Multiple sequence alignment - TraesCS3B01G356400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G356400 chr3B 100.000 2009 0 0 1 2009 566642528 566640520 0.000000e+00 3711.0
1 TraesCS3B01G356400 chr3B 100.000 517 0 0 2235 2751 566640294 566639778 0.000000e+00 955.0
2 TraesCS3B01G356400 chr3B 95.222 293 12 2 1 292 42860090 42860381 1.930000e-126 462.0
3 TraesCS3B01G356400 chr3B 93.590 312 15 5 1 309 94487875 94488184 6.940000e-126 460.0
4 TraesCS3B01G356400 chr3B 95.189 291 12 2 1 290 815184617 815184906 2.500000e-125 459.0
5 TraesCS3B01G356400 chr3D 90.548 1587 76 26 349 1901 433555037 433553491 0.000000e+00 2032.0
6 TraesCS3B01G356400 chr3D 88.630 343 25 8 2237 2570 433553338 433553001 3.300000e-109 405.0
7 TraesCS3B01G356400 chr3A 88.467 1318 66 36 349 1643 572119555 572118301 0.000000e+00 1513.0
8 TraesCS3B01G356400 chr3A 88.657 335 24 9 2244 2570 572117794 572117466 1.990000e-106 396.0
9 TraesCS3B01G356400 chr3A 88.835 206 7 5 1672 1871 572118206 572118011 3.540000e-59 239.0
10 TraesCS3B01G356400 chr3A 90.000 40 4 0 1179 1218 572038998 572038959 5.000000e-03 52.8
11 TraesCS3B01G356400 chr3A 90.000 40 4 0 1179 1218 572043833 572043794 5.000000e-03 52.8
12 TraesCS3B01G356400 chr1B 96.479 284 10 0 1 284 206978727 206979010 1.150000e-128 470.0
13 TraesCS3B01G356400 chr1B 100.000 30 0 0 293 322 613876271 613876242 3.830000e-04 56.5
14 TraesCS3B01G356400 chr4B 96.441 281 10 0 1 281 662087704 662087424 5.370000e-127 464.0
15 TraesCS3B01G356400 chr7B 95.517 290 11 2 1 288 604311936 604311647 1.930000e-126 462.0
16 TraesCS3B01G356400 chr2B 95.222 293 11 3 1 290 316103800 316104092 6.940000e-126 460.0
17 TraesCS3B01G356400 chr2B 95.486 288 12 1 1 287 449931110 449930823 2.500000e-125 459.0
18 TraesCS3B01G356400 chr2B 90.811 185 17 0 2567 2751 738700762 738700946 5.880000e-62 248.0
19 TraesCS3B01G356400 chr5B 94.595 296 13 2 1 293 655231741 655232036 3.230000e-124 455.0
20 TraesCS3B01G356400 chr5B 89.785 186 19 0 2566 2751 417155381 417155196 3.540000e-59 239.0
21 TraesCS3B01G356400 chr2A 90.323 186 18 0 2566 2751 96070407 96070592 7.610000e-61 244.0
22 TraesCS3B01G356400 chr2A 90.323 186 17 1 2566 2751 141900354 141900538 2.740000e-60 243.0
23 TraesCS3B01G356400 chr6A 89.894 188 16 2 2566 2751 584702376 584702190 3.540000e-59 239.0
24 TraesCS3B01G356400 chr6A 89.785 186 18 1 2566 2751 503431396 503431580 1.270000e-58 237.0
25 TraesCS3B01G356400 chr7D 89.005 191 21 0 2561 2751 7471178 7470988 1.270000e-58 237.0
