>input_sequence_53316
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---------------------------------ATGGAGTGCAGGAAGATGAAGCCCGTCCTTGCTCTCGTGCTGCTGCT
GTCGTGCCATCTTCTTCTTCCGCTGGTCTCCTCCGTGCCCGTGTCGAGTAAGTGTTTGACCCCCAACCCCATGCATTCAT
GCACGC-------------------------ATGCATGGACCTTAATATCAGTTCATCTTCTTTCTTGGCATGTGT----
---CTGTGCATGCATGTTACTACTTTCGTGCATGCATTTATGTATCCTTGTTCTTGGATGCAGGAAGCGTGTCCTTGGAA
AATCATCAAGCCTCAGCTTCAAGTCTGACTCCGGAGGCGGTGCCTGTTCAGGTCAATCTCT--CCCTCTACCTGATGCCT
TTCCCGTTCTTGTAGATGTATATCTCTGTTCC-TTAAGCGGATTAAATTAGTTGTGCCTTGATGATAGATGCCGAATGTT
ACTTGTACAGAGTCATACGTACGTACCTGGCTCTGGCTGCTTCCTGCTTGCCAGTGGCCGGAGCCGTCACCATGGATGGC
TTGCCTGTTCCCTTGTCTGTTCAGTCGTTCAGAGGCTCGAAGCTATCGCATAAGGCATAACATATTTCTG----------
--------------------------------------------------------------------------------
-----TTAACCATTTGACTAGGGAGGGAGGTAGCGCACTCACACTGAGAGTTTAAGTCAAGTGCTCTCTGTAGCTGGTGT
CCACCATAGAGCACTCATCAGTCAGCCACTCACTGACGCGGCACCCACAGTTTGACAAAATCACAAAATCGCATGTGACC
TTTGGACGCCCGGAAGAGCATTCACGAAGCTGTGTCGGCCGGTTGCCAG----TGCACTGATCCCATGTCGAGTCACATG
CACGCACGGCTAGATAAGCCGGGCCGGCCGGCCGCAGTGCAGCCCACATGCGTGGCCACTCCGGTACTCCCCACAAACCA
TTTGCTGTACTATATACTTGTATACTCCCTCCGTTTCTAAATACTTGTCTTTCTAGTCATTTCAACAAATAACTACATAC
GAAATAAAATGAGTGAATCTACACTCTAAAATATATCTACATACATCCGTATGTAGTAGTCATTTGAAATGTCTATAAAG
ACAAATATTTAGGAACGGAGGGAGTAGTTGTATTGCACCCACCCACACCATCGAAAGGTCCACCTCGCTCGTGC-AACAA
GAACATTCCCGGTGCGGC--GTGGTGTTCGCCTGCAAGTTGCAAACTGAGTACATGCATCTG---TATGTATATTCAGCT
TGAAGTGTGTGACACTGACCC---GGCTTTTGTTGTTCATACAGGGCGTGGTGACCGTGGCCGCGGCCGCTGAGGAGCGA
AGCGTCGTCGGCGAAGTGGTGGCGCGGATGGACATCGAGGTCAACGACTACCCTGGATCCAGCGCCAACGGCCGCCATGA
GCCGCCCAGGGGCCCCGGGAGGGGGTGA----------------------------------------------------
--------------------------------------------------------------------------------
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>chr3B_1_TraesCS3B01G370600
GGACACATGGCACGCCCCTATTTTTATACATTGGAAACATTTTTTCTATACATATTTAAAATTACCAAATATATATATGT
AATTTGAATAACATTTTCAAAAATGTTAAAAAAATTCAAAAATATAAGTAAAGGTTATGTTTGTGATATATATAATTAGA
ATATTTGAAAGTATAAACAACAATAAAAAAATAAATAACGAAAAAACCCAGAAAAAGAACGATTCAGTGGACTCCCGCGC
GCCTGTGCCGGGCCAGTATGGCGCTCGCTTCAGGTGAGCTACGATCGAGCTCGCGTCGAGCGAGGTATAGGTTCGCCCAT
GCCGTACACTCAAAAATACCTCTACTAGCTACTGAT---ATTTCCCCTGGATCCAAGCATGTGTGGTGCCGACTGCCGAC
GCCCGATCTACCGAGCATCCACCGCAGCTGAGTTCTCT--GACCCCGGACGCATTCTGCTGCGTCGTTGACCACCATAGC
CCAATCATACGGGAGCACGCATGATGTTCAGCCTCCGCAC-GCGCATCGCCCCCACTCTGCCGGACACATTGCG-----C
ACTCGTCGACGCACCGGGCCTGCGCACGCGACACCTCGCACTCCGCCGCAGGTCTCAGTGTCACCCAGCTCGGACGGATG
ACAGCACTACGCGGACG------CGGACGGATCCAGCCGGAAAAATCCAGAGAAGCGAGAAGGCCCAGCACAGCATCACA
AGCACTGTAGTGCGCACGCAGAGACAAAAGCTCACCATGGCGCGTGAAGTTGACTTTTGAGCGAGAGGGAGGGACGAT--
-----GGAGCGGCCCTCCCCGCCGTATAAAATCCCCCTCGCACCCACCACCCGAGGCACCATTGTCGCGCGCAGCAGCTC
GATTGTAGCCAAGTGCGGTGTATACTTGTGTGGAAGCCGGCCAGCGAGAGAGCCCAGATGCTTGA---------------
---CGGAAGAGAGGCGGAGCTTGGAGGTGGACC--------ATAGCACGCACGGTGCTCCC---------TCTTCGTTCT
CGTTGTGGGGA--------AGAGGG------CGATGGAGTGCAGGAAGATGAAGCCCGTCCTTGCTCTCGTGCTGCTGCT
GTCGTGCCATCTTCTTCTTCCGCTGGTCTCCTCCGTGCCCGTGTCGAGTAAGTGTTTGACCCCCAACCCCATGCATTCAT
GCACGC-------------------------ATGCATGGACCTTAATATCAGTTCATCTTCTTTCTTGGCATGTGT----
---CTGTGCATGCATGTTACTACTTTCGTGCATGCATTTATGTATCCTTGTTCTTGGATGCAGGAAGCGTGTCCTTGGAA
AATCATCAAGCCTCAGCTTCAAGTCTGACTCCGGAGGCGGTGCCTGTTCAGGTCAATCTCT--CCCTCTACCTGATGCCT
TTCCCGTTCTTGTAGATGTATATCTCTGTTCC-TTAAGCGGATTAAATTAGTTGTGCCTTGATGATAGATGCCGAATGTT
ACTTGTACAGAGTCATACGTACGTACCTGGCTCTGGCTGCTTCCTGCTTGCCAGTGGCCGGAGCCGTCACCATGGATGGC
TTGCCTGTTCCCTTGTCTGTTCAGTCGTTCAGAGGCTCGAAGCTATCGCATAAGGCATAACATATTTCTG----------
--------------------------------------------------------------------------------
-----TTAACCATTTGACTAGGGAGGGAGGTAGCGCACTCACACTGAGAGTTTAAGTCAAGTGCTCTCTGTAGCTGGTGT
CCACCATAGAGCACTCATCAGTCAGCCACTCACTGACGCGGCACCCACAGTTTGACAAAATCACAAAATCGCATGTGACC
TTTGGACGCCCGGAAGAGCATTCACGAAGCTGTGTCGGCCGGTTGCCAG----TGCACTGATCCCATGTCGAGTCACATG
CACGCACGGCTAGATAAGCCGGGCCGGCCGGCCGCAGTGCAGCCCACATGCGTGGCCACTCCGGTACTCCCCACAAACCA
TTTGCTGTACTATATACTTGTATACTCCCTCCGTTTCTAAATACTTGTCTTTCTAGTCATTTCAACAAATAACTACATAC
GAAATAAAATGAGTGAATCTACACTCTAAAATATATCTACATACATCCGTATGTAGTAGTCATTTGAAATGTCTATAAAG
ACAAATATTTAGGAACGGAGGGAGTAGTTGTATTGCACCCACCCACACCATCGAAAGGTCCACCTCGCTCGTGC-AACAA
GAACATTCCCGGTGCGGC--GTGGTGTTCGCCTGCAAGTTGCAAACTGAGTACATGCATCTG---TATGTATATTCAGCT
TGAAGTGTGTGACACTGACCC---GGCTTTTGTTGTTCATACAGGGCGTGGTGACCGTGGCCGCGGCCGCTGAGGAGCGA
AGCGTCGTCGGCGAAGTGGTGGCGCGGATGGACATCGAGGTCAACGACTACCCTGGATCCAGCGCCAACGGCCGCCATGA
GCCGCCCAGGGGCCCCGGGAGGGGGTGAAGTCGACCTGCGGAGCCTCCGTGTATAGGGAGATTAGTAATGGGTCTAGCTA
GTCTAGTCTAGATAGCAC-------------------TGTTGGTGG--------TGAGTCCAACGGGTTAAACATGTCTC
TGCTAACTCTCGAGAGAAAGGACGGAGCCATTTTAACTACTCC-------------------------------------
------TATAGTATATGCGTGTGCCTCTATGGTCTATGCCCATGTTTTTCTTTTCTTTTTCTGATTGAGTATGGCCAC--
--------------------------------------------------------------------------------
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---------------------GTGTGTCTGTCAATTTGCACTCAGTGACACGAAATGAACAGGACCGAGCGGGCAGAATT
CTACCTTTGCTTCTTTGGCTACCTATTTCAGTTCGGGAGAATCCTATGCTCCTCAATAGTGACACATTACCTATTTGTAA
GTTGACTGAATTTGCATTTGGATAAGTTGATTTTATGGGAGGTGA---------------AAGGAGCTGAAGGAAGAAGA
AAGAAGATACT---------------------------------------------------------------------
--------CCATTTCTCATGCAGCCGACGTCGACTTCCGCAGTTAATTCCGTTGCGTGCTTGAAGCACCTTCTCAA--CT
GTGATAGTGA-----TCAACAGTTCAACAAGGGCTGCAAACTGTGCAACCACGGGTGTAGAGTTCAACATGGCACAAGTC
GGCCGATAGCTAATGAAGTTAAGAATGAACAGTAGTGCGGTGTCAACATATATCAACAGATCTGTAAGGGG---TGTACG
GTTTGATATGGGAACAGAGGGGTCGGACGATTAGAAGCTAAATAAATCTGGATCGCTGCGGGCGTTCCTT-----TGGAG
ATAAGCAGAGTGATAAGCATGGACGAGAAATCCTATATACCGCTAACTGTGGCAAATTGCCCCTGCGAGCAGCGAGCAAA
CCGGGGATGGGTCAGTCCAAGTAGCTAAGATCTGTTTTTTCTTTCCACGGGGTTTCCATTTTTTCTTTTTCTTTTTTATT
CTTAACTGGATTCCTTTTCCTTTTATTTTTTAGTTTATATGAAAATGGATTTTTCTCGTTTTTATTTTATTTTTATTTTT
GTTTCTCCTGTTTTTTCTTTTTAAAATA
>chr3A_339
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------CCTCTACTAGCTACTGATGATATTTCGCCTGGATCGACGCATGTGCGGTGCCGAC-------
GCCCGATCTACCGAGCATCCACTGCATCCGAGCTCTCC--GACTCC-GACGCACTCTGCGGCGTCGTTGACCACCACGGC
CCAATCATACGGGAGCACGCGTGATGTTCAGCCTCCGCAC-ACGCATCGCCCCCACTGTGCCGGGCACATTGCGATGCGC
ACTCGTCGACGCGCCGGGCCTGCGCACGCGACACCTCGCCCTTGGCCGCAGG--TCAGTGTCACCCAGCTCAGACGCATG
A-------ACGCGGACGGACGGACGGACGGATCCAGCCGGAAAAATCCAGAGAAGCGAAAAGGCCCCAGC--GCAGCACA
GGCACTATAGTGCGCACGCAGAGCCAAGAGGTCGACATGGCGCGTGAAGTTGACTTTTGAGCGAGAGGGAGAGACAAAGG
ACTCAGGAGAGGCCCTCCCCGTGGTATAAAATACCCCTCACACCCACCACCCAAGTCACCATTGTCGCGCGCAGCAGCTC
GATCGTAGACAAGTGCAGTGTATACTTGTGTGGCAGGCGGCGAGC------------------GA---------------
---CAGAAGAGAGGCGGAGCTTGGAGGTGGATCATAGGCTGATAGCGCGCACGGTGCTCCCCTCTCCTCCTCATCGTTTT
CGTTGTGGCCTTGTGTGGTAGAGGG------CGATGGAGTGCAGGAAGATGAAGCCCGTCCTTGCTCTCGTGCTGCTGCT
GTCGTGCCATCTTCTTCTTCCGCTGGTCTCCTCTGTGCCCGTGTCGAGTAAGTGATTGACCCCAT-CCCCATGCATTCAA
GAATGCATGGACCTTCCTTTCAAAAAAAAGAATGCATGGACCTTAATATCAGTTCATCTTCTTTCTTGGCATGTGTGATG
TGTCTGTGCATGCATGTCAG---TTTCGTGCCTGTATTTATGCATCCTTGTTCTTGGATGTAGGAAGCGTGTCCTTGGCA
AATCATCAAGCCTCAGCTTCTAGTCTGACTCCGGAGGCGGTGCCTGTTCAGGTCAATCTCTCTCCCTCTACCTGATGCCT
TTGCCGTTCTTCTATATGTATATTTCTGTTCC-TTAAGCGGATTAAACTAGTTGTGGCTTGATGATAGATGCCGAATGTT
ACTTGTACACAGTCATA----CGTACCTGGCTCTGGCTGCTTCCTGCTTCCCAGTGGCCGGAGCCGCCACCATAGATGGC
TTGCCTGTTCCCTTGTCCGTTCAGTCGTTCAGAGGCTCGAAGCTAGCGCATAACATTGTGCCGTGACGGCACTAGCTAAG
CAGGAAACATAATAATTGATAGTTCTTTCTACTCCCTCCGTCCTATAATGTAGGATTAAGACATTTTTTGACACTGGAGT
GCATATTAACCATTTGACTAGGGAGCTA---AGCGCACTCACGCTGAGGGTTTAAGTCAAGTGCTTTCTGTAGCTGGTGT
CCACGATAGAGCACTCATCAGTCAGCCACTCACTGACGCGGCACCCACAGTTTGACAAAATCACAAAATCGCATGTGACC
TTTGGACGCTCCGAAGAGCATACCCGAAGCTGCGTCGGCCGGTTGCTAGCTAGTGCAGTGATCCCATGTCCAGTCACATG
CATGCACGGCTAGATAAGCGCGGCCTGCCGGCCACAGTGCAGCCCACATGCGTGGCCACTCCCCATAAGCCATACTTGTG
TAGTTGC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------ATTGCACCCATCCACACGATCGAAAGGTCCACCTCGCTCGTGCAAACAA
GAACATTCCCAGTGCGCGGTGTGGTGTTTGCCTGCAAGTTGCAAACTGAGTGCATGCATCTAGAATATGTATATTCAGCT
TGAGGTGTGTGACACCACTAACGTGGTTTGTGTTGTTCATACAGGGCGTCGTGACGACGGGCG------CCGAGGAGCAA
AGCGTCGTCGGCGAAGTGGTGGCGCGGATGGACATCGAGATCAACGACTACCCTGGATCCAGCGCCAACGGCCGCCATGA
GCCGCCTAGGAGCCCTGGGAGGGGGTGAAGTCGATCCGCAGAACCTCCGTGTATAGGGAGATTAGTAATGGGT-----TA
GTCTAGTCTAGATAGCAC-------------------TTGTTGGTGATGACTCATGAGTTCAACGGGTTAAACATGTCC-
-------------GAGCAAGGAAAGAAGCATTCTAACTACTTTCTAATAGTGTCAAAATTGGTCTTACATTTTGATACAG
AGGGAGTATATTATATGTGTGTGCCCCTATGTTCA-----------TGTTTTTCATTCTTTTAATATAGTATGTCCATGT
GTGTCTGTCAATGCCGACCATCGCTCCAGGGCTCCCTCAATCGCTCTCTCTAGGGCGATCAAGGGGCCAACCCCAGCGCC
CCGGCTGCCGCCTCCTCTCCTCCACCTCGTCGTCCCTAGAGACGTGCGCCGACTAAGCCCGGGCGCCACCGGTGATGGGG
ATGACGGGAATCTAGGTTGCAGCCCCACGGTATGGAGGGCCCGGCGACGCGAGATCGCCCTTCGGTCTTTGTCTTTCCCG
GCGGTTCGGCGCTACTCCGGCGGCTTGGTCGGGAGGGCGGATCAGGAGGGGATGTGGCCATGGTTGACTGGTCGGCGGCG
CCTCCGGTCAGATCTGATCTGGCCGGTGCCGCTGGCGGTGGTGGCTATCTCCTTCGTCGGAGGTGGTCGACACGAGGCTG
CATGATCAGATCTCGAGATCCGCCATCTACTTCCGGCTGCGAGTCGGGAAGACATAGTTGGCGGTGAAAACCGAACCGAT
GGCAGGCGATGGCGATGTTCTGCGTCGTTACCTTGATGAAGGCATCATCGTGTAACTACTGTCGACCCACTCGTGCTGCT
CCGGGGGAAACCCTAGGATCTGGTCTCCAGATCAGACGATGACGGTATTGCGGTGTCGTTTTCTCTCTTGCGAGCATTGT
TTGTGGAGCAGAGCTGGAAGACAGAGGCAGGAGGTGGAGCGGTTTCGTCTTGCATGGAGCTTTCGATGGAGATGTCAAGT
CATGCCTGGCCGACAGGTGCTACGCTGTGTCATGCCTGGTCGGCGGGTGCTACGCACGACAGATCTTTTAGAATCTTCGC
GCCTGGACGGATGAGCACGTGGCGGTGGCGCCGTTGGGCGCCGTGGTGACGTCGACGGATGGACGTACTGGCAAAGATGA
TGTAGATCTCTCTCCTAAAGATGGGTCAGCGGTTCGATGATGATGGCGGTGTCTAAAACGTGAACATATGGTGTACGCTT
TAGGTCTGCTGCACCGGTTGTGGGTTCCAATATGTTATGTGGATGGATCGGCGACGGCACCAGTTTTAGATATGGGGAGT
GAGAGCACTGCACATCATCGAGTTTTGTAGGTGTGAGTGATGGCTTCAGGTGACTTGATGTATGTTCTTGTTAGACCTTT
TTTTTAAATGAGAGGGGTTTCCCCCCGCCCCAACTTTTTTATTGAAAGCCAAGGCAAACCAACACACACAGACTGTTAAG
CAGTGCTCGGCAACAGCCAAAGAGTAGCTGTCACAGATGCGAACATGAGCAGGGTTCAAACAACTATCCCTATTACAGTT
GTGTTCTTGTTAGACTTATGTTGAATAATAAATAAAGATGGCCGTATGTATCTATTGGTGCAGAGGCCGGGGGTCTTAAC
CGACTTTTCCCCAAGAAAAATGTGTGTATGTCAATTTGTACTCAATGACACCAAATGAA-------------------TT
CTACTTTTGCTTCTTTTGCTAGCTATTTGAGA-ATTT------CTATGCTCCTCAATAGTGGAACGATAGCTATGTGTGA
GTTGACTTAATTTGTATTTGGGTAAGTTGATTTTATGGGAGGAGAAACGGTTGAAGAAGGAAGGAGCTAAAGGAAGAAGA
AAGAAGAAGAACTGTCCAAACTGTTGGATCTTAATCAAATGGCATGAAAAAATCGACTTTTTCAAAATAAATTTGCAGGC
GTCGGTCCCCATTTCTCATGCAGCCGACGTCGACTTCCGCAGTTAATTCCGTTGCGTGCTTGAAGCACCTTCTCTCAACT
GTAATGATCAACAATTCAACAGTTCAACAAAGACTGCAAACTGTGCAACCACGGGTGTAGAGTTCAACATGGCACAAGTC
GACCGATAACCGATGAAGTTAAGAATGGACAGTAGTGCGGTGTCAACATATATCAACAGATCTGAAAGGAA---CGTACG
GATTGATATGGGAGCAGAGGGATCGGCCGAATAGAAGCCAAA--ATTCTGGATCGCTGGCGTGCGTTCCTTTCAATGGAG
ATAAGGAGAGCCATAAGCATGGACG-------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>chr3D_410
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------------GAGCATCCACTGCATCTGAGCTCTCCTGGACTCC-GACGCACTCTGCGGCGTCGTTGACCACCGCAGC
CCAATCATACGGGGGCACGCATGATGTTCAGCCTCCGCACGGCGCATCGCCCCCACTGTGCCGGACACATTGCGATGCGC
ACTCGTCGACGCACCGGGCCTGCGCACGCGACACCTCGCCCTTGGCCGCAGG--TCAGTGTCACCCAGCTCGGACGCATG
A-------ACGCGGACGGACGGG--------TCCAGCCGGAAAAATCCAGAGAAGCGAAAAGGCCCCAGCA--CAACACA
GGCACTGTCGTGCGCACGCAGAGACAAGAGCTCAACATGGCGCGTGAAGTTGACTTTTGAGCGGGAGGGAGGGACAAAGG
ACCAAGGAGAGGCCCTCCCCGTGGTATAAAATACCCCTCACACCCACCACCCAAGGCACCATTGTCGCACGCAGCAGCTC
GAT---AGCCAAGTGCAGTGTATACTTGTGCGGTAGGCGGCGAGC------------------GAGAGAGCCTAGACGCT
CGACGGAAGAGAGGCGGAGCTTGGAGGTGGTTCATAG------------CACGGTGCTCCCCTCCCTTGCTCTGCGTTTT
CGTTGTGGTGA--------AGATGGCGATATCGATGGAGCGCAGGAAGATGAAGCCCGTCCTTGCTCTCGTGCTGCTGCT
GTCGTGCCATCTTCTTCTTCCGCTGGTCTCCTCCGTGCCTGTGTCGAGTAAGTGTTTGACCTCCAACCC----CATGCAC
GCATGCATGGACCTTA-------------------------CTTAATATCAGTTCATCTTCTTTCTTGGCATGTGT----
---ATGTGCATGCATGCATCTTAATTTTGAG--------------CCTTGCTCTCGGATGTAGGAAGCGTGGCCTTGGGA
AATCATCTAGCCTCAGCTTCTAGTCTAACTCTGGAGGCGGCGCCTGTTCAGGTCAATCTCTCA--CTCTACCTGATGCCT
TTGCCGTTCTTGTAGATGTACAGTATATTTCTGTTAAGCGGATTAAATTAGTTGTGGCTTGATGATAGATGTCGATTGTT
ACTTGTACACAGTCATA----CGTACCTGGCTCTGGCTTCTT-CTGCTTGCCAGTGGCCGGAGCCGTCACCATGAATGGC
TTGCCTGTTCCCTTGTCCGTTTCAGTATTCAGAGGCTCGAAGCTAGCGCATA-CATTGTGCCGAGACGGCACTAGCTA-G
CAGGAAAC---ATAATTGATAATTCTTTCTA-------------------------------------------------
-CATATTAACCATTTGACTAGGGAGGGAGCTAGCGCACTCACACTCAGAGTTTAAGTCAAGTGCTCTCTGTAGCTGGTGT
CCACCATAGAG-------------------CACTGACGCGGCACCCACAGTTTGACAAAATT--------GCATGTGACC
TTTGGACGCTCGGAAGAGCATTCCCGAAGCTGTGTCGGCCGGTTGCCAG----TGCACTGATCCCATCCCCAGCCACATG
CATGCACGGCTAGAT----------GGCCGGCCGCAGTGCAGCCCACATGCGTGGCCACTCCTCATAAGCCATTC-----
--------------------------------------------------------------------------------
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-----------------------GTAGTTGTATTGCACCCACCCACACGATCGAAAGGTCCACCTCGCTGGTGC-AACAA
GAACATTCCCGCTCC-CGGTGTGGTGTTTGCCAGCAAGTTGCAAACTGAGTGCATGCATCTAGAATATGTATATTCAGCT
TGAGGTGTGTGACACTAACGC---GGCTTTTGCTGTCCATACAGGGCGTGGTGACCGCGGCCG------CTGAGGAGCGA
AGCGTCGTCGGCGAAGTGGTGGCGCGGATGGACATCGAGGTCAACGACTACCCTGGATCCAGCGCCAACGGCCGCCATGA
GCCGCCCAGGAGCCCCGGGCGGGGGTGAAGTCGATCCGCAGAACCTCCGTGTATAGGGAGATTAGTAATGGCTCTTC---
-TCTAGTCTAGATAGCGCTTGAAGTCCGGAAGATACTTGTTGGTGG--------CGAGTCCAACGGGTTAAACATGTTTC
TGCTAGCTCTCAAGAGCAAGGAAAGAAGCATTCTAAGCACTTTTCGATAGTGTCAAAAATGGTCTTACATTTTGGGACGT
AGGGAGTATATTATATGCGTGTACCCATATGTTCA-----------TGTTTTTCATTCTTTTGATAGAGTATGGACAT--
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---------------------CTGTGTATGTCAATTTGTACTCAATGACACCAAATGAACAAGACCGAGCGGGGAGAATT
CTATCTTTGCTTCTTTTGCTAGCTATTTTAAGTATTT------CTGTGCTCCTCAATAGTGACACAATAGCTATCTGTAC
TC-GAGTTAATTTGTATTTGAGTAAGTTGATTTTATGGGAGGACAAACAGTTGAAGAAGGAAGGAGCTGAATGAAGGAAA
AAGAAAGAAGAAC-----AACTATTGGATCTTAATCTAATGGCAT-AAAAAATCGACTTATTCAAAATAAATTTTCACGC
ACCAGTCCCCATTTCTCGTGCAGCCGATGTCGACTTCCGCAGTTAATTCCGTTGCGTGCTTGAAGCACCTTCTCAG--CT
GTAATGATCAACAGCTCAACAAG--------GACTGCAAACTGTGCAACCACGGGTGTAGAGTTCAACATGGCACAAGTC
GGCCGATAGCTAATGAAGTTAAGAATGAACAGTAGTGCGGTGTCAACATATATCAACAGATCTGAAAGGCAGAATGTACG
GATTGATATGGGAGCAGAGGGATCGGCCGATTAGAAGCT--A--AATCTGGATCGCTGGTGTGCGTTCCTTTCAACGGAG
ATAAGCAGAACCATAAGCATGGACG-------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS--------------------------S--------S-S-------S---------SSSSSSS
----------------------S---S-----S----S-----S--S------S-----S----------------S---
---------------------------------------------------------S----------------------
---------------------------------------S--SS--------SS----------------------S---
-SSSSSSS--------------------------------------------------S-------SSSSSS---S----
S--------------------------S------S----------------------------------------S-S--
---------S-----------SS---------S------S------------S---------------------------
---S------------S----------------S--S----S---SSSSSSSSSSSSSSSSSS-----------------
-------------------------------S--------------S-------------------------------S-
--------S-----------------------------------------------------------------------
-------------------------------------------------------------------------------S
---S----------------------------------------------------------------------------
-----------------S---SS--------S--S-------S-----------------S-----------------S-
--------------------S-----------------------------------------------------------
--S--------------------S--------------------------------S-----------------------
---------S-------SSSS-----------------------------------------------------------
-----------------S---------------------------S-------SSSSSSS-SS-SSSSSS----------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
---------S-------------S----------------------------------------------S---------
--S----------------SS-----------------------------------------SSSSSSS--SSSSSSSSS
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSS-------------------------S-------------------------------
----------------SS----------S----------------------S---------S------------------
---S------------S--S-------------------------------------S-----SSSSSS-----------
--------------------------------------------------------------------------------
----------S-----------------------S-S--S--S--------------------------------SSS--
--------------------------------------------------------------------------------
-----S-----S----S-----SS--SS----S--------SS-------------------------------------
----------S--------------S-----S--SSSSSSSSSSSS-S-S---SS--S--S----S-----------S--
--------------------------------------------------------------------------------
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---------------------------S----------S-----S------S---------S-----------S------
----------------S----S------S--S-SSSSSSSSSS-----------------------S--S----S-----
-------S------S------S--------------------S-------------------------------------
-------S-SS---------------------------------------------------------------------
---------------------------------------------------------------------------S----
--S--SS-S---------------------S-S-----------------------------------------------
----------------------------------------------------------------S----SS---------
-S-----------S-------S----S---------------SS--------------SS-SSSS-S-S-----------
----------SS-------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_384
--------------------------------------------------------------------------------
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--------------------------------------------CCCTGGATCCAAGCATGTGT----------------
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>reverse_1790
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-----------------------------GTAGCGCACTCACACTGAGA-------------------------------
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>forward_423
--------------------------------------------------------------------------------
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---CGATCTACCGAGCATCCACC---------------------------------------------------------
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>reverse_2600
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---------------------------------------GGAGCCTCCGTGTATAGGGA---------------------
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----------------------------
