Multiple sequence alignment - TraesCS3B01G357500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G357500 chr3B 100.000 2732 0 0 1 2732 567805997 567808728 0.000000e+00 5046.0
1 TraesCS3B01G357500 chr3A 92.708 1440 58 19 628 2047 573112082 573113494 0.000000e+00 2034.0
2 TraesCS3B01G357500 chr3A 91.169 419 20 5 2316 2732 573113491 573113894 1.110000e-153 553.0
3 TraesCS3B01G357500 chr3A 83.056 301 34 12 1 298 573111323 573111609 9.710000e-65 257.0
4 TraesCS3B01G357500 chr3A 89.655 116 5 4 2021 2133 12915504 12915393 1.020000e-29 141.0
5 TraesCS3B01G357500 chr3D 94.897 1117 38 5 946 2047 434210827 434211939 0.000000e+00 1729.0
6 TraesCS3B01G357500 chr3D 92.840 419 12 7 2316 2732 434211936 434212338 2.340000e-165 592.0
7 TraesCS3B01G357500 chr1B 95.473 243 7 4 2043 2281 521004630 521004388 4.270000e-103 385.0
8 TraesCS3B01G357500 chrUn 98.693 153 2 0 2129 2281 374420092 374420244 3.470000e-69 272.0
9 TraesCS3B01G357500 chr6B 98.693 153 2 0 2129 2281 538304682 538304530 3.470000e-69 272.0
10 TraesCS3B01G357500 chr6B 94.624 93 1 1 2042 2134 229201111 229201023 1.020000e-29 141.0
11 TraesCS3B01G357500 chr5B 98.693 153 2 0 2129 2281 270012321 270012169 3.470000e-69 272.0
12 TraesCS3B01G357500 chr5A 98.693 153 2 0 2129 2281 613698327 613698479 3.470000e-69 272.0
13 TraesCS3B01G357500 chr4B 98.693 153 2 0 2129 2281 492204558 492204406 3.470000e-69 272.0
14 TraesCS3B01G357500 chr4A 98.693 153 2 0 2129 2281 498210997 498210845 3.470000e-69 272.0
15 TraesCS3B01G357500 chr4A 93.939 99 0 3 2038 2134 648402141 648402235 7.880000e-31 145.0
16 TraesCS3B01G357500 chr2A 98.693 153 2 0 2129 2281 423776306 423776154 3.470000e-69 272.0
17 TraesCS3B01G357500 chr2A 98.693 153 2 0 2129 2281 574971889 574971737 3.470000e-69 272.0
18 TraesCS3B01G357500 chr2A 94.737 95 1 1 2040 2134 423776439 423776349 7.880000e-31 145.0
19 TraesCS3B01G357500 chr2B 95.652 92 0 1 2043 2134 587727810 587727897 7.880000e-31 145.0
20 TraesCS3B01G357500 chr2B 94.681 94 1 1 2041 2134 586904892 586904803 2.840000e-30 143.0
21 TraesCS3B01G357500 chr2B 90.566 106 4 3 2030 2133 793142440 793142541 4.750000e-28 135.0
22 TraesCS3B01G357500 chr6A 95.506 89 0 1 2046 2134 472008191 472008107 3.670000e-29 139.0
23 TraesCS3B01G357500 chr7B 100.000 28 0 0 414 441 641104445 641104418 5.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G357500 chr3B 567805997 567808728 2731 False 5046.0 5046 100.000000 1 2732 1 chr3B.!!$F1 2731
1 TraesCS3B01G357500 chr3A 573111323 573113894 2571 False 948.0 2034 88.977667 1 2732 3 chr3A.!!$F1 2731
2 TraesCS3B01G357500 chr3D 434210827 434212338 1511 False 1160.5 1729 93.868500 946 2732 2 chr3D.!!$F1 1786

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
630 960 0.1792 GGCAACGCAAAGTACATCCG 60.179 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2120 2477 0.039618 GGAGGGTTTGGATCCAAGCA 59.96 55.0 33.84 17.59 38.6 3.91 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 8.986847 CATACTTATGTCATCAGGAGATTTGAC 58.013 37.037 0.00 0.00 31.01 3.18
42 43 3.759527 TCAGGAGATTTGACGAGTACG 57.240 47.619 0.00 0.00 45.75 3.67
44 45 2.093106 AGGAGATTTGACGAGTACGCT 58.907 47.619 0.00 0.00 43.96 5.07
52 53 4.380841 TTGACGAGTACGCTTATGGAAT 57.619 40.909 0.00 0.00 43.96 3.01
53 54 3.961182 TGACGAGTACGCTTATGGAATC 58.039 45.455 0.00 0.00 43.96 2.52
54 55 2.971915 GACGAGTACGCTTATGGAATCG 59.028 50.000 0.00 0.00 43.96 3.34
55 56 2.357009 ACGAGTACGCTTATGGAATCGT 59.643 45.455 0.00 0.00 43.96 3.73
59 60 5.628193 CGAGTACGCTTATGGAATCGTAATT 59.372 40.000 0.00 0.00 40.29 1.40
63 64 6.861065 ACGCTTATGGAATCGTAATTTGAT 57.139 33.333 0.00 0.00 35.74 2.57
89 90 9.844790 TGATACATGATTGTTGAGAACATTTTC 57.155 29.630 0.00 0.00 41.79 2.29
92 93 8.583810 ACATGATTGTTGAGAACATTTTCAAG 57.416 30.769 0.00 0.00 41.79 3.02
93 94 7.170320 ACATGATTGTTGAGAACATTTTCAAGC 59.830 33.333 0.00 0.00 41.79 4.01
94 95 5.686841 TGATTGTTGAGAACATTTTCAAGCG 59.313 36.000 0.00 0.00 41.79 4.68
97 98 5.645624 TGTTGAGAACATTTTCAAGCGAAA 58.354 33.333 0.00 0.00 36.54 3.46
98 99 5.743398 TGTTGAGAACATTTTCAAGCGAAAG 59.257 36.000 0.00 0.00 38.21 2.62
99 100 5.499139 TGAGAACATTTTCAAGCGAAAGT 57.501 34.783 0.00 0.00 42.00 2.66
114 115 2.412847 CGAAAGTGCTTCCCGAACATTC 60.413 50.000 0.00 0.00 0.00 2.67
133 134 7.899178 ACATTCGTCAATACAACATTGTAGA 57.101 32.000 10.09 1.09 45.80 2.59
137 138 8.541133 TTCGTCAATACAACATTGTAGATGAA 57.459 30.769 17.71 17.25 45.80 2.57
138 139 8.541133 TCGTCAATACAACATTGTAGATGAAA 57.459 30.769 17.71 10.72 45.80 2.69
139 140 8.655970 TCGTCAATACAACATTGTAGATGAAAG 58.344 33.333 17.71 15.47 45.80 2.62
140 141 7.904977 CGTCAATACAACATTGTAGATGAAAGG 59.095 37.037 17.71 10.70 45.80 3.11
141 142 8.730680 GTCAATACAACATTGTAGATGAAAGGT 58.269 33.333 17.71 0.00 45.80 3.50
142 143 9.295825 TCAATACAACATTGTAGATGAAAGGTT 57.704 29.630 15.37 0.47 45.80 3.50
145 146 9.733556 ATACAACATTGTAGATGAAAGGTTACA 57.266 29.630 10.09 0.00 45.80 2.41
146 147 8.458573 ACAACATTGTAGATGAAAGGTTACAA 57.541 30.769 0.00 0.00 40.16 2.41
147 148 8.349983 ACAACATTGTAGATGAAAGGTTACAAC 58.650 33.333 0.00 0.00 40.16 3.32
148 149 8.349245 CAACATTGTAGATGAAAGGTTACAACA 58.651 33.333 0.00 0.00 38.42 3.33
149 150 8.635765 ACATTGTAGATGAAAGGTTACAACAT 57.364 30.769 0.00 0.00 38.42 2.71
150 151 9.077885 ACATTGTAGATGAAAGGTTACAACATT 57.922 29.630 0.00 0.00 38.42 2.71
166 167 5.348164 ACAACATTGGCTTAGTTTGTCAAC 58.652 37.500 0.00 0.00 31.56 3.18
168 169 5.852282 ACATTGGCTTAGTTTGTCAACTT 57.148 34.783 0.00 0.00 40.66 2.66
171 176 7.200455 ACATTGGCTTAGTTTGTCAACTTAAC 58.800 34.615 0.00 0.00 40.66 2.01
185 190 1.679153 ACTTAACAACCAAAGCCCGTG 59.321 47.619 0.00 0.00 0.00 4.94
190 195 0.821711 CAACCAAAGCCCGTGAAGGA 60.822 55.000 0.00 0.00 45.00 3.36
206 211 5.565592 TGAAGGACACACATGATAATTGC 57.434 39.130 0.00 0.00 0.00 3.56
207 212 5.008980 TGAAGGACACACATGATAATTGCA 58.991 37.500 0.00 0.00 0.00 4.08
217 222 7.329962 CACACATGATAATTGCACATCTTTGTT 59.670 33.333 0.00 0.00 32.34 2.83
219 224 9.356433 CACATGATAATTGCACATCTTTGTTTA 57.644 29.630 0.00 0.00 32.34 2.01
306 311 8.682936 AAACATAATCATCACAATACTCCCTC 57.317 34.615 0.00 0.00 0.00 4.30
307 312 6.773638 ACATAATCATCACAATACTCCCTCC 58.226 40.000 0.00 0.00 0.00 4.30
308 313 4.342862 AATCATCACAATACTCCCTCCG 57.657 45.455 0.00 0.00 0.00 4.63
309 314 2.747177 TCATCACAATACTCCCTCCGT 58.253 47.619 0.00 0.00 0.00 4.69
310 315 2.430694 TCATCACAATACTCCCTCCGTG 59.569 50.000 0.00 0.00 0.00 4.94
311 316 0.535335 TCACAATACTCCCTCCGTGC 59.465 55.000 0.00 0.00 0.00 5.34
312 317 0.249120 CACAATACTCCCTCCGTGCA 59.751 55.000 0.00 0.00 0.00 4.57
313 318 1.134401 CACAATACTCCCTCCGTGCAT 60.134 52.381 0.00 0.00 0.00 3.96
314 319 1.559682 ACAATACTCCCTCCGTGCATT 59.440 47.619 0.00 0.00 0.00 3.56
315 320 2.769663 ACAATACTCCCTCCGTGCATTA 59.230 45.455 0.00 0.00 0.00 1.90
316 321 3.199071 ACAATACTCCCTCCGTGCATTAA 59.801 43.478 0.00 0.00 0.00 1.40
317 322 4.141482 ACAATACTCCCTCCGTGCATTAAT 60.141 41.667 0.00 0.00 0.00 1.40
318 323 5.071250 ACAATACTCCCTCCGTGCATTAATA 59.929 40.000 0.00 0.00 0.00 0.98
319 324 6.173339 CAATACTCCCTCCGTGCATTAATAT 58.827 40.000 0.00 0.00 0.00 1.28
320 325 7.038587 ACAATACTCCCTCCGTGCATTAATATA 60.039 37.037 0.00 0.00 0.00 0.86
321 326 5.818678 ACTCCCTCCGTGCATTAATATAA 57.181 39.130 0.00 0.00 0.00 0.98
322 327 5.794894 ACTCCCTCCGTGCATTAATATAAG 58.205 41.667 0.00 0.00 0.00 1.73
323 328 5.542635 ACTCCCTCCGTGCATTAATATAAGA 59.457 40.000 0.00 0.00 0.00 2.10