26 TraesCS3B01G356400 chr5A 89.785 186 18 1 2566 2751 461805405 461805589 1.270000e-58 237.0
27 TraesCS3B01G356400 chr1A 88.601 193 22 0 2559 2751 310729338 310729530 4.580000e-58 235.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G356400 chr3B 566639778 566642528 2750 True 2333.0 3711 100.000 1 2751 2 chr3B.!!$R1 2750
1 TraesCS3B01G356400 chr3D 433553001 433555037 2036 True 1218.5 2032 89.589 349 2570 2 chr3D.!!$R1 2221
2 TraesCS3B01G356400 chr3A 572117466 572119555 2089 True 716.0 1513 88.653 349 2570 3 chr3A.!!$R3 2221

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
238 239 0.107993 AGTCGTGATGGAGGCATGTG 60.108 55.0 0.0 0.0 0.0 3.21 F
239 240 0.108186 GTCGTGATGGAGGCATGTGA 60.108 55.0 0.0 0.0 0.0 3.58 F
240 241 0.176449 TCGTGATGGAGGCATGTGAG 59.824 55.0 0.0 0.0 0.0 3.51 F
346 347 0.180406 ACAACTTGAACGTGGCTCCT 59.820 50.0 0.0 0.0 0.0 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1334 1370 0.037326 TCTTCCAGATGTGACCGTGC 60.037 55.0 0.00 0.0 0.0 5.34 R
1336 1372 0.247736 GCTCTTCCAGATGTGACCGT 59.752 55.0 0.00 0.0 0.0 4.83 R
1338 1374 0.460987 CCGCTCTTCCAGATGTGACC 60.461 60.0 0.00 0.0 0.0 4.02 R
1905 2083 0.607489 GCTGGGCATATGGAATCGCT 60.607 55.0 4.56 0.0 0.0 4.93 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
20 21 2.485677 CCCTATGGCAACTGCAGTG 58.514 57.895 22.49 15.42 44.36 3.66
21 22 0.322816 CCCTATGGCAACTGCAGTGT 60.323 55.000 22.49 7.95 44.36 3.55
22 23 1.065491 CCCTATGGCAACTGCAGTGTA 60.065 52.381 22.49 7.59 44.36 2.90
23 24 2.617788 CCCTATGGCAACTGCAGTGTAA 60.618 50.000 22.49 7.20 44.36 2.41
24 25 3.081061 CCTATGGCAACTGCAGTGTAAA 58.919 45.455 22.49 7.60 44.36 2.01
25 26 3.119849 CCTATGGCAACTGCAGTGTAAAC 60.120 47.826 22.49 10.01 44.36 2.01
26 27 1.756430 TGGCAACTGCAGTGTAAACA 58.244 45.000 22.49 12.56 44.36 2.83
27 28 2.305928 TGGCAACTGCAGTGTAAACAT 58.694 42.857 22.49 0.00 44.36 2.71
28 29 2.293122 TGGCAACTGCAGTGTAAACATC 59.707 45.455 22.49 5.31 44.36 3.06
29 30 2.574322 GCAACTGCAGTGTAAACATCG 58.426 47.619 22.49 1.94 41.59 3.84
30 31 2.032030 GCAACTGCAGTGTAAACATCGT 60.032 45.455 22.49 0.00 41.59 3.73
31 32 3.544651 CAACTGCAGTGTAAACATCGTG 58.455 45.455 22.49 6.80 0.00 4.35
32 33 2.143122 ACTGCAGTGTAAACATCGTGG 58.857 47.619 20.97 0.00 0.00 4.94
33 34 0.871722 TGCAGTGTAAACATCGTGGC 59.128 50.000 0.00 0.00 0.00 5.01
34 35 0.871722 GCAGTGTAAACATCGTGGCA 59.128 50.000 0.00 0.00 0.00 4.92
35 36 1.265635 GCAGTGTAAACATCGTGGCAA 59.734 47.619 0.00 0.00 0.00 4.52
