269 1.989508 TGCTCGCTGGATTGGGAGA 60.990 57.895 11.77 0.00 45.98 3.71
269 270 1.817099 GTGCTCGCTGGATTGGGAG 60.817 63.158 0.00 0.00 45.89 4.30
270 271 1.913951 ATGTGCTCGCTGGATTGGGA 61.914 55.000 0.00 0.00 0.00 4.37
271 272 1.452651 ATGTGCTCGCTGGATTGGG 60.453 57.895 0.00 0.00 0.00 4.12
272 273 1.725665 CATGTGCTCGCTGGATTGG 59.274 57.895 0.00 0.00 0.00 3.16
273 274 1.063649 GCATGTGCTCGCTGGATTG 59.936 57.895 0.00 0.00 38.21 2.67
274 275 2.117156 GGCATGTGCTCGCTGGATT 61.117 57.895 4.84 0.00 41.70 3.01
275 276 2.515523 GGCATGTGCTCGCTGGAT 60.516 61.111 4.84 0.00 41.70 3.41
297 298 4.711949 ACGCCCCTGCAGCTGAAG 62.712 66.667 20.43 17.87 37.32 3.02
298 299 3.790416 AAACGCCCCTGCAGCTGAA 62.790 57.895 20.43 5.87 37.32 3.02
299 300 3.790416 AAAACGCCCCTGCAGCTGA 62.790 57.895 20.43 1.36 37.32 4.26
300 301 3.273080 GAAAACGCCCCTGCAGCTG 62.273 63.158 10.11 10.11 37.32 4.24
301 302 2.985847 GAAAACGCCCCTGCAGCT 60.986 61.111 8.66 0.00 37.32 4.24
302 303 4.056125 GGAAAACGCCCCTGCAGC 62.056 66.667 8.66 0.00 37.32 5.25
303 304 2.282462 AGGAAAACGCCCCTGCAG 60.282 61.111 6.78 6.78 37.32 4.41
304 305 2.597217 CAGGAAAACGCCCCTGCA 60.597 61.111 0.00 0.00 42.84 4.41
307 308 2.728397 GTTTCAGGAAAACGCCCCT 58.272 52.632 0.00 0.00 38.06 4.79
313 314 2.459934 CAGCCGTTGTTTCAGGAAAAC 58.540 47.619 0.00 0.00 46.22 2.43
314 315 1.407258 CCAGCCGTTGTTTCAGGAAAA 59.593 47.619 0.00 0.00 31.33 2.29
315 316 1.028905 CCAGCCGTTGTTTCAGGAAA 58.971 50.000 0.00 0.00 0.00 3.13
316 317 0.181587 TCCAGCCGTTGTTTCAGGAA 59.818 50.000 0.00 0.00 0.00 3.36
317 318 0.181587 TTCCAGCCGTTGTTTCAGGA 59.818 50.000 0.00 0.00 0.00 3.86
318 319 1.028905 TTTCCAGCCGTTGTTTCAGG 58.971 50.000 0.00 0.00 0.00 3.86
319 320 2.459934 GTTTTCCAGCCGTTGTTTCAG 58.540 47.619 0.00 0.00 0.00 3.02
320 321 1.202200 CGTTTTCCAGCCGTTGTTTCA 60.202 47.619 0.00 0.00 0.00 2.69
321 322 1.064357 TCGTTTTCCAGCCGTTGTTTC 59.936 47.619 0.00 0.00 0.00 2.78
322 323 1.096416 TCGTTTTCCAGCCGTTGTTT 58.904 45.000 0.00 0.00 0.00 2.83
323 324 1.096416 TTCGTTTTCCAGCCGTTGTT 58.904 45.000 0.00 0.00 0.00 2.83
324 325 0.379316 GTTCGTTTTCCAGCCGTTGT 59.621 50.000 0.00 0.00 0.00 3.32
325 326 0.656205 CGTTCGTTTTCCAGCCGTTG 60.656 55.000 0.00 0.00 0.00 4.10
326 327 1.644913 CGTTCGTTTTCCAGCCGTT 59.355 52.632 0.00 0.00 0.00 4.44
327 328 2.888998 GCGTTCGTTTTCCAGCCGT 61.889 57.895 0.00 0.00 0.00 5.68
328 329 2.127383 GCGTTCGTTTTCCAGCCG 60.127 61.111 0.00 0.00 0.00 5.52
329 330 2.127383 CGCGTTCGTTTTCCAGCC 60.127 61.111 0.00 0.00 0.00 4.85
330 331 2.795389 GCGCGTTCGTTTTCCAGC 60.795 61.111 8.43 0.00 38.14 4.85
331 332 2.496794 CGCGCGTTCGTTTTCCAG 60.497 61.111 24.19 0.00 38.14 3.86
332 333 3.263422 ACGCGCGTTCGTTTTCCA 61.263 55.556 32.73 0.00 40.07 3.53
333 334 2.789723 CACGCGCGTTCGTTTTCC 60.790 61.111 35.90 0.00 41.21 3.13
334 335 3.438539 GCACGCGCGTTCGTTTTC 61.439 61.111 35.90 12.21 41.21 2.29
335 336 4.949125 GGCACGCGCGTTCGTTTT 62.949 61.111 35.90 6.91 41.21 2.43
372 373 0.450583 TCTCTTTCATCGGACGGACG 59.549 55.000 0.00 0.00 0.00 4.79
373 374 1.794437 CGTCTCTTTCATCGGACGGAC 60.794 57.143 0.00 0.00 44.92 4.79
374 375 0.450583 CGTCTCTTTCATCGGACGGA 59.549 55.000 0.00 0.00 44.92 4.69
375 376 2.945315 CGTCTCTTTCATCGGACGG 58.055 57.895 0.00 0.00 44.92 4.79