324 329 6.042781 ACTCCCTCCGTGCATTAATATAAGAA 59.957 38.462 0.00 0.00 0.00 2.52
325 330 6.228258 TCCCTCCGTGCATTAATATAAGAAC 58.772 40.000 0.00 0.00 0.00 3.01
326 331 6.042781 TCCCTCCGTGCATTAATATAAGAACT 59.957 38.462 0.00 0.00 0.00 3.01
327 332 6.710744 CCCTCCGTGCATTAATATAAGAACTT 59.289 38.462 0.00 0.00 0.00 2.66
328 333 7.228706 CCCTCCGTGCATTAATATAAGAACTTT 59.771 37.037 0.00 0.00 0.00 2.66
329 334 8.621286 CCTCCGTGCATTAATATAAGAACTTTT 58.379 33.333 0.00 0.00 0.00 2.27
419 424 8.943909 AGCTACATACGAATTAAGTAAAAGCT 57.056 30.769 14.73 14.73 35.06 3.74
447 452 9.791781 AAAGGTTTTATATTAGGGAAAATGGGA 57.208 29.630 0.00 0.00 0.00 4.37
448 453 9.434275 AAGGTTTTATATTAGGGAAAATGGGAG 57.566 33.333 0.00 0.00 0.00 4.30
468 473 6.212589 TGGGAGTAGTTGACAAGACATGATAA 59.787 38.462 0.00 0.00 0.00 1.75
528 858 8.064222 CCATACACTCATCGTTGAAATGTTATC 58.936 37.037 14.78 0.00 34.63 1.75
576 906 4.043750 TGCAAGAAAAATGACTTTGCGAG 58.956 39.130 3.48 0.00 0.00 5.03
578 908 3.288809 AGAAAAATGACTTTGCGAGGC 57.711 42.857 0.00 0.00 0.00 4.70
579 909 2.887152 AGAAAAATGACTTTGCGAGGCT 59.113 40.909 0.00 0.00 33.09 4.58
581 911 4.154918 AGAAAAATGACTTTGCGAGGCTAG 59.845 41.667 0.00 0.00 33.09 3.42
583 913 3.334583 AATGACTTTGCGAGGCTAGAA 57.665 42.857 0.00 0.00 33.09 2.10
585 915 2.621338 TGACTTTGCGAGGCTAGAATG 58.379 47.619 0.00 0.00 33.09 2.67
589 919 2.779755 TTGCGAGGCTAGAATGGAAA 57.220 45.000 0.00 0.00 0.00 3.13
590 920 3.281727 TTGCGAGGCTAGAATGGAAAT 57.718 42.857 0.00 0.00 0.00 2.17
592 922 2.170397 TGCGAGGCTAGAATGGAAATGA 59.830 45.455 0.00 0.00 0.00 2.57
593 923 2.545946 GCGAGGCTAGAATGGAAATGAC 59.454 50.000 0.00 0.00 0.00 3.06
595 925 3.432186 CGAGGCTAGAATGGAAATGACCA 60.432 47.826 0.00 0.00 44.41 4.02
596 926 4.133078 GAGGCTAGAATGGAAATGACCAG 58.867 47.826 0.00 0.00 43.49 4.00
597 927 2.620585 GGCTAGAATGGAAATGACCAGC 59.379 50.000 0.00 0.00 43.49 4.85
598 928 3.282021 GCTAGAATGGAAATGACCAGCA 58.718 45.455 0.00 0.00 43.49 4.41
599 929 3.696051 GCTAGAATGGAAATGACCAGCAA 59.304 43.478 0.00 0.00 43.49 3.91
600 930 4.158394 GCTAGAATGGAAATGACCAGCAAA 59.842 41.667 0.00 0.00 43.49 3.68
601 931 4.525912 AGAATGGAAATGACCAGCAAAC 57.474 40.909 0.00 0.00 43.49 2.93
602 932 4.154942 AGAATGGAAATGACCAGCAAACT 58.845 39.130 0.00 0.00 43.49 2.66
603 933 5.324409 AGAATGGAAATGACCAGCAAACTA 58.676 37.500 0.00 0.00 43.49 2.24
604 934 5.774690 AGAATGGAAATGACCAGCAAACTAA 59.225 36.000 0.00 0.00 43.49 2.24
605 935 5.649782 ATGGAAATGACCAGCAAACTAAG 57.350 39.130 0.00 0.00 43.49 2.18
606 936 3.826157 TGGAAATGACCAGCAAACTAAGG 59.174 43.478 0.00 0.00 34.77 2.69
607 937 3.193479 GGAAATGACCAGCAAACTAAGGG 59.807 47.826 0.00 0.00 0.00 3.95
608 938 3.525800 AATGACCAGCAAACTAAGGGT 57.474 42.857 0.00 0.00 33.78 4.34
609 939 4.650972 AATGACCAGCAAACTAAGGGTA 57.349 40.909 0.00 0.00 30.55 3.69
610 940 4.862641 ATGACCAGCAAACTAAGGGTAT 57.137 40.909 0.00 0.00 30.55 2.73
611 941 3.950397 TGACCAGCAAACTAAGGGTATG 58.050 45.455 0.00 0.00 30.55 2.39
612 942 3.279434 GACCAGCAAACTAAGGGTATGG 58.721 50.000 0.00 0.00 30.55 2.74
613 943 2.024414 CCAGCAAACTAAGGGTATGGC 58.976 52.381 0.00 0.00 0.00 4.40
614 944 2.620367 CCAGCAAACTAAGGGTATGGCA 60.620 50.000 0.00 0.00 0.00 4.92
615 945 3.088532 CAGCAAACTAAGGGTATGGCAA 58.911 45.455 0.00 0.00 0.00 4.52
616 946 3.089284 AGCAAACTAAGGGTATGGCAAC 58.911 45.455 0.00 0.00 0.00 4.17
617 947 2.159435 GCAAACTAAGGGTATGGCAACG 60.159 50.000 0.00 0.00 42.51 4.10
618 948 1.746470 AACTAAGGGTATGGCAACGC 58.254 50.000 0.00 0.00 42.51 4.84
619 949 0.616371 ACTAAGGGTATGGCAACGCA 59.384 50.000 15.27 0.00 42.51 5.24
620 950 1.003812 ACTAAGGGTATGGCAACGCAA 59.996 47.619 15.27 6.02 42.51 4.85
621 951 2.088423 CTAAGGGTATGGCAACGCAAA 58.912 47.619 15.27 5.77 42.51 3.68
622 952 0.887933 AAGGGTATGGCAACGCAAAG 59.112 50.000 15.27 0.00 42.51 2.77
623 953 0.251165 AGGGTATGGCAACGCAAAGT 60.251 50.000 15.27 0.00 42.51 2.66
624 954 1.003812 AGGGTATGGCAACGCAAAGTA 59.996 47.619 15.27 0.00 42.51 2.24
625 955 1.131693 GGGTATGGCAACGCAAAGTAC 59.868 52.381 0.00 0.00 42.51 2.73
626 956 1.807742 GGTATGGCAACGCAAAGTACA 59.192 47.619 0.00 0.00 42.51 2.90
627 957 2.422127 GGTATGGCAACGCAAAGTACAT 59.578 45.455 0.00 0.00 42.51 2.29
628 958 2.919666 ATGGCAACGCAAAGTACATC 57.080 45.000 0.00 0.00 42.51 3.06
629 959 0.878416 TGGCAACGCAAAGTACATCC 59.122 50.000 0.00 0.00 42.51 3.51
630 960 0.179200 GGCAACGCAAAGTACATCCG 60.179 55.000 0.00 0.00 0.00 4.18
644 974 2.000701 ATCCGTTCCCTGGCATCCA 61.001 57.895 0.00 0.00 0.00 3.41
660 990 2.975732 TCCAGCAAACATTGTGCAAA 57.024 40.000 0.00 0.00 44.74 3.68
663 993 4.197750 TCCAGCAAACATTGTGCAAATTT 58.802 34.783 0.00 0.00 44.74 1.82
694 1024 1.893137 GGTGGGCTAAACAGAAAAGGG 59.107 52.381 0.00 0.00 0.00 3.95
701 1031 1.179174 AAACAGAAAAGGGGCCGCTC 61.179 55.000 24.36 11.23 0.00 5.03
772 1102 1.606350 CGACGCGAGGACAGTCAAAC 61.606 60.000 15.93 0.00 34.80 2.93
886 1216 2.289444 CCGTCCATCTATAAATGCCCGT 60.289 50.000 0.00 0.00 0.00 5.28
953 1288 2.622011 GCATCACCAAAACGCCCGA 61.622 57.895 0.00 0.00 0.00 5.14
1173 1508 1.377856 GGCCAAGAAGAGCAGGGTC 60.378 63.158 0.00 0.00 0.00 4.46
1341 1688 0.536006 GCAACAGCACCTTGGACTCT 60.536 55.000 0.00 0.00 0.00 3.24
1347 1694 1.517832 CACCTTGGACTCTAGCGGG 59.482 63.158 0.00 0.00 0.00 6.13
1708 2058 3.914555 CGTTTGATCTGGATCTGAACG 57.085 47.619 23.29 23.29 43.64 3.95
1783 2133 3.006217 AGTTTCTCATTTTTCCTGCAGGC 59.994 43.478 28.91 8.96 34.44 4.85
1837 2193 9.403583 TCCTCTTGTATTTTTGTTTAGTTGTCT 57.596 29.630 0.00 0.00 0.00 3.41
1956 2313 3.833070 AGGTGAACCGAGACTTGAGTATT 59.167 43.478 0.00 0.00 42.08 1.89
1957 2314 5.014858 AGGTGAACCGAGACTTGAGTATTA 58.985 41.667 0.00 0.00 42.08 0.98
1958 2315 5.657302 AGGTGAACCGAGACTTGAGTATTAT 59.343 40.000 0.00 0.00 42.08 1.28
2008 2365 8.924511 TGAATTTTTCAGAACATAAGTCTCCT 57.075 30.769 0.00 0.00 34.08 3.69
2047 2404 6.317789 TGTGTTCAGAAAGGCAAGATTTAG 57.682 37.500 0.00 0.00 0.00 1.85
2048 2405 6.061441 TGTGTTCAGAAAGGCAAGATTTAGA 58.939 36.000 0.00 0.00 0.00 2.10
2049 2406 6.205464 TGTGTTCAGAAAGGCAAGATTTAGAG 59.795 38.462 0.00 0.00 0.00 2.43
2050 2407 5.182001 TGTTCAGAAAGGCAAGATTTAGAGC 59.818 40.000 0.00 0.00 0.00 4.09
2051 2408 4.910195 TCAGAAAGGCAAGATTTAGAGCA 58.090 39.130 0.00 0.00 0.00 4.26
2052 2409 5.503927 TCAGAAAGGCAAGATTTAGAGCAT 58.496 37.500 0.00 0.00 0.00 3.79
2053 2410 5.356190 TCAGAAAGGCAAGATTTAGAGCATG 59.644 40.000 0.00 0.00 0.00 4.06
2054 2411 4.097589 AGAAAGGCAAGATTTAGAGCATGC 59.902 41.667 10.51 10.51 0.00 4.06
2055 2412 3.294038 AGGCAAGATTTAGAGCATGCT 57.706 42.857 22.92 22.92 34.37 3.79
2056 2413 3.629087 AGGCAAGATTTAGAGCATGCTT 58.371 40.909 23.61 14.05 34.37 3.91
2057 2414 3.380637 AGGCAAGATTTAGAGCATGCTTG 59.619 43.478 23.61 14.30 36.67 4.01
2058 2415 3.490419 GGCAAGATTTAGAGCATGCTTGG 60.490 47.826 23.61 2.07 34.78 3.61
2059 2416 3.379372 GCAAGATTTAGAGCATGCTTGGA 59.621 43.478 23.61 7.37 34.78 3.53
2060 2417 4.037684 GCAAGATTTAGAGCATGCTTGGAT 59.962 41.667 23.61 13.45 34.78 3.41
2061 2418 5.240183 GCAAGATTTAGAGCATGCTTGGATA 59.760 40.000 23.61 9.98 34.78 2.59
2062 2419 6.666417 CAAGATTTAGAGCATGCTTGGATAC 58.334 40.000 23.61 7.76 31.60 2.24
2063 2420 4.993584 AGATTTAGAGCATGCTTGGATACG 59.006 41.667 23.61 0.00 42.51 3.06
2064 2421 3.819564 TTAGAGCATGCTTGGATACGT 57.180 42.857 23.61 0.00 42.51 3.57
2065 2422 2.698855 AGAGCATGCTTGGATACGTT 57.301 45.000 23.61 0.00 42.51 3.99