36 37 2.916111 CAGTGTAAACATCGTGGCAAC 58.084 47.619 0.00 0.00 0.00 4.17
37 38 2.548057 CAGTGTAAACATCGTGGCAACT 59.452 45.455 0.00 0.00 37.61 3.16
38 39 3.003275 CAGTGTAAACATCGTGGCAACTT 59.997 43.478 0.00 0.00 37.61 2.66
39 40 3.250040 AGTGTAAACATCGTGGCAACTTC 59.750 43.478 0.00 0.00 37.61 3.01
40 41 3.250040 GTGTAAACATCGTGGCAACTTCT 59.750 43.478 0.00 0.00 37.61 2.85
41 42 3.249799 TGTAAACATCGTGGCAACTTCTG 59.750 43.478 0.00 0.00 37.61 3.02
42 43 1.238439 AACATCGTGGCAACTTCTGG 58.762 50.000 0.00 0.00 37.61 3.86
43 44 0.108585 ACATCGTGGCAACTTCTGGT 59.891 50.000 0.00 0.00 37.61 4.00
44 45 1.346395 ACATCGTGGCAACTTCTGGTA 59.654 47.619 0.00 0.00 37.61 3.25
45 46 2.224426 ACATCGTGGCAACTTCTGGTAA 60.224 45.455 0.00 0.00 37.61 2.85
46 47 2.623878 TCGTGGCAACTTCTGGTAAA 57.376 45.000 0.00 0.00 37.61 2.01
47 48 2.920524 TCGTGGCAACTTCTGGTAAAA 58.079 42.857 0.00 0.00 37.61 1.52
48 49 3.280295 TCGTGGCAACTTCTGGTAAAAA 58.720 40.909 0.00 0.00 37.61 1.94
72 73 7.953305 AAAATCGTCGAAACATATCAACATG 57.047 32.000 0.00 0.00 0.00 3.21
73 74 5.657470 ATCGTCGAAACATATCAACATGG 57.343 39.130 0.00 0.00 0.00 3.66
74 75 3.868661 TCGTCGAAACATATCAACATGGG 59.131 43.478 0.00 0.00 0.00 4.00
75 76 3.002246 CGTCGAAACATATCAACATGGGG 59.998 47.826 0.00 0.00 0.00 4.96
76 77 3.945285 GTCGAAACATATCAACATGGGGT 59.055 43.478 0.00 0.00 0.00 4.95
77 78 4.035208 GTCGAAACATATCAACATGGGGTC 59.965 45.833 0.00 0.00 0.00 4.46
78 79 4.080582 TCGAAACATATCAACATGGGGTCT 60.081 41.667 0.00 0.00 0.00 3.85
79 80 5.129650 TCGAAACATATCAACATGGGGTCTA 59.870 40.000 0.00 0.00 0.00 2.59
80 81 5.466728 CGAAACATATCAACATGGGGTCTAG 59.533 44.000 0.00 0.00 0.00 2.43
81 82 5.975988 AACATATCAACATGGGGTCTAGT 57.024 39.130 0.00 0.00 0.00 2.57
82 83 5.975988 ACATATCAACATGGGGTCTAGTT 57.024 39.130 0.00 0.00 0.00 2.24
83 84 6.327386 ACATATCAACATGGGGTCTAGTTT 57.673 37.500 0.00 0.00 0.00 2.66
84 85 6.731467 ACATATCAACATGGGGTCTAGTTTT 58.269 36.000 0.00 0.00 0.00 2.43
85 86 6.603201 ACATATCAACATGGGGTCTAGTTTTG 59.397 38.462 0.00 0.00 0.00 2.44
86 87 4.715534 TCAACATGGGGTCTAGTTTTGA 57.284 40.909 0.00 0.00 0.00 2.69
87 88 5.055265 TCAACATGGGGTCTAGTTTTGAA 57.945 39.130 0.00 0.00 0.00 2.69
88 89 5.070001 TCAACATGGGGTCTAGTTTTGAAG 58.930 41.667 0.00 0.00 0.00 3.02
89 90 4.993705 ACATGGGGTCTAGTTTTGAAGA 57.006 40.909 0.00 0.00 0.00 2.87
90 91 5.520748 ACATGGGGTCTAGTTTTGAAGAT 57.479 39.130 0.00 0.00 0.00 2.40
91 92 5.501156 ACATGGGGTCTAGTTTTGAAGATC 58.499 41.667 0.00 0.00 0.00 2.75
92 93 5.251700 ACATGGGGTCTAGTTTTGAAGATCT 59.748 40.000 0.00 0.00 0.00 2.75