377 378 2.733517 GGATCGTCTCTTTCATCGGAC 58.266 52.381 0.00 0.00 0.00 4.79
378 379 1.333931 CGGATCGTCTCTTTCATCGGA 59.666 52.381 0.00 0.00 0.00 4.55
379 380 1.333931 TCGGATCGTCTCTTTCATCGG 59.666 52.381 0.00 0.00 0.00 4.18
380 381 2.376956 GTCGGATCGTCTCTTTCATCG 58.623 52.381 0.00 0.00 0.00 3.84
381 382 2.376956 CGTCGGATCGTCTCTTTCATC 58.623 52.381 0.00 0.00 0.00 2.92
382 383 1.065701 CCGTCGGATCGTCTCTTTCAT 59.934 52.381 4.91 0.00 0.00 2.57
383 384 0.450583 CCGTCGGATCGTCTCTTTCA 59.549 55.000 4.91 0.00 0.00 2.69
384 385 0.731417 TCCGTCGGATCGTCTCTTTC 59.269 55.000 10.71 0.00 0.00 2.62
385 386 0.450983 GTCCGTCGGATCGTCTCTTT 59.549 55.000 18.75 0.00 32.73 2.52
386 387 1.703438 CGTCCGTCGGATCGTCTCTT 61.703 60.000 18.75 0.00 32.73 2.85
387 388 2.172372 CGTCCGTCGGATCGTCTCT 61.172 63.158 18.75 0.00 32.73 3.10
388 389 2.323790 CGTCCGTCGGATCGTCTC 59.676 66.667 18.75 1.96 32.73 3.36
389 390 3.873883 GCGTCCGTCGGATCGTCT 61.874 66.667 25.99 0.00 40.26 4.18
409 410 3.958822 AACCGACCGATCACGCGTC 62.959 63.158 9.86 0.00 38.29 5.19
410 411 4.047059 AACCGACCGATCACGCGT 62.047 61.111 5.58 5.58 38.29 6.01
411 412 3.541831 CAACCGACCGATCACGCG 61.542 66.667 3.53 3.53 38.29 6.01
412 413 3.849953 GCAACCGACCGATCACGC 61.850 66.667 0.00 0.00 38.29 5.34
413 414 2.431771 TGCAACCGACCGATCACG 60.432 61.111 0.00 0.00 39.43 4.35
414 415 2.726691 CGTGCAACCGACCGATCAC 61.727 63.158 0.00 0.00 0.00 3.06
415 416 2.220615 ATCGTGCAACCGACCGATCA 62.221 55.000 1.07 0.00 40.08 2.92
416 417 0.248743 TATCGTGCAACCGACCGATC 60.249 55.000 10.46 0.00 40.08 3.69
417 418 0.248907 CTATCGTGCAACCGACCGAT 60.249 55.000 11.65 11.65 40.08 4.18
418 419 1.138036 CTATCGTGCAACCGACCGA 59.862 57.895 1.07 0.00 40.08 4.69
419 420 2.514013 GCTATCGTGCAACCGACCG 61.514 63.158 1.07 0.00 40.08 4.79
420 421 0.739813 AAGCTATCGTGCAACCGACC 60.740 55.000 1.07 0.00 40.08 4.79
421 422 1.076332 AAAGCTATCGTGCAACCGAC 58.924 50.000 1.07 0.00 40.08 4.79
422 423 1.730064 GAAAAGCTATCGTGCAACCGA 59.270 47.619 1.59 1.59 41.73 4.69
423 424 1.202031 GGAAAAGCTATCGTGCAACCG 60.202 52.381 0.00 0.00 34.99 4.44
424 425 1.132453 GGGAAAAGCTATCGTGCAACC 59.868 52.381 0.00 0.00 34.99 3.77
425 426 1.810151 TGGGAAAAGCTATCGTGCAAC 59.190 47.619 0.00 0.00 34.99 4.17
426 427 2.192664 TGGGAAAAGCTATCGTGCAA 57.807 45.000 0.00 0.00 34.99 4.08
427 428 2.418368 ATGGGAAAAGCTATCGTGCA 57.582 45.000 0.00 0.00 34.99 4.57
428 429 5.008613 TGAATAATGGGAAAAGCTATCGTGC 59.991 40.000 0.00 0.00 0.00 5.34
429 430 6.618287 TGAATAATGGGAAAAGCTATCGTG 57.382 37.500 0.00 0.00 0.00 4.35
430 431 7.936847 TGTATGAATAATGGGAAAAGCTATCGT 59.063 33.333 0.00 0.00 0.00 3.73
431 432 8.230486 GTGTATGAATAATGGGAAAAGCTATCG 58.770 37.037 0.00 0.00 0.00 2.92
432 433 9.066892 TGTGTATGAATAATGGGAAAAGCTATC 57.933 33.333 0.00 0.00 0.00 2.08
433 434 8.995027 TGTGTATGAATAATGGGAAAAGCTAT 57.005 30.769 0.00 0.00 0.00 2.97
434 435 8.995027 ATGTGTATGAATAATGGGAAAAGCTA 57.005 30.769 0.00 0.00 0.00 3.32
435 436 7.902920 ATGTGTATGAATAATGGGAAAAGCT 57.097 32.000 0.00 0.00 0.00 3.74
455 456 9.520204 GGATCATGGTTTTCTTTGTATTATGTG 57.480 33.333 0.00 0.00 0.00 3.21
456 457 9.479549 AGGATCATGGTTTTCTTTGTATTATGT 57.520 29.630 0.00 0.00 0.00 2.29
459 460 8.748412 CCAAGGATCATGGTTTTCTTTGTATTA 58.252 33.333 8.29 0.00 33.08 0.98