2066 2423 2.991250 AGAGCATGCTTGGATACGTTT 58.009 42.857 23.61 0.00 42.51 3.60
2067 2424 3.347216 AGAGCATGCTTGGATACGTTTT 58.653 40.909 23.61 0.00 42.51 2.43
2068 2425 4.513442 AGAGCATGCTTGGATACGTTTTA 58.487 39.130 23.61 0.00 42.51 1.52
2069 2426 4.572389 AGAGCATGCTTGGATACGTTTTAG 59.428 41.667 23.61 0.00 42.51 1.85
2070 2427 4.261801 AGCATGCTTGGATACGTTTTAGT 58.738 39.130 16.30 0.00 42.51 2.24
2071 2428 4.332819 AGCATGCTTGGATACGTTTTAGTC 59.667 41.667 16.30 0.00 42.51 2.59
2072 2429 4.495844 GCATGCTTGGATACGTTTTAGTCC 60.496 45.833 11.37 0.00 42.51 3.85
2073 2430 3.602483 TGCTTGGATACGTTTTAGTCCC 58.398 45.455 0.00 0.00 42.51 4.46
2074 2431 3.008157 TGCTTGGATACGTTTTAGTCCCA 59.992 43.478 0.00 0.00 42.51 4.37
2075 2432 4.196971 GCTTGGATACGTTTTAGTCCCAT 58.803 43.478 0.00 0.00 42.51 4.00
2076 2433 4.035208 GCTTGGATACGTTTTAGTCCCATG 59.965 45.833 0.00 0.00 42.51 3.66
2077 2434 5.423704 TTGGATACGTTTTAGTCCCATGA 57.576 39.130 0.00 0.00 42.51 3.07
2078 2435 4.761975 TGGATACGTTTTAGTCCCATGAC 58.238 43.478 0.00 0.00 40.25 3.06
2080 2437 5.657745 TGGATACGTTTTAGTCCCATGACTA 59.342 40.000 0.00 0.00 45.97 2.59
2091 2448 4.514401 GTCCCATGACTAAAAGTAGTGGG 58.486 47.826 17.22 17.22 46.41 4.61
2094 2451 5.422214 CCATGACTAAAAGTAGTGGGACT 57.578 43.478 0.00 0.00 40.82 3.85
2095 2452 6.540438 CCATGACTAAAAGTAGTGGGACTA 57.460 41.667 0.00 0.00 40.82 2.59
2096 2453 6.942976 CCATGACTAAAAGTAGTGGGACTAA 58.057 40.000 0.00 0.00 40.82 2.24
2097 2454 7.391620 CCATGACTAAAAGTAGTGGGACTAAA 58.608 38.462 0.00 0.00 40.82 1.85
2098 2455 7.881232 CCATGACTAAAAGTAGTGGGACTAAAA 59.119 37.037 0.00 0.00 40.82 1.52
2099 2456 8.718734 CATGACTAAAAGTAGTGGGACTAAAAC 58.281 37.037 0.00 0.00 40.82 2.43
2100 2457 8.026396 TGACTAAAAGTAGTGGGACTAAAACT 57.974 34.615 0.00 0.00 40.82 2.66
2101 2458 8.488668 TGACTAAAAGTAGTGGGACTAAAACTT 58.511 33.333 0.00 0.00 40.82 2.66
2102 2459 8.672823 ACTAAAAGTAGTGGGACTAAAACTTG 57.327 34.615 0.00 0.00 39.20 3.16
2103 2460 6.387041 AAAAGTAGTGGGACTAAAACTTGC 57.613 37.500 0.00 0.00 31.62 4.01
2104 2461 4.976540 AGTAGTGGGACTAAAACTTGCT 57.023 40.909 0.00 0.00 31.62 3.91
2105 2462 6.429521 AAGTAGTGGGACTAAAACTTGCTA 57.570 37.500 0.00 0.00 31.62 3.49
2106 2463 6.038997 AGTAGTGGGACTAAAACTTGCTAG 57.961 41.667 0.00 0.00 31.62 3.42
2107 2464 4.976540 AGTGGGACTAAAACTTGCTAGT 57.023 40.909 0.00 0.00 35.68 2.57
2108 2465 4.895961 AGTGGGACTAAAACTTGCTAGTC 58.104 43.478 0.07 0.62 42.17 2.59
2109 2466 4.593634 AGTGGGACTAAAACTTGCTAGTCT 59.406 41.667 0.07 0.00 42.42 3.24
2110 2467 4.930405 GTGGGACTAAAACTTGCTAGTCTC 59.070 45.833 0.07 1.39 43.29 3.36
2111 2468 5.148651 GGGACTAAAACTTGCTAGTCTCA 57.851 43.478 0.07 0.00 42.76 3.27
2112 2469 4.930405 GGGACTAAAACTTGCTAGTCTCAC 59.070 45.833 0.07 0.00 42.76 3.51
2113 2470 4.930405 GGACTAAAACTTGCTAGTCTCACC 59.070 45.833 0.07 0.00 42.42 4.02
2114 2471 4.895961 ACTAAAACTTGCTAGTCTCACCC 58.104 43.478 0.07 0.00 31.99 4.61
2115 2472 3.857157 AAAACTTGCTAGTCTCACCCA 57.143 42.857 0.07 0.00 31.99 4.51
2116 2473 4.373156 AAAACTTGCTAGTCTCACCCAT 57.627 40.909 0.07 0.00 31.99 4.00
2117 2474 5.499004 AAAACTTGCTAGTCTCACCCATA 57.501 39.130 0.07 0.00 31.99 2.74
2118 2475 4.473477 AACTTGCTAGTCTCACCCATAC 57.527 45.455 0.07 0.00 31.99 2.39
2119 2476 3.714144 ACTTGCTAGTCTCACCCATACT 58.286 45.455 0.00 0.00 0.00 2.12
2120 2477 4.097418 ACTTGCTAGTCTCACCCATACTT 58.903 43.478 0.00 0.00 0.00 2.24
2121 2478 4.081420 ACTTGCTAGTCTCACCCATACTTG 60.081 45.833 0.00 0.00 0.00 3.16
2122 2479 2.168521 TGCTAGTCTCACCCATACTTGC 59.831 50.000 0.00 0.00 40.74 4.01
2123 2480 2.432510 GCTAGTCTCACCCATACTTGCT 59.567 50.000 0.00 0.00 38.43 3.91
2124 2481 3.118592 GCTAGTCTCACCCATACTTGCTT 60.119 47.826 0.00 0.00 38.43 3.91
2125 2482 3.340814 AGTCTCACCCATACTTGCTTG 57.659 47.619 0.00 0.00 0.00 4.01
2126 2483 2.026822 AGTCTCACCCATACTTGCTTGG 60.027 50.000 0.00 0.00 0.00 3.61
2127 2484 2.027192 GTCTCACCCATACTTGCTTGGA 60.027 50.000 0.00 0.00 34.81 3.53
2128 2485 2.846206 TCTCACCCATACTTGCTTGGAT 59.154 45.455 0.00 0.00 34.81 3.41
2129 2486 3.118261 TCTCACCCATACTTGCTTGGATC 60.118 47.826 0.00 0.00 34.81 3.36
2130 2487 2.092429 TCACCCATACTTGCTTGGATCC 60.092 50.000 4.20 4.20 34.81 3.36
2131 2488 1.922447 ACCCATACTTGCTTGGATCCA 59.078 47.619 11.44 11.44 34.81 3.41
2132 2489 2.311542 ACCCATACTTGCTTGGATCCAA 59.688 45.455 25.53 25.53 34.81 3.53
2133 2490 3.245586 ACCCATACTTGCTTGGATCCAAA 60.246 43.478 26.87 11.64 35.33 3.28
2134 2491 3.131046 CCCATACTTGCTTGGATCCAAAC 59.869 47.826 26.87 22.91 35.33 2.93
2135 2492 3.131046 CCATACTTGCTTGGATCCAAACC 59.869 47.826 26.87 20.16 35.33 3.27
2136 2493 1.632589 ACTTGCTTGGATCCAAACCC 58.367 50.000 26.87 17.89 35.33 4.11
2137 2494 1.147817 ACTTGCTTGGATCCAAACCCT 59.852 47.619 26.87 7.03 35.33 4.34
2138 2495 1.821136 CTTGCTTGGATCCAAACCCTC 59.179 52.381 26.87 14.03 35.33 4.30
2139 2496 0.039618 TGCTTGGATCCAAACCCTCC 59.960 55.000 26.87 11.91 35.33 4.30
2140 2497 0.039618 GCTTGGATCCAAACCCTCCA 59.960 55.000 26.87 3.43 37.29 3.86
2141 2498 1.549950 GCTTGGATCCAAACCCTCCAA 60.550 52.381 26.87 3.53 44.64 3.53
2142 2499 2.889756 GCTTGGATCCAAACCCTCCAAT 60.890 50.000 26.87 0.00 45.43 3.16
2143 2500 2.826674 TGGATCCAAACCCTCCAATC 57.173 50.000 13.46 0.00 36.15 2.67
2144 2501 1.287739 TGGATCCAAACCCTCCAATCC 59.712 52.381 13.46 0.00 36.15 3.01
2145 2502 1.287739 GGATCCAAACCCTCCAATCCA 59.712 52.381 6.95 0.00 34.20 3.41
2146 2503 2.659428 GATCCAAACCCTCCAATCCAG 58.341 52.381 0.00 0.00 0.00 3.86
2147 2504 1.753903 TCCAAACCCTCCAATCCAGA 58.246 50.000 0.00 0.00 0.00 3.86
2148 2505 2.069775 TCCAAACCCTCCAATCCAGAA 58.930 47.619 0.00 0.00 0.00 3.02
2149 2506 2.171003 CCAAACCCTCCAATCCAGAAC 58.829 52.381 0.00 0.00 0.00 3.01
2150 2507 2.225117 CCAAACCCTCCAATCCAGAACT 60.225 50.000 0.00 0.00 0.00 3.01
2151 2508 3.010138 CCAAACCCTCCAATCCAGAACTA 59.990 47.826 0.00 0.00 0.00 2.24
2152 2509 4.508405 CCAAACCCTCCAATCCAGAACTAA 60.508 45.833 0.00 0.00 0.00 2.24
2153 2510 4.576330 AACCCTCCAATCCAGAACTAAG 57.424 45.455 0.00 0.00 0.00 2.18
2154 2511 2.846827 ACCCTCCAATCCAGAACTAAGG 59.153 50.000 0.00 0.00 0.00 2.69
2155 2512 3.115390 CCCTCCAATCCAGAACTAAGGA 58.885 50.000 0.00 0.00 38.50 3.36
2156 2513 3.135530 CCCTCCAATCCAGAACTAAGGAG 59.864 52.174 0.00 0.00 40.58 3.69
2157 2514 4.033709 CCTCCAATCCAGAACTAAGGAGA 58.966 47.826 7.12 0.00 42.87 3.71
2158 2515 4.100808 CCTCCAATCCAGAACTAAGGAGAG 59.899 50.000 7.12 0.00 42.87 3.20
2159 2516 4.033709 TCCAATCCAGAACTAAGGAGAGG 58.966 47.826 0.00 0.00 37.34 3.69
2160 2517 4.033709 CCAATCCAGAACTAAGGAGAGGA 58.966 47.826 0.00 0.00 37.34 3.71
2161 2518 4.471386 CCAATCCAGAACTAAGGAGAGGAA 59.529 45.833 0.00 0.00 37.34 3.36
2162 2519 5.131809 CCAATCCAGAACTAAGGAGAGGAAT 59.868 44.000 0.00 0.00 37.34 3.01
2163 2520 6.353429 CCAATCCAGAACTAAGGAGAGGAATT 60.353 42.308 0.00 0.00 37.34 2.17
2164 2521 7.147479 CCAATCCAGAACTAAGGAGAGGAATTA 60.147 40.741 0.00 0.00 37.34 1.40
2165 2522 7.996758 ATCCAGAACTAAGGAGAGGAATTAA 57.003 36.000 0.00 0.00 37.34 1.40
2166 2523 7.808279 TCCAGAACTAAGGAGAGGAATTAAA 57.192 36.000 0.00 0.00 0.00 1.52
2167 2524 8.393959 TCCAGAACTAAGGAGAGGAATTAAAT 57.606 34.615 0.00 0.00 0.00 1.40
2168 2525 8.267894 TCCAGAACTAAGGAGAGGAATTAAATG 58.732 37.037 0.00 0.00 0.00 2.32
2169 2526 8.267894 CCAGAACTAAGGAGAGGAATTAAATGA 58.732 37.037 0.00 0.00 0.00 2.57
2170 2527 9.323985 CAGAACTAAGGAGAGGAATTAAATGAG 57.676 37.037 0.00 0.00 0.00 2.90
2171 2528 8.490311 AGAACTAAGGAGAGGAATTAAATGAGG 58.510 37.037 0.00 0.00 0.00 3.86