93 94 5.422214 TGGGGTCTAGTTTTGAAGATCTC 57.578 43.478 0.00 0.00 0.00 2.75
94 95 4.081642 TGGGGTCTAGTTTTGAAGATCTCG 60.082 45.833 0.00 0.00 0.00 4.04
95 96 4.081586 GGGGTCTAGTTTTGAAGATCTCGT 60.082 45.833 0.00 0.00 0.00 4.18
96 97 5.103687 GGGTCTAGTTTTGAAGATCTCGTC 58.896 45.833 0.00 0.00 0.00 4.20
97 98 4.794246 GGTCTAGTTTTGAAGATCTCGTCG 59.206 45.833 0.00 0.00 0.00 5.12
98 99 5.391736 GGTCTAGTTTTGAAGATCTCGTCGA 60.392 44.000 0.00 0.00 0.00 4.20
99 100 5.735427 GTCTAGTTTTGAAGATCTCGTCGAG 59.265 44.000 16.33 16.33 0.00 4.04
100 101 4.768130 AGTTTTGAAGATCTCGTCGAGA 57.232 40.909 26.15 26.15 43.20 4.04
101 102 4.477780 AGTTTTGAAGATCTCGTCGAGAC 58.522 43.478 26.46 18.95 41.76 3.36
115 116 3.777478 GTCGAGACGGATTTAATGGTGA 58.223 45.455 0.00 0.00 0.00 4.02
116 117 4.178540 GTCGAGACGGATTTAATGGTGAA 58.821 43.478 0.00 0.00 0.00 3.18
117 118 4.628333 GTCGAGACGGATTTAATGGTGAAA 59.372 41.667 0.00 0.00 0.00 2.69
118 119 5.121142 GTCGAGACGGATTTAATGGTGAAAA 59.879 40.000 0.00 0.00 0.00 2.29
119 120 5.121142 TCGAGACGGATTTAATGGTGAAAAC 59.879 40.000 0.00 0.00 0.00 2.43
120 121 5.291293 AGACGGATTTAATGGTGAAAACG 57.709 39.130 0.00 0.00 0.00 3.60
121 122 4.155280 AGACGGATTTAATGGTGAAAACGG 59.845 41.667 0.00 0.00 0.00 4.44
122 123 4.073549 ACGGATTTAATGGTGAAAACGGA 58.926 39.130 0.00 0.00 0.00 4.69
123 124 4.703093 ACGGATTTAATGGTGAAAACGGAT 59.297 37.500 0.00 0.00 0.00 4.18
124 125 5.184287 ACGGATTTAATGGTGAAAACGGATT 59.816 36.000 0.00 0.00 0.00 3.01
125 126 6.096695 CGGATTTAATGGTGAAAACGGATTT 58.903 36.000 0.00 0.00 0.00 2.17
126 127 6.588373 CGGATTTAATGGTGAAAACGGATTTT 59.412 34.615 0.00 0.00 40.83 1.82
127 128 7.117092 CGGATTTAATGGTGAAAACGGATTTTT 59.883 33.333 0.00 0.00 38.17 1.94
128 129 9.425577 GGATTTAATGGTGAAAACGGATTTTTA 57.574 29.630 0.00 0.00 38.17 1.52
130 131 9.990360 ATTTAATGGTGAAAACGGATTTTTAGT 57.010 25.926 0.00 0.00 38.17 2.24
131 132 9.819267 TTTAATGGTGAAAACGGATTTTTAGTT 57.181 25.926 0.00 0.00 38.17 2.24
132 133 7.940178 AATGGTGAAAACGGATTTTTAGTTC 57.060 32.000 0.00 0.00 38.17 3.01
133 134 5.512473 TGGTGAAAACGGATTTTTAGTTCG 58.488 37.500 0.00 0.00 38.17 3.95
134 135 4.380678 GGTGAAAACGGATTTTTAGTTCGC 59.619 41.667 0.00 0.00 38.17 4.70
135 136 5.209977 GTGAAAACGGATTTTTAGTTCGCT 58.790 37.500 0.00 0.00 38.17 4.93
136 137 5.684184 GTGAAAACGGATTTTTAGTTCGCTT 59.316 36.000 0.00 0.00 38.17 4.68
137 138 6.197655 GTGAAAACGGATTTTTAGTTCGCTTT 59.802 34.615 0.00 0.00 38.17 3.51
138 139 6.752815 TGAAAACGGATTTTTAGTTCGCTTTT 59.247 30.769 0.00 0.00 38.17 2.27