460 461 7.310609 CCCAAGGATCATGGTTTTCTTTGTATT 60.311 37.037 13.86 0.00 36.14 1.89
461 462 6.155049 CCCAAGGATCATGGTTTTCTTTGTAT 59.845 38.462 13.86 0.00 36.14 2.29
462 463 5.480073 CCCAAGGATCATGGTTTTCTTTGTA 59.520 40.000 13.86 0.00 36.14 2.41
463 464 4.284234 CCCAAGGATCATGGTTTTCTTTGT 59.716 41.667 13.86 0.00 36.14 2.83
464 465 4.322953 CCCCAAGGATCATGGTTTTCTTTG 60.323 45.833 13.86 0.00 36.14 2.77
465 466 3.840078 CCCCAAGGATCATGGTTTTCTTT 59.160 43.478 13.86 0.00 36.14 2.52
466 467 3.181407 ACCCCAAGGATCATGGTTTTCTT 60.181 43.478 13.86 0.00 36.14 2.52
467 468 2.383338 ACCCCAAGGATCATGGTTTTCT 59.617 45.455 13.86 0.00 36.14 2.52
468 469 2.497273 CACCCCAAGGATCATGGTTTTC 59.503 50.000 13.86 0.00 36.14 2.29
469 470 2.539302 CACCCCAAGGATCATGGTTTT 58.461 47.619 13.86 0.00 36.14 2.43
470 471 1.896755 GCACCCCAAGGATCATGGTTT 60.897 52.381 13.86 0.37 36.14 3.27
471 472 0.324645 GCACCCCAAGGATCATGGTT 60.325 55.000 13.86 0.67 36.14 3.67
472 473 1.307647 GCACCCCAAGGATCATGGT 59.692 57.895 13.86 0.00 36.14 3.55
473 474 1.456331 GGCACCCCAAGGATCATGG 60.456 63.158 9.30 9.30 37.71 3.66
474 475 4.265206 GGCACCCCAAGGATCATG 57.735 61.111 0.00 0.00 36.73 3.07
496 497 0.312729 GCTTAGAGAGTAGCCGAGGC 59.687 60.000 5.89 5.89 42.33 4.70
497 498 1.975660 AGCTTAGAGAGTAGCCGAGG 58.024 55.000 0.00 0.00 38.14 4.63
498 499 4.577283 AGTTAAGCTTAGAGAGTAGCCGAG 59.423 45.833 6.24 0.00 38.14 4.63
499 500 4.525024 AGTTAAGCTTAGAGAGTAGCCGA 58.475 43.478 6.24 0.00 38.14 5.54
500 501 4.553156 CGAGTTAAGCTTAGAGAGTAGCCG 60.553 50.000 6.24 0.00 38.14 5.52
501 502 4.575645 TCGAGTTAAGCTTAGAGAGTAGCC 59.424 45.833 6.24 0.00 38.14 3.93
502 503 5.738118 TCGAGTTAAGCTTAGAGAGTAGC 57.262 43.478 6.24 0.00 37.66 3.58
505 506 8.688151 ACAAATATCGAGTTAAGCTTAGAGAGT 58.312 33.333 6.24 0.00 0.00 3.24
506 507 9.522804 AACAAATATCGAGTTAAGCTTAGAGAG 57.477 33.333 6.24 1.03 0.00 3.20
507 508 9.302345 CAACAAATATCGAGTTAAGCTTAGAGA 57.698 33.333 6.24 5.64 0.00 3.10
508 509 8.058915 GCAACAAATATCGAGTTAAGCTTAGAG 58.941 37.037 6.24 0.35 0.00 2.43
509 510 7.547722 TGCAACAAATATCGAGTTAAGCTTAGA 59.452 33.333 6.24 0.90 0.00 2.10
510 511 7.684670 TGCAACAAATATCGAGTTAAGCTTAG 58.315 34.615 6.24 0.00 0.00 2.18
511 512 7.603963 TGCAACAAATATCGAGTTAAGCTTA 57.396 32.000 0.86 0.86 0.00 3.09
512 513 6.494893 TGCAACAAATATCGAGTTAAGCTT 57.505 33.333 3.48 3.48 0.00 3.74
513 514 6.494893 TTGCAACAAATATCGAGTTAAGCT 57.505 33.333 0.00 0.00 0.00 3.74
514 515 6.251376 CCTTTGCAACAAATATCGAGTTAAGC 59.749 38.462 0.00 0.00 0.00 3.09
515 516 6.251376 GCCTTTGCAACAAATATCGAGTTAAG 59.749 38.462 0.00 0.00 37.47 1.85
516 517 6.072175 AGCCTTTGCAACAAATATCGAGTTAA 60.072 34.615 0.00 0.00 41.13 2.01
517 518 5.414454 AGCCTTTGCAACAAATATCGAGTTA 59.586 36.000 0.00 0.00 41.13 2.24
518 519 4.218417 AGCCTTTGCAACAAATATCGAGTT 59.782 37.500 0.00 0.00 41.13 3.01
519 520 3.758554 AGCCTTTGCAACAAATATCGAGT 59.241 39.130 0.00 0.00 41.13 4.18
520 521 4.142622 TGAGCCTTTGCAACAAATATCGAG 60.143 41.667 0.00 0.00 41.13 4.04
521 522 3.755905 TGAGCCTTTGCAACAAATATCGA 59.244 39.130 0.00 0.00 41.13 3.59
522 523 4.095410 TGAGCCTTTGCAACAAATATCG 57.905 40.909 0.00 0.00 41.13 2.92
523 524 4.324402 CGTTGAGCCTTTGCAACAAATATC 59.676 41.667 0.00 0.00 43.35 1.63
524 525 4.236935 CGTTGAGCCTTTGCAACAAATAT 58.763 39.130 0.00 0.00 43.35 1.28
525 526 3.551863 CCGTTGAGCCTTTGCAACAAATA 60.552 43.478 0.00 0.00 43.35 1.40
526 527 2.472816 CGTTGAGCCTTTGCAACAAAT 58.527 42.857 0.00 0.00 43.35 2.32
527 528 1.470632 CCGTTGAGCCTTTGCAACAAA 60.471 47.619 0.00 0.00 43.35 2.83
528 529 0.102120 CCGTTGAGCCTTTGCAACAA 59.898 50.000 0.00 0.00 43.35 2.83
529 530 1.732917 CCGTTGAGCCTTTGCAACA 59.267 52.632 0.00 0.00 43.35 3.33
530 531 1.661509 GCCGTTGAGCCTTTGCAAC 60.662 57.895 0.00 0.00 41.13 4.17
531 532 1.795170 GAGCCGTTGAGCCTTTGCAA 61.795 55.000 0.00 0.00 41.13 4.08
532 533 2.203337 AGCCGTTGAGCCTTTGCA 60.203 55.556 0.00 0.00 41.13 4.08
533 534 1.795170 TTGAGCCGTTGAGCCTTTGC 61.795 55.000 0.00 0.00 37.95 3.68
534 535 0.040067 GTTGAGCCGTTGAGCCTTTG 60.040 55.000 0.00 0.00 0.00 2.77
535 536 0.465460 TGTTGAGCCGTTGAGCCTTT 60.465 50.000 0.00 0.00 0.00 3.11
536 537 0.465460 TTGTTGAGCCGTTGAGCCTT 60.465 50.000 0.00 0.00 0.00 4.35
537 538 0.465460 TTTGTTGAGCCGTTGAGCCT 60.465 50.000 0.00 0.00 0.00 4.58
538 539 0.383949 TTTTGTTGAGCCGTTGAGCC 59.616 50.000 0.00 0.00 0.00 4.70
539 540 1.852280 GTTTTTGTTGAGCCGTTGAGC 59.148 47.619 0.00 0.00 0.00 4.26
540 541 2.108700 CGTTTTTGTTGAGCCGTTGAG 58.891 47.619 0.00 0.00 0.00 3.02
541 542 1.202200 CCGTTTTTGTTGAGCCGTTGA 60.202 47.619 0.00 0.00 0.00 3.18
542 543 1.196200 CCGTTTTTGTTGAGCCGTTG 58.804 50.000 0.00 0.00 0.00 4.10
543 544 0.101579 CCCGTTTTTGTTGAGCCGTT 59.898 50.000 0.00 0.00 0.00 4.44
544 545 1.033202 ACCCGTTTTTGTTGAGCCGT 61.033 50.000 0.00 0.00 0.00 5.68
545 546 0.317519 GACCCGTTTTTGTTGAGCCG 60.318 55.000 0.00 0.00 0.00 5.52
546 547 0.741915 TGACCCGTTTTTGTTGAGCC 59.258 50.000 0.00 0.00 0.00 4.70
547 548 2.223711 ACATGACCCGTTTTTGTTGAGC 60.224 45.455 0.00 0.00 0.00 4.26
548 549 3.708563 ACATGACCCGTTTTTGTTGAG 57.291 42.857 0.00 0.00 0.00 3.02
549 550 3.003897 GCTACATGACCCGTTTTTGTTGA 59.996 43.478 0.00 0.00 0.00 3.18
550 551 3.004315 AGCTACATGACCCGTTTTTGTTG 59.996 43.478 0.00 0.00 0.00 3.33
551 552 3.219281 AGCTACATGACCCGTTTTTGTT 58.781 40.909 0.00 0.00 0.00 2.83
552 553 2.858745 AGCTACATGACCCGTTTTTGT 58.141 42.857 0.00 0.00 0.00 2.83
553 554 4.876107 AGATAGCTACATGACCCGTTTTTG 59.124 41.667 0.00 0.00 0.00 2.44
554 555 4.876107 CAGATAGCTACATGACCCGTTTTT 59.124 41.667 0.00 0.00 0.00 1.94
555 556 4.081087 ACAGATAGCTACATGACCCGTTTT 60.081 41.667 12.71 0.00 0.00 2.43
556 557 3.451178 ACAGATAGCTACATGACCCGTTT 59.549 43.478 12.71 0.00 0.00 3.60
557 558 3.031736 ACAGATAGCTACATGACCCGTT 58.968 45.455 12.71 0.00 0.00 4.44
558 559 2.362397 CACAGATAGCTACATGACCCGT 59.638 50.000 12.71 0.00 0.00 5.28
559 560 2.288457 CCACAGATAGCTACATGACCCG 60.288 54.545 12.71 0.89 0.00 5.28
560 561 2.548920 GCCACAGATAGCTACATGACCC 60.549 54.545 12.71 0.00 0.00 4.46
561 562 2.366916 AGCCACAGATAGCTACATGACC 59.633 50.000 12.71 2.60 37.64 4.02
562 563 3.742433 AGCCACAGATAGCTACATGAC 57.258 47.619 12.71 3.71 37.64 3.06
563 564 3.706086 TGAAGCCACAGATAGCTACATGA 59.294 43.478 12.71 0.00 38.74 3.07
564 565 4.063998 TGAAGCCACAGATAGCTACATG 57.936 45.455 0.00 0.00 38.74 3.21
565 566 4.346127 TGATGAAGCCACAGATAGCTACAT 59.654 41.667 0.00 0.00 38.74 2.29
566 567 3.706086 TGATGAAGCCACAGATAGCTACA 59.294 43.478 0.00 0.00 38.74 2.74
567 568 4.327982 TGATGAAGCCACAGATAGCTAC 57.672 45.455 0.00 0.00 38.74 3.58
568 569 5.118990 GTTTGATGAAGCCACAGATAGCTA 58.881 41.667 0.00 0.00 38.74 3.32
569 570 3.920231 TTGATGAAGCCACAGATAGCT 57.080 42.857 0.00 0.00 42.40 3.32
570 571 3.691118 TGTTTGATGAAGCCACAGATAGC 59.309 43.478 0.00 0.00 0.00 2.97
571 572 4.940046 ACTGTTTGATGAAGCCACAGATAG 59.060 41.667 4.67 0.00 38.59 2.08
572 573 4.910195 ACTGTTTGATGAAGCCACAGATA 58.090 39.130 4.67 0.00 38.59 1.98
573 574 3.759581 ACTGTTTGATGAAGCCACAGAT 58.240 40.909 4.67 0.00 38.59 2.90
574 575 3.213206 ACTGTTTGATGAAGCCACAGA 57.787 42.857 4.67 0.00 38.59 3.41
575 576 4.067896 ACTACTGTTTGATGAAGCCACAG 58.932 43.478 0.00 0.00 40.65 3.66
576 577 4.085357 ACTACTGTTTGATGAAGCCACA 57.915 40.909 0.00 0.00 0.00 4.17
577 578 4.377431 CGAACTACTGTTTGATGAAGCCAC 60.377 45.833 0.00 0.00 39.36 5.01
578 579 3.745975 CGAACTACTGTTTGATGAAGCCA 59.254 43.478 0.00 0.00 39.36 4.75
579 580 3.125316 CCGAACTACTGTTTGATGAAGCC 59.875 47.826 0.00 0.00 39.36 4.35
580 581 3.125316 CCCGAACTACTGTTTGATGAAGC 59.875 47.826 0.00 0.00 39.36 3.86
581 582 3.125316 GCCCGAACTACTGTTTGATGAAG 59.875 47.826 0.00 0.00 39.36 3.02
582 583 3.071479 GCCCGAACTACTGTTTGATGAA 58.929 45.455 0.00 0.00 39.36 2.57
583 584 2.695359 GCCCGAACTACTGTTTGATGA 58.305 47.619 0.00 0.00 39.36 2.92
584 585 1.393539 CGCCCGAACTACTGTTTGATG 59.606 52.381 0.00 0.00 39.36 3.07
585 586 1.674817 CCGCCCGAACTACTGTTTGAT 60.675 52.381 0.00 0.00 39.36 2.57
586 587 0.320073 CCGCCCGAACTACTGTTTGA 60.320 55.000 0.00 0.00 39.36 2.69
587 588 0.601841 ACCGCCCGAACTACTGTTTG 60.602 55.000 0.00 0.00 36.39 2.93
588 589 0.107268 AACCGCCCGAACTACTGTTT 59.893 50.000 0.00 0.00 36.39 2.83
589 590 0.601841 CAACCGCCCGAACTACTGTT 60.602 55.000 0.00 0.00 39.42 3.16
590 591 1.005394 CAACCGCCCGAACTACTGT 60.005 57.895 0.00 0.00 0.00 3.55
591 592 0.108329 ATCAACCGCCCGAACTACTG 60.108 55.000 0.00 0.00 0.00 2.74
592 593 0.175073 GATCAACCGCCCGAACTACT 59.825 55.000 0.00 0.00 0.00 2.57
593 594 0.175073 AGATCAACCGCCCGAACTAC 59.825 55.000 0.00 0.00 0.00 2.73
594 595 0.899720 AAGATCAACCGCCCGAACTA 59.100 50.000 0.00 0.00 0.00 2.24
595 596 0.036306 AAAGATCAACCGCCCGAACT 59.964 50.000 0.00 0.00 0.00 3.01
596 597 1.729284 TAAAGATCAACCGCCCGAAC 58.271 50.000 0.00 0.00 0.00 3.95
597 598 2.093394 TCATAAAGATCAACCGCCCGAA 60.093 45.455 0.00 0.00 0.00 4.30
598 599 1.483004 TCATAAAGATCAACCGCCCGA 59.517 47.619 0.00 0.00 0.00 5.14
599 600 1.948104 TCATAAAGATCAACCGCCCG 58.052 50.000 0.00 0.00 0.00 6.13
600 601 4.455877 CCTTATCATAAAGATCAACCGCCC 59.544 45.833 0.00 0.00 38.19 6.13
601 602 4.455877 CCCTTATCATAAAGATCAACCGCC 59.544 45.833 0.00 0.00 38.19 6.13
602 603 5.305585 TCCCTTATCATAAAGATCAACCGC 58.694 41.667 0.00 0.00 38.19 5.68
603 604 7.661437 TGATTCCCTTATCATAAAGATCAACCG 59.339 37.037 0.00 0.00 38.19 4.44
604 605 8.924511 TGATTCCCTTATCATAAAGATCAACC 57.075 34.615 0.00 0.00 38.19 3.77
610 611 9.109393 CGTTCTTTGATTCCCTTATCATAAAGA 57.891 33.333 0.00 0.00 34.67 2.52
611 612 8.893727 ACGTTCTTTGATTCCCTTATCATAAAG 58.106 33.333 0.00 0.00 34.67 1.85
612 613 8.801882 ACGTTCTTTGATTCCCTTATCATAAA 57.198 30.769 0.00 0.00 34.67 1.40
613 614 8.801882 AACGTTCTTTGATTCCCTTATCATAA 57.198 30.769 0.00 0.00 34.67 1.90
614 615 7.223971 CGAACGTTCTTTGATTCCCTTATCATA 59.776 37.037 24.80 0.00 34.67 2.15
615 616 6.037172 CGAACGTTCTTTGATTCCCTTATCAT 59.963 38.462 24.80 0.00 34.67 2.45
616 617 5.350365 CGAACGTTCTTTGATTCCCTTATCA 59.650 40.000 24.80 0.00 32.87 2.15
617 618 5.579511 TCGAACGTTCTTTGATTCCCTTATC 59.420 40.000 24.80 0.00 0.00 1.75
618 619 5.484715 TCGAACGTTCTTTGATTCCCTTAT 58.515 37.500 24.80 0.00 0.00 1.73
619 620 4.885413 TCGAACGTTCTTTGATTCCCTTA 58.115 39.130 24.80 0.00 0.00 2.69
620 621 3.735591 TCGAACGTTCTTTGATTCCCTT 58.264 40.909 24.80 0.00 0.00 3.95
621 622 3.006537 TCTCGAACGTTCTTTGATTCCCT 59.993 43.478 24.80 0.00 0.00 4.20
622 623 3.323243 TCTCGAACGTTCTTTGATTCCC 58.677 45.455 24.80 0.00 0.00 3.97
623 624 4.625742 TGATCTCGAACGTTCTTTGATTCC 59.374 41.667 24.80 13.72 0.00 3.01
624 625 5.763444 TGATCTCGAACGTTCTTTGATTC 57.237 39.130 24.80 14.08 0.00 2.52
625 626 5.639506 ACATGATCTCGAACGTTCTTTGATT 59.360 36.000 24.80 9.25 0.00 2.57
626 627 5.171476 ACATGATCTCGAACGTTCTTTGAT 58.829 37.500 24.80 21.89 0.00 2.57
627 628 4.556233 ACATGATCTCGAACGTTCTTTGA 58.444 39.130 24.80 18.70 0.00 2.69
628 629 4.385748 TGACATGATCTCGAACGTTCTTTG 59.614 41.667 24.80 14.51 0.00 2.77
629 630 4.556233 TGACATGATCTCGAACGTTCTTT 58.444 39.130 24.80 7.67 0.00 2.52
630 631 4.174411 TGACATGATCTCGAACGTTCTT 57.826 40.909 24.80 8.02 0.00 2.52
631 632 3.850122 TGACATGATCTCGAACGTTCT 57.150 42.857 24.80 7.11 0.00 3.01
632 633 4.903638 TTTGACATGATCTCGAACGTTC 57.096 40.909 18.47 18.47 0.00 3.95
633 634 5.465390 TCTTTTTGACATGATCTCGAACGTT 59.535 36.000 0.00 0.00 0.00 3.99
634 635 4.988540 TCTTTTTGACATGATCTCGAACGT 59.011 37.500 0.00 0.00 0.00 3.99
635 636 5.515548 TCTTTTTGACATGATCTCGAACG 57.484 39.130 0.00 0.00 0.00 3.95
636 637 8.560576 TTTTTCTTTTTGACATGATCTCGAAC 57.439 30.769 0.00 0.00 0.00 3.95
637 638 8.405531 ACTTTTTCTTTTTGACATGATCTCGAA 58.594 29.630 0.00 0.00 0.00 3.71
638 639 7.930217 ACTTTTTCTTTTTGACATGATCTCGA 58.070 30.769 0.00 0.00 0.00 4.04
639 640 8.566008 AACTTTTTCTTTTTGACATGATCTCG 57.434 30.769 0.00 0.00 0.00 4.04
640 641 8.685536 CGAACTTTTTCTTTTTGACATGATCTC 58.314 33.333 0.00 0.00 0.00 2.75
641 642 8.405531 TCGAACTTTTTCTTTTTGACATGATCT 58.594 29.630 0.00 0.00 0.00 2.75
642 643 8.560576 TCGAACTTTTTCTTTTTGACATGATC 57.439 30.769 0.00 0.00 0.00 2.92
643 644 9.533253 AATCGAACTTTTTCTTTTTGACATGAT 57.467 25.926 0.00 0.00 0.00 2.45
644 645 8.925161 AATCGAACTTTTTCTTTTTGACATGA 57.075 26.923 0.00 0.00 0.00 3.07
684 685 5.064198 TCAAACTGATCTCGAACGTGTTTTT 59.936 36.000 0.00 0.00 0.00 1.94
685 686 4.569162 TCAAACTGATCTCGAACGTGTTTT 59.431 37.500 0.00 0.00 0.00 2.43
686 687 4.116961 TCAAACTGATCTCGAACGTGTTT 58.883 39.130 0.00 0.00 0.00 2.83
687 688 3.713288 TCAAACTGATCTCGAACGTGTT 58.287 40.909 0.00 0.00 0.00 3.32
688 689 3.309388 CTCAAACTGATCTCGAACGTGT 58.691 45.455 0.00 0.00 0.00 4.49
689 690 2.663602 CCTCAAACTGATCTCGAACGTG 59.336 50.000 0.00 0.00 0.00 4.49
708 709 2.122768 CCCTCTTGATGCTTAGACCCT 58.877 52.381 0.00 0.00 0.00 4.34
739 740 4.704833 CCTGGTCTGCCACGTGGG 62.705 72.222 34.58 19.84 40.46 4.61
758 759 2.184830 CGAGGGATACGGACGCTGA 61.185 63.158 0.00 0.00 37.60 4.26
785 786 3.094062 GCAGCTACGGCCCTGATGA 62.094 63.158 10.58 0.00 39.73 2.92
793 794 2.962253 GGTCGATGCAGCTACGGC 60.962 66.667 0.00 9.24 39.06 5.68
830 831 1.832167 GGGTTTGCTTGTGGGCTCA 60.832 57.895 0.00 0.00 0.00 4.26
842 843 0.521735 GCTTTGGCGACTAGGGTTTG 59.478 55.000 0.00 0.00 0.00 2.93
984 989 0.322997 CCATGTTGGCGAAAGGGGTA 60.323 55.000 0.00 0.00 0.00 3.69
1029 1034 6.484364 AGAAACAACCATGGAAAATCAACT 57.516 33.333 21.47 5.11 0.00 3.16
1048 1053 4.345257 AGATCGCTAATCCTAGCCAAGAAA 59.655 41.667 0.00 0.00 46.80 2.52
1164 1169 0.738975 TGACCGTCCATAAGCTCGAG 59.261 55.000 8.45 8.45 0.00 4.04
1352 1357 9.830975 AATTACTCAAAAAGCATGGTTAAAAGT 57.169 25.926 11.15 13.62 0.00 2.66
1427 1440 1.569708 AAATGCTTTGTTGTGCACGG 58.430 45.000 13.13 0.00 42.26 4.94
1428 1441 4.041049 TCTAAAATGCTTTGTTGTGCACG 58.959 39.130 13.13 0.00 42.26 5.34
1438 1451 6.210185 AGAGAAACAGCCATCTAAAATGCTTT 59.790 34.615 0.00 0.00 30.08 3.51
1524 1537 8.761575 ACATTGCATTCGTTTAAAATCAGAAT 57.238 26.923 0.00 0.00 32.43 2.40
1538 1551 4.043750 ACAACAGTTTGACATTGCATTCG 58.956 39.130 0.00 0.00 36.48 3.34
1543 1556 3.182972 GCATCACAACAGTTTGACATTGC 59.817 43.478 1.67 4.54 36.48 3.56
1572 1585 9.683069 CAAAAGCAAAACAATATAACAGACTCT 57.317 29.630 0.00 0.00 0.00 3.24
1584 1597 3.608796 ACCACAGCAAAAGCAAAACAAT 58.391 36.364 0.00 0.00 0.00 2.71
1849 1862 0.176680 ACCGCTGCAATAGAGTCCAG 59.823 55.000 0.00 0.00 0.00 3.86
2023 2049 4.158764 ACTTAGTACCTACAGCAGAGCAAG 59.841 45.833 0.00 0.00 0.00 4.01
2104 2201 1.160137 GAATATCTCCCACGGCATGC 58.840 55.000 9.90 9.90 0.00 4.06
2263 2361 3.025262 TGTAAACACAAAGGAACCACCC 58.975 45.455 0.00 0.00 40.05 4.61
2264 2362 3.490249 GCTGTAAACACAAAGGAACCACC 60.490 47.826 0.00 0.00 39.35 4.61
2265 2363 3.129638 TGCTGTAAACACAAAGGAACCAC 59.870 43.478 0.00 0.00 0.00 4.16
2332 2430 4.734398 AACAGGAGCAAAATGTGACAAA 57.266 36.364 0.00 0.00 0.00 2.83
2373 2471 3.445805 TCAAACTGGGGAACAAAACTCAC 59.554 43.478 0.00 0.00 0.00 3.51
2424 2526 2.317371 AATACACCACCAATGCCCAA 57.683 45.000 0.00 0.00 0.00 4.12
2443 2545 7.547370 CCTGAAACAAACAACACCAAATTCTAA 59.453 33.333 0.00 0.00 0.00 2.10
2456 2558 3.949113 GTCCCTACACCTGAAACAAACAA 59.051 43.478 0.00 0.00 0.00 2.83
2469 2571 1.742750 GCTTGAATCCGGTCCCTACAC 60.743 57.143 0.00 0.00 0.00 2.90
2471 2573 0.831307 AGCTTGAATCCGGTCCCTAC 59.169 55.000 0.00 0.00 0.00 3.18
2562 2671 2.938451 CAACAGAATCAGCTGCGGATTA 59.062 45.455 24.28 0.00 39.51 1.75
2582 2697 2.825532 GTTTATTTGGGCTTCAGCTCCA 59.174 45.455 0.00 0.66 41.95 3.86
2584 2699 4.488879 CTTGTTTATTTGGGCTTCAGCTC 58.511 43.478 0.00 0.00 43.24 4.09
2599 2714 1.145945 TGGTGCATGGGACCTTGTTTA 59.854 47.619 8.39 0.00 34.26 2.01
2638 2753 1.421268 AGATCAAACACAGCCACCTCA 59.579 47.619 0.00 0.00 0.00 3.86
2639 2754 1.808945 CAGATCAAACACAGCCACCTC 59.191 52.381 0.00 0.00 0.00 3.85
2661 2788 0.251209 ACAGCCACCTACGTGAGAGA 60.251 55.000 0.00 0.00 43.14 3.10
2667 2794 2.030562 GCACACAGCCACCTACGT 59.969 61.111 0.00 0.00 37.23 3.57
2668 2795 3.112075 CGCACACAGCCACCTACG 61.112 66.667 0.00 0.00 41.38 3.51
2679 2806 0.454957 CAGTAGCAAATGCCGCACAC 60.455 55.000 0.00 0.00 43.38 3.82
2680 2807 1.585267 CCAGTAGCAAATGCCGCACA 61.585 55.000 0.00 0.00 43.38 4.57
2681 2808 1.137404 CCAGTAGCAAATGCCGCAC 59.863 57.895 0.00 0.00 43.38 5.34
2708 2865 0.541392 TGGGCTTCAGCGATACATGT 59.459 50.000 2.69 2.69 43.26 3.21
2710 2867 2.613977 GCTATGGGCTTCAGCGATACAT 60.614 50.000 0.00 0.00 43.26 2.29
2711 2868 1.270305 GCTATGGGCTTCAGCGATACA 60.270 52.381 0.00 0.00 43.26 2.29
2712 2869 1.433534 GCTATGGGCTTCAGCGATAC 58.566 55.000 0.00 0.00 43.26 2.24
2726 3366 1.000171 TCATCCTGCAGCTACGCTATG 60.000 52.381 8.66 3.13 36.40 2.23
2746 3386 9.754382 GCATGGATAAGTTCAAACAATCATATT 57.246 29.630 0.00 0.00 0.00 1.28
2747 3387 8.916062 TGCATGGATAAGTTCAAACAATCATAT 58.084 29.630 0.00 3.11 0.00 1.78
2748 3388 8.291191 TGCATGGATAAGTTCAAACAATCATA 57.709 30.769 0.00 1.53 0.00 2.15
2749 3389 7.172868 TGCATGGATAAGTTCAAACAATCAT 57.827 32.000 0.00 0.00 0.00 2.45
2750 3390 6.587206 TGCATGGATAAGTTCAAACAATCA 57.413 33.333 0.00 0.00 0.00 2.57
2766 3406 2.146920 TTCATCCAAGCATGCATGGA 57.853 45.000 38.36 38.36 46.01 3.41
2767 3407 2.971660 TTTCATCCAAGCATGCATGG 57.028 45.000 31.44 31.44 36.25 3.66
2792 3432 2.115291 GGAACAGCCTCATTCCGCC 61.115 63.158 0.00 0.00 35.34 6.13
2793 3433 1.377202 TGGAACAGCCTCATTCCGC 60.377 57.895 0.00 0.00 46.35 5.54
2805 3445 8.364142 CCATAAAGGAAAATGTTAACTGGAACA 58.636 33.333 7.22 0.71 40.96 3.18
2831 3471 1.653151 GTTCGCTGGACATTAGGGTC 58.347 55.000 0.00 0.00 37.06 4.46
2834 3474 2.403252 AAGGTTCGCTGGACATTAGG 57.597 50.000 0.00 0.00 0.00 2.69
2841 3481 2.742348 TCCTATGTAAGGTTCGCTGGA 58.258 47.619 0.00 0.00 46.62 3.86
2854 3494 4.210331 GCAAATGTCATCCCTTCCTATGT 58.790 43.478 0.00 0.00 0.00 2.29
2856 3496 4.524802 TGCAAATGTCATCCCTTCCTAT 57.475 40.909 0.00 0.00 0.00 2.57
2857 3497 4.314522 TTGCAAATGTCATCCCTTCCTA 57.685 40.909 0.00 0.00 0.00 2.94
2859 3499 3.006752 TGTTTGCAAATGTCATCCCTTCC 59.993 43.478 16.21 0.00 0.00 3.46
2875 3515 1.069049 ACTGCCAGTGGAAATGTTTGC 59.931 47.619 15.20 0.00 0.00 3.68
2876 3516 3.457610 AACTGCCAGTGGAAATGTTTG 57.542 42.857 15.20 0.00 0.00 2.93
2877 3517 4.486125 AAAACTGCCAGTGGAAATGTTT 57.514 36.364 15.20 13.75 0.00 2.83
2881 3521 8.644374 TTATAACTAAAACTGCCAGTGGAAAT 57.356 30.769 15.20 0.00 0.00 2.17
2885 3525 7.681939 TCTTTATAACTAAAACTGCCAGTGG 57.318 36.000 4.20 4.20 0.00 4.00
2909 3549 9.745018 TCATCCTCTTCTAAAGAAAATGTCATT 57.255 29.630 0.00 0.00 37.02 2.57
2976 3774 6.205658 GGGAATGTAAATCAGGAAGTGATAGC 59.794 42.308 0.00 0.00 45.89 2.97
2984 3782 4.946160 ACTGGGGAATGTAAATCAGGAA 57.054 40.909 0.00 0.00 0.00 3.36
2985 3783 4.946160 AACTGGGGAATGTAAATCAGGA 57.054 40.909 0.00 0.00 0.00 3.86
2999 3798 5.719563 ACATAAAGGGAAATGTTAACTGGGG 59.280 40.000 7.22 0.00 32.43 4.96
3019 3818 4.071423 CGCCATCACCAAATCCATACATA 58.929 43.478 0.00 0.00 0.00 2.29
3021 3820 2.092699 TCGCCATCACCAAATCCATACA 60.093 45.455 0.00 0.00 0.00 2.29
3113 3914 8.538409 AACCAATTATTTCATTCACTGCTTTC 57.462 30.769 0.00 0.00 0.00 2.62
3149 3950 5.756347 TCGATCCAATTACAAGGGATTTACG 59.244 40.000 0.00 0.00 41.39 3.18
3167 3969 3.146066 AGAGCTAGTGTCTCATCGATCC 58.854 50.000 0.00 0.00 33.15 3.36
3168 3970 6.494893 AATAGAGCTAGTGTCTCATCGATC 57.505 41.667 0.00 0.00 33.15 3.69
3169 3971 8.574251 AATAATAGAGCTAGTGTCTCATCGAT 57.426 34.615 0.00 0.00 33.15 3.59
3170 3972 7.661847 TGAATAATAGAGCTAGTGTCTCATCGA 59.338 37.037 0.47 0.00 33.15 3.59
3171 3973 7.811653 TGAATAATAGAGCTAGTGTCTCATCG 58.188 38.462 0.47 0.00 33.15 3.84


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.