2172 2529 7.996758 ACTAAGGAGAGGAATTAAATGAGGA 57.003 36.000 0.00 0.00 0.00 3.71
2173 2530 8.028652 ACTAAGGAGAGGAATTAAATGAGGAG 57.971 38.462 0.00 0.00 0.00 3.69
2174 2531 7.846823 ACTAAGGAGAGGAATTAAATGAGGAGA 59.153 37.037 0.00 0.00 0.00 3.71
2175 2532 6.745794 AGGAGAGGAATTAAATGAGGAGAG 57.254 41.667 0.00 0.00 0.00 3.20
2176 2533 6.448202 AGGAGAGGAATTAAATGAGGAGAGA 58.552 40.000 0.00 0.00 0.00 3.10
2177 2534 6.554605 AGGAGAGGAATTAAATGAGGAGAGAG 59.445 42.308 0.00 0.00 0.00 3.20
2178 2535 6.553100 GGAGAGGAATTAAATGAGGAGAGAGA 59.447 42.308 0.00 0.00 0.00 3.10
2179 2536 7.255942 GGAGAGGAATTAAATGAGGAGAGAGAG 60.256 44.444 0.00 0.00 0.00 3.20
2180 2537 7.361438 AGAGGAATTAAATGAGGAGAGAGAGA 58.639 38.462 0.00 0.00 0.00 3.10
2181 2538 7.506938 AGAGGAATTAAATGAGGAGAGAGAGAG 59.493 40.741 0.00 0.00 0.00 3.20
2182 2539 6.041979 AGGAATTAAATGAGGAGAGAGAGAGC 59.958 42.308 0.00 0.00 0.00 4.09
2183 2540 6.041979 GGAATTAAATGAGGAGAGAGAGAGCT 59.958 42.308 0.00 0.00 0.00 4.09
2184 2541 7.232534 GGAATTAAATGAGGAGAGAGAGAGCTA 59.767 40.741 0.00 0.00 0.00 3.32
2185 2542 8.546083 AATTAAATGAGGAGAGAGAGAGCTAA 57.454 34.615 0.00 0.00 0.00 3.09
2186 2543 8.725606 ATTAAATGAGGAGAGAGAGAGCTAAT 57.274 34.615 0.00 0.00 0.00 1.73
2187 2544 9.821240 ATTAAATGAGGAGAGAGAGAGCTAATA 57.179 33.333 0.00 0.00 0.00 0.98
2188 2545 7.524717 AAATGAGGAGAGAGAGAGCTAATAC 57.475 40.000 0.00 0.00 0.00 1.89
2189 2546 5.638530 TGAGGAGAGAGAGAGCTAATACA 57.361 43.478 0.00 0.00 0.00 2.29
2190 2547 6.199557 TGAGGAGAGAGAGAGCTAATACAT 57.800 41.667 0.00 0.00 0.00 2.29
2191 2548 7.323052 TGAGGAGAGAGAGAGCTAATACATA 57.677 40.000 0.00 0.00 0.00 2.29
2192 2549 7.927788 TGAGGAGAGAGAGAGCTAATACATAT 58.072 38.462 0.00 0.00 0.00 1.78
2193 2550 8.390143 TGAGGAGAGAGAGAGCTAATACATATT 58.610 37.037 0.00 0.00 0.00 1.28
2194 2551 9.243105 GAGGAGAGAGAGAGCTAATACATATTT 57.757 37.037 0.00 0.00 0.00 1.40
2195 2552 9.600432 AGGAGAGAGAGAGCTAATACATATTTT 57.400 33.333 0.00 0.00 0.00 1.82
2238 2595 9.660180 CTAAAAGATTTTAGCCTCAAGACTAGT 57.340 33.333 11.10 0.00 41.97 2.57
2239 2596 8.554835 AAAAGATTTTAGCCTCAAGACTAGTC 57.445 34.615 15.41 15.41 0.00 2.59
2240 2597 6.228616 AGATTTTAGCCTCAAGACTAGTCC 57.771 41.667 19.38 2.89 0.00 3.85
2241 2598 5.961421 AGATTTTAGCCTCAAGACTAGTCCT 59.039 40.000 19.38 10.36 0.00 3.85
2242 2599 7.126733 AGATTTTAGCCTCAAGACTAGTCCTA 58.873 38.462 19.38 9.39 0.00 2.94
2243 2600 6.777213 TTTTAGCCTCAAGACTAGTCCTAG 57.223 41.667 19.38 13.33 39.04 3.02
2244 2601 2.661718 AGCCTCAAGACTAGTCCTAGC 58.338 52.381 19.38 14.54 36.66 3.42
2245 2602 1.684450 GCCTCAAGACTAGTCCTAGCC 59.316 57.143 19.38 0.89 36.66 3.93
2246 2603 2.688515 GCCTCAAGACTAGTCCTAGCCT 60.689 54.545 19.38 0.00 36.66 4.58
2247 2604 3.219281 CCTCAAGACTAGTCCTAGCCTC 58.781 54.545 19.38 0.00 36.66 4.70
2248 2605 3.117663 CCTCAAGACTAGTCCTAGCCTCT 60.118 52.174 19.38 0.00 36.66 3.69
2249 2606 4.134563 CTCAAGACTAGTCCTAGCCTCTC 58.865 52.174 19.38 0.00 36.66 3.20
2250 2607 3.783642 TCAAGACTAGTCCTAGCCTCTCT 59.216 47.826 19.38 0.00 36.66 3.10
2251 2608 4.228666 TCAAGACTAGTCCTAGCCTCTCTT 59.771 45.833 19.38 0.17 36.66 2.85
2252 2609 4.873724 AGACTAGTCCTAGCCTCTCTTT 57.126 45.455 19.38 0.00 36.66 2.52
2253 2610 5.979656 AGACTAGTCCTAGCCTCTCTTTA 57.020 43.478 19.38 0.00 36.66 1.85
2254 2611 5.937111 AGACTAGTCCTAGCCTCTCTTTAG 58.063 45.833 19.38 0.00 36.66 1.85
2255 2612 5.430745 AGACTAGTCCTAGCCTCTCTTTAGT 59.569 44.000 19.38 0.00 36.66 2.24
2256 2613 5.687780 ACTAGTCCTAGCCTCTCTTTAGTC 58.312 45.833 1.22 0.00 36.66 2.59
2257 2614 4.594675 AGTCCTAGCCTCTCTTTAGTCA 57.405 45.455 0.00 0.00 0.00 3.41
2258 2615 4.532834 AGTCCTAGCCTCTCTTTAGTCAG 58.467 47.826 0.00 0.00 0.00 3.51
2259 2616 3.634910 GTCCTAGCCTCTCTTTAGTCAGG 59.365 52.174 0.00 0.00 0.00 3.86
2260 2617 2.962421 CCTAGCCTCTCTTTAGTCAGGG 59.038 54.545 0.00 0.00 0.00 4.45
2261 2618 1.872773 AGCCTCTCTTTAGTCAGGGG 58.127 55.000 0.00 0.00 0.00 4.79
2262 2619 1.079658 AGCCTCTCTTTAGTCAGGGGT 59.920 52.381 0.00 0.00 0.00 4.95
2263 2620 1.208293 GCCTCTCTTTAGTCAGGGGTG 59.792 57.143 0.00 0.00 0.00 4.61
2264 2621 1.208293 CCTCTCTTTAGTCAGGGGTGC 59.792 57.143 0.00 0.00 0.00 5.01
2265 2622 2.183679 CTCTCTTTAGTCAGGGGTGCT 58.816 52.381 0.00 0.00 0.00 4.40
2266 2623 2.569404 CTCTCTTTAGTCAGGGGTGCTT 59.431 50.000 0.00 0.00 0.00 3.91
2267 2624 2.303022 TCTCTTTAGTCAGGGGTGCTTG 59.697 50.000 0.00 0.00 0.00 4.01
2268 2625 2.303022 CTCTTTAGTCAGGGGTGCTTGA 59.697 50.000 0.00 0.00 0.00 3.02
2269 2626 2.708861 TCTTTAGTCAGGGGTGCTTGAA 59.291 45.455 0.00 0.00 0.00 2.69
2270 2627 3.137544 TCTTTAGTCAGGGGTGCTTGAAA 59.862 43.478 0.00 0.00 0.00 2.69
2271 2628 2.561478 TAGTCAGGGGTGCTTGAAAC 57.439 50.000 0.00 0.00 0.00 2.78
2272 2629 0.846693 AGTCAGGGGTGCTTGAAACT 59.153 50.000 0.00 0.00 0.00 2.66
2273 2630 1.215423 AGTCAGGGGTGCTTGAAACTT 59.785 47.619 0.00 0.00 0.00 2.66
2274 2631 2.031870 GTCAGGGGTGCTTGAAACTTT 58.968 47.619 0.00 0.00 0.00 2.66
2275 2632 3.117663 AGTCAGGGGTGCTTGAAACTTTA 60.118 43.478 0.00 0.00 0.00 1.85
2276 2633 3.253432 GTCAGGGGTGCTTGAAACTTTAG 59.747 47.826 0.00 0.00 0.00 1.85
2277 2634 2.029918 CAGGGGTGCTTGAAACTTTAGC 60.030 50.000 0.00 0.00 35.50 3.09
2278 2635 1.272490 GGGGTGCTTGAAACTTTAGCC 59.728 52.381 0.00 0.00 34.03 3.93
2279 2636 2.239400 GGGTGCTTGAAACTTTAGCCT 58.761 47.619 0.00 0.00 34.03 4.58
2280 2637 2.229062 GGGTGCTTGAAACTTTAGCCTC 59.771 50.000 0.00 0.00 34.03 4.70
2281 2638 2.884639 GGTGCTTGAAACTTTAGCCTCA 59.115 45.455 0.00 0.00 34.03 3.86
2282 2639 3.507622 GGTGCTTGAAACTTTAGCCTCAT 59.492 43.478 0.00 0.00 34.03 2.90
2283 2640 4.021981 GGTGCTTGAAACTTTAGCCTCATT 60.022 41.667 0.00 0.00 34.03 2.57
2284 2641 5.509670 GGTGCTTGAAACTTTAGCCTCATTT 60.510 40.000 0.00 0.00 34.03 2.32
2285 2642 5.985530 GTGCTTGAAACTTTAGCCTCATTTT 59.014 36.000 0.00 0.00 34.03 1.82
2286 2643 6.479990 GTGCTTGAAACTTTAGCCTCATTTTT 59.520 34.615 0.00 0.00 34.03 1.94
2287 2644 7.651704 GTGCTTGAAACTTTAGCCTCATTTTTA 59.348 33.333 0.00 0.00 34.03 1.52
2288 2645 7.867403 TGCTTGAAACTTTAGCCTCATTTTTAG 59.133 33.333 0.00 0.00 34.03 1.85
2289 2646 7.867909 GCTTGAAACTTTAGCCTCATTTTTAGT 59.132 33.333 0.00 0.00 0.00 2.24
2290 2647 9.399403 CTTGAAACTTTAGCCTCATTTTTAGTC 57.601 33.333 0.00 0.00 0.00 2.59
2291 2648 8.458573 TGAAACTTTAGCCTCATTTTTAGTCA 57.541 30.769 0.00 0.00 0.00 3.41
2292 2649 8.567948 TGAAACTTTAGCCTCATTTTTAGTCAG 58.432 33.333 0.00 0.00 0.00 3.51
2293 2650 8.691661 AAACTTTAGCCTCATTTTTAGTCAGA 57.308 30.769 0.00 0.00 0.00 3.27
2294 2651 7.674471 ACTTTAGCCTCATTTTTAGTCAGAC 57.326 36.000 0.00 0.00 0.00 3.51
2295 2652 7.454225 ACTTTAGCCTCATTTTTAGTCAGACT 58.546 34.615 8.50 8.50 0.00 3.24
2296 2653 7.604545 ACTTTAGCCTCATTTTTAGTCAGACTC 59.395 37.037 6.27 0.00 0.00 3.36
2297 2654 4.837972 AGCCTCATTTTTAGTCAGACTCC 58.162 43.478 6.27 0.00 0.00 3.85
2298 2655 4.534103 AGCCTCATTTTTAGTCAGACTCCT 59.466 41.667 6.27 0.00 0.00 3.69
2299 2656 5.013599 AGCCTCATTTTTAGTCAGACTCCTT 59.986 40.000 6.27 0.00 0.00 3.36
2300 2657 5.707764 GCCTCATTTTTAGTCAGACTCCTTT 59.292 40.000 6.27 0.00 0.00 3.11
2301 2658 6.879458 GCCTCATTTTTAGTCAGACTCCTTTA 59.121 38.462 6.27 0.00 0.00 1.85
2302 2659 7.554476 GCCTCATTTTTAGTCAGACTCCTTTAT 59.446 37.037 6.27 0.00 0.00 1.40
2309 2666 9.601217 TTTTAGTCAGACTCCTTTATATCAAGC 57.399 33.333 6.27 0.00 0.00 4.01
2310 2667 6.798427 AGTCAGACTCCTTTATATCAAGCA 57.202 37.500 0.00 0.00 0.00 3.91
2311 2668 6.578023 AGTCAGACTCCTTTATATCAAGCAC 58.422 40.000 0.00 0.00 0.00 4.40
2312 2669 5.755861 GTCAGACTCCTTTATATCAAGCACC 59.244 44.000 0.00 0.00 0.00 5.01
2313 2670 5.059833 CAGACTCCTTTATATCAAGCACCC 58.940 45.833 0.00 0.00 0.00 4.61
2314 2671 4.971924 AGACTCCTTTATATCAAGCACCCT 59.028 41.667 0.00 0.00 0.00 4.34
2315 2672 5.430089 AGACTCCTTTATATCAAGCACCCTT 59.570 40.000 0.00 0.00 0.00 3.95
2316 2673 6.069381 AGACTCCTTTATATCAAGCACCCTTT 60.069 38.462 0.00 0.00 0.00 3.11
2317 2674 6.494059 ACTCCTTTATATCAAGCACCCTTTT 58.506 36.000 0.00 0.00 0.00 2.27
2318 2675 7.639378 ACTCCTTTATATCAAGCACCCTTTTA 58.361 34.615 0.00 0.00 0.00 1.52
2366 2723 3.138798 GCCGCTCCGTCTCCTGTA 61.139 66.667 0.00 0.00 0.00 2.74
2399 2756 2.125912 ATCTCTGCGACACGGCAC 60.126 61.111 0.00 0.00 38.17 5.01
2439 2796 1.134877 CACGTCTCACTCTGCATGGAT 60.135 52.381 0.00 0.00 0.00 3.41
2440 2797 1.134877 ACGTCTCACTCTGCATGGATG 60.135 52.381 0.00 0.00 0.00 3.51
2465 2822 2.183046 GCTCGACTGACCTGAGGC 59.817 66.667 0.00 0.00 0.00 4.70
2466 2823 2.347322 GCTCGACTGACCTGAGGCT 61.347 63.158 0.00 0.00 0.00 4.58
2467 2824 1.510383 CTCGACTGACCTGAGGCTG 59.490 63.158 0.00 0.00 0.00 4.85
2468 2825 0.962855 CTCGACTGACCTGAGGCTGA 60.963 60.000 0.00 0.00 0.00 4.26
2469 2826 0.539669 TCGACTGACCTGAGGCTGAA 60.540 55.000 0.00 0.00 0.00 3.02
2502 2859 4.929808 AGTAATTGAGCTGGAAGTAACGTG 59.070 41.667 0.00 0.00 35.30 4.49
2574 2931 0.882042 CCTTCACACGCTGACAGCTT 60.882 55.000 24.36 13.45 39.60 3.74
2655 3014 0.962489 AGAGACAAGTGTGGACGAGG 59.038 55.000 0.00 0.00 0.00 4.63
2665 3024 0.253610 GTGGACGAGGGAGAGAGAGA 59.746 60.000 0.00 0.00 0.00 3.10
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
5 6 6.753180 TCTCCTGATGACATAAGTATGAAGC 58.247 40.000 5.33 0.00 37.15 3.86
42 43 9.760660 GTATCATCAAATTACGATTCCATAAGC 57.239 33.333 0.00 0.00 0.00 3.09
52 53 9.934190 CAACAATCATGTATCATCAAATTACGA 57.066 29.630 0.00 0.00 39.40 3.43
53 54 9.934190 TCAACAATCATGTATCATCAAATTACG 57.066 29.630 0.00 0.00 39.40 3.18
59 60 8.564509 TGTTCTCAACAATCATGTATCATCAA 57.435 30.769 0.00 0.00 39.40 2.57
63 64 9.844790 GAAAATGTTCTCAACAATCATGTATCA 57.155 29.630 0.00 0.00 45.86 2.15
91 92 1.070786 TTCGGGAAGCACTTTCGCT 59.929 52.632 0.00 0.00 46.67 4.93
92 93 1.206831 GTTCGGGAAGCACTTTCGC 59.793 57.895 0.00 0.00 43.31 4.70
93 94 1.156736 ATGTTCGGGAAGCACTTTCG 58.843 50.000 0.00 2.15 36.62 3.46
94 95 2.412847 CGAATGTTCGGGAAGCACTTTC 60.413 50.000 7.24 0.00 46.30 2.62
97 98 2.840974 CGAATGTTCGGGAAGCACT 58.159 52.632 7.24 0.00 46.30 4.40
104 105 9.627765 ACAATGTTGTATTGACGAATGTTCGGG 62.628 40.741 18.12 0.00 46.46 5.14
114 115 7.904977 CCTTTCATCTACAATGTTGTATTGACG 59.095 37.037 13.67 10.04 42.26 4.35
133 134 5.806654 AAGCCAATGTTGTAACCTTTCAT 57.193 34.783 0.00 0.00 0.00 2.57
137 138 6.097696 ACAAACTAAGCCAATGTTGTAACCTT 59.902 34.615 0.00 0.00 0.00 3.50
138 139 5.596772 ACAAACTAAGCCAATGTTGTAACCT 59.403 36.000 0.00 0.00 0.00 3.50
139 140 5.838529 ACAAACTAAGCCAATGTTGTAACC 58.161 37.500 0.00 0.00 0.00 2.85
140 141 6.500041 TGACAAACTAAGCCAATGTTGTAAC 58.500 36.000 0.00 0.00 0.00 2.50
141 142 6.701145 TGACAAACTAAGCCAATGTTGTAA 57.299 33.333 0.00 0.00 0.00 2.41
142 143 6.320164 AGTTGACAAACTAAGCCAATGTTGTA 59.680 34.615 0.00 0.00 45.01 2.41
143 144 5.127031 AGTTGACAAACTAAGCCAATGTTGT 59.873 36.000 0.00 0.00 45.01 3.32
144 145 5.591099 AGTTGACAAACTAAGCCAATGTTG 58.409 37.500 0.00 0.00 45.01 3.33
145 146 5.852282 AGTTGACAAACTAAGCCAATGTT 57.148 34.783 0.00 0.00 45.01 2.71
146 147 5.852282 AAGTTGACAAACTAAGCCAATGT 57.148 34.783 0.00 0.00 46.15 2.71
147 148 7.199766 TGTTAAGTTGACAAACTAAGCCAATG 58.800 34.615 0.00 0.00 46.15 2.82
148 149 7.341445 TGTTAAGTTGACAAACTAAGCCAAT 57.659 32.000 0.00 0.00 46.15 3.16
149 150 6.761099 TGTTAAGTTGACAAACTAAGCCAA 57.239 33.333 0.00 0.00 46.15 4.52
150 151 6.404954 GGTTGTTAAGTTGACAAACTAAGCCA 60.405 38.462 18.54 0.00 46.15 4.75
166 167 1.950909 TCACGGGCTTTGGTTGTTAAG 59.049 47.619 0.00 0.00 0.00 1.85
168 169 1.950909 CTTCACGGGCTTTGGTTGTTA 59.049 47.619 0.00 0.00 0.00 2.41
171 176 0.821711 TCCTTCACGGGCTTTGGTTG 60.822 55.000 0.00 0.00 0.00 3.77
185 190 5.106197 TGTGCAATTATCATGTGTGTCCTTC 60.106 40.000 0.00 0.00 0.00 3.46
190 195 6.519679 AAGATGTGCAATTATCATGTGTGT 57.480 33.333 8.89 0.00 0.00 3.72
280 285 9.778741 GAGGGAGTATTGTGATGATTATGTTTA 57.221 33.333 0.00 0.00 0.00 2.01
283 288 6.519043 CGGAGGGAGTATTGTGATGATTATGT 60.519 42.308 0.00 0.00 0.00 2.29
284 289 5.871524 CGGAGGGAGTATTGTGATGATTATG 59.128 44.000 0.00 0.00 0.00 1.90
285 290 5.544176 ACGGAGGGAGTATTGTGATGATTAT 59.456 40.000 0.00 0.00 0.00 1.28
286 291 4.899457 ACGGAGGGAGTATTGTGATGATTA 59.101 41.667 0.00 0.00 0.00 1.75
289 294 2.430694 CACGGAGGGAGTATTGTGATGA 59.569 50.000 0.00 0.00 0.00 2.92
298 303 6.722590 TCTTATATTAATGCACGGAGGGAGTA 59.277 38.462 0.00 0.00 0.00 2.59
300 305 6.037786 TCTTATATTAATGCACGGAGGGAG 57.962 41.667 0.00 0.00 0.00 4.30
302 307 6.231211 AGTTCTTATATTAATGCACGGAGGG 58.769 40.000 0.00 0.00 0.00 4.30
303 308 7.730364 AAGTTCTTATATTAATGCACGGAGG 57.270 36.000 0.00 0.00 0.00 4.30
394 399 8.943909 AGCTTTTACTTAATTCGTATGTAGCT 57.056 30.769 0.00 0.00 0.00 3.32
421 426 9.791781 TCCCATTTTCCCTAATATAAAACCTTT 57.208 29.630 0.00 0.00 0.00 3.11
422 427 9.434275 CTCCCATTTTCCCTAATATAAAACCTT 57.566 33.333 0.00 0.00 0.00 3.50
423 428 8.574853 ACTCCCATTTTCCCTAATATAAAACCT 58.425 33.333 0.00 0.00 0.00 3.50
424 429 8.777578 ACTCCCATTTTCCCTAATATAAAACC 57.222 34.615 0.00 0.00 0.00 3.27
429 434 9.455144 TCAACTACTCCCATTTTCCCTAATATA 57.545 33.333 0.00 0.00 0.00 0.86
430 435 8.218488 GTCAACTACTCCCATTTTCCCTAATAT 58.782 37.037 0.00 0.00 0.00 1.28
431 436 7.183112 TGTCAACTACTCCCATTTTCCCTAATA 59.817 37.037 0.00 0.00 0.00 0.98
432 437 6.011981 TGTCAACTACTCCCATTTTCCCTAAT 60.012 38.462 0.00 0.00 0.00 1.73
433 438 5.311121 TGTCAACTACTCCCATTTTCCCTAA 59.689 40.000 0.00 0.00 0.00 2.69
434 439 4.847512 TGTCAACTACTCCCATTTTCCCTA 59.152 41.667 0.00 0.00 0.00 3.53
435 440 3.655777 TGTCAACTACTCCCATTTTCCCT 59.344 43.478 0.00 0.00 0.00 4.20
436 441 4.028993 TGTCAACTACTCCCATTTTCCC 57.971 45.455 0.00 0.00 0.00 3.97
437 442 5.181433 GTCTTGTCAACTACTCCCATTTTCC 59.819 44.000 0.00 0.00 0.00 3.13
438 443 5.763204 TGTCTTGTCAACTACTCCCATTTTC 59.237 40.000 0.00 0.00 0.00 2.29
439 444 5.690865 TGTCTTGTCAACTACTCCCATTTT 58.309 37.500 0.00 0.00 0.00 1.82
440 445 5.304686 TGTCTTGTCAACTACTCCCATTT 57.695 39.130 0.00 0.00 0.00 2.32
441 446 4.974645 TGTCTTGTCAACTACTCCCATT 57.025 40.909 0.00 0.00 0.00 3.16
442 447 4.532126 TCATGTCTTGTCAACTACTCCCAT 59.468 41.667 0.00 0.00 0.00 4.00
443 448 3.901222 TCATGTCTTGTCAACTACTCCCA 59.099 43.478 0.00 0.00 0.00 4.37
444 449 4.537135 TCATGTCTTGTCAACTACTCCC 57.463 45.455 0.00 0.00 0.00 4.30
445 450 7.819900 ACTTTATCATGTCTTGTCAACTACTCC 59.180 37.037 0.00 0.00 0.00 3.85
446 451 8.764524 ACTTTATCATGTCTTGTCAACTACTC 57.235 34.615 0.00 0.00 0.00 2.59
493 498 7.390440 TCAACGATGAGTGTATGGATTCTTTTT 59.610 33.333 0.00 0.00 0.00 1.94
498 503 6.662414 TTTCAACGATGAGTGTATGGATTC 57.338 37.500 0.00 0.00 36.78 2.52
571 901 2.170397 TCATTTCCATTCTAGCCTCGCA 59.830 45.455 0.00 0.00 0.00 5.10
573 903 3.134458 GGTCATTTCCATTCTAGCCTCG 58.866 50.000 0.00 0.00 0.00 4.63
576 906 2.620585 GCTGGTCATTTCCATTCTAGCC 59.379 50.000 0.00 0.00 36.84 3.93
578 908 5.416952 AGTTTGCTGGTCATTTCCATTCTAG 59.583 40.000 0.00 0.00 36.84 2.43
579 909 5.324409 AGTTTGCTGGTCATTTCCATTCTA 58.676 37.500 0.00 0.00 36.84 2.10
581 911 4.525912 AGTTTGCTGGTCATTTCCATTC 57.474 40.909 0.00 0.00 36.84 2.67
583 913 4.463891 CCTTAGTTTGCTGGTCATTTCCAT 59.536 41.667 0.00 0.00 36.84 3.41
585 915 3.193479 CCCTTAGTTTGCTGGTCATTTCC 59.807 47.826 0.00 0.00 0.00 3.13
589 919 4.526970 CATACCCTTAGTTTGCTGGTCAT 58.473 43.478 0.00 0.00 0.00 3.06
590 920 3.308117 CCATACCCTTAGTTTGCTGGTCA 60.308 47.826 0.00 0.00 0.00 4.02
592 922 2.620627 GCCATACCCTTAGTTTGCTGGT 60.621 50.000 0.00 0.00 0.00 4.00
593 923 2.024414 GCCATACCCTTAGTTTGCTGG 58.976 52.381 0.00 0.00 0.00 4.85
595 925 3.089284 GTTGCCATACCCTTAGTTTGCT 58.911 45.455 0.00 0.00 0.00 3.91
596 926 2.159435 CGTTGCCATACCCTTAGTTTGC 60.159 50.000 0.00 0.00 0.00 3.68
597 927 2.159435 GCGTTGCCATACCCTTAGTTTG 60.159 50.000 0.00 0.00 0.00 2.93
598 928 2.089201 GCGTTGCCATACCCTTAGTTT 58.911 47.619 0.00 0.00 0.00 2.66
599 929 1.003812 TGCGTTGCCATACCCTTAGTT 59.996 47.619 0.00 0.00 0.00 2.24
600 930 0.616371 TGCGTTGCCATACCCTTAGT 59.384 50.000 0.00 0.00 0.00 2.24
601 931 1.745232 TTGCGTTGCCATACCCTTAG 58.255 50.000 0.00 0.00 0.00 2.18
602 932 2.088423 CTTTGCGTTGCCATACCCTTA 58.912 47.619 0.00 0.00 0.00 2.69
603 933 0.887933 CTTTGCGTTGCCATACCCTT 59.112 50.000 0.00 0.00 0.00 3.95
604 934 0.251165 ACTTTGCGTTGCCATACCCT 60.251 50.000 0.00 0.00 0.00 4.34
605 935 1.131693 GTACTTTGCGTTGCCATACCC 59.868 52.381 0.00 0.00 0.00 3.69
606 936 1.807742 TGTACTTTGCGTTGCCATACC 59.192 47.619 0.00 0.00 0.00 2.73
607 937 3.486875 GGATGTACTTTGCGTTGCCATAC 60.487 47.826 0.00 0.00 0.00 2.39
608 938 2.680841 GGATGTACTTTGCGTTGCCATA 59.319 45.455 0.00 0.00 0.00 2.74
609 939 1.472480 GGATGTACTTTGCGTTGCCAT 59.528 47.619 0.00 0.00 0.00 4.40
610 940 0.878416 GGATGTACTTTGCGTTGCCA 59.122 50.000 0.00 0.00 0.00 4.92
611 941 0.179200 CGGATGTACTTTGCGTTGCC 60.179 55.000 0.00 0.00 0.00 4.52
612 942 0.515564 ACGGATGTACTTTGCGTTGC 59.484 50.000 9.42 0.00 37.96 4.17
613 943 2.961522 AACGGATGTACTTTGCGTTG 57.038 45.000 21.06 0.00 46.96 4.10
615 945 1.435577 GGAACGGATGTACTTTGCGT 58.564 50.000 9.42 9.42 43.19 5.24
616 946 0.725117 GGGAACGGATGTACTTTGCG 59.275 55.000 8.31 8.31 0.00 4.85
617 947 1.737793 CAGGGAACGGATGTACTTTGC 59.262 52.381 0.00 0.00 0.00 3.68
618 948 2.356135 CCAGGGAACGGATGTACTTTG 58.644 52.381 0.00 0.00 0.00 2.77
619 949 1.339727 GCCAGGGAACGGATGTACTTT 60.340 52.381 0.00 0.00 0.00 2.66
620 950 0.252197 GCCAGGGAACGGATGTACTT 59.748 55.000 0.00 0.00 0.00 2.24
621 951 0.907704 TGCCAGGGAACGGATGTACT 60.908 55.000 0.00 0.00 0.00 2.73
622 952 0.180406 ATGCCAGGGAACGGATGTAC 59.820 55.000 0.00 0.00 0.00 2.90
623 953 0.468226 GATGCCAGGGAACGGATGTA 59.532 55.000 0.00 0.00 0.00 2.29
624 954 1.224592 GATGCCAGGGAACGGATGT 59.775 57.895 0.00 0.00 0.00 3.06
625 955 1.526917 GGATGCCAGGGAACGGATG 60.527 63.158 0.00 0.00 0.00 3.51
626 956 2.000701 TGGATGCCAGGGAACGGAT 61.001 57.895 0.00 0.00 0.00 4.18
627 957 2.609299 TGGATGCCAGGGAACGGA 60.609 61.111 0.00 0.00 0.00 4.69
644 974 7.280652 AGAGTTTAAATTTGCACAATGTTTGCT 59.719 29.630 0.00 0.00 40.86 3.91
648 978 6.018016 GCCAGAGTTTAAATTTGCACAATGTT 60.018 34.615 0.00 0.00 0.00 2.71
660 990 1.834188 CCCACCGCCAGAGTTTAAAT 58.166 50.000 0.00 0.00 0.00 1.40
663 993 0.905809 TAGCCCACCGCCAGAGTTTA 60.906 55.000 0.00 0.00 38.78 2.01
749 1079 4.838486 CTGTCCTCGCGTCGCCTC 62.838 72.222 12.44 0.00 0.00 4.70
752 1082 3.891586 TTGACTGTCCTCGCGTCGC 62.892 63.158 7.29 7.29 0.00 5.19
753 1083 1.371267 TTTGACTGTCCTCGCGTCG 60.371 57.895 5.77 0.00 0.00 5.12
754 1084 1.282930 GGTTTGACTGTCCTCGCGTC 61.283 60.000 5.77 0.00 0.00 5.19
755 1085 1.300697 GGTTTGACTGTCCTCGCGT 60.301 57.895 5.77 0.00 0.00 6.01
756 1086 2.372690 CGGTTTGACTGTCCTCGCG 61.373 63.158 0.00 0.00 0.00 5.87
757 1087 2.668280 GCGGTTTGACTGTCCTCGC 61.668 63.158 5.17 11.04 35.12 5.03
758 1088 1.006102 AGCGGTTTGACTGTCCTCG 60.006 57.895 5.17 5.27 0.00 4.63
868 1198 2.304761 GGGACGGGCATTTATAGATGGA 59.695 50.000 5.48 0.00 0.00 3.41
886 1216 1.152312 GATAAGGCGAGGAGGGGGA 60.152 63.158 0.00 0.00 0.00 4.81
953 1288 4.408694 GTGCGCGTATCTTTTTGGTTATT 58.591 39.130 8.43 0.00 0.00 1.40
1122 1457 4.825252 GCGGCGTAACGTCCCCAT 62.825 66.667 9.37 0.00 35.98 4.00
1173 1508 2.055310 TATCGTACGTGCCGAGCCAG 62.055 60.000 16.05 0.00 37.81 4.85
1260 1595 1.273327 GACGAAGGGAACGGGAAGTTA 59.727 52.381 0.00 0.00 44.35 2.24
1324 1671 1.002544 GCTAGAGTCCAAGGTGCTGTT 59.997 52.381 0.00 0.00 0.00 3.16
1506 1853 1.629043 AGAAGAAGTACGGGTGCAGA 58.371 50.000 0.00 0.00 0.00 4.26
1611 1961 2.766400 GGAGTCGGAGTCGCTCTGG 61.766 68.421 13.43 4.72 37.46 3.86
1687 2037 3.254060 CGTTCAGATCCAGATCAAACGT 58.746 45.455 24.91 0.00 44.65 3.99
1722 2072 4.618920 TTTGTCCTTTGTCTAGTCCTCC 57.381 45.455 0.00 0.00 0.00 4.30
1837 2193 1.679305 GGCTCCTCGGTCTGTCTCA 60.679 63.158 0.00 0.00 0.00 3.27
1956 2313 9.077885 TCATGCTACACTCATCTTACACATATA 57.922 33.333 0.00 0.00 0.00 0.86
1957 2314 7.955918 TCATGCTACACTCATCTTACACATAT 58.044 34.615 0.00 0.00 0.00 1.78
1958 2315 7.346751 TCATGCTACACTCATCTTACACATA 57.653 36.000 0.00 0.00 0.00 2.29
2008 2365 9.958180 TTCTGAACACAAAAGATGGAATAGATA 57.042 29.630 0.00 0.00 0.00 1.98
2047 2404 3.764885 AAAACGTATCCAAGCATGCTC 57.235 42.857 22.93 6.18 0.00 4.26
2048 2405 4.261801 ACTAAAACGTATCCAAGCATGCT 58.738 39.130 16.30 16.30 0.00 3.79
2049 2406 4.495844 GGACTAAAACGTATCCAAGCATGC 60.496 45.833 10.51 10.51 0.00 4.06
2050 2407 4.035208 GGGACTAAAACGTATCCAAGCATG 59.965 45.833 0.00 0.00 32.45 4.06
2051 2408 4.196971 GGGACTAAAACGTATCCAAGCAT 58.803 43.478 0.00 0.00 32.45 3.79
2052 2409 3.008157 TGGGACTAAAACGTATCCAAGCA 59.992 43.478 0.00 0.00 32.45 3.91
2053 2410 3.602483 TGGGACTAAAACGTATCCAAGC 58.398 45.455 0.00 0.00 32.45 4.01
2054 2411 5.293569 GTCATGGGACTAAAACGTATCCAAG 59.706 44.000 0.00 0.00 40.99 3.61
2055 2412 5.180271 GTCATGGGACTAAAACGTATCCAA 58.820 41.667 0.00 0.00 40.99 3.53
2056 2413 4.761975 GTCATGGGACTAAAACGTATCCA 58.238 43.478 0.00 0.00 40.99 3.41
2071 2428 4.225267 AGTCCCACTACTTTTAGTCATGGG 59.775 45.833 16.70 16.70 46.94 4.00
2072 2429 5.422214 AGTCCCACTACTTTTAGTCATGG 57.578 43.478 0.00 0.00 36.31 3.66
2073 2430 8.718734 GTTTTAGTCCCACTACTTTTAGTCATG 58.281 37.037 0.00 0.00 36.31 3.07
2074 2431 8.657712 AGTTTTAGTCCCACTACTTTTAGTCAT 58.342 33.333 0.00 0.00 36.31 3.06
2075 2432 8.026396 AGTTTTAGTCCCACTACTTTTAGTCA 57.974 34.615 0.00 0.00 36.31 3.41
2076 2433 8.771766 CAAGTTTTAGTCCCACTACTTTTAGTC 58.228 37.037 0.00 0.00 36.31 2.59
2077 2434 7.228108 GCAAGTTTTAGTCCCACTACTTTTAGT 59.772 37.037 0.00 0.00 39.30 2.24
2078 2435 7.444487 AGCAAGTTTTAGTCCCACTACTTTTAG 59.556 37.037 0.00 0.00 28.93 1.85
2079 2436 7.284820 AGCAAGTTTTAGTCCCACTACTTTTA 58.715 34.615 0.00 0.00 28.93 1.52
2080 2437 6.127101 AGCAAGTTTTAGTCCCACTACTTTT 58.873 36.000 0.00 0.00 28.93 2.27
2081 2438 5.691896 AGCAAGTTTTAGTCCCACTACTTT 58.308 37.500 0.00 0.00 28.93 2.66
2082 2439 5.306114 AGCAAGTTTTAGTCCCACTACTT 57.694 39.130 0.00 0.00 28.93 2.24
2083 2440 4.976540 AGCAAGTTTTAGTCCCACTACT 57.023 40.909 0.00 0.00 28.93 2.57
2084 2441 5.791666 ACTAGCAAGTTTTAGTCCCACTAC 58.208 41.667 0.00 0.00 27.15 2.73
2085 2442 5.778750 AGACTAGCAAGTTTTAGTCCCACTA 59.221 40.000 15.72 0.00 44.32 2.74
2086 2443 4.593634 AGACTAGCAAGTTTTAGTCCCACT 59.406 41.667 15.72 1.62 44.32 4.00
2087 2444 4.895961 AGACTAGCAAGTTTTAGTCCCAC 58.104 43.478 15.72 0.00 44.32 4.61
2088 2445 4.591498 TGAGACTAGCAAGTTTTAGTCCCA 59.409 41.667 15.72 10.61 44.32 4.37
2089 2446 4.930405 GTGAGACTAGCAAGTTTTAGTCCC 59.070 45.833 15.72 8.76 44.32 4.46
2090 2447 4.930405 GGTGAGACTAGCAAGTTTTAGTCC 59.070 45.833 15.72 10.59 44.32 3.85
2091 2448 4.930405 GGGTGAGACTAGCAAGTTTTAGTC 59.070 45.833 13.08 13.08 43.83 2.59
2092 2449 4.347000 TGGGTGAGACTAGCAAGTTTTAGT 59.653 41.667 0.00 0.00 35.56 2.24
2093 2450 4.894784 TGGGTGAGACTAGCAAGTTTTAG 58.105 43.478 0.00 0.00 35.56 1.85
2094 2451 4.967084 TGGGTGAGACTAGCAAGTTTTA 57.033 40.909 0.00 0.00 35.56 1.52
2095 2452 3.857157 TGGGTGAGACTAGCAAGTTTT 57.143 42.857 0.00 0.00 35.56 2.43
2096 2453 4.532521 AGTATGGGTGAGACTAGCAAGTTT 59.467 41.667 0.00 0.00 35.56 2.66
2097 2454 4.097418 AGTATGGGTGAGACTAGCAAGTT 58.903 43.478 0.00 0.00 35.56 2.66
2098 2455 3.714144 AGTATGGGTGAGACTAGCAAGT 58.286 45.455 0.00 0.00 39.21 3.16
2099 2456 4.437239 CAAGTATGGGTGAGACTAGCAAG 58.563 47.826 0.00 0.00 0.00 4.01
2100 2457 3.369471 GCAAGTATGGGTGAGACTAGCAA 60.369 47.826 0.00 0.00 0.00 3.91
2101 2458 2.168521 GCAAGTATGGGTGAGACTAGCA 59.831 50.000 0.00 0.00 0.00 3.49
2102 2459 2.432510 AGCAAGTATGGGTGAGACTAGC 59.567 50.000 0.00 0.00 0.00 3.42
2103 2460 4.437239 CAAGCAAGTATGGGTGAGACTAG 58.563 47.826 0.00 0.00 0.00 2.57
2104 2461 3.197766 CCAAGCAAGTATGGGTGAGACTA 59.802 47.826 0.00 0.00 32.87 2.59
2105 2462 2.026822 CCAAGCAAGTATGGGTGAGACT 60.027 50.000 0.00 0.00 32.87 3.24
2106 2463 2.027192 TCCAAGCAAGTATGGGTGAGAC 60.027 50.000 0.00 0.00 37.31 3.36
2107 2464 2.265367 TCCAAGCAAGTATGGGTGAGA 58.735 47.619 0.00 0.00 37.31 3.27
2108 2465 2.787473 TCCAAGCAAGTATGGGTGAG 57.213 50.000 0.00 0.00 37.31 3.51
2109 2466 2.092429 GGATCCAAGCAAGTATGGGTGA 60.092 50.000 6.95 0.00 37.31 4.02
2110 2467 2.301346 GGATCCAAGCAAGTATGGGTG 58.699 52.381 6.95 0.00 37.31 4.61
2111 2468 1.922447 TGGATCCAAGCAAGTATGGGT 59.078 47.619 13.46 0.00 37.31 4.51
2112 2469 2.734755 TGGATCCAAGCAAGTATGGG 57.265 50.000 13.46 0.00 37.31 4.00
2113 2470 3.131046 GGTTTGGATCCAAGCAAGTATGG 59.869 47.826 33.84 0.00 38.60 2.74
2114 2471 3.131046 GGGTTTGGATCCAAGCAAGTATG 59.869 47.826 33.84 0.00 38.60 2.39
2115 2472 3.011708 AGGGTTTGGATCCAAGCAAGTAT 59.988 43.478 33.84 16.77 38.60 2.12
2116 2473 2.378547 AGGGTTTGGATCCAAGCAAGTA 59.621 45.455 33.84 15.53 38.60 2.24
2117 2474 1.147817 AGGGTTTGGATCCAAGCAAGT 59.852 47.619 33.84 19.40 38.60 3.16
2118 2475 1.821136 GAGGGTTTGGATCCAAGCAAG 59.179 52.381 33.84 0.00 38.60 4.01
2119 2476 1.549950 GGAGGGTTTGGATCCAAGCAA 60.550 52.381 33.84 16.90 38.60 3.91
2120 2477 0.039618 GGAGGGTTTGGATCCAAGCA 59.960 55.000 33.84 17.59 38.60 3.91
2121 2478 0.039618 TGGAGGGTTTGGATCCAAGC 59.960 55.000 28.05 28.05 40.13 4.01
2122 2479 2.603075 TTGGAGGGTTTGGATCCAAG 57.397 50.000 25.69 0.00 45.76 3.61
2124 2481 1.287739 GGATTGGAGGGTTTGGATCCA 59.712 52.381 11.44 11.44 41.33 3.41
2125 2482 1.287739 TGGATTGGAGGGTTTGGATCC 59.712 52.381 4.20 4.20 34.91 3.36
2126 2483 2.242196 TCTGGATTGGAGGGTTTGGATC 59.758 50.000 0.00 0.00 0.00 3.36
2127 2484 2.287584 TCTGGATTGGAGGGTTTGGAT 58.712 47.619 0.00 0.00 0.00 3.41
2128 2485 1.753903 TCTGGATTGGAGGGTTTGGA 58.246 50.000 0.00 0.00 0.00 3.53
2129 2486 2.171003 GTTCTGGATTGGAGGGTTTGG 58.829 52.381 0.00 0.00 0.00 3.28
2130 2487 3.160679 AGTTCTGGATTGGAGGGTTTG 57.839 47.619 0.00 0.00 0.00 2.93
2131 2488 4.263949 CCTTAGTTCTGGATTGGAGGGTTT 60.264 45.833 0.00 0.00 0.00 3.27
2132 2489 3.267031 CCTTAGTTCTGGATTGGAGGGTT 59.733 47.826 0.00 0.00 0.00 4.11
2133 2490 2.846827 CCTTAGTTCTGGATTGGAGGGT 59.153 50.000 0.00 0.00 0.00 4.34
2134 2491 3.115390 TCCTTAGTTCTGGATTGGAGGG 58.885 50.000 0.00 0.00 0.00 4.30
2135 2492 4.033709 TCTCCTTAGTTCTGGATTGGAGG 58.966 47.826 0.00 0.00 39.80 4.30
2136 2493 4.100808 CCTCTCCTTAGTTCTGGATTGGAG 59.899 50.000 0.00 0.00 40.47 3.86
2137 2494 4.033709 CCTCTCCTTAGTTCTGGATTGGA 58.966 47.826 0.00 0.00 31.05 3.53
2138 2495 4.033709 TCCTCTCCTTAGTTCTGGATTGG 58.966 47.826 0.00 0.00 0.00 3.16
2139 2496 5.683876 TTCCTCTCCTTAGTTCTGGATTG 57.316 43.478 0.00 0.00 0.00 2.67
2140 2497 6.899892 AATTCCTCTCCTTAGTTCTGGATT 57.100 37.500 0.00 0.00 0.00 3.01
2141 2498 7.996758 TTAATTCCTCTCCTTAGTTCTGGAT 57.003 36.000 0.00 0.00 0.00 3.41
2142 2499 7.808279 TTTAATTCCTCTCCTTAGTTCTGGA 57.192 36.000 0.00 0.00 0.00 3.86
2143 2500 8.267894 TCATTTAATTCCTCTCCTTAGTTCTGG 58.732 37.037 0.00 0.00 0.00 3.86
2144 2501 9.323985 CTCATTTAATTCCTCTCCTTAGTTCTG 57.676 37.037 0.00 0.00 0.00 3.02
2145 2502 8.490311 CCTCATTTAATTCCTCTCCTTAGTTCT 58.510 37.037 0.00 0.00 0.00 3.01
2146 2503 8.487028 TCCTCATTTAATTCCTCTCCTTAGTTC 58.513 37.037 0.00 0.00 0.00 3.01
2147 2504 8.393959 TCCTCATTTAATTCCTCTCCTTAGTT 57.606 34.615 0.00 0.00 0.00 2.24
2148 2505 7.846823 TCTCCTCATTTAATTCCTCTCCTTAGT 59.153 37.037 0.00 0.00 0.00 2.24
2149 2506 8.256356 TCTCCTCATTTAATTCCTCTCCTTAG 57.744 38.462 0.00 0.00 0.00 2.18
2150 2507 8.068110 TCTCTCCTCATTTAATTCCTCTCCTTA 58.932 37.037 0.00 0.00 0.00 2.69
2151 2508 6.905776 TCTCTCCTCATTTAATTCCTCTCCTT 59.094 38.462 0.00 0.00 0.00 3.36
2152 2509 6.448202 TCTCTCCTCATTTAATTCCTCTCCT 58.552 40.000 0.00 0.00 0.00 3.69
2153 2510 6.553100 TCTCTCTCCTCATTTAATTCCTCTCC 59.447 42.308 0.00 0.00 0.00 3.71
2154 2511 7.505585 TCTCTCTCTCCTCATTTAATTCCTCTC 59.494 40.741 0.00 0.00 0.00 3.20
2155 2512 7.361438 TCTCTCTCTCCTCATTTAATTCCTCT 58.639 38.462 0.00 0.00 0.00 3.69
2156 2513 7.595819 TCTCTCTCTCCTCATTTAATTCCTC 57.404 40.000 0.00 0.00 0.00 3.71
2157 2514 6.041979 GCTCTCTCTCTCCTCATTTAATTCCT 59.958 42.308 0.00 0.00 0.00 3.36
2158 2515 6.041979 AGCTCTCTCTCTCCTCATTTAATTCC 59.958 42.308 0.00 0.00 0.00 3.01
2159 2516 7.054491 AGCTCTCTCTCTCCTCATTTAATTC 57.946 40.000 0.00 0.00 0.00 2.17
2160 2517 8.546083 TTAGCTCTCTCTCTCCTCATTTAATT 57.454 34.615 0.00 0.00 0.00 1.40
2161 2518 8.725606 ATTAGCTCTCTCTCTCCTCATTTAAT 57.274 34.615 0.00 0.00 0.00 1.40
2162 2519 9.073475 GTATTAGCTCTCTCTCTCCTCATTTAA 57.927 37.037 0.00 0.00 0.00 1.52
2163 2520 8.221251 TGTATTAGCTCTCTCTCTCCTCATTTA 58.779 37.037 0.00 0.00 0.00 1.40
2164 2521 7.066142 TGTATTAGCTCTCTCTCTCCTCATTT 58.934 38.462 0.00 0.00 0.00 2.32
2165 2522 6.609876 TGTATTAGCTCTCTCTCTCCTCATT 58.390 40.000 0.00 0.00 0.00 2.57
2166 2523 6.199557 TGTATTAGCTCTCTCTCTCCTCAT 57.800 41.667 0.00 0.00 0.00 2.90
2167 2524 5.638530 TGTATTAGCTCTCTCTCTCCTCA 57.361 43.478 0.00 0.00 0.00 3.86
2168 2525 8.807948 AATATGTATTAGCTCTCTCTCTCCTC 57.192 38.462 0.00 0.00 0.00 3.71
2169 2526 9.600432 AAAATATGTATTAGCTCTCTCTCTCCT 57.400 33.333 0.00 0.00 0.00 3.69
2213 2570 9.654663 GACTAGTCTTGAGGCTAAAATCTTTTA 57.345 33.333 15.91 0.00 0.00 1.52
2214 2571 7.608376 GGACTAGTCTTGAGGCTAAAATCTTTT 59.392 37.037 21.88 0.00 0.00 2.27
2215 2572 7.037945 AGGACTAGTCTTGAGGCTAAAATCTTT 60.038 37.037 21.88 0.00 0.00 2.52
2216 2573 6.442244 AGGACTAGTCTTGAGGCTAAAATCTT 59.558 38.462 21.88 0.00 0.00 2.40
2217 2574 5.961421 AGGACTAGTCTTGAGGCTAAAATCT 59.039 40.000 21.88 3.06 0.00 2.40
2218 2575 6.228616 AGGACTAGTCTTGAGGCTAAAATC 57.771 41.667 21.88 0.73 0.00 2.17
2219 2576 6.183360 GCTAGGACTAGTCTTGAGGCTAAAAT 60.183 42.308 21.88 0.00 35.65 1.82
2220 2577 5.127356 GCTAGGACTAGTCTTGAGGCTAAAA 59.873 44.000 21.88 0.00 35.65 1.52
2221 2578 4.645588 GCTAGGACTAGTCTTGAGGCTAAA 59.354 45.833 21.88 0.00 35.65 1.85
2222 2579 4.208746 GCTAGGACTAGTCTTGAGGCTAA 58.791 47.826 21.88 0.00 35.65 3.09
2223 2580 3.435313 GGCTAGGACTAGTCTTGAGGCTA 60.435 52.174 24.87 16.06 35.06 3.93
2224 2581 2.661718 GCTAGGACTAGTCTTGAGGCT 58.338 52.381 21.88 11.79 35.65 4.58
2225 2582 1.684450 GGCTAGGACTAGTCTTGAGGC 59.316 57.143 21.88 21.38 35.06 4.70
2226 2583 3.306472 AGGCTAGGACTAGTCTTGAGG 57.694 52.381 21.88 10.56 45.03 3.86
2232 2589 5.687780 ACTAAAGAGAGGCTAGGACTAGTC 58.312 45.833 14.87 14.87 38.03 2.59
2233 2590 5.192121 TGACTAAAGAGAGGCTAGGACTAGT 59.808 44.000 0.00 0.00 35.65 2.57
2234 2591 5.686753 TGACTAAAGAGAGGCTAGGACTAG 58.313 45.833 1.98 1.98 36.29 2.57
2235 2592 5.398126 CCTGACTAAAGAGAGGCTAGGACTA 60.398 48.000 0.00 0.00 29.08 2.59
2236 2593 4.532834 CTGACTAAAGAGAGGCTAGGACT 58.467 47.826 0.00 0.00 0.00 3.85
2237 2594 3.634910 CCTGACTAAAGAGAGGCTAGGAC 59.365 52.174 0.00 0.00 29.08 3.85
2238 2595 3.373220 CCCTGACTAAAGAGAGGCTAGGA 60.373 52.174 0.00 0.00 29.08 2.94
2239 2596 2.962421 CCCTGACTAAAGAGAGGCTAGG 59.038 54.545 0.00 0.00 0.00 3.02
2240 2597 2.962421 CCCCTGACTAAAGAGAGGCTAG 59.038 54.545 0.00 0.00 0.00 3.42
2241 2598 2.315155 ACCCCTGACTAAAGAGAGGCTA 59.685 50.000 0.00 0.00 0.00 3.93
2242 2599 1.079658 ACCCCTGACTAAAGAGAGGCT 59.920 52.381 0.00 0.00 0.00 4.58
2243 2600 1.208293 CACCCCTGACTAAAGAGAGGC 59.792 57.143 0.00 0.00 0.00 4.70
2244 2601 1.208293 GCACCCCTGACTAAAGAGAGG 59.792 57.143 0.00 0.00 0.00 3.69
2245 2602 2.183679 AGCACCCCTGACTAAAGAGAG 58.816 52.381 0.00 0.00 0.00 3.20
2246 2603 2.303022 CAAGCACCCCTGACTAAAGAGA 59.697 50.000 0.00 0.00 0.00 3.10
2247 2604 2.303022 TCAAGCACCCCTGACTAAAGAG 59.697 50.000 0.00 0.00 0.00 2.85
2248 2605 2.334977 TCAAGCACCCCTGACTAAAGA 58.665 47.619 0.00 0.00 0.00 2.52
2249 2606 2.859165 TCAAGCACCCCTGACTAAAG 57.141 50.000 0.00 0.00 0.00 1.85
2250 2607 3.117663 AGTTTCAAGCACCCCTGACTAAA 60.118 43.478 0.00 0.00 0.00 1.85
2251 2608 2.441750 AGTTTCAAGCACCCCTGACTAA 59.558 45.455 0.00 0.00 0.00 2.24
2252 2609 2.054799 AGTTTCAAGCACCCCTGACTA 58.945 47.619 0.00 0.00 0.00 2.59
2253 2610 0.846693 AGTTTCAAGCACCCCTGACT 59.153 50.000 0.00 0.00 0.00 3.41
2254 2611 1.692411 AAGTTTCAAGCACCCCTGAC 58.308 50.000 0.00 0.00 0.00 3.51
2255 2612 2.452600 AAAGTTTCAAGCACCCCTGA 57.547 45.000 0.00 0.00 0.00 3.86
2256 2613 2.029918 GCTAAAGTTTCAAGCACCCCTG 60.030 50.000 5.64 0.00 36.26 4.45
2257 2614 2.239400 GCTAAAGTTTCAAGCACCCCT 58.761 47.619 5.64 0.00 36.26 4.79
2258 2615 1.272490 GGCTAAAGTTTCAAGCACCCC 59.728 52.381 11.51 0.00 38.01 4.95
2259 2616 2.229062 GAGGCTAAAGTTTCAAGCACCC 59.771 50.000 11.51 0.00 38.01 4.61
2260 2617 2.884639 TGAGGCTAAAGTTTCAAGCACC 59.115 45.455 11.51 4.28 38.01 5.01
2261 2618 4.773323 ATGAGGCTAAAGTTTCAAGCAC 57.227 40.909 11.51 6.37 38.01 4.40
2262 2619 5.789643 AAATGAGGCTAAAGTTTCAAGCA 57.210 34.783 11.51 0.00 38.01 3.91
2263 2620 7.867909 ACTAAAAATGAGGCTAAAGTTTCAAGC 59.132 33.333 2.28 2.28 35.47 4.01
2264 2621 9.399403 GACTAAAAATGAGGCTAAAGTTTCAAG 57.601 33.333 0.00 0.00 0.00 3.02
2265 2622 8.908903 TGACTAAAAATGAGGCTAAAGTTTCAA 58.091 29.630 0.00 0.00 0.00 2.69
2266 2623 8.458573 TGACTAAAAATGAGGCTAAAGTTTCA 57.541 30.769 0.00 0.00 0.00 2.69
2267 2624 8.784043 TCTGACTAAAAATGAGGCTAAAGTTTC 58.216 33.333 0.00 0.00 0.00 2.78
2268 2625 8.568794 GTCTGACTAAAAATGAGGCTAAAGTTT 58.431 33.333 0.00 0.00 0.00 2.66
2269 2626 7.939588 AGTCTGACTAAAAATGAGGCTAAAGTT 59.060 33.333 8.91 0.00 0.00 2.66
2270 2627 7.454225 AGTCTGACTAAAAATGAGGCTAAAGT 58.546 34.615 8.91 0.00 0.00 2.66
2271 2628 7.065204 GGAGTCTGACTAAAAATGAGGCTAAAG 59.935 40.741 10.86 0.00 0.00 1.85
2272 2629 6.879458 GGAGTCTGACTAAAAATGAGGCTAAA 59.121 38.462 10.86 0.00 0.00 1.85
2273 2630 6.213600 AGGAGTCTGACTAAAAATGAGGCTAA 59.786 38.462 10.86 0.00 0.00 3.09
2274 2631 5.721960 AGGAGTCTGACTAAAAATGAGGCTA 59.278 40.000 10.86 0.00 0.00 3.93
2275 2632 4.534103 AGGAGTCTGACTAAAAATGAGGCT 59.466 41.667 10.86 0.00 0.00 4.58
2276 2633 4.837972 AGGAGTCTGACTAAAAATGAGGC 58.162 43.478 10.86 0.00 0.00 4.70
2283 2640 9.601217 GCTTGATATAAAGGAGTCTGACTAAAA 57.399 33.333 10.86 0.00 0.00 1.52
2284 2641 8.758829 TGCTTGATATAAAGGAGTCTGACTAAA 58.241 33.333 10.86 0.00 0.00 1.85
2285 2642 8.198109 GTGCTTGATATAAAGGAGTCTGACTAA 58.802 37.037 10.86 0.00 0.00 2.24
2286 2643 7.201920 GGTGCTTGATATAAAGGAGTCTGACTA 60.202 40.741 10.86 0.00 0.00 2.59
2287 2644 6.407525 GGTGCTTGATATAAAGGAGTCTGACT 60.408 42.308 10.66 10.66 0.00 3.41
2288 2645 5.755861 GGTGCTTGATATAAAGGAGTCTGAC 59.244 44.000 1.84 0.00 0.00 3.51
2289 2646 5.163301 GGGTGCTTGATATAAAGGAGTCTGA 60.163 44.000 1.84 0.00 0.00 3.27
2290 2647 5.059833 GGGTGCTTGATATAAAGGAGTCTG 58.940 45.833 1.84 0.00 0.00 3.51
2291 2648 4.971924 AGGGTGCTTGATATAAAGGAGTCT 59.028 41.667 1.84 0.00 0.00 3.24
2292 2649 5.297569 AGGGTGCTTGATATAAAGGAGTC 57.702 43.478 1.84 0.00 0.00 3.36
2293 2650 5.717119 AAGGGTGCTTGATATAAAGGAGT 57.283 39.130 1.84 0.00 0.00 3.85
2294 2651 8.571336 CATAAAAGGGTGCTTGATATAAAGGAG 58.429 37.037 1.84 0.00 0.00 3.69
2295 2652 7.505585 CCATAAAAGGGTGCTTGATATAAAGGA 59.494 37.037 1.84 0.00 0.00 3.36
2296 2653 7.287696 ACCATAAAAGGGTGCTTGATATAAAGG 59.712 37.037 1.84 0.00 37.23 3.11
2297 2654 8.237811 ACCATAAAAGGGTGCTTGATATAAAG 57.762 34.615 0.00 0.00 37.23 1.85
2298 2655 8.474025 CAACCATAAAAGGGTGCTTGATATAAA 58.526 33.333 0.00 0.00 39.97 1.40
2299 2656 7.069331 CCAACCATAAAAGGGTGCTTGATATAA 59.931 37.037 0.00 0.00 45.26 0.98
2300 2657 6.549364 CCAACCATAAAAGGGTGCTTGATATA 59.451 38.462 0.00 0.00 45.26 0.86
2301 2658 5.363580 CCAACCATAAAAGGGTGCTTGATAT 59.636 40.000 0.00 0.00 45.26 1.63
2302 2659 4.709397 CCAACCATAAAAGGGTGCTTGATA 59.291 41.667 0.00 0.00 45.26 2.15
2303 2660 3.515104 CCAACCATAAAAGGGTGCTTGAT 59.485 43.478 0.00 0.00 45.26 2.57
2304 2661 2.896685 CCAACCATAAAAGGGTGCTTGA 59.103 45.455 0.00 0.00 45.26 3.02
2305 2662 2.028203 CCCAACCATAAAAGGGTGCTTG 60.028 50.000 0.00 0.00 45.26 4.01
2306 2663 2.158234 TCCCAACCATAAAAGGGTGCTT 60.158 45.455 0.00 0.00 45.26 3.91
2307 2664 1.431243 TCCCAACCATAAAAGGGTGCT 59.569 47.619 0.00 0.00 45.26 4.40
2308 2665 1.931635 TCCCAACCATAAAAGGGTGC 58.068 50.000 0.00 0.00 45.26 5.01
2309 2666 3.643792 TGTTTCCCAACCATAAAAGGGTG 59.356 43.478 0.00 0.00 46.21 4.61
2310 2667 3.930035 TGTTTCCCAACCATAAAAGGGT 58.070 40.909 0.00 0.00 42.12 4.34
2311 2668 5.497464 AATGTTTCCCAACCATAAAAGGG 57.503 39.130 0.00 0.00 42.86 3.95
2312 2669 9.161629 GAATAAATGTTTCCCAACCATAAAAGG 57.838 33.333 0.00 0.00 31.02 3.11
2313 2670 8.868916 CGAATAAATGTTTCCCAACCATAAAAG 58.131 33.333 0.00 0.00 31.02 2.27
2314 2671 7.332182 GCGAATAAATGTTTCCCAACCATAAAA 59.668 33.333 0.00 0.00 31.02 1.52
2315 2672 6.814146 GCGAATAAATGTTTCCCAACCATAAA 59.186 34.615 0.00 0.00 31.02 1.40
2316 2673 6.153680 AGCGAATAAATGTTTCCCAACCATAA 59.846 34.615 0.00 0.00 31.02 1.90
2317 2674 5.654650 AGCGAATAAATGTTTCCCAACCATA 59.345 36.000 0.00 0.00 31.02 2.74
2318 2675 4.466015 AGCGAATAAATGTTTCCCAACCAT 59.534 37.500 0.00 0.00 31.02 3.55
2399 2756 3.742369 GTGCAATTCACCAAACCATTCAG 59.258 43.478 0.00 0.00 39.79 3.02
2439 2796 1.908299 TCAGTCGAGCCCAGAAGCA 60.908 57.895 0.00 0.00 34.23 3.91
2440 2797 1.446966 GTCAGTCGAGCCCAGAAGC 60.447 63.158 0.00 0.00 0.00 3.86
2466 2823 5.188555 AGCTCAATTACTCCTGATCAGTTCA 59.811 40.000 21.11 4.21 0.00 3.18
2467 2824 5.523188 CAGCTCAATTACTCCTGATCAGTTC 59.477 44.000 21.11 0.00 0.00 3.01
2468 2825 5.426504 CAGCTCAATTACTCCTGATCAGTT 58.573 41.667 21.11 5.13 0.00 3.16
2469 2826 4.141756 CCAGCTCAATTACTCCTGATCAGT 60.142 45.833 21.11 6.65 0.00 3.41
2502 2859 6.418819 AGCGAGCAATAATTACATGCAAATTC 59.581 34.615 20.95 12.03 42.45 2.17
2574 2931 2.721906 ACCCATCTTTCCTTTTCTCCCA 59.278 45.455 0.00 0.00 0.00 4.37
2655 3014 0.667993 CACGCCATCTCTCTCTCTCC 59.332 60.000 0.00 0.00 0.00 3.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.