139 140 7.275999 TGAAAACGGATTTTTAGTTCGCTTTTT 59.724 29.630 0.00 0.00 38.17 1.94
167 168 9.569167 GTTTAGGAGATACAACATTTTTAAGCC 57.431 33.333 0.00 0.00 0.00 4.35
168 169 6.436843 AGGAGATACAACATTTTTAAGCCG 57.563 37.500 0.00 0.00 0.00 5.52
169 170 6.177610 AGGAGATACAACATTTTTAAGCCGA 58.822 36.000 0.00 0.00 0.00 5.54
170 171 6.657541 AGGAGATACAACATTTTTAAGCCGAA 59.342 34.615 0.00 0.00 0.00 4.30
171 172 7.175990 AGGAGATACAACATTTTTAAGCCGAAA 59.824 33.333 0.00 0.00 0.00 3.46
172 173 7.810759 GGAGATACAACATTTTTAAGCCGAAAA 59.189 33.333 0.00 0.00 0.00 2.29
173 174 8.515473 AGATACAACATTTTTAAGCCGAAAAC 57.485 30.769 0.00 0.00 0.00 2.43
174 175 5.977171 ACAACATTTTTAAGCCGAAAACC 57.023 34.783 0.00 0.00 0.00 3.27
175 176 5.420409 ACAACATTTTTAAGCCGAAAACCA 58.580 33.333 0.00 0.00 0.00 3.67
176 177 5.875359 ACAACATTTTTAAGCCGAAAACCAA 59.125 32.000 0.00 0.00 0.00 3.67
177 178 6.371825 ACAACATTTTTAAGCCGAAAACCAAA 59.628 30.769 0.00 0.00 0.00 3.28
178 179 6.986904 ACATTTTTAAGCCGAAAACCAAAA 57.013 29.167 0.00 0.00 0.00 2.44
179 180 7.379098 ACATTTTTAAGCCGAAAACCAAAAA 57.621 28.000 0.00 0.00 31.65 1.94
209 210 8.622948 TCTACTGATGTCATCTATTCATACGT 57.377 34.615 13.90 0.00 0.00 3.57
210 211 8.507249 TCTACTGATGTCATCTATTCATACGTG 58.493 37.037 13.90 0.00 0.00 4.49
211 212 6.450545 ACTGATGTCATCTATTCATACGTGG 58.549 40.000 13.90 0.00 0.00 4.94
212 213 5.230182 TGATGTCATCTATTCATACGTGGC 58.770 41.667 13.90 0.00 0.00 5.01
213 214 4.664150 TGTCATCTATTCATACGTGGCA 57.336 40.909 0.00 0.00 0.00 4.92
214 215 5.017294 TGTCATCTATTCATACGTGGCAA 57.983 39.130 0.00 0.00 0.00 4.52
215 216 5.423886 TGTCATCTATTCATACGTGGCAAA 58.576 37.500 0.00 0.00 0.00 3.68
216 217 5.877564 TGTCATCTATTCATACGTGGCAAAA 59.122 36.000 0.00 0.00 0.00 2.44
217 218 6.542005 TGTCATCTATTCATACGTGGCAAAAT 59.458 34.615 0.00 0.00 0.00 1.82
218 219 6.852853 GTCATCTATTCATACGTGGCAAAATG 59.147 38.462 0.00 0.00 0.00 2.32
219 220 6.765512 TCATCTATTCATACGTGGCAAAATGA 59.234 34.615 0.00 0.00 0.00 2.57
220 221 6.603237 TCTATTCATACGTGGCAAAATGAG 57.397 37.500 0.00 0.00 30.53 2.90
221 222 6.112734 TCTATTCATACGTGGCAAAATGAGT 58.887 36.000 0.00 0.00 30.53 3.41
222 223 4.678509 TTCATACGTGGCAAAATGAGTC 57.321 40.909 0.00 0.00 30.53 3.36
223 224 2.670905 TCATACGTGGCAAAATGAGTCG 59.329 45.455 0.00 0.00 0.00 4.18
224 225 2.157834 TACGTGGCAAAATGAGTCGT 57.842 45.000 0.00 0.00 0.00 4.34
225 226 0.586319 ACGTGGCAAAATGAGTCGTG 59.414 50.000 0.00 0.00 0.00 4.35
226 227 0.865111 CGTGGCAAAATGAGTCGTGA 59.135 50.000 0.00 0.00 0.00 4.35
227 228 1.464608 CGTGGCAAAATGAGTCGTGAT 59.535 47.619 0.00 0.00 0.00 3.06
228 229 2.725759 CGTGGCAAAATGAGTCGTGATG 60.726 50.000 0.00 0.00 0.00 3.07
229 230 1.811965 TGGCAAAATGAGTCGTGATGG 59.188 47.619 0.00 0.00 0.00 3.51
230 231 2.083774 GGCAAAATGAGTCGTGATGGA 58.916 47.619 0.00 0.00 0.00 3.41
231 232 2.096496 GGCAAAATGAGTCGTGATGGAG 59.904 50.000 0.00 0.00 0.00 3.86
232 233 2.096496 GCAAAATGAGTCGTGATGGAGG 59.904 50.000 0.00 0.00 0.00 4.30
233 234 2.029838 AAATGAGTCGTGATGGAGGC 57.970 50.000 0.00 0.00 0.00 4.70
234 235 0.904649 AATGAGTCGTGATGGAGGCA 59.095 50.000 0.00 0.00 0.00 4.75
235 236 1.126488 ATGAGTCGTGATGGAGGCAT 58.874 50.000 0.00 0.00 0.00 4.40
236 237 0.176449 TGAGTCGTGATGGAGGCATG 59.824 55.000 0.00 0.00 0.00 4.06
237 238 0.176680 GAGTCGTGATGGAGGCATGT 59.823 55.000 0.00 0.00 0.00 3.21
238 239 0.107993 AGTCGTGATGGAGGCATGTG 60.108 55.000 0.00 0.00 0.00 3.21
239 240 0.108186 GTCGTGATGGAGGCATGTGA 60.108 55.000 0.00 0.00 0.00 3.58
240 241 0.176449 TCGTGATGGAGGCATGTGAG 59.824 55.000 0.00 0.00 0.00 3.51
241 242 1.434622 CGTGATGGAGGCATGTGAGC 61.435 60.000 0.00 0.00 0.00 4.26
242 243 1.153309 TGATGGAGGCATGTGAGCG 60.153 57.895 0.00 0.00 34.64 5.03
243 244 1.144716 GATGGAGGCATGTGAGCGA 59.855 57.895 0.00 0.00 34.64 4.93
244 245 0.250209 GATGGAGGCATGTGAGCGAT 60.250 55.000 0.00 0.00 34.64 4.58
245 246 0.534427 ATGGAGGCATGTGAGCGATG 60.534 55.000 0.00 0.00 34.64 3.84
246 247 1.153289 GGAGGCATGTGAGCGATGT 60.153 57.895 0.00 0.00 34.64 3.06
247 248 1.434622 GGAGGCATGTGAGCGATGTG 61.435 60.000 0.00 0.00 34.64 3.21
248 249 2.044832 GAGGCATGTGAGCGATGTGC 62.045 60.000 0.00 0.00 46.98 4.57
258 259 3.020102 GCGATGTGCAAACATCCAC 57.980 52.632 12.05 2.92 45.45 4.02
259 260 0.240678 GCGATGTGCAAACATCCACA 59.759 50.000 12.05 0.00 45.01 4.17
260 261 1.967762 CGATGTGCAAACATCCACAC 58.032 50.000 12.05 0.00 43.89 3.82
261 262 1.725611 CGATGTGCAAACATCCACACG 60.726 52.381 12.05 0.00 43.89 4.49
262 263 1.266718 GATGTGCAAACATCCACACGT 59.733 47.619 7.47 0.00 43.89 4.49
263 264 0.380024 TGTGCAAACATCCACACGTG 59.620 50.000 15.48 15.48 37.07 4.49
264 265 0.380378 GTGCAAACATCCACACGTGT 59.620 50.000 17.22 17.22 32.37 4.49
265 266 0.380024 TGCAAACATCCACACGTGTG 59.620 50.000 36.13 36.13 45.23 3.82
273 274 3.720531 CACACGTGTGGGCGTTAA 58.279 55.556 35.65 0.00 43.83 2.01
274 275 1.277440 CACACGTGTGGGCGTTAAC 59.723 57.895 35.65 0.00 43.83 2.01
275 276 1.153409 ACACGTGTGGGCGTTAACA 60.153 52.632 22.71 0.00 43.83 2.41
276 277 0.533308 ACACGTGTGGGCGTTAACAT 60.533 50.000 22.71 0.00 43.83 2.71
277 278 0.589223 CACGTGTGGGCGTTAACATT 59.411 50.000 7.58 0.00 43.83 2.71
278 279 1.002251 CACGTGTGGGCGTTAACATTT 60.002 47.619 7.58 0.00 43.83 2.32
279 280 1.264826 ACGTGTGGGCGTTAACATTTC 59.735 47.619 6.39 0.00 43.04 2.17
280 281 1.400500 CGTGTGGGCGTTAACATTTCC 60.400 52.381 6.39 1.91 0.00 3.13
281 282 1.609555 GTGTGGGCGTTAACATTTCCA 59.390 47.619 6.39 4.48 0.00 3.53
282 283 2.230266 GTGTGGGCGTTAACATTTCCAT 59.770 45.455 6.39 0.00 0.00 3.41
283 284 2.894126 TGTGGGCGTTAACATTTCCATT 59.106 40.909 6.39 0.00 0.00 3.16
284 285 4.079970 TGTGGGCGTTAACATTTCCATTA 58.920 39.130 6.39 0.00 0.00 1.90
285 286 4.523173 TGTGGGCGTTAACATTTCCATTAA 59.477 37.500 6.39 0.00 0.00 1.40
286 287 5.186021 TGTGGGCGTTAACATTTCCATTAAT 59.814 36.000 6.39 0.00 0.00 1.40
287 288 6.103330 GTGGGCGTTAACATTTCCATTAATT 58.897 36.000 6.39 0.00 0.00 1.40
288 289 7.093902 TGTGGGCGTTAACATTTCCATTAATTA 60.094 33.333 6.39 0.00 0.00 1.40
289 290 7.923878 GTGGGCGTTAACATTTCCATTAATTAT 59.076 33.333 6.39 0.00 0.00 1.28
290 291 9.132923 TGGGCGTTAACATTTCCATTAATTATA 57.867 29.630 6.39 0.00 0.00 0.98
314 315 9.998106 ATATAACTCCTCGCAAAATAATACAGT 57.002 29.630 0.00 0.00 0.00 3.55
316 317 9.826574 ATAACTCCTCGCAAAATAATACAGTAA 57.173 29.630 0.00 0.00 0.00 2.24
317 318 8.732746 AACTCCTCGCAAAATAATACAGTAAT 57.267 30.769 0.00 0.00 0.00 1.89
318 319 9.826574 AACTCCTCGCAAAATAATACAGTAATA 57.173 29.630 0.00 0.00 0.00 0.98
319 320 9.826574 ACTCCTCGCAAAATAATACAGTAATAA 57.173 29.630 0.00 0.00 0.00 1.40
342 343 7.631915 AATTAATTAACAACTTGAACGTGGC 57.368 32.000 0.00 0.00 0.00 5.01
343 344 4.911514 AATTAACAACTTGAACGTGGCT 57.088 36.364 0.00 0.00 0.00 4.75
344 345 3.955771 TTAACAACTTGAACGTGGCTC 57.044 42.857 0.00 0.00 0.00 4.70
345 346 1.021968 AACAACTTGAACGTGGCTCC 58.978 50.000 0.00 0.00 0.00 4.70
346 347 0.180406 ACAACTTGAACGTGGCTCCT 59.820 50.000 0.00 0.00 0.00 3.69
347 348 0.588252 CAACTTGAACGTGGCTCCTG 59.412 55.000 0.00 0.00 0.00 3.86
369 372 9.778741 TCCTGTAAATAAATCCATGTAGTGATC 57.221 33.333 0.00 0.00 0.00 2.92
374 377 2.140065 ATCCATGTAGTGATCGTGCG 57.860 50.000 0.00 0.00 0.00 5.34
388 391 0.523546 CGTGCGAGATAGCGTCAACT 60.524 55.000 0.00 0.00 40.67 3.16
391 394 1.802300 GCGAGATAGCGTCAACTGCG 61.802 60.000 0.00 0.00 37.44 5.18
413 416 4.451150 GATGTGAGGCCGCCGACA 62.451 66.667 16.87 16.87 0.00 4.35
503 506 4.680237 CGACAGCCGCCAACAGGA 62.680 66.667 0.00 0.00 0.00 3.86
598 601 2.289547 ACGAATAAACAAAGCGCACAGT 59.710 40.909 11.47 0.53 0.00 3.55
601 604 3.542712 ATAAACAAAGCGCACAGTGAG 57.457 42.857 11.47 1.31 0.00 3.51
786 797 1.792118 GAAAAAGCCGCGTTCCCACT 61.792 55.000 4.92 0.00 0.00 4.00
926 950 4.445545 CGTCGGCTGCGGCTTTTC 62.446 66.667 18.85 0.00 38.73 2.29
1026 1050 5.186797 ACAAAGACCACCTAATCTCTCTCTG 59.813 44.000 0.00 0.00 0.00 3.35
1030 1056 5.134339 AGACCACCTAATCTCTCTCTGATCT 59.866 44.000 0.00 0.00 0.00 2.75
1032 1058 4.523943 CCACCTAATCTCTCTCTGATCTGG 59.476 50.000 0.00 0.00 0.00 3.86
1035 1061 6.016024 CACCTAATCTCTCTCTGATCTGGAAG 60.016 46.154 0.00 0.00 0.00 3.46
1145 1181 6.709846 AGTTCTACACTTCTACTTCTACACGT 59.290 38.462 0.00 0.00 27.32 4.49
1151 1187 4.097589 ACTTCTACTTCTACACGTATGGGC 59.902 45.833 0.00 0.00 0.00 5.36
1271 1307 2.697761 GGAGCACGTCAGCGAGGTA 61.698 63.158 0.00 0.00 39.29 3.08
1280 1316 0.968901 TCAGCGAGGTAACCATCCGT 60.969 55.000 0.00 0.00 37.17 4.69
1381 1417 4.070552 GGCGTCGGAGCTTCTGGT 62.071 66.667 0.00 0.00 37.29 4.00
1382 1418 2.507324 GCGTCGGAGCTTCTGGTC 60.507 66.667 0.00 0.00 39.76 4.02
1406 1442 3.782443 ATGAACGCCGGGGAGGTC 61.782 66.667 27.23 18.26 43.70 3.85
1421 1457 2.049433 GTCCACCACCACGTCGAG 60.049 66.667 0.00 0.00 0.00 4.04
1539 1579 2.361230 CCGGGCTTGGGTTTCTCC 60.361 66.667 0.00 0.00 0.00 3.71
1571 1611 0.531974 TTGCTTCTTCGCCGTGTCTT 60.532 50.000 0.00 0.00 0.00 3.01
1572 1612 0.531974 TGCTTCTTCGCCGTGTCTTT 60.532 50.000 0.00 0.00 0.00 2.52
1573 1613 0.586802 GCTTCTTCGCCGTGTCTTTT 59.413 50.000 0.00 0.00 0.00 2.27
1574 1614 1.660333 GCTTCTTCGCCGTGTCTTTTG 60.660 52.381 0.00 0.00 0.00 2.44
1577 1617 2.823984 TCTTCGCCGTGTCTTTTGTTA 58.176 42.857 0.00 0.00 0.00 2.41
1579 1619 2.512485 TCGCCGTGTCTTTTGTTAGA 57.488 45.000 0.00 0.00 0.00 2.10
1592 1637 7.966204 TGTCTTTTGTTAGAACACAGCTTTTAC 59.034 33.333 0.00 0.00 38.92 2.01
1602 1647 0.454452 CAGCTTTTACGCGGCCTTTC 60.454 55.000 12.47 0.00 34.40 2.62
1608 1653 0.947180 TTACGCGGCCTTTCTGTGTC 60.947 55.000 12.47 0.00 43.32 3.67
1643 1691 7.873719 TTGGATCCAACGAACAATGTATATT 57.126 32.000 23.63 0.00 0.00 1.28
1644 1692 8.187480 TTTGGATCCAACGAACAATGTATATTG 58.813 33.333 27.04 10.37 41.27 1.90
1656 1785 8.519799 AACAATGTATATTGGTAGGGAAAGTG 57.480 34.615 15.61 0.00 46.33 3.16
1657 1786 7.060421 ACAATGTATATTGGTAGGGAAAGTGG 58.940 38.462 15.61 0.00 46.33 4.00
1658 1787 6.841781 ATGTATATTGGTAGGGAAAGTGGT 57.158 37.500 0.00 0.00 0.00 4.16
1659 1788 5.996644 TGTATATTGGTAGGGAAAGTGGTG 58.003 41.667 0.00 0.00 0.00 4.17
1660 1789 5.727279 TGTATATTGGTAGGGAAAGