Multiple sequence alignment - TraesCS3B01G370600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G370600 chr3B 100.000 3372 0 0 1 3372 582754524 582751153 0.000000e+00 6228.0
1 TraesCS3B01G370600 chr3B 97.576 165 4 0 1895 2059 592823051 592822887 1.980000e-72 283.0
2 TraesCS3B01G370600 chr3B 94.737 171 8 1 1896 2065 463204855 463205025 7.170000e-67 265.0
3 TraesCS3B01G370600 chr3D 86.524 1165 84 39 410 1544 444715037 444713916 0.000000e+00 1214.0
4 TraesCS3B01G370600 chr3D 88.312 462 29 13 2057 2499 444713588 444713133 6.410000e-147 531.0
5 TraesCS3B01G370600 chr3D 90.606 330 16 8 2808 3129 444712713 444712391 1.120000e-114 424.0
6 TraesCS3B01G370600 chr3D 84.300 293 9 4 1563 1855 444713857 444713602 5.590000e-63 252.0
7 TraesCS3B01G370600 chr3A 84.627 1275 95 44 339 1545 585568767 585567526 0.000000e+00 1175.0
8 TraesCS3B01G370600 chr3A 87.615 436 26 13 2057 2475 585567102 585566678 6.540000e-132 481.0
9 TraesCS3B01G370600 chr3A 91.582 297 18 3 1563 1855 585567413 585567120 1.460000e-108 403.0
10 TraesCS3B01G370600 chr3A 88.323 334 25 8 2808 3129 585564878 585564547 4.080000e-104 388.0
11 TraesCS3B01G370600 chr3A 96.364 165 6 0 1895 2059 738744714 738744878 4.290000e-69 272.0
12 TraesCS3B01G370600 chr7A 94.798 173 8 1 1890 2062 97887584 97887413 5.550000e-68 268.0
13 TraesCS3B01G370600 chr7A 93.855 179 9 2 1894 2071 643420090 643419913 5.550000e-68 268.0
14 TraesCS3B01G370600 chr6A 95.266 169 8 0 1896 2064 402485746 402485578 5.550000e-68 268.0
15 TraesCS3B01G370600 chr1A 95.783 166 7 0 1896 2061 33392701 33392536 5.550000e-68 268.0
16 TraesCS3B01G370600 chr1A 90.244 41 4 0 23 63 493662446 493662486 2.000000e-03 54.7
17 TraesCS3B01G370600 chr5A 93.407 182 8 3 1895 2072 566272984 566272803 1.990000e-67 267.0
18 TraesCS3B01G370600 chr5A 94.152 171 10 0 1896 2066 637052632 637052802 9.280000e-66 261.0
19 TraesCS3B01G370600 chr4B 88.462 52 4 2 21 70 610755738 610755687 1.010000e-05 62.1
20 TraesCS3B01G370600 chr5D 88.636 44 4 1 21 63 80321294 80321337 6.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G370600 chr3B 582751153 582754524 3371 True 6228.00 6228 100.00000 1 3372 1 chr3B.!!$R1 3371
1 TraesCS3B01G370600 chr3D 444712391 444715037 2646 True 605.25 1214 87.43550 410 3129 4 chr3D.!!$R1 2719
2 TraesCS3B01G370600 chr3A 585564547 585568767 4220 True 611.75 1175 88.03675 339 3129 4 chr3A.!!$R1 2790

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
380 384 0.033796 CCCTGGATCCAAGCATGTGT 60.034 55.0 17.0 0.0 0.0 3.72 F
419 423 0.039074 CGATCTACCGAGCATCCACC 60.039 60.0 0.0 0.0 0.0 4.61 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1586 1790 0.241213 TCTCAGTGTGAGTGCGCTAC 59.759 55.0 9.73 5.32 44.58 3.58 R
2383 2600 0.178970 TCCCTATACACGGAGGCTCC 60.179 60.0 24.06 24.06 0.00 4.70 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 4.722700 GACACATGGCACGCCCCT 62.723 66.667 5.42 0.00 34.56 4.79
19 20 3.323758 GACACATGGCACGCCCCTA 62.324 63.158 5.42 0.00 34.56 3.53
20 21 2.192979 CACATGGCACGCCCCTAT 59.807 61.111 5.42 0.00 34.56 2.57
21 22 1.453745 CACATGGCACGCCCCTATT 60.454 57.895 5.42 0.00 34.56 1.73
22 23 1.037030 CACATGGCACGCCCCTATTT 61.037 55.000 5.42 0.00 34.56 1.40
23 24 0.324275 ACATGGCACGCCCCTATTTT 60.324 50.000 5.42 0.00 34.56 1.82
24 25 0.823460 CATGGCACGCCCCTATTTTT 59.177 50.000 5.42 0.00 34.56 1.94
25 26 2.028130 CATGGCACGCCCCTATTTTTA 58.972 47.619 5.42 0.00 34.56 1.52
26 27 2.445682 TGGCACGCCCCTATTTTTAT 57.554 45.000 5.42 0.00 34.56 1.40
27 28 3.579534 TGGCACGCCCCTATTTTTATA 57.420 42.857 5.42 0.00 34.56 0.98
28 29 3.215975 TGGCACGCCCCTATTTTTATAC 58.784 45.455 5.42 0.00 34.56 1.47
29 30 3.215975 GGCACGCCCCTATTTTTATACA 58.784 45.455 0.00 0.00 0.00 2.29
30 31 3.824443 GGCACGCCCCTATTTTTATACAT 59.176 43.478 0.00 0.00 0.00 2.29
31 32 4.279922 GGCACGCCCCTATTTTTATACATT 59.720 41.667 0.00 0.00 0.00 2.71
32 33 5.219633 GCACGCCCCTATTTTTATACATTG 58.780 41.667 0.00 0.00 0.00 2.82
33 34 5.768317 CACGCCCCTATTTTTATACATTGG 58.232 41.667 0.00 0.00 0.00 3.16
34 35 5.533154 CACGCCCCTATTTTTATACATTGGA 59.467 40.000 0.00 0.00 0.00 3.53
35 36 6.039941 CACGCCCCTATTTTTATACATTGGAA 59.960 38.462 0.00 0.00 0.00 3.53
36 37 6.608002 ACGCCCCTATTTTTATACATTGGAAA 59.392 34.615 0.00 0.00 0.00 3.13
37 38 6.921307 CGCCCCTATTTTTATACATTGGAAAC 59.079 38.462 0.00 0.00 0.00 2.78
38 39 7.416890 CGCCCCTATTTTTATACATTGGAAACA 60.417 37.037 0.00 0.00 39.83 2.83
39 40 8.428852 GCCCCTATTTTTATACATTGGAAACAT 58.571 33.333 0.00 0.00 42.32 2.71
225 226 5.845391 AAACCCAGAAAAAGAACGATTCA 57.155 34.783 0.00 0.00 0.00 2.57
226 227 5.438761 AACCCAGAAAAAGAACGATTCAG 57.561 39.130 0.00 0.00 0.00 3.02
227 228 4.461198 ACCCAGAAAAAGAACGATTCAGT 58.539 39.130 0.00 0.00 0.00 3.41
228 229 4.275936 ACCCAGAAAAAGAACGATTCAGTG 59.724 41.667 0.00 0.00 0.00 3.66
229 230 4.320494 CCCAGAAAAAGAACGATTCAGTGG 60.320 45.833 0.00 0.00 0.00 4.00
230 231 4.515191 CCAGAAAAAGAACGATTCAGTGGA 59.485 41.667 0.00 0.00 0.00 4.02
231 232 5.444122 CAGAAAAAGAACGATTCAGTGGAC 58.556 41.667 0.00 0.00 0.00 4.02
232 233 5.237344 CAGAAAAAGAACGATTCAGTGGACT 59.763 40.000 0.00 0.00 0.00 3.85
233 234 5.467063 AGAAAAAGAACGATTCAGTGGACTC 59.533 40.000 0.00 0.00 0.00 3.36
234 235 3.320673 AAGAACGATTCAGTGGACTCC 57.679 47.619 0.00 0.00 0.00 3.85
235 236 1.550976 AGAACGATTCAGTGGACTCCC 59.449 52.381 0.00 0.00 0.00 4.30
236 237 0.246635 AACGATTCAGTGGACTCCCG 59.753 55.000 0.00 0.00 34.29 5.14
237 238 1.519455 CGATTCAGTGGACTCCCGC 60.519 63.158 0.00 0.00 43.25 6.13
258 259 3.797353 CCTGTGCCGGGCCAGTAT 61.797 66.667 25.70 0.00 0.00 2.12
259 260 2.514592 CTGTGCCGGGCCAGTATG 60.515 66.667 17.97 0.00 0.00 2.39
270 271 3.313750 CAGTATGGCGCTCGCTTC 58.686 61.111 7.64 0.00 41.60 3.86
271 272 1.519234 CAGTATGGCGCTCGCTTCA 60.519 57.895 7.64 5.02 41.60 3.02
272 273 1.227089 AGTATGGCGCTCGCTTCAG 60.227 57.895 7.64 0.00 41.60 3.02
273 274 2.106938 TATGGCGCTCGCTTCAGG 59.893 61.111 7.64 0.00 41.60 3.86
274 275 2.721167 TATGGCGCTCGCTTCAGGT 61.721 57.895 7.64 0.00 41.60 4.00
275 276 2.906182 TATGGCGCTCGCTTCAGGTG 62.906 60.000 7.64 0.00 41.60 4.00
276 277 4.742201 GGCGCTCGCTTCAGGTGA 62.742 66.667 7.64 0.00 41.60 4.02
281 282 3.337398 CTCGCTTCAGGTGAGCTAC 57.663 57.895 0.00 0.00 44.18 3.58
282 283 0.524392 CTCGCTTCAGGTGAGCTACG 60.524 60.000 0.00 0.00 44.18 3.51
283 284 0.958876 TCGCTTCAGGTGAGCTACGA 60.959 55.000 0.00 0.00 0.00 3.43
284 285 0.101399 CGCTTCAGGTGAGCTACGAT 59.899 55.000 0.00 0.00 0.00 3.73
285 286 1.846541 GCTTCAGGTGAGCTACGATC 58.153 55.000 0.00 0.00 0.00 3.69
286 287 1.862008 GCTTCAGGTGAGCTACGATCG 60.862 57.143 14.88 14.88 0.00 3.69
287 288 1.671328 CTTCAGGTGAGCTACGATCGA 59.329 52.381 24.34 4.52 0.00 3.59
288 289 1.300481 TCAGGTGAGCTACGATCGAG 58.700 55.000 24.34 15.39 0.00 4.04
289 290 0.317436 CAGGTGAGCTACGATCGAGC 60.317 60.000 24.34 23.74 40.42 5.03
294 295 2.793353 GCTACGATCGAGCTCGCG 60.793 66.667 30.97 28.77 42.35 5.87
295 296 2.627004 CTACGATCGAGCTCGCGT 59.373 61.111 33.12 33.12 42.35 6.01
296 297 1.437411 CTACGATCGAGCTCGCGTC 60.437 63.158 34.11 28.49 42.35 5.19
297 298 3.206547 TACGATCGAGCTCGCGTCG 62.207 63.158 38.07 38.07 45.44 5.12
309 310 4.822503 GCGTCGAGCGAGGTATAG 57.177 61.111 13.15 0.00 44.77 1.31
310 311 1.207085 GCGTCGAGCGAGGTATAGG 59.793 63.158 13.15 0.00 44.77 2.57
311 312 1.505477 GCGTCGAGCGAGGTATAGGT 61.505 60.000 13.15 0.00 44.77 3.08
312 313 0.942962 CGTCGAGCGAGGTATAGGTT 59.057 55.000 4.58 0.00 44.77 3.50
313 314 1.070041 CGTCGAGCGAGGTATAGGTTC 60.070 57.143 4.58 0.00 44.77 3.62
314 315 1.070041 GTCGAGCGAGGTATAGGTTCG 60.070 57.143 0.00 0.00 36.03 3.95
318 319 2.422303 CGAGGTATAGGTTCGCCCA 58.578 57.895 0.00 0.00 38.27 5.36
319 320 0.966920 CGAGGTATAGGTTCGCCCAT 59.033 55.000 0.00 0.00 38.27 4.00
320 321 1.336887 CGAGGTATAGGTTCGCCCATG 60.337 57.143 0.00 0.00 38.27 3.66
321 322 0.396811 AGGTATAGGTTCGCCCATGC 59.603 55.000 0.00 0.00 38.27 4.06
322 323 0.605589 GGTATAGGTTCGCCCATGCC 60.606 60.000 0.00 0.00 38.27 4.40
323 324 0.949105 GTATAGGTTCGCCCATGCCG 60.949 60.000 0.00 0.00 38.27 5.69
324 325 1.404479 TATAGGTTCGCCCATGCCGT 61.404 55.000 4.31 0.00 38.27 5.68
325 326 1.404479 ATAGGTTCGCCCATGCCGTA 61.404 55.000 4.31 0.00 38.27 4.02
326 327 2.300850 TAGGTTCGCCCATGCCGTAC 62.301 60.000 4.31 4.99 38.27 3.67
327 328 2.435234 GTTCGCCCATGCCGTACA 60.435 61.111 8.23 0.00 0.00 2.90
328 329 2.435234 TTCGCCCATGCCGTACAC 60.435 61.111 0.00 0.00 0.00 2.90
329 330 2.949909 TTCGCCCATGCCGTACACT 61.950 57.895 0.00 0.00 0.00 3.55
330 331 2.845752 TTCGCCCATGCCGTACACTC 62.846 60.000 0.00 0.00 0.00 3.51
331 332 2.267642 GCCCATGCCGTACACTCA 59.732 61.111 0.00 0.00 0.00 3.41
332 333 1.376683 GCCCATGCCGTACACTCAA 60.377 57.895 0.00 0.00 0.00 3.02
333 334 0.958382 GCCCATGCCGTACACTCAAA 60.958 55.000 0.00 0.00 0.00 2.69
334 335 1.529226 CCCATGCCGTACACTCAAAA 58.471 50.000 0.00 0.00 0.00 2.44
335 336 1.883275 CCCATGCCGTACACTCAAAAA 59.117 47.619 0.00 0.00 0.00 1.94
336 337 2.491693 CCCATGCCGTACACTCAAAAAT 59.508 45.455 0.00 0.00 0.00 1.82
337 338 3.692101 CCCATGCCGTACACTCAAAAATA 59.308 43.478 0.00 0.00 0.00 1.40
361 365 9.689501 ATACCTCTACTAGCTACTGATATTTCC 57.310 37.037 0.00 0.00 0.00 3.13
370 374 4.323868 GCTACTGATATTTCCCCTGGATCC 60.324 50.000 4.20 4.20 0.00 3.36
372 376 4.054369 ACTGATATTTCCCCTGGATCCAA 58.946 43.478 17.00 0.00 0.00 3.53
380 384 0.033796 CCCTGGATCCAAGCATGTGT 60.034 55.000 17.00 0.00 0.00 3.72
390 394 2.669569 GCATGTGTGGTGCCGACT 60.670 61.111 0.00 0.00 36.61 4.18
391 395 2.969806 GCATGTGTGGTGCCGACTG 61.970 63.158 0.00 0.00 36.61 3.51
392 396 2.669569 ATGTGTGGTGCCGACTGC 60.670 61.111 0.00 0.00 41.77 4.40
393 397 4.927782 TGTGTGGTGCCGACTGCC 62.928 66.667 0.00 0.00 40.16 4.85
419 423 0.039074 CGATCTACCGAGCATCCACC 60.039 60.000 0.00 0.00 0.00 4.61
423 427 2.960957 CTACCGAGCATCCACCGCAG 62.961 65.000 0.00 0.00 0.00 5.18
429 433 2.267006 CATCCACCGCAGCTGAGT 59.733 61.111 20.43 11.27 0.00 3.41
434 438 1.291588 CACCGCAGCTGAGTTCTCT 59.708 57.895 20.43 0.00 0.00 3.10
438 444 0.735632 CGCAGCTGAGTTCTCTGACC 60.736 60.000 20.43 0.00 0.00 4.02
441 447 1.216710 GCTGAGTTCTCTGACCCCG 59.783 63.158 10.14 0.00 0.00 5.73
448 454 3.461773 CTCTGACCCCGGACGCAT 61.462 66.667 0.73 0.00 0.00 4.73
454 460 4.473520 CCCCGGACGCATTCTGCT 62.474 66.667 0.73 0.00 42.25 4.24
471 477 1.667830 CTGCGTCGTTGACCACCAT 60.668 57.895 0.00 0.00 0.00 3.55
625 637 4.436998 GTCACCCAGCTCGGACGG 62.437 72.222 3.62 0.00 36.56 4.79
630 642 2.105128 CCAGCTCGGACGGATGAC 59.895 66.667 0.00 0.00 36.56 3.06
631 643 2.710902 CCAGCTCGGACGGATGACA 61.711 63.158 0.00 0.00 36.56 3.58
632 644 1.226802 CAGCTCGGACGGATGACAG 60.227 63.158 0.00 0.00 0.00 3.51
633 645 2.583593 GCTCGGACGGATGACAGC 60.584 66.667 0.00 0.00 0.00 4.40
634 646 2.885113 CTCGGACGGATGACAGCA 59.115 61.111 0.00 0.00 0.00 4.41
635 647 1.517257 CTCGGACGGATGACAGCAC 60.517 63.158 0.00 0.00 0.00 4.40
636 648 1.938657 CTCGGACGGATGACAGCACT 61.939 60.000 0.00 0.00 0.00 4.40
681 699 2.349886 CGGAAAAATCCAGAGAAGCGAG 59.650 50.000 0.00 0.00 0.00 5.03
689 707 1.610673 AGAGAAGCGAGAAGGCCCA 60.611 57.895 0.00 0.00 0.00 5.36
690 708 1.153469 GAGAAGCGAGAAGGCCCAG 60.153 63.158 0.00 0.00 0.00 4.45
691 709 2.821810 GAAGCGAGAAGGCCCAGC 60.822 66.667 0.00 0.00 0.00 4.85
692 710 3.612247 GAAGCGAGAAGGCCCAGCA 62.612 63.158 0.00 0.00 0.00 4.41
693 711 3.909086 AAGCGAGAAGGCCCAGCAC 62.909 63.158 0.00 0.00 0.00 4.40
694 712 4.704833 GCGAGAAGGCCCAGCACA 62.705 66.667 0.00 0.00 0.00 4.57
698 716 2.362120 GAAGGCCCAGCACAGCAT 60.362 61.111 0.00 0.00 0.00 3.79
703 721 2.270257 GCCCAGCACAGCATCACAA 61.270 57.895 0.00 0.00 0.00 3.33
737 755 1.070309 CACGCAGAGACAAAAGCTCAC 60.070 52.381 0.00 0.00 34.85 3.51
778 796 3.213402 GAGCGAGAGGGAGGGACG 61.213 72.222 0.00 0.00 0.00 4.79
780 798 2.519780 GCGAGAGGGAGGGACGAT 60.520 66.667 0.00 0.00 0.00 3.73
785 810 2.444895 AGGGAGGGACGATGGAGC 60.445 66.667 0.00 0.00 0.00 4.70
808 833 1.609841 CCCTCCCCGCCGTATAAAATC 60.610 57.143 0.00 0.00 0.00 2.17
815 840 1.804601 GCCGTATAAAATCCCCCTCG 58.195 55.000 0.00 0.00 0.00 4.63
889 914 1.619332 TGCGGTGTATACTTGTGTGGA 59.381 47.619 4.17 0.00 0.00 4.02
892 917 2.671396 CGGTGTATACTTGTGTGGAAGC 59.329 50.000 4.17 0.00 0.00 3.86
897 922 2.741486 TACTTGTGTGGAAGCCGGCC 62.741 60.000 26.15 8.83 0.00 6.13
912 937 4.527583 GCCAGCGAGAGAGCCCAG 62.528 72.222 0.00 0.00 38.01 4.45
913 938 2.757508 CCAGCGAGAGAGCCCAGA 60.758 66.667 0.00 0.00 38.01 3.86
914 939 2.132996 CCAGCGAGAGAGCCCAGAT 61.133 63.158 0.00 0.00 38.01 2.90
915 940 1.067749 CAGCGAGAGAGCCCAGATG 59.932 63.158 0.00 0.00 38.01 2.90
916 941 2.280052 GCGAGAGAGCCCAGATGC 60.280 66.667 0.00 0.00 0.00 3.91
917 942 2.795110 GCGAGAGAGCCCAGATGCT 61.795 63.158 0.00 0.00 46.37 3.79
918 943 1.821936 CGAGAGAGCCCAGATGCTT 59.178 57.895 0.00 0.00 42.95 3.91
949 992 2.266055 CGGAGCTTGGAGGTGGAC 59.734 66.667 0.00 0.00 0.00 4.02
956 1007 0.911769 CTTGGAGGTGGACCATAGCA 59.088 55.000 0.00 0.00 37.26 3.49
979 1039 1.446272 CGGTGCTCCCTCTTCGTTC 60.446 63.158 0.00 0.00 0.00 3.95
989 1049 1.419374 CTCTTCGTTCTCGTTGTGGG 58.581 55.000 0.00 0.00 38.33 4.61
1126 1200 0.691748 CCCCAACCCCATGCATTCAT 60.692 55.000 0.00 0.00 0.00 2.57
1192 1298 1.320507 TGTGTCTGTGCATGCATGTT 58.679 45.000 25.64 0.00 0.00 2.71
1196 1302 3.684305 GTGTCTGTGCATGCATGTTACTA 59.316 43.478 25.64 15.14 0.00 1.82
1197 1303 3.684305 TGTCTGTGCATGCATGTTACTAC 59.316 43.478 25.64 23.07 0.00 2.73
1206 1312 3.394719 TGCATGTTACTACTTTCGTGCA 58.605 40.909 6.78 6.78 46.05 4.57
1209 1315 4.334443 CATGTTACTACTTTCGTGCATGC 58.666 43.478 11.82 11.82 0.00 4.06
1217 1323 4.439305 ACTTTCGTGCATGCATTTATGT 57.561 36.364 25.64 16.84 0.00 2.29
1235 1341 6.942532 TTATGTATCCTTGTTCTTGGATGC 57.057 37.500 4.92 4.28 42.46 3.91
1253 1359 1.371183 CAGGAAGCGTGTCCTTGGA 59.629 57.895 6.32 0.00 46.42 3.53
1335 1443 2.103941 CTCCCTCTACCTGATGCCTTTC 59.896 54.545 0.00 0.00 0.00 2.62
1356 1464 7.599245 CCTTTCCCGTTCTTGTAGATGTATATC 59.401 40.741 0.00 0.00 0.00 1.63
1388 1497 6.691388 CCTTAAGCGGATTAAATTAGTTGTGC 59.309 38.462 0.00 0.00 32.98 4.57
1421 1530 4.870426 AGATGCCGAATGTTACTTGTACAG 59.130 41.667 0.00 0.00 0.00 2.74
1429 1538 7.220300 CCGAATGTTACTTGTACAGAGTCATAC 59.780 40.741 12.14 10.26 0.00 2.39
1430 1539 7.044901 CGAATGTTACTTGTACAGAGTCATACG 60.045 40.741 12.14 9.26 0.00 3.06
1431 1540 6.564709 TGTTACTTGTACAGAGTCATACGT 57.435 37.500 12.14 0.00 0.00 3.57
1432 1541 7.671495 TGTTACTTGTACAGAGTCATACGTA 57.329 36.000 12.14 0.00 0.00 3.57
1509 1618 0.538287 GCTTGCCTGTTCCCTTGTCT 60.538 55.000 0.00 0.00 0.00 3.41
1537 1646 1.066303 CGTTCAGAGGCTCGAAGCTAT 59.934 52.381 17.76 0.00 41.99 2.97
1548 1657 1.783284 CGAAGCTATCGCATAAGGCA 58.217 50.000 5.58 0.00 45.89 4.75
1549 1658 2.341257 CGAAGCTATCGCATAAGGCAT 58.659 47.619 5.58 0.00 45.89 4.40
1550 1659 3.511699 CGAAGCTATCGCATAAGGCATA 58.488 45.455 5.58 0.00 45.89 3.14
1551 1660 3.926527 CGAAGCTATCGCATAAGGCATAA 59.073 43.478 5.58 0.00 45.89 1.90
1553 1662 4.271696 AGCTATCGCATAAGGCATAACA 57.728 40.909 0.00 0.00 45.17 2.41
1554 1663 4.836825 AGCTATCGCATAAGGCATAACAT 58.163 39.130 0.00 0.00 45.17 2.71
1556 1665 6.586344 AGCTATCGCATAAGGCATAACATAT 58.414 36.000 0.00 0.00 45.17 1.78
1557 1666 7.050377 AGCTATCGCATAAGGCATAACATATT 58.950 34.615 0.00 0.00 45.17 1.28
1558 1667 7.554118 AGCTATCGCATAAGGCATAACATATTT 59.446 33.333 0.00 0.00 45.17 1.40
1559 1668 7.852945 GCTATCGCATAAGGCATAACATATTTC 59.147 37.037 0.00 0.00 45.17 2.17
1560 1669 7.928307 ATCGCATAAGGCATAACATATTTCT 57.072 32.000 0.00 0.00 45.17 2.52
1561 1670 7.132694 TCGCATAAGGCATAACATATTTCTG 57.867 36.000 0.00 0.00 45.17 3.02
1586 1790 1.771255 CCATTTGACTAGGGAGGGAGG 59.229 57.143 0.00 0.00 0.00 4.30
1726 1930 1.875963 CATGTGACCTTTGGACGCC 59.124 57.895 0.00 0.00 0.00 5.68
1740 1944 2.125147 CGCCCGGAAGAGCATTCA 60.125 61.111 0.73 0.00 0.00 2.57
1783 1991 0.107993 AGTGCACTGATCCCATGTCG 60.108 55.000 20.97 0.00 0.00 4.35
1860 2068 3.379445 CGTGGCCACTCCGGTACT 61.379 66.667 32.28 0.00 37.80 2.73
1861 2069 2.577593 GTGGCCACTCCGGTACTC 59.422 66.667 29.12 0.00 37.80 2.59
1864 2072 3.468140 GCCACTCCGGTACTCCCC 61.468 72.222 0.00 0.00 36.97 4.81
1865 2073 2.038329 CCACTCCGGTACTCCCCA 59.962 66.667 0.00 0.00 0.00 4.96
1866 2074 2.356780 CCACTCCGGTACTCCCCAC 61.357 68.421 0.00 0.00 0.00 4.61
1867 2075 1.608336 CACTCCGGTACTCCCCACA 60.608 63.158 0.00 0.00 0.00 4.17
1868 2076 1.156803 ACTCCGGTACTCCCCACAA 59.843 57.895 0.00 0.00 0.00 3.33
1869 2077 0.472352 ACTCCGGTACTCCCCACAAA 60.472 55.000 0.00 0.00 0.00 2.83
1870 2078 0.036671 CTCCGGTACTCCCCACAAAC 60.037 60.000 0.00 0.00 0.00 2.93
1871 2079 1.002990 CCGGTACTCCCCACAAACC 60.003 63.158 0.00 0.00 0.00 3.27
1872 2080 1.756024 CGGTACTCCCCACAAACCA 59.244 57.895 0.00 0.00 0.00 3.67
1874 2082 1.271707 CGGTACTCCCCACAAACCATT 60.272 52.381 0.00 0.00 0.00 3.16
1875 2083 2.816337 CGGTACTCCCCACAAACCATTT 60.816 50.000 0.00 0.00 0.00 2.32
1876 2084 2.560981 GGTACTCCCCACAAACCATTTG 59.439 50.000 0.00 0.00 45.95 2.32
1877 2085 1.047801 ACTCCCCACAAACCATTTGC 58.952 50.000 1.23 0.00 44.39 3.68
1878 2086 1.341080 CTCCCCACAAACCATTTGCT 58.659 50.000 1.23 0.00 44.39 3.91
1879 2087 1.001181 CTCCCCACAAACCATTTGCTG 59.999 52.381 1.23 0.49 44.39 4.41
1880 2088 0.758123 CCCCACAAACCATTTGCTGT 59.242 50.000 1.23 0.00 44.39 4.40
1881 2089 1.967066 CCCCACAAACCATTTGCTGTA 59.033 47.619 1.23 0.00 44.39 2.74
1882 2090 2.288763 CCCCACAAACCATTTGCTGTAC 60.289 50.000 1.23 0.00 44.39 2.90
1883 2091 2.627699 CCCACAAACCATTTGCTGTACT 59.372 45.455 1.23 0.00 44.39 2.73
1884 2092 3.823873 CCCACAAACCATTTGCTGTACTA 59.176 43.478 1.23 0.00 44.39 1.82
1885 2093 4.462483 CCCACAAACCATTTGCTGTACTAT 59.538 41.667 1.23 0.00 44.39 2.12
1886 2094 5.650266 CCCACAAACCATTTGCTGTACTATA 59.350 40.000 1.23 0.00 44.39 1.31
1887 2095 6.321181 CCCACAAACCATTTGCTGTACTATAT 59.679 38.462 1.23 0.00 44.39 0.86
1888 2096 7.500892 CCCACAAACCATTTGCTGTACTATATA 59.499 37.037 1.23 0.00 44.39 0.86
1889 2097 8.342634 CCACAAACCATTTGCTGTACTATATAC 58.657 37.037 1.23 0.00 44.39 1.47
1890 2098 9.109393 CACAAACCATTTGCTGTACTATATACT 57.891 33.333 1.23 0.00 44.39 2.12
1891 2099 9.681062 ACAAACCATTTGCTGTACTATATACTT 57.319 29.630 1.23 0.00 44.39 2.24
1892 2100 9.935682 CAAACCATTTGCTGTACTATATACTTG 57.064 33.333 0.00 0.00 33.36 3.16
1893 2101 9.681062 AAACCATTTGCTGTACTATATACTTGT 57.319 29.630 0.00 0.00 0.00 3.16
1901 2109 9.458727 TGCTGTACTATATACTTGTATACTCCC 57.541 37.037 4.17 0.00 0.00 4.30
1902 2110 9.683870 GCTGTACTATATACTTGTATACTCCCT 57.316 37.037 4.17 0.00 0.00 4.20
1905 2113 9.323985 GTACTATATACTTGTATACTCCCTCCG 57.676 40.741 4.17 0.00 0.00 4.63
1906 2114 7.926705 ACTATATACTTGTATACTCCCTCCGT 58.073 38.462 4.17 0.00 0.00 4.69
1907 2115 8.389366 ACTATATACTTGTATACTCCCTCCGTT 58.611 37.037 4.17 0.00 0.00 4.44
1908 2116 9.240734 CTATATACTTGTATACTCCCTCCGTTT 57.759 37.037 4.17 0.00 0.00 3.60
1909 2117 4.732672 ACTTGTATACTCCCTCCGTTTC 57.267 45.455 4.17 0.00 0.00 2.78
1910 2118 4.351127 ACTTGTATACTCCCTCCGTTTCT 58.649 43.478 4.17 0.00 0.00 2.52
1911 2119 5.513233 ACTTGTATACTCCCTCCGTTTCTA 58.487 41.667 4.17 0.00 0.00 2.10
1912 2120 5.954150 ACTTGTATACTCCCTCCGTTTCTAA 59.046 40.000 4.17 0.00 0.00 2.10
1913 2121 6.438425 ACTTGTATACTCCCTCCGTTTCTAAA 59.562 38.462 4.17 0.00 0.00 1.85
1914 2122 7.125356 ACTTGTATACTCCCTCCGTTTCTAAAT 59.875 37.037 4.17 0.00 0.00 1.40
1915 2123 8.537728 TTGTATACTCCCTCCGTTTCTAAATA 57.462 34.615 4.17 0.00 0.00 1.40
1916 2124 7.945134 TGTATACTCCCTCCGTTTCTAAATAC 58.055 38.462 4.17 0.00 0.00 1.89
1917 2125 7.781693 TGTATACTCCCTCCGTTTCTAAATACT 59.218 37.037 4.17 0.00 0.00 2.12
1918 2126 7.672122 ATACTCCCTCCGTTTCTAAATACTT 57.328 36.000 0.00 0.00 0.00 2.24
1919 2127 5.731591 ACTCCCTCCGTTTCTAAATACTTG 58.268 41.667 0.00 0.00 0.00 3.16
1920 2128 5.247792 ACTCCCTCCGTTTCTAAATACTTGT 59.752 40.000 0.00 0.00 0.00 3.16
1921 2129 5.727434 TCCCTCCGTTTCTAAATACTTGTC 58.273 41.667 0.00 0.00 0.00 3.18
1922 2130 5.482878 TCCCTCCGTTTCTAAATACTTGTCT 59.517 40.000 0.00 0.00 0.00 3.41
1923 2131 6.013984 TCCCTCCGTTTCTAAATACTTGTCTT 60.014 38.462 0.00 0.00 0.00 3.01
1924 2132 6.653740 CCCTCCGTTTCTAAATACTTGTCTTT 59.346 38.462 0.00 0.00 0.00 2.52
1925 2133 7.148457 CCCTCCGTTTCTAAATACTTGTCTTTC 60.148 40.741 0.00 0.00 0.00 2.62
1926 2134 7.603024 CCTCCGTTTCTAAATACTTGTCTTTCT 59.397 37.037 0.00 0.00 0.00 2.52
1927 2135 9.635520 CTCCGTTTCTAAATACTTGTCTTTCTA 57.364 33.333 0.00 0.00 0.00 2.10
1928 2136 9.635520 TCCGTTTCTAAATACTTGTCTTTCTAG 57.364 33.333 0.00 0.00 0.00 2.43
1929 2137 9.420551 CCGTTTCTAAATACTTGTCTTTCTAGT 57.579 33.333 0.00 0.00 36.28 2.57
1939 2147 9.778741 ATACTTGTCTTTCTAGTCATTTCAACA 57.221 29.630 0.00 0.00 34.37 3.33
1940 2148 8.506168 ACTTGTCTTTCTAGTCATTTCAACAA 57.494 30.769 0.00 0.00 0.00 2.83
1941 2149 8.956426 ACTTGTCTTTCTAGTCATTTCAACAAA 58.044 29.630 0.00 0.00 0.00 2.83
1942 2150 9.956720 CTTGTCTTTCTAGTCATTTCAACAAAT 57.043 29.630 0.00 0.00 31.91 2.32
2019 2227 7.342769 ACATCCGTATGTAGTAGTCATTTGA 57.657 36.000 0.00 0.00 44.66 2.69
2020 2228 7.778083 ACATCCGTATGTAGTAGTCATTTGAA 58.222 34.615 0.00 0.00 44.66 2.69
2021 2229 8.255206 ACATCCGTATGTAGTAGTCATTTGAAA 58.745 33.333 0.00 0.00 44.66 2.69
2022 2230 9.261180 CATCCGTATGTAGTAGTCATTTGAAAT 57.739 33.333 0.00 0.00 0.00 2.17
2023 2231 8.642908 TCCGTATGTAGTAGTCATTTGAAATG 57.357 34.615 11.54 11.54 0.00 2.32
2024 2232 8.255206 TCCGTATGTAGTAGTCATTTGAAATGT 58.745 33.333 16.62 2.38 0.00 2.71
2025 2233 8.540492 CCGTATGTAGTAGTCATTTGAAATGTC 58.460 37.037 16.62 11.74 0.00 3.06
2026 2234 9.302345 CGTATGTAGTAGTCATTTGAAATGTCT 57.698 33.333 18.62 18.62 0.00 3.41
2053 2261 7.625828 AAAGACAAATATTTAGGAACGGAGG 57.374 36.000 0.00 0.00 0.00 4.30
2054 2262 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
2055 2263 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
2081 2289 1.075836 TATTGCACCCACCCACACC 59.924 57.895 0.00 0.00 0.00 4.16
2129 2338 3.810896 GAACATTCCCGGTGCGGC 61.811 66.667 0.00 0.00 46.86 6.53
2171 2382 3.437741 TGCAAACTGAGTACATGCATCTG 59.562 43.478 14.14 0.00 41.67 2.90
2190 2404 7.933033 TGCATCTGTATGTATATTCAGCTTGAA 59.067 33.333 1.82 1.85 36.79 2.69
2378 2595 2.657066 GGGAGGGGGTGAAGTCGAC 61.657 68.421 7.70 7.70 0.00 4.20
2380 2597 1.609794 GAGGGGGTGAAGTCGACCT 60.610 63.158 13.01 0.00 33.58 3.85
2383 2600 2.432628 GGGTGAAGTCGACCTGCG 60.433 66.667 13.01 0.00 42.69 5.18
2386 2603 1.444553 GTGAAGTCGACCTGCGGAG 60.445 63.158 13.01 0.00 41.33 4.63
2419 2636 8.908095 TGTATAGGGAGATTAGTAATGGGTCTA 58.092 37.037 0.00 0.00 0.00 2.59
2420 2637 9.411189 GTATAGGGAGATTAGTAATGGGTCTAG 57.589 40.741 0.00 0.00 0.00 2.43
2421 2638 5.088026 AGGGAGATTAGTAATGGGTCTAGC 58.912 45.833 0.00 0.00 0.00 3.42
2482 2726 4.250464 CGGGTTAAACATGTCTCTGCTAA 58.750 43.478 0.00 0.00 0.00 3.09
2488 2732 3.773860 ACATGTCTCTGCTAACTCTCG 57.226 47.619 0.00 0.00 0.00 4.04
2493 2737 3.055747 TGTCTCTGCTAACTCTCGAGAGA 60.056 47.826 41.49 23.54 44.74 3.10
2499 2743 3.440872 TGCTAACTCTCGAGAGAAAGGAC 59.559 47.826 41.49 25.96 44.74 3.85
2500 2744 3.486209 GCTAACTCTCGAGAGAAAGGACG 60.486 52.174 41.49 23.63 44.74 4.79
2503 2747 1.668751 CTCTCGAGAGAAAGGACGGAG 59.331 57.143 34.30 6.06 44.74 4.63
2504 2748 0.099791 CTCGAGAGAAAGGACGGAGC 59.900 60.000 6.58 0.00 41.32 4.70
2509 2753 1.630878 AGAGAAAGGACGGAGCCATTT 59.369 47.619 0.00 0.00 0.00 2.32
2518 2762 3.869832 GGACGGAGCCATTTTAACTACTC 59.130 47.826 0.00 0.00 0.00 2.59
2519 2763 3.869832 GACGGAGCCATTTTAACTACTCC 59.130 47.826 0.00 0.00 40.26 3.85
2524 2811 7.091443 CGGAGCCATTTTAACTACTCCTATAG 58.909 42.308 0.00 0.00 41.26 1.31
2539 2826 4.341487 TCCTATAGTATATGCGTGTGCCT 58.659 43.478 0.00 0.00 41.78 4.75
2545 2832 2.462456 ATATGCGTGTGCCTCTATGG 57.538 50.000 0.00 0.00 41.78 2.74
2548 2835 1.257750 TGCGTGTGCCTCTATGGTCT 61.258 55.000 0.00 0.00 41.78 3.85
2549 2836 0.744874 GCGTGTGCCTCTATGGTCTA 59.255 55.000 0.00 0.00 38.35 2.59
2550 2837 1.341531 GCGTGTGCCTCTATGGTCTAT 59.658 52.381 0.00 0.00 38.35 1.98
2551 2838 2.864097 GCGTGTGCCTCTATGGTCTATG 60.864 54.545 0.00 0.00 38.35 2.23
2552 2839 2.760374 GTGTGCCTCTATGGTCTATGC 58.240 52.381 0.00 0.00 38.35 3.14
2553 2840 1.694150 TGTGCCTCTATGGTCTATGCC 59.306 52.381 0.00 0.00 38.35 4.40
2554 2841 1.002544 GTGCCTCTATGGTCTATGCCC 59.997 57.143 0.00 0.00 38.35 5.36
2555 2842 1.352083 GCCTCTATGGTCTATGCCCA 58.648 55.000 0.00 0.00 38.35 5.36
2556 2843 1.912043 GCCTCTATGGTCTATGCCCAT 59.088 52.381 0.00 0.00 44.76 4.00
2557 2844 2.355513 GCCTCTATGGTCTATGCCCATG 60.356 54.545 2.24 0.00 42.63 3.66
2558 2845 2.909006 CCTCTATGGTCTATGCCCATGT 59.091 50.000 2.24 0.00 42.63 3.21
2559 2846 3.328931 CCTCTATGGTCTATGCCCATGTT 59.671 47.826 2.24 0.00 42.63 2.71
2561 2848 5.380043 CTCTATGGTCTATGCCCATGTTTT 58.620 41.667 2.24 0.00 42.63 2.43
2563 2850 5.827797 TCTATGGTCTATGCCCATGTTTTTC 59.172 40.000 2.24 0.00 42.63 2.29
2567 2854 5.306678 TGGTCTATGCCCATGTTTTTCTTTT 59.693 36.000 0.00 0.00 0.00 2.27
2568 2855 5.869344 GGTCTATGCCCATGTTTTTCTTTTC 59.131 40.000 0.00 0.00 0.00 2.29
2571 2858 7.657354 GTCTATGCCCATGTTTTTCTTTTCTTT 59.343 33.333 0.00 0.00 0.00 2.52
2574 2861 7.082700 TGCCCATGTTTTTCTTTTCTTTTTC 57.917 32.000 0.00 0.00 0.00 2.29
2591 2878 5.415701 TCTTTTTCTGATTGAGTATGGCCAC 59.584 40.000 8.16 0.00 0.00 5.01
2598 4268 0.037697 TGAGTATGGCCACGTGTGTC 60.038 55.000 8.16 8.23 0.00 3.67
2609 4279 2.375110 CACGTGTGTCTGTCAATTTGC 58.625 47.619 7.58 0.00 0.00 3.68
2615 4285 3.313249 TGTGTCTGTCAATTTGCACTCAG 59.687 43.478 0.00 5.53 0.00 3.35
2622 4292 2.287644 TCAATTTGCACTCAGTGACACG 59.712 45.455 9.70 0.00 35.23 4.49
2632 4302 3.804325 ACTCAGTGACACGAAATGAACAG 59.196 43.478 0.00 0.00 0.00 3.16
2667 4337 5.860716 GCAGAATTCTACCTTTGCTTCTTTG 59.139 40.000 7.86 0.00 0.00 2.77
2672 4342 4.324267 TCTACCTTTGCTTCTTTGGCTAC 58.676 43.478 0.00 0.00 0.00 3.58
2679 4349 5.897377 TTGCTTCTTTGGCTACCTATTTC 57.103 39.130 0.00 0.00 0.00 2.17
2682 4352 4.944317 GCTTCTTTGGCTACCTATTTCAGT 59.056 41.667 0.00 0.00 0.00 3.41
2684 4354 6.403746 GCTTCTTTGGCTACCTATTTCAGTTC 60.404 42.308 0.00 0.00 0.00 3.01
2685 4355 5.175859 TCTTTGGCTACCTATTTCAGTTCG 58.824 41.667 0.00 0.00 0.00 3.95
2686 4356 3.536956 TGGCTACCTATTTCAGTTCGG 57.463 47.619 0.00 0.00 0.00 4.30
2687 4357 2.169769 TGGCTACCTATTTCAGTTCGGG 59.830 50.000 0.00 0.00 0.00 5.14
2688 4358 2.433239 GGCTACCTATTTCAGTTCGGGA 59.567 50.000 0.00 0.00 0.00 5.14
2689 4359 3.492829 GGCTACCTATTTCAGTTCGGGAG 60.493 52.174 0.00 0.00 0.00 4.30
2690 4360 3.383825 GCTACCTATTTCAGTTCGGGAGA 59.616 47.826 0.00 0.00 0.00 3.71
2717 4387 4.767578 ATGCTCCTCAATAGTGACACAT 57.232 40.909 8.59 0.00 0.00 3.21
2720 4390 5.419542 TGCTCCTCAATAGTGACACATTAC 58.580 41.667 8.59 0.00 0.00 1.89
2725 4395 8.319057 TCCTCAATAGTGACACATTACCTATT 57.681 34.615 8.59 0.00 0.00 1.73
2738 4408 8.999431 ACACATTACCTATTTGTAAGTTGACTG 58.001 33.333 0.00 0.00 34.41 3.51
2745 4415 8.082242 ACCTATTTGTAAGTTGACTGAATTTGC 58.918 33.333 0.00 0.00 0.00 3.68
2752 4422 5.534207 AGTTGACTGAATTTGCATTTGGA 57.466 34.783 0.00 0.00 0.00 3.53
2773 4443 6.980577 TGGATAAGTTGATTTTATGGGAGGT 58.019 36.000 0.00 0.00 0.00 3.85
2803 4488 6.125589 AGCTGAAGGAAGAAGAAAGAAGAT 57.874 37.500 0.00 0.00 0.00 2.40
2805 4490 7.102993 AGCTGAAGGAAGAAGAAAGAAGATAC 58.897 38.462 0.00 0.00 0.00 2.24
2806 4491 7.038373 AGCTGAAGGAAGAAGAAAGAAGATACT 60.038 37.037 0.00 0.00 0.00 2.12
2879 4643 2.564771 TGAAGCACCTTCTCAACTGTG 58.435 47.619 6.54 0.00 40.73 3.66
2882 4646 4.040339 TGAAGCACCTTCTCAACTGTGATA 59.960 41.667 6.54 0.00 40.73 2.15
2883 4647 4.199432 AGCACCTTCTCAACTGTGATAG 57.801 45.455 0.00 0.00 31.85 2.08
2885 4649 3.681897 GCACCTTCTCAACTGTGATAGTG 59.318 47.826 0.00 7.06 40.26 2.74
2902 4671 7.041848 TGTGATAGTGATCAACAGTTCAACAAG 60.042 37.037 0.00 0.00 43.77 3.16
2904 4673 3.885297 AGTGATCAACAGTTCAACAAGGG 59.115 43.478 0.00 0.00 0.00 3.95
3021 4790 9.212641 CAACATATATCAACAGATCTGTAAGGG 57.787 37.037 28.10 17.27 44.13 3.95
3022 4791 7.911651 ACATATATCAACAGATCTGTAAGGGG 58.088 38.462 28.10 15.01 44.13 4.79
3030 4802 2.105766 GATCTGTAAGGGGTGTACGGT 58.894 52.381 0.00 0.00 0.00 4.83
3042 4814 3.370739 GGGTGTACGGTTTGATATGGGAA 60.371 47.826 0.00 0.00 0.00 3.97
3055 4827 2.284405 GGGAACAGAGGGGTCGGA 60.284 66.667 0.00 0.00 0.00 4.55
3071 4843 4.501058 GGGTCGGACGATTAGAAGCTAAAT 60.501 45.833 1.43 0.00 0.00 1.40
3072 4844 5.278660 GGGTCGGACGATTAGAAGCTAAATA 60.279 44.000 1.43 0.00 0.00 1.40
3087 4859 4.453819 AGCTAAATAAATCTGGATCGCTGC 59.546 41.667 0.00 0.00 0.00 5.25
3088 4860 3.885484 AAATAAATCTGGATCGCTGCG 57.115 42.857 17.25 17.25 0.00 5.18
3090 4862 0.249868 TAAATCTGGATCGCTGCGGG 60.250 55.000 23.03 7.73 0.00 6.13
3091 4863 4.615815 ATCTGGATCGCTGCGGGC 62.616 66.667 23.03 13.86 37.64 6.13
3114 4891 4.621747 CGTTCCTTTGGAGATAAGCAGAGT 60.622 45.833 0.00 0.00 31.21 3.24
3115 4892 4.478206 TCCTTTGGAGATAAGCAGAGTG 57.522 45.455 0.00 0.00 0.00 3.51
3129 4906 2.481969 GCAGAGTGATAAGCATGGACGA 60.482 50.000 0.00 0.00 0.00 4.20
3130 4907 3.379240 CAGAGTGATAAGCATGGACGAG 58.621 50.000 0.00 0.00 0.00 4.18
3131 4908 3.067320 CAGAGTGATAAGCATGGACGAGA 59.933 47.826 0.00 0.00 0.00 4.04
3132 4909 3.701542 AGAGTGATAAGCATGGACGAGAA 59.298 43.478 0.00 0.00 0.00 2.87
3133 4910 4.160439 AGAGTGATAAGCATGGACGAGAAA 59.840 41.667 0.00 0.00 0.00 2.52
3134 4911 5.028549 AGTGATAAGCATGGACGAGAAAT 57.971 39.130 0.00 0.00 0.00 2.17
3135 4912 5.053145 AGTGATAAGCATGGACGAGAAATC 58.947 41.667 0.00 0.00 0.00 2.17
3136 4913 4.212214 GTGATAAGCATGGACGAGAAATCC 59.788 45.833 0.00 0.00 36.70 3.01
3137 4914 4.101585 TGATAAGCATGGACGAGAAATCCT 59.898 41.667 0.00 0.00 37.13 3.24
3138 4915 5.304357 TGATAAGCATGGACGAGAAATCCTA 59.696 40.000 0.00 0.00 37.13 2.94
3139 4916 4.696479 AAGCATGGACGAGAAATCCTAT 57.304 40.909 0.00 0.00 37.13 2.57
3140 4917 5.808366 AAGCATGGACGAGAAATCCTATA 57.192 39.130 0.00 0.00 37.13 1.31
3141 4918 6.365970 AAGCATGGACGAGAAATCCTATAT 57.634 37.500 0.00 0.00 37.13 0.86
3142 4919 7.482169 AAGCATGGACGAGAAATCCTATATA 57.518 36.000 0.00 0.00 37.13 0.86
3143 4920 6.868622 AGCATGGACGAGAAATCCTATATAC 58.131 40.000 0.00 0.00 37.13 1.47
3144 4921 6.043411 GCATGGACGAGAAATCCTATATACC 58.957 44.000 0.00 0.00 37.13 2.73
3145 4922 5.892160 TGGACGAGAAATCCTATATACCG 57.108 43.478 0.00 0.00 37.13 4.02
3146 4923 4.157289 TGGACGAGAAATCCTATATACCGC 59.843 45.833 0.00 0.00 37.13 5.68
3147 4924 4.398673 GGACGAGAAATCCTATATACCGCT 59.601 45.833 0.00 0.00 33.03 5.52
3148 4925 5.587844 GGACGAGAAATCCTATATACCGCTA 59.412 44.000 0.00 0.00 33.03 4.26
3149 4926 6.094603 GGACGAGAAATCCTATATACCGCTAA 59.905 42.308 0.00 0.00 33.03 3.09
3150 4927 6.850555 ACGAGAAATCCTATATACCGCTAAC 58.149 40.000 0.00 0.00 0.00 2.34
3151 4928 6.658391 ACGAGAAATCCTATATACCGCTAACT 59.342 38.462 0.00 0.00 0.00 2.24
3152 4929 6.967767 CGAGAAATCCTATATACCGCTAACTG 59.032 42.308 0.00 0.00 0.00 3.16
3153 4930 7.361885 CGAGAAATCCTATATACCGCTAACTGT 60.362 40.741 0.00 0.00 0.00 3.55
3154 4931 7.603651 AGAAATCCTATATACCGCTAACTGTG 58.396 38.462 0.00 0.00 0.00 3.66
3162 4939 1.981254 CCGCTAACTGTGGCAAATTG 58.019 50.000 0.00 0.00 39.73 2.32
3163 4940 1.339711 CGCTAACTGTGGCAAATTGC 58.660 50.000 9.87 9.87 44.08 3.56
3172 4949 2.182537 GCAAATTGCCCCTGCGAG 59.817 61.111 6.72 0.00 41.78 5.03
3173 4950 2.182537 CAAATTGCCCCTGCGAGC 59.817 61.111 0.00 0.00 41.78 5.03
3174 4951 2.283101 AAATTGCCCCTGCGAGCA 60.283 55.556 0.00 0.00 41.78 4.26
3175 4952 2.345760 AAATTGCCCCTGCGAGCAG 61.346 57.895 17.44 17.44 40.73 4.24
3190 4967 4.697756 CAGCGAGCAAACCGGGGA 62.698 66.667 6.32 0.00 0.00 4.81
3191 4968 3.717294 AGCGAGCAAACCGGGGAT 61.717 61.111 6.32 0.00 0.00 3.85
3192 4969 3.508840 GCGAGCAAACCGGGGATG 61.509 66.667 6.32 2.24 0.00 3.51
3193 4970 2.824041 CGAGCAAACCGGGGATGG 60.824 66.667 6.32 0.00 0.00 3.51
3194 4971 2.440247 GAGCAAACCGGGGATGGG 60.440 66.667 6.32 0.00 0.00 4.00
3195 4972 3.264845 AGCAAACCGGGGATGGGT 61.265 61.111 6.32 0.00 40.20 4.51
3196 4973 2.754254 GCAAACCGGGGATGGGTC 60.754 66.667 6.32 0.00 36.57 4.46
3197 4974 2.760477 CAAACCGGGGATGGGTCA 59.240 61.111 6.32 0.00 36.57 4.02
3198 4975 1.378514 CAAACCGGGGATGGGTCAG 60.379 63.158 6.32 0.00 36.57 3.51
3199 4976 1.850755 AAACCGGGGATGGGTCAGT 60.851 57.895 6.32 0.00 36.57 3.41
3200 4977 1.848886 AAACCGGGGATGGGTCAGTC 61.849 60.000 6.32 0.00 36.57 3.51
3201 4978 3.480133 CCGGGGATGGGTCAGTCC 61.480 72.222 0.00 0.00 0.00 3.85
3202 4979 2.687200 CGGGGATGGGTCAGTCCA 60.687 66.667 0.00 0.00 41.60 4.02
3203 4980 2.297895 CGGGGATGGGTCAGTCCAA 61.298 63.158 0.00 0.00 40.62 3.53
3204 4981 1.609783 GGGGATGGGTCAGTCCAAG 59.390 63.158 0.00 0.00 40.62 3.61
3205 4982 1.208165 GGGGATGGGTCAGTCCAAGT 61.208 60.000 0.00 0.00 40.62 3.16
3206 4983 1.580059 GGGATGGGTCAGTCCAAGTA 58.420 55.000 0.00 0.00 40.62 2.24
3207 4984 1.486726 GGGATGGGTCAGTCCAAGTAG 59.513 57.143 0.00 0.00 40.62 2.57
3208 4985 1.134371 GGATGGGTCAGTCCAAGTAGC 60.134 57.143 0.00 0.00 40.62 3.58
3209 4986 1.834263 GATGGGTCAGTCCAAGTAGCT 59.166 52.381 0.00 0.00 40.62 3.32
3210 4987 2.615986 TGGGTCAGTCCAAGTAGCTA 57.384 50.000 0.00 0.00 38.11 3.32
3211 4988 2.897350 TGGGTCAGTCCAAGTAGCTAA 58.103 47.619 0.00 0.00 38.11 3.09
3212 4989 2.832129 TGGGTCAGTCCAAGTAGCTAAG 59.168 50.000 0.00 0.00 38.11 2.18
3213 4990 3.097614 GGGTCAGTCCAAGTAGCTAAGA 58.902 50.000 0.00 0.00 38.11 2.10
3214 4991 3.707102 GGGTCAGTCCAAGTAGCTAAGAT 59.293 47.826 0.00 0.00 38.11 2.40
3215 4992 4.202172 GGGTCAGTCCAAGTAGCTAAGATC 60.202 50.000 0.00 0.00 38.11 2.75
3216 4993 4.647399 GGTCAGTCCAAGTAGCTAAGATCT 59.353 45.833 0.00 0.00 35.97 2.75
3217 4994 5.451242 GGTCAGTCCAAGTAGCTAAGATCTG 60.451 48.000 0.00 0.68 35.97 2.90
3218 4995 5.126384 GTCAGTCCAAGTAGCTAAGATCTGT 59.874 44.000 0.00 0.00 0.00 3.41
3219 4996 5.717178 TCAGTCCAAGTAGCTAAGATCTGTT 59.283 40.000 0.00 0.00 0.00 3.16
3220 4997 6.211584 TCAGTCCAAGTAGCTAAGATCTGTTT 59.788 38.462 0.00 0.00 0.00 2.83
3221 4998 6.876257 CAGTCCAAGTAGCTAAGATCTGTTTT 59.124 38.462 0.00 0.00 0.00 2.43
3222 4999 7.389053 CAGTCCAAGTAGCTAAGATCTGTTTTT 59.611 37.037 0.00 0.00 0.00 1.94
3239 5016 3.804786 TTTTTCTTTCCACGGGGTTTC 57.195 42.857 2.12 0.00 34.93 2.78
3240 5017 1.694844 TTTCTTTCCACGGGGTTTCC 58.305 50.000 2.12 0.00 34.93 3.13
3241 5018 0.551879 TTCTTTCCACGGGGTTTCCA 59.448 50.000 2.12 0.00 34.36 3.53
3242 5019 0.774908 TCTTTCCACGGGGTTTCCAT 59.225 50.000 2.12 0.00 34.36 3.41
3243 5020 1.146152 TCTTTCCACGGGGTTTCCATT 59.854 47.619 2.12 0.00 34.36 3.16
3244 5021 1.967779 CTTTCCACGGGGTTTCCATTT 59.032 47.619 2.12 0.00 34.36 2.32
3245 5022 2.089600 TTCCACGGGGTTTCCATTTT 57.910 45.000 2.12 0.00 34.36 1.82
3246 5023 2.089600 TCCACGGGGTTTCCATTTTT 57.910 45.000 2.12 0.00 34.36 1.94
3284 5061 9.822727 TTTATTCTTAACTGGATTCCTTTTCCT 57.177 29.630 3.95 0.00 34.17 3.36
3285 5062 9.822727 TTATTCTTAACTGGATTCCTTTTCCTT 57.177 29.630 3.95 0.00 34.17 3.36
3286 5063 8.727100 ATTCTTAACTGGATTCCTTTTCCTTT 57.273 30.769 3.95 0.00 34.17 3.11
3287 5064 8.547481 TTCTTAACTGGATTCCTTTTCCTTTT 57.453 30.769 3.95 0.00 34.17 2.27
3288 5065 9.649316 TTCTTAACTGGATTCCTTTTCCTTTTA 57.351 29.630 3.95 0.00 34.17 1.52
3289 5066 9.822727 TCTTAACTGGATTCCTTTTCCTTTTAT 57.177 29.630 3.95 0.00 34.17 1.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 2.608970 ATAGGGGCGTGCCATGTGTC 62.609 60.000 13.76 0.00 37.98 3.67
2 3 2.210144 AATAGGGGCGTGCCATGTGT 62.210 55.000 13.76 0.00 37.98 3.72
3 4 1.037030 AAATAGGGGCGTGCCATGTG 61.037 55.000 13.76 0.00 37.98 3.21
4 5 0.324275 AAAATAGGGGCGTGCCATGT 60.324 50.000 13.76 0.00 37.98 3.21
5 6 0.823460 AAAAATAGGGGCGTGCCATG 59.177 50.000 13.76 0.00 37.98 3.66
6 7 2.445682 TAAAAATAGGGGCGTGCCAT 57.554 45.000 13.76 3.07 37.98 4.40
7 8 2.445682 ATAAAAATAGGGGCGTGCCA 57.554 45.000 13.76 0.00 37.98 4.92
8 9 3.215975 TGTATAAAAATAGGGGCGTGCC 58.784 45.455 1.16 1.16 0.00 5.01
9 10 5.219633 CAATGTATAAAAATAGGGGCGTGC 58.780 41.667 0.00 0.00 0.00 5.34
10 11 5.533154 TCCAATGTATAAAAATAGGGGCGTG 59.467 40.000 0.00 0.00 0.00 5.34
11 12 5.697067 TCCAATGTATAAAAATAGGGGCGT 58.303 37.500 0.00 0.00 0.00 5.68
12 13 6.642707 TTCCAATGTATAAAAATAGGGGCG 57.357 37.500 0.00 0.00 0.00 6.13
13 14 7.787028 TGTTTCCAATGTATAAAAATAGGGGC 58.213 34.615 0.00 0.00 0.00 5.80
201 202 6.635755 TGAATCGTTCTTTTTCTGGGTTTTT 58.364 32.000 0.00 0.00 0.00 1.94
202 203 6.127451 ACTGAATCGTTCTTTTTCTGGGTTTT 60.127 34.615 0.00 0.00 0.00 2.43
203 204 5.359860 ACTGAATCGTTCTTTTTCTGGGTTT 59.640 36.000 0.00 0.00 0.00 3.27
204 205 4.887655 ACTGAATCGTTCTTTTTCTGGGTT 59.112 37.500 0.00 0.00 0.00 4.11
205 206 4.275936 CACTGAATCGTTCTTTTTCTGGGT 59.724 41.667 0.00 0.00 0.00 4.51
206 207 4.320494 CCACTGAATCGTTCTTTTTCTGGG 60.320 45.833 0.00 0.00 0.00 4.45
207 208 4.515191 TCCACTGAATCGTTCTTTTTCTGG 59.485 41.667 0.00 0.00 0.00 3.86
208 209 5.237344 AGTCCACTGAATCGTTCTTTTTCTG 59.763 40.000 0.00 0.00 0.00 3.02
209 210 5.368989 AGTCCACTGAATCGTTCTTTTTCT 58.631 37.500 0.00 0.00 0.00 2.52
210 211 5.334182 GGAGTCCACTGAATCGTTCTTTTTC 60.334 44.000 3.60 0.00 36.46 2.29
211 212 4.515567 GGAGTCCACTGAATCGTTCTTTTT 59.484 41.667 3.60 0.00 36.46 1.94
212 213 4.065789 GGAGTCCACTGAATCGTTCTTTT 58.934 43.478 3.60 0.00 36.46 2.27
213 214 3.557264 GGGAGTCCACTGAATCGTTCTTT 60.557 47.826 12.30 0.00 36.46 2.52
214 215 2.028020 GGGAGTCCACTGAATCGTTCTT 60.028 50.000 12.30 0.00 36.46 2.52
215 216 1.550976 GGGAGTCCACTGAATCGTTCT 59.449 52.381 12.30 0.00 36.46 3.01
216 217 1.736032 CGGGAGTCCACTGAATCGTTC 60.736 57.143 12.30 0.00 36.46 3.95
217 218 0.246635 CGGGAGTCCACTGAATCGTT 59.753 55.000 12.30 0.00 36.46 3.85
218 219 1.890894 CGGGAGTCCACTGAATCGT 59.109 57.895 12.30 0.00 36.46 3.73
219 220 1.519455 GCGGGAGTCCACTGAATCG 60.519 63.158 12.30 4.38 36.46 3.34
220 221 1.519455 CGCGGGAGTCCACTGAATC 60.519 63.158 12.30 0.00 34.88 2.52
221 222 2.579201 CGCGGGAGTCCACTGAAT 59.421 61.111 12.30 0.00 0.00 2.57
222 223 4.373116 GCGCGGGAGTCCACTGAA 62.373 66.667 12.30 0.00 0.00 3.02
241 242 3.797353 ATACTGGCCCGGCACAGG 61.797 66.667 23.73 9.67 39.00 4.00
242 243 2.514592 CATACTGGCCCGGCACAG 60.515 66.667 20.34 20.34 40.48 3.66
243 244 4.108299 CCATACTGGCCCGGCACA 62.108 66.667 12.58 6.08 0.00 4.57
252 253 2.202932 AAGCGAGCGCCATACTGG 60.203 61.111 11.66 0.00 43.17 4.00
253 254 1.485838 CTGAAGCGAGCGCCATACTG 61.486 60.000 11.66 1.80 43.17 2.74
254 255 1.227089 CTGAAGCGAGCGCCATACT 60.227 57.895 11.66 0.00 43.17 2.12
255 256 2.240500 CCTGAAGCGAGCGCCATAC 61.241 63.158 11.66 1.72 43.17 2.39
256 257 2.106938 CCTGAAGCGAGCGCCATA 59.893 61.111 11.66 0.00 43.17 2.74
257 258 4.087892 ACCTGAAGCGAGCGCCAT 62.088 61.111 11.66 0.44 43.17 4.40
259 260 4.742201 TCACCTGAAGCGAGCGCC 62.742 66.667 11.66 0.00 43.17 6.53
260 261 3.184683 CTCACCTGAAGCGAGCGC 61.185 66.667 6.78 6.78 42.33 5.92
261 262 3.184683 GCTCACCTGAAGCGAGCG 61.185 66.667 0.00 0.00 42.42 5.03
263 264 0.524392 CGTAGCTCACCTGAAGCGAG 60.524 60.000 0.00 0.00 0.00 5.03
264 265 0.958876 TCGTAGCTCACCTGAAGCGA 60.959 55.000 0.00 0.00 0.00 4.93
265 266 0.101399 ATCGTAGCTCACCTGAAGCG 59.899 55.000 0.00 0.00 0.00 4.68
266 267 1.846541 GATCGTAGCTCACCTGAAGC 58.153 55.000 0.00 0.00 0.00 3.86
267 268 1.671328 TCGATCGTAGCTCACCTGAAG 59.329 52.381 15.94 0.00 0.00 3.02
268 269 1.671328 CTCGATCGTAGCTCACCTGAA 59.329 52.381 15.94 0.00 0.00 3.02
269 270 1.300481 CTCGATCGTAGCTCACCTGA 58.700 55.000 15.94 0.00 0.00 3.86
270 271 0.317436 GCTCGATCGTAGCTCACCTG 60.317 60.000 23.48 4.23 37.01 4.00
271 272 2.026522 GCTCGATCGTAGCTCACCT 58.973 57.895 23.48 0.00 37.01 4.00
272 273 4.618513 GCTCGATCGTAGCTCACC 57.381 61.111 23.48 3.92 37.01 4.02
277 278 2.793353 CGCGAGCTCGATCGTAGC 60.793 66.667 38.74 23.39 44.53 3.58
278 279 1.437411 GACGCGAGCTCGATCGTAG 60.437 63.158 38.74 21.76 44.53 3.51
279 280 2.624811 GACGCGAGCTCGATCGTA 59.375 61.111 38.74 0.90 44.53 3.43
280 281 4.576842 CGACGCGAGCTCGATCGT 62.577 66.667 35.70 34.08 44.53 3.73
281 282 4.280935 TCGACGCGAGCTCGATCG 62.281 66.667 37.14 37.14 44.91 3.69
282 283 2.424479 CTCGACGCGAGCTCGATC 60.424 66.667 38.74 30.05 46.75 3.69
292 293 1.207085 CCTATACCTCGCTCGACGC 59.793 63.158 0.00 0.40 43.23 5.19
293 294 0.942962 AACCTATACCTCGCTCGACG 59.057 55.000 0.00 0.00 45.62 5.12
294 295 1.070041 CGAACCTATACCTCGCTCGAC 60.070 57.143 0.00 0.00 0.00 4.20
295 296 1.224075 CGAACCTATACCTCGCTCGA 58.776 55.000 0.00 0.00 0.00 4.04
296 297 3.749936 CGAACCTATACCTCGCTCG 57.250 57.895 0.00 0.00 0.00 5.03
300 301 0.966920 ATGGGCGAACCTATACCTCG 59.033 55.000 0.00 0.00 34.89 4.63
301 302 1.608283 GCATGGGCGAACCTATACCTC 60.608 57.143 0.00 0.00 34.28 3.85
302 303 0.396811 GCATGGGCGAACCTATACCT 59.603 55.000 0.00 0.00 34.28 3.08
303 304 0.605589 GGCATGGGCGAACCTATACC 60.606 60.000 0.00 0.00 42.47 2.73
304 305 2.928416 GGCATGGGCGAACCTATAC 58.072 57.895 0.00 0.00 42.47 1.47
314 315 0.958382 TTTGAGTGTACGGCATGGGC 60.958 55.000 0.00 0.00 40.13 5.36
315 316 1.529226 TTTTGAGTGTACGGCATGGG 58.471 50.000 0.00 0.00 0.00 4.00
316 317 3.848272 ATTTTTGAGTGTACGGCATGG 57.152 42.857 0.00 0.00 0.00 3.66
317 318 4.394920 AGGTATTTTTGAGTGTACGGCATG 59.605 41.667 0.00 0.00 0.00 4.06
318 319 4.585879 AGGTATTTTTGAGTGTACGGCAT 58.414 39.130 0.00 0.00 0.00 4.40
319 320 3.998341 GAGGTATTTTTGAGTGTACGGCA 59.002 43.478 0.00 0.00 0.00 5.69
320 321 4.251268 AGAGGTATTTTTGAGTGTACGGC 58.749 43.478 0.00 0.00 0.00 5.68
321 322 6.628185 AGTAGAGGTATTTTTGAGTGTACGG 58.372 40.000 0.00 0.00 0.00 4.02
322 323 7.431668 GCTAGTAGAGGTATTTTTGAGTGTACG 59.568 40.741 0.00 0.00 0.00 3.67
323 324 8.468399 AGCTAGTAGAGGTATTTTTGAGTGTAC 58.532 37.037 0.00 0.00 32.80 2.90
324 325 8.591114 AGCTAGTAGAGGTATTTTTGAGTGTA 57.409 34.615 0.00 0.00 32.80 2.90
325 326 7.483580 AGCTAGTAGAGGTATTTTTGAGTGT 57.516 36.000 0.00 0.00 32.80 3.55
326 327 8.688151 AGTAGCTAGTAGAGGTATTTTTGAGTG 58.312 37.037 0.00 0.00 40.22 3.51
327 328 8.688151 CAGTAGCTAGTAGAGGTATTTTTGAGT 58.312 37.037 0.00 0.00 40.22 3.41
328 329 8.904834 TCAGTAGCTAGTAGAGGTATTTTTGAG 58.095 37.037 0.00 0.00 40.22 3.02
329 330 8.818622 TCAGTAGCTAGTAGAGGTATTTTTGA 57.181 34.615 0.00 0.00 40.22 2.69
335 336 9.689501 GGAAATATCAGTAGCTAGTAGAGGTAT 57.310 37.037 0.00 0.00 40.22 2.73
336 337 8.108364 GGGAAATATCAGTAGCTAGTAGAGGTA 58.892 40.741 0.00 0.00 37.09 3.08
337 338 6.949463 GGGAAATATCAGTAGCTAGTAGAGGT 59.051 42.308 0.00 0.00 39.82 3.85
361 365 0.033796 ACACATGCTTGGATCCAGGG 60.034 55.000 24.05 17.13 0.00 4.45
370 374 2.256158 CGGCACCACACATGCTTG 59.744 61.111 0.00 0.00 42.93 4.01
372 376 2.669569 GTCGGCACCACACATGCT 60.670 61.111 0.00 0.00 42.93 3.79
390 394 3.896133 GTAGATCGGGCGTCGGCA 61.896 66.667 21.23 0.56 42.47 5.69
391 395 4.642542 GGTAGATCGGGCGTCGGC 62.643 72.222 10.88 10.88 39.77 5.54
392 396 4.323843 CGGTAGATCGGGCGTCGG 62.324 72.222 0.00 0.00 39.77 4.79
393 397 3.237946 CTCGGTAGATCGGGCGTCG 62.238 68.421 0.00 0.00 40.90 5.12
394 398 2.638154 CTCGGTAGATCGGGCGTC 59.362 66.667 0.00 0.00 0.00 5.19
395 399 3.593794 GCTCGGTAGATCGGGCGT 61.594 66.667 0.00 0.00 46.90 5.68
419 423 0.735632 GGTCAGAGAACTCAGCTGCG 60.736 60.000 9.47 5.22 0.00 5.18
423 427 1.216710 CGGGGTCAGAGAACTCAGC 59.783 63.158 4.64 0.00 0.00 4.26
429 433 3.379445 GCGTCCGGGGTCAGAGAA 61.379 66.667 0.00 0.00 0.00 2.87
434 438 3.000819 AGAATGCGTCCGGGGTCA 61.001 61.111 0.00 0.00 0.00 4.02
448 454 1.954146 GGTCAACGACGCAGCAGAA 60.954 57.895 0.00 0.00 32.65 3.02
454 460 0.389296 CTATGGTGGTCAACGACGCA 60.389 55.000 0.00 0.00 32.65 5.24
471 477 0.685097 GCTCCCGTATGATTGGGCTA 59.315 55.000 0.00 0.00 45.60 3.93
531 538 4.465512 GCGCAATGTGTCCGGCAG 62.466 66.667 0.30 0.00 0.00 4.85
592 604 4.363990 ACACTGAGACCTGCGGCG 62.364 66.667 0.51 0.51 0.00 6.46
601 613 1.527433 CGAGCTGGGTGACACTGAGA 61.527 60.000 5.39 0.00 0.00 3.27
602 614 1.080230 CGAGCTGGGTGACACTGAG 60.080 63.158 5.39 3.01 0.00 3.35
625 637 1.138883 TCCGCGTAGTGCTGTCATC 59.861 57.895 4.92 0.00 43.27 2.92
681 699 2.362120 ATGCTGTGCTGGGCCTTC 60.362 61.111 4.53 0.00 0.00 3.46
689 707 0.536687 AGTGCTTGTGATGCTGTGCT 60.537 50.000 0.00 0.00 0.00 4.40
690 708 0.386858 CAGTGCTTGTGATGCTGTGC 60.387 55.000 0.00 0.00 0.00 4.57
691 709 0.949397 ACAGTGCTTGTGATGCTGTG 59.051 50.000 0.00 0.00 38.99 3.66
692 710 2.224378 ACTACAGTGCTTGTGATGCTGT 60.224 45.455 4.92 0.00 41.10 4.40
693 711 2.159037 CACTACAGTGCTTGTGATGCTG 59.841 50.000 0.00 0.00 41.10 4.41
694 712 2.420642 CACTACAGTGCTTGTGATGCT 58.579 47.619 0.00 0.00 41.10 3.79
730 748 4.704833 ACGCGCCATGGTGAGCTT 62.705 61.111 29.49 14.85 0.00 3.74
737 755 2.176546 CAACTTCACGCGCCATGG 59.823 61.111 7.63 7.63 0.00 3.66
797 822 1.071071 TGCGAGGGGGATTTTATACGG 59.929 52.381 0.00 0.00 0.00 4.02
798 823 2.140717 GTGCGAGGGGGATTTTATACG 58.859 52.381 0.00 0.00 0.00 3.06
828 853 4.166011 GCGCGACAATGGTGCCTC 62.166 66.667 12.10 0.00 34.94 4.70
859 884 0.611200 ATACACCGCACTTGGCTACA 59.389 50.000 0.00 0.00 41.67 2.74
872 897 3.007635 GGCTTCCACACAAGTATACACC 58.992 50.000 5.50 0.00 0.00 4.16
897 922 1.067749 CATCTGGGCTCTCTCGCTG 59.932 63.158 0.00 0.00 0.00 5.18
901 926 0.829333 TCAAGCATCTGGGCTCTCTC 59.171 55.000 0.00 0.00 45.07 3.20
902 927 0.540923 GTCAAGCATCTGGGCTCTCT 59.459 55.000 0.00 0.00 45.07 3.10
903 928 0.809241 CGTCAAGCATCTGGGCTCTC 60.809 60.000 0.00 0.00 45.07 3.20
904 929 1.220206 CGTCAAGCATCTGGGCTCT 59.780 57.895 0.00 0.00 45.07 4.09
905 930 1.817099 CCGTCAAGCATCTGGGCTC 60.817 63.158 0.00 0.00 45.07 4.70
907 932 1.372087 CTTCCGTCAAGCATCTGGGC 61.372 60.000 0.00 0.00 0.00 5.36
908 933 0.250234 TCTTCCGTCAAGCATCTGGG 59.750 55.000 0.00 0.00 31.26 4.45
909 934 1.205655 TCTCTTCCGTCAAGCATCTGG 59.794 52.381 0.00 0.00 31.26 3.86
910 935 2.538437 CTCTCTTCCGTCAAGCATCTG 58.462 52.381 0.00 0.00 31.26 2.90
911 936 1.480137 CCTCTCTTCCGTCAAGCATCT 59.520 52.381 0.00 0.00 31.26 2.90
912 937 1.933247 CCTCTCTTCCGTCAAGCATC 58.067 55.000 0.00 0.00 31.26 3.91
913 938 0.107945 GCCTCTCTTCCGTCAAGCAT 60.108 55.000 0.00 0.00 31.26 3.79
914 939 1.293498 GCCTCTCTTCCGTCAAGCA 59.707 57.895 0.00 0.00 31.26 3.91
915 940 1.807573 CGCCTCTCTTCCGTCAAGC 60.808 63.158 0.00 0.00 31.26 4.01
916 941 1.153745 CCGCCTCTCTTCCGTCAAG 60.154 63.158 0.00 0.00 0.00 3.02
917 942 1.595993 CTCCGCCTCTCTTCCGTCAA 61.596 60.000 0.00 0.00 0.00 3.18
918 943 2.035155 TCCGCCTCTCTTCCGTCA 59.965 61.111 0.00 0.00 0.00 4.35
979 1039 1.296715 CCCTCTTCCCCACAACGAG 59.703 63.158 0.00 0.00 0.00 4.18
989 1049 1.144936 CACTCCATCGCCCTCTTCC 59.855 63.158 0.00 0.00 0.00 3.46
1130 1204 3.752747 TGATATTAAGGTCCATGCATGCG 59.247 43.478 21.69 14.24 0.00 4.73
1196 1302 8.811403 AGGATACATAAATGCATGCACGAAAGT 61.811 37.037 25.37 20.33 44.55 2.66
1197 1303 5.626543 GGATACATAAATGCATGCACGAAAG 59.373 40.000 25.37 15.54 0.00 2.62
1206 1312 7.560991 TCCAAGAACAAGGATACATAAATGCAT 59.439 33.333 0.00 0.00 41.41 3.96
1209 1315 7.864379 GCATCCAAGAACAAGGATACATAAATG 59.136 37.037 0.00 0.00 42.61 2.32
1217 1323 3.523157 TCCTGCATCCAAGAACAAGGATA 59.477 43.478 0.00 0.00 42.61 2.59
1235 1341 0.250295 TTCCAAGGACACGCTTCCTG 60.250 55.000 6.19 1.86 46.06 3.86
1275 1381 2.344203 CGCCTCCGGAGTCAGACTT 61.344 63.158 29.25 0.00 0.00 3.01
1335 1443 7.040340 ACAGAGATATACATCTACAAGAACGGG 60.040 40.741 0.00 0.00 41.78 5.28
1356 1464 6.927294 ATTTAATCCGCTTAAGGAACAGAG 57.073 37.500 4.29 0.00 44.50 3.35
1388 1497 4.321718 ACATTCGGCATCTATCATCAAGG 58.678 43.478 0.00 0.00 0.00 3.61
1421 1530 2.286654 GCCAGGTACGTACGTATGACTC 60.287 54.545 29.05 16.37 32.82 3.36
1429 1538 1.432251 CCAGAGCCAGGTACGTACG 59.568 63.158 18.98 15.01 0.00 3.67
1430 1539 1.141234 GCCAGAGCCAGGTACGTAC 59.859 63.158 17.56 17.56 0.00 3.67
1431 1540 1.000019 AGCCAGAGCCAGGTACGTA 60.000 57.895 0.00 0.00 41.25 3.57
1432 1541 2.283966 AGCCAGAGCCAGGTACGT 60.284 61.111 0.00 0.00 41.25 3.57
1509 1618 1.000163 GAGCCTCTGAACGACTGAACA 60.000 52.381 0.00 0.00 0.00 3.18
1537 1646 6.710295 ACAGAAATATGTTATGCCTTATGCGA 59.290 34.615 0.00 0.00 45.60 5.10
1545 1654 9.816354 AAATGGTTAACAGAAATATGTTATGCC 57.184 29.630 8.10 7.83 43.30 4.40
1553 1662 9.408648 CCCTAGTCAAATGGTTAACAGAAATAT 57.591 33.333 8.10 0.00 0.00 1.28
1554 1663 8.607713 TCCCTAGTCAAATGGTTAACAGAAATA 58.392 33.333 8.10 0.00 0.00 1.40
1556 1665 6.843752 TCCCTAGTCAAATGGTTAACAGAAA 58.156 36.000 8.10 0.00 0.00 2.52
1557 1666 6.442541 TCCCTAGTCAAATGGTTAACAGAA 57.557 37.500 8.10 0.00 0.00 3.02
1558 1667 5.045869 CCTCCCTAGTCAAATGGTTAACAGA 60.046 44.000 8.10 0.00 0.00 3.41
1559 1668 5.186198 CCTCCCTAGTCAAATGGTTAACAG 58.814 45.833 8.10 0.00 0.00 3.16
1560 1669 4.018779 CCCTCCCTAGTCAAATGGTTAACA 60.019 45.833 8.10 0.00 0.00 2.41
1561 1670 4.226620 TCCCTCCCTAGTCAAATGGTTAAC 59.773 45.833 0.00 0.00 0.00 2.01
1586 1790 0.241213 TCTCAGTGTGAGTGCGCTAC 59.759 55.000 9.73 5.32 44.58 3.58
1726 1930 1.002366 CTTCGTGAATGCTCTTCCGG 58.998 55.000 0.00 0.00 0.00 5.14
1783 1991 2.471607 CGTGCGTGCATGTGACTC 59.528 61.111 7.93 0.00 0.00 3.36
1855 2063 2.560981 CAAATGGTTTGTGGGGAGTACC 59.439 50.000 0.00 0.00 35.94 3.34
1856 2064 2.029380 GCAAATGGTTTGTGGGGAGTAC 60.029 50.000 4.56 0.00 42.56 2.73
1857 2065 2.158385 AGCAAATGGTTTGTGGGGAGTA 60.158 45.455 4.56 0.00 42.56 2.59
1858 2066 1.047801 GCAAATGGTTTGTGGGGAGT 58.952 50.000 4.56 0.00 42.56 3.85
1859 2067 1.001181 CAGCAAATGGTTTGTGGGGAG 59.999 52.381 4.56 0.00 42.56 4.30
1860 2068 1.047002 CAGCAAATGGTTTGTGGGGA 58.953 50.000 4.56 0.00 42.56 4.81
1861 2069 0.758123 ACAGCAAATGGTTTGTGGGG 59.242 50.000 4.56 0.00 42.56 4.96
1864 2072 9.109393 AGTATATAGTACAGCAAATGGTTTGTG 57.891 33.333 0.00 4.57 42.56 3.33
1865 2073 9.681062 AAGTATATAGTACAGCAAATGGTTTGT 57.319 29.630 0.00 0.00 42.56 2.83
1866 2074 9.935682 CAAGTATATAGTACAGCAAATGGTTTG 57.064 33.333 0.00 0.00 43.44 2.93
1867 2075 9.681062 ACAAGTATATAGTACAGCAAATGGTTT 57.319 29.630 0.00 0.00 0.00 3.27
1875 2083 9.458727 GGGAGTATACAAGTATATAGTACAGCA 57.541 37.037 5.50 0.00 31.45 4.41
1876 2084 9.683870 AGGGAGTATACAAGTATATAGTACAGC 57.316 37.037 5.50 0.00 31.45 4.40
1879 2087 9.323985 CGGAGGGAGTATACAAGTATATAGTAC 57.676 40.741 5.50 0.00 31.45 2.73
1880 2088 9.051259 ACGGAGGGAGTATACAAGTATATAGTA 57.949 37.037 5.50 0.00 31.45 1.82
1881 2089 7.926705 ACGGAGGGAGTATACAAGTATATAGT 58.073 38.462 5.50 0.00 31.45 2.12
1882 2090 8.804912 AACGGAGGGAGTATACAAGTATATAG 57.195 38.462 5.50 0.00 31.45 1.31
1883 2091 9.236006 GAAACGGAGGGAGTATACAAGTATATA 57.764 37.037 5.50 0.00 31.45 0.86
1884 2092 7.949006 AGAAACGGAGGGAGTATACAAGTATAT 59.051 37.037 5.50 0.00 31.45 0.86
1885 2093 7.293073 AGAAACGGAGGGAGTATACAAGTATA 58.707 38.462 5.50 0.00 0.00 1.47
1886 2094 6.134754 AGAAACGGAGGGAGTATACAAGTAT 58.865 40.000 5.50 0.00 0.00 2.12
1887 2095 5.513233 AGAAACGGAGGGAGTATACAAGTA 58.487 41.667 5.50 0.00 0.00 2.24
1888 2096 4.351127 AGAAACGGAGGGAGTATACAAGT 58.649 43.478 5.50 0.00 0.00 3.16
1889 2097 6.461110 TTAGAAACGGAGGGAGTATACAAG 57.539 41.667 5.50 0.00 0.00 3.16
1890 2098 6.855763 TTTAGAAACGGAGGGAGTATACAA 57.144 37.500 5.50 0.00 0.00 2.41
1891 2099 7.781693 AGTATTTAGAAACGGAGGGAGTATACA 59.218 37.037 5.50 0.00 0.00 2.29
1892 2100 8.175925 AGTATTTAGAAACGGAGGGAGTATAC 57.824 38.462 0.00 0.00 0.00 1.47
1893 2101 8.636213 CAAGTATTTAGAAACGGAGGGAGTATA 58.364 37.037 0.00 0.00 0.00 1.47
1894 2102 7.125356 ACAAGTATTTAGAAACGGAGGGAGTAT 59.875 37.037 0.00 0.00 0.00 2.12
1895 2103 6.438425 ACAAGTATTTAGAAACGGAGGGAGTA 59.562 38.462 0.00 0.00 0.00 2.59
1896 2104 5.247792 ACAAGTATTTAGAAACGGAGGGAGT 59.752 40.000 0.00 0.00 0.00 3.85
1897 2105 5.731591 ACAAGTATTTAGAAACGGAGGGAG 58.268 41.667 0.00 0.00 0.00 4.30
1898 2106 5.482878 AGACAAGTATTTAGAAACGGAGGGA 59.517 40.000 0.00 0.00 0.00 4.20
1899 2107 5.731591 AGACAAGTATTTAGAAACGGAGGG 58.268 41.667 0.00 0.00 0.00 4.30
1900 2108 7.603024 AGAAAGACAAGTATTTAGAAACGGAGG 59.397 37.037 0.00 0.00 0.00 4.30
1901 2109 8.535690 AGAAAGACAAGTATTTAGAAACGGAG 57.464 34.615 0.00 0.00 0.00 4.63
1902 2110 9.635520 CTAGAAAGACAAGTATTTAGAAACGGA 57.364 33.333 0.00 0.00 0.00 4.69
1903 2111 9.420551 ACTAGAAAGACAAGTATTTAGAAACGG 57.579 33.333 0.00 0.00 0.00 4.44
1913 2121 9.778741 TGTTGAAATGACTAGAAAGACAAGTAT 57.221 29.630 0.00 0.00 31.23 2.12
1914 2122 9.607988 TTGTTGAAATGACTAGAAAGACAAGTA 57.392 29.630 0.00 0.00 31.23 2.24
1915 2123 8.506168 TTGTTGAAATGACTAGAAAGACAAGT 57.494 30.769 0.00 0.00 31.23 3.16
1916 2124 9.956720 ATTTGTTGAAATGACTAGAAAGACAAG 57.043 29.630 0.00 0.00 31.23 3.16
1951 2159 9.436957 AGTGTAGATTCACTCATTTTATTTCGT 57.563 29.630 0.00 0.00 44.07 3.85
1993 2201 9.074576 TCAAATGACTACTACATACGGATGTAT 57.925 33.333 20.64 13.02 45.42 2.29
1994 2202 8.454570 TCAAATGACTACTACATACGGATGTA 57.545 34.615 19.32 19.32 44.77 2.29
1996 2204 8.642908 TTTCAAATGACTACTACATACGGATG 57.357 34.615 5.94 5.94 39.16 3.51
1997 2205 9.261180 CATTTCAAATGACTACTACATACGGAT 57.739 33.333 3.82 0.00 0.00 4.18
1998 2206 8.255206 ACATTTCAAATGACTACTACATACGGA 58.745 33.333 17.30 0.00 0.00 4.69
1999 2207 8.420374 ACATTTCAAATGACTACTACATACGG 57.580 34.615 17.30 0.00 0.00 4.02
2000 2208 9.302345 AGACATTTCAAATGACTACTACATACG 57.698 33.333 17.30 0.00 0.00 3.06
2027 2235 9.338622 CCTCCGTTCCTAAATATTTGTCTTTAT 57.661 33.333 11.05 0.00 0.00 1.40
2028 2236 7.771826 CCCTCCGTTCCTAAATATTTGTCTTTA 59.228 37.037 11.05 0.00 0.00 1.85
2029 2237 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2030 2238 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2031 2239 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2032 2240 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
2033 2241 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2034 2242 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2035 2243 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2036 2244 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
2037 2245 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2038 2246 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2039 2247 3.991683 ACTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2040 2248 3.463048 ACTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2041 2249 3.094572 CAACTACTCCCTCCGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
2042 2250 2.042162 ACAACTACTCCCTCCGTTCCTA 59.958 50.000 0.00 0.00 0.00 2.94
2043 2251 1.203149 ACAACTACTCCCTCCGTTCCT 60.203 52.381 0.00 0.00 0.00 3.36
2044 2252 1.264295 ACAACTACTCCCTCCGTTCC 58.736 55.000 0.00 0.00 0.00 3.62
2045 2253 4.430908 CAATACAACTACTCCCTCCGTTC 58.569 47.826 0.00 0.00 0.00 3.95
2046 2254 3.369157 GCAATACAACTACTCCCTCCGTT 60.369 47.826 0.00 0.00 0.00 4.44
2047 2255 2.167900 GCAATACAACTACTCCCTCCGT 59.832 50.000 0.00 0.00 0.00 4.69
2048 2256 2.167693 TGCAATACAACTACTCCCTCCG 59.832 50.000 0.00 0.00 0.00 4.63
2049 2257 3.532542 GTGCAATACAACTACTCCCTCC 58.467 50.000 0.00 0.00 0.00 4.30
2050 2258 3.532542 GGTGCAATACAACTACTCCCTC 58.467 50.000 0.00 0.00 31.12 4.30
2051 2259 2.238898 GGGTGCAATACAACTACTCCCT 59.761 50.000 0.00 0.00 35.72 4.20
2052 2260 2.026636 TGGGTGCAATACAACTACTCCC 60.027 50.000 0.00 0.00 35.72 4.30
2053 2261 3.007635 GTGGGTGCAATACAACTACTCC 58.992 50.000 0.00 0.00 43.75 3.85
2054 2262 3.007635 GGTGGGTGCAATACAACTACTC 58.992 50.000 0.00 0.00 46.20 2.59
2055 2263 2.290705 GGGTGGGTGCAATACAACTACT 60.291 50.000 0.00 0.00 46.20 2.57
2129 2338 3.240606 CTTGCAGGCGAACACCACG 62.241 63.158 0.00 0.00 0.00 4.94
2161 2372 7.392418 AGCTGAATATACATACAGATGCATGT 58.608 34.615 2.46 0.00 38.81 3.21
2171 2382 8.331022 CACACACTTCAAGCTGAATATACATAC 58.669 37.037 0.00 0.00 35.59 2.39
2203 2417 0.741915 TGAACAACAAAAGCCGGGTC 59.258 50.000 6.62 0.00 0.00 4.46
2206 2420 3.564511 CTGTATGAACAACAAAAGCCGG 58.435 45.455 0.00 0.00 34.49 6.13
2252 2469 2.883253 GACGCTTCGCTCCTCAGC 60.883 66.667 0.00 0.00 42.96 4.26
2383 2600 0.178970 TCCCTATACACGGAGGCTCC 60.179 60.000 24.06 24.06 0.00 4.70
2386 2603 1.926108 ATCTCCCTATACACGGAGGC 58.074 55.000 3.39 0.00 44.99 4.70
2419 2636 6.042781 ACAGTGCTATCTAGACTAGACTAGCT 59.957 42.308 29.63 15.08 39.67 3.32
2420 2637 6.228258 ACAGTGCTATCTAGACTAGACTAGC 58.772 44.000 26.83 26.83 39.56 3.42
2421 2638 7.172532 CCAACAGTGCTATCTAGACTAGACTAG 59.827 44.444 19.43 19.43 40.59 2.57
2482 2726 1.003349 TCCGTCCTTTCTCTCGAGAGT 59.997 52.381 35.11 0.00 42.60 3.24
2488 2732 0.827368 ATGGCTCCGTCCTTTCTCTC 59.173 55.000 0.00 0.00 0.00 3.20
2493 2737 3.763057 AGTTAAAATGGCTCCGTCCTTT 58.237 40.909 0.00 0.00 0.00 3.11
2499 2743 4.138487 AGGAGTAGTTAAAATGGCTCCG 57.862 45.455 0.00 0.00 45.06 4.63
2500 2744 7.964624 ACTATAGGAGTAGTTAAAATGGCTCC 58.035 38.462 4.43 0.00 41.90 4.70
2509 2753 9.730705 ACACGCATATACTATAGGAGTAGTTAA 57.269 33.333 4.43 0.00 43.99 2.01
2518 2762 4.399618 AGAGGCACACGCATATACTATAGG 59.600 45.833 4.43 0.00 41.24 2.57
2519 2763 5.568685 AGAGGCACACGCATATACTATAG 57.431 43.478 0.00 0.00 41.24 1.31
2524 2811 3.254060 CCATAGAGGCACACGCATATAC 58.746 50.000 0.00 0.00 41.24 1.47
2545 2832 6.691508 AGAAAAGAAAAACATGGGCATAGAC 58.308 36.000 0.00 0.00 0.00 2.59
2548 2835 8.744568 AAAAAGAAAAGAAAAACATGGGCATA 57.255 26.923 0.00 0.00 0.00 3.14
2549 2836 7.557358 AGAAAAAGAAAAGAAAAACATGGGCAT 59.443 29.630 0.00 0.00 0.00 4.40
2550 2837 6.883756 AGAAAAAGAAAAGAAAAACATGGGCA 59.116 30.769 0.00 0.00 0.00 5.36
2551 2838 7.065683 TCAGAAAAAGAAAAGAAAAACATGGGC 59.934 33.333 0.00 0.00 0.00 5.36
2552 2839 8.491331 TCAGAAAAAGAAAAGAAAAACATGGG 57.509 30.769 0.00 0.00 0.00 4.00
2563 2850 7.543520 GGCCATACTCAATCAGAAAAAGAAAAG 59.456 37.037 0.00 0.00 0.00 2.27
2567 2854 5.415701 GTGGCCATACTCAATCAGAAAAAGA 59.584 40.000 9.72 0.00 0.00 2.52
2568 2855 5.644644 GTGGCCATACTCAATCAGAAAAAG 58.355 41.667 9.72 0.00 0.00 2.27
2571 2858 3.270027 CGTGGCCATACTCAATCAGAAA 58.730 45.455 9.72 0.00 0.00 2.52
2574 2861 1.935873 CACGTGGCCATACTCAATCAG 59.064 52.381 9.72 0.00 0.00 2.90
2579 2866 0.037697 GACACACGTGGCCATACTCA 60.038 55.000 21.57 0.00 30.68 3.41
2591 2878 2.032054 AGTGCAAATTGACAGACACACG 59.968 45.455 0.00 0.00 32.22 4.49
2598 4268 3.313249 TGTCACTGAGTGCAAATTGACAG 59.687 43.478 7.93 3.14 32.98 3.51
2609 4279 3.555547 TGTTCATTTCGTGTCACTGAGTG 59.444 43.478 6.18 6.18 34.45 3.51
2615 4285 2.223377 GGTCCTGTTCATTTCGTGTCAC 59.777 50.000 0.00 0.00 0.00 3.67
2622 4292 0.721718 CGCTCGGTCCTGTTCATTTC 59.278 55.000 0.00 0.00 0.00 2.17
2632 4302 3.682292 AATTCTGCCCGCTCGGTCC 62.682 63.158 7.59 0.00 0.00 4.46
2644 4314 6.385033 CCAAAGAAGCAAAGGTAGAATTCTG 58.615 40.000 18.47 1.97 0.00 3.02
2667 4337 2.433239 TCCCGAACTGAAATAGGTAGCC 59.567 50.000 0.00 0.00 0.00 3.93
2672 4342 4.101741 AGGATTCTCCCGAACTGAAATAGG 59.898 45.833 0.00 0.00 37.19 2.57
2679 4349 2.366916 AGCATAGGATTCTCCCGAACTG 59.633 50.000 0.00 0.00 37.19 3.16
2682 4352 1.971357 GGAGCATAGGATTCTCCCGAA 59.029 52.381 0.00 0.00 40.29 4.30
2684 4354 1.548269 GAGGAGCATAGGATTCTCCCG 59.452 57.143 4.08 0.00 45.73 5.14
2685 4355 2.614259 TGAGGAGCATAGGATTCTCCC 58.386 52.381 0.00 0.00 45.73 4.30
2686 4356 4.906747 ATTGAGGAGCATAGGATTCTCC 57.093 45.455 0.00 0.00 45.11 3.71
2687 4357 6.210385 TCACTATTGAGGAGCATAGGATTCTC 59.790 42.308 0.00 0.00 0.00 2.87
2688 4358 6.014669 GTCACTATTGAGGAGCATAGGATTCT 60.015 42.308 0.00 0.00 30.10 2.40
2689 4359 6.162777 GTCACTATTGAGGAGCATAGGATTC 58.837 44.000 0.00 0.00 30.10 2.52
2690 4360 5.604231 TGTCACTATTGAGGAGCATAGGATT 59.396 40.000 0.00 0.00 30.10 3.01
2691 4361 5.011533 GTGTCACTATTGAGGAGCATAGGAT 59.988 44.000 0.00 0.00 30.10 3.24
2692 4362 4.342378 GTGTCACTATTGAGGAGCATAGGA 59.658 45.833 0.00 0.00 30.10 2.94
2693 4363 4.100035 TGTGTCACTATTGAGGAGCATAGG 59.900 45.833 4.27 0.00 30.10 2.57
2720 4390 8.081633 TGCAAATTCAGTCAACTTACAAATAGG 58.918 33.333 0.00 0.00 0.00 2.57
2725 4395 7.224362 CCAAATGCAAATTCAGTCAACTTACAA 59.776 33.333 0.00 0.00 0.00 2.41
2745 4415 9.754382 CTCCCATAAAATCAACTTATCCAAATG 57.246 33.333 0.00 0.00 0.00 2.32
2752 4422 8.893563 TTTCACCTCCCATAAAATCAACTTAT 57.106 30.769 0.00 0.00 0.00 1.73
2773 4443 3.648067 TCTTCTTCCTTCAGCTCCTTTCA 59.352 43.478 0.00 0.00 0.00 2.69
2803 4488 2.742856 CGGCTGCATGAGAAATGGAGTA 60.743 50.000 0.50 0.00 39.30 2.59
2805 4490 0.661552 CGGCTGCATGAGAAATGGAG 59.338 55.000 0.50 2.80 39.95 3.86
2806 4491 0.252761 TCGGCTGCATGAGAAATGGA 59.747 50.000 0.50 0.00 0.00 3.41
2874 4636 6.101650 TGAACTGTTGATCACTATCACAGT 57.898 37.500 19.71 19.71 45.73 3.55
2879 4643 6.128172 CCCTTGTTGAACTGTTGATCACTATC 60.128 42.308 0.00 0.00 0.00 2.08
2882 4646 3.885297 CCCTTGTTGAACTGTTGATCACT 59.115 43.478 0.00 0.00 0.00 3.41
2883 4647 3.550842 GCCCTTGTTGAACTGTTGATCAC 60.551 47.826 0.00 0.00 0.00 3.06
2885 4649 2.887152 AGCCCTTGTTGAACTGTTGATC 59.113 45.455 0.00 0.00 0.00 2.92
3016 4785 4.141665 CCATATCAAACCGTACACCCCTTA 60.142 45.833 0.00 0.00 0.00 2.69
3021 4790 3.547054 TCCCATATCAAACCGTACACC 57.453 47.619 0.00 0.00 0.00 4.16
3022 4791 4.255301 TGTTCCCATATCAAACCGTACAC 58.745 43.478 0.00 0.00 0.00 2.90
3030 4802 3.197983 ACCCCTCTGTTCCCATATCAAA 58.802 45.455 0.00 0.00 0.00 2.69
3042 4814 0.033796 TAATCGTCCGACCCCTCTGT 60.034 55.000 0.00 0.00 0.00 3.41
3050 4822 7.689953 TTTATTTAGCTTCTAATCGTCCGAC 57.310 36.000 0.00 0.00 0.00 4.79
3071 4843 0.249868 CCCGCAGCGATCCAGATTTA 60.250 55.000 18.75 0.00 0.00 1.40
3072 4844 1.524621 CCCGCAGCGATCCAGATTT 60.525 57.895 18.75 0.00 0.00 2.17
3087 4859 0.177141 TATCTCCAAAGGAACGCCCG 59.823 55.000 0.00 0.00 40.87 6.13
3088 4860 2.289565 CTTATCTCCAAAGGAACGCCC 58.710 52.381 0.00 0.00 33.31 6.13
3090 4862 2.352960 CTGCTTATCTCCAAAGGAACGC 59.647 50.000 0.00 0.00 0.00 4.84
3091 4863 3.861840 TCTGCTTATCTCCAAAGGAACG 58.138 45.455 0.00 0.00 0.00 3.95
3092 4864 4.633565 CACTCTGCTTATCTCCAAAGGAAC 59.366 45.833 0.00 0.00 0.00 3.62
3093 4865 4.532126 TCACTCTGCTTATCTCCAAAGGAA 59.468 41.667 0.00 0.00 0.00 3.36
3095 4867 4.478206 TCACTCTGCTTATCTCCAAAGG 57.522 45.455 0.00 0.00 0.00 3.11
3097 4869 6.051717 GCTTATCACTCTGCTTATCTCCAAA 58.948 40.000 0.00 0.00 0.00 3.28
3114 4891 4.101585 AGGATTTCTCGTCCATGCTTATCA 59.898 41.667 0.00 0.00 38.25 2.15
3115 4892 4.636249 AGGATTTCTCGTCCATGCTTATC 58.364 43.478 0.00 0.00 38.25 1.75
3129 4906 7.309867 CCACAGTTAGCGGTATATAGGATTTCT 60.310 40.741 0.00 0.00 0.00 2.52
3130 4907 6.812160 CCACAGTTAGCGGTATATAGGATTTC 59.188 42.308 0.00 0.00 0.00 2.17
3131 4908 6.698380 CCACAGTTAGCGGTATATAGGATTT 58.302 40.000 0.00 0.00 0.00 2.17
3132 4909 5.337330 GCCACAGTTAGCGGTATATAGGATT 60.337 44.000 0.00 0.00 0.00 3.01
3133 4910 4.159879 GCCACAGTTAGCGGTATATAGGAT 59.840 45.833 0.00 0.00 0.00 3.24
3134 4911 3.508793 GCCACAGTTAGCGGTATATAGGA 59.491 47.826 0.00 0.00 0.00 2.94
3135 4912 3.257375 TGCCACAGTTAGCGGTATATAGG 59.743 47.826 0.00 0.00 0.00 2.57
3136 4913 4.514781 TGCCACAGTTAGCGGTATATAG 57.485 45.455 0.00 0.00 0.00 1.31
3137 4914 4.940905 TTGCCACAGTTAGCGGTATATA 57.059 40.909 0.00 0.00 0.00 0.86
3138 4915 3.830744 TTGCCACAGTTAGCGGTATAT 57.169 42.857 0.00 0.00 0.00 0.86
3139 4916 3.613494 TTTGCCACAGTTAGCGGTATA 57.387 42.857 0.00 0.00 0.00 1.47
3140 4917 2.483014 TTTGCCACAGTTAGCGGTAT 57.517 45.000 0.00 0.00 0.00 2.73
3141 4918 2.483014 ATTTGCCACAGTTAGCGGTA 57.517 45.000 0.00 0.00 0.00 4.02
3142 4919 1.269448 CAATTTGCCACAGTTAGCGGT 59.731 47.619 0.00 0.00 0.00 5.68
3143 4920 1.981254 CAATTTGCCACAGTTAGCGG 58.019 50.000 0.00 0.00 0.00 5.52
3144 4921 1.339711 GCAATTTGCCACAGTTAGCG 58.660 50.000 10.34 0.00 37.42 4.26
3155 4932 2.182537 CTCGCAGGGGCAATTTGC 59.817 61.111 13.04 13.04 44.08 3.68
3156 4933 2.182537 GCTCGCAGGGGCAATTTG 59.817 61.111 0.00 0.00 41.24 2.32
3157 4934 2.283101 TGCTCGCAGGGGCAATTT 60.283 55.556 0.00 0.00 41.24 1.82
3158 4935 2.753043 CTGCTCGCAGGGGCAATT 60.753 61.111 10.98 0.00 41.24 2.32
3166 4943 3.417224 TTTGCTCGCTGCTCGCAG 61.417 61.111 14.30 14.30 46.15 5.18
3167 4944 3.716006 GTTTGCTCGCTGCTCGCA 61.716 61.111 8.34 8.34 43.37 5.10
3168 4945 4.451652 GGTTTGCTCGCTGCTCGC 62.452 66.667 0.00 0.24 43.37 5.03
3169 4946 4.139420 CGGTTTGCTCGCTGCTCG 62.139 66.667 0.00 0.00 43.37 5.03
3170 4947 3.793144 CCGGTTTGCTCGCTGCTC 61.793 66.667 0.00 0.00 43.37 4.26
3173 4950 3.976701 ATCCCCGGTTTGCTCGCTG 62.977 63.158 0.00 0.00 0.00 5.18
3174 4951 3.717294 ATCCCCGGTTTGCTCGCT 61.717 61.111 0.00 0.00 0.00 4.93
3175 4952 3.508840 CATCCCCGGTTTGCTCGC 61.509 66.667 0.00 0.00 0.00 5.03
3176 4953 2.824041 CCATCCCCGGTTTGCTCG 60.824 66.667 0.00 0.00 0.00 5.03
3177 4954 2.440247 CCCATCCCCGGTTTGCTC 60.440 66.667 0.00 0.00 0.00 4.26
3178 4955 3.264845 ACCCATCCCCGGTTTGCT 61.265 61.111 0.00 0.00 0.00 3.91
3179 4956 2.754254 GACCCATCCCCGGTTTGC 60.754 66.667 0.00 0.00 32.27 3.68
3180 4957 1.378514 CTGACCCATCCCCGGTTTG 60.379 63.158 0.00 0.00 32.27 2.93
3181 4958 1.848886 GACTGACCCATCCCCGGTTT 61.849 60.000 0.00 0.00 32.27 3.27
3182 4959 2.204090 ACTGACCCATCCCCGGTT 60.204 61.111 0.00 0.00 32.27 4.44
3183 4960 2.687566 GACTGACCCATCCCCGGT 60.688 66.667 0.00 0.00 35.88 5.28
3184 4961 3.480133 GGACTGACCCATCCCCGG 61.480 72.222 0.00 0.00 0.00 5.73
3185 4962 2.257409 CTTGGACTGACCCATCCCCG 62.257 65.000 0.00 0.00 35.87 5.73
3186 4963 1.208165 ACTTGGACTGACCCATCCCC 61.208 60.000 0.00 0.00 35.87 4.81
3187 4964 1.486726 CTACTTGGACTGACCCATCCC 59.513 57.143 0.00 0.00 35.87 3.85
3188 4965 1.134371 GCTACTTGGACTGACCCATCC 60.134 57.143 0.00 0.00 35.87 3.51
3189 4966 1.834263 AGCTACTTGGACTGACCCATC 59.166 52.381 0.00 0.00 35.87 3.51
3190 4967 1.958288 AGCTACTTGGACTGACCCAT 58.042 50.000 0.00 0.00 35.87 4.00
3191 4968 2.615986 TAGCTACTTGGACTGACCCA 57.384 50.000 0.00 0.00 38.00 4.51
3192 4969 3.097614 TCTTAGCTACTTGGACTGACCC 58.902 50.000 0.00 0.00 38.00 4.46
3193 4970 4.647399 AGATCTTAGCTACTTGGACTGACC 59.353 45.833 0.00 0.00 39.54 4.02
3194 4971 5.126384 ACAGATCTTAGCTACTTGGACTGAC 59.874 44.000 14.38 0.00 0.00 3.51
3195 4972 5.265191 ACAGATCTTAGCTACTTGGACTGA 58.735 41.667 14.38 0.00 0.00 3.41
3196 4973 5.590530 ACAGATCTTAGCTACTTGGACTG 57.409 43.478 0.00 1.97 0.00 3.51
3197 4974 6.613153 AAACAGATCTTAGCTACTTGGACT 57.387 37.500 0.00 0.00 0.00 3.85
3198 4975 7.674471 AAAAACAGATCTTAGCTACTTGGAC 57.326 36.000 0.00 0.00 0.00 4.02
3219 4996 2.431419 GGAAACCCCGTGGAAAGAAAAA 59.569 45.455 0.00 0.00 34.81 1.94
3220 4997 2.033372 GGAAACCCCGTGGAAAGAAAA 58.967 47.619 0.00 0.00 34.81 2.29
3221 4998 1.063867 TGGAAACCCCGTGGAAAGAAA 60.064 47.619 0.00 0.00 37.93 2.52
3222 4999 0.551879 TGGAAACCCCGTGGAAAGAA 59.448 50.000 0.00 0.00 37.93 2.52
3223 5000 0.774908 ATGGAAACCCCGTGGAAAGA 59.225 50.000 0.00 0.00 37.93 2.52
3224 5001 1.627864 AATGGAAACCCCGTGGAAAG 58.372 50.000 0.00 0.00 37.93 2.62
3225 5002 2.089600 AAATGGAAACCCCGTGGAAA 57.910 45.000 0.00 0.00 37.93 3.13
3226 5003 2.089600 AAAATGGAAACCCCGTGGAA 57.910 45.000 0.00 0.00 37.93 3.53
3227 5004 2.089600 AAAAATGGAAACCCCGTGGA 57.910 45.000 0.00 0.00 37.93 4.02
3258 5035 9.822727 AGGAAAAGGAATCCAGTTAAGAATAAA 57.177 29.630 0.61 0.00 39.55 1.40
3259 5036 9.822727 AAGGAAAAGGAATCCAGTTAAGAATAA 57.177 29.630 0.61 0.00 39.55 1.40
3260 5037 9.822727 AAAGGAAAAGGAATCCAGTTAAGAATA 57.177 29.630 0.61 0.00 39.55 1.75
3261 5038 8.727100 AAAGGAAAAGGAATCCAGTTAAGAAT 57.273 30.769 0.61 0.00 39.55 2.40
3262 5039 8.547481 AAAAGGAAAAGGAATCCAGTTAAGAA 57.453 30.769 0.61 0.00 39.55 2.52
3263 5040 9.822727 ATAAAAGGAAAAGGAATCCAGTTAAGA 57.177 29.630 0.61 0.00 39.55 2.10


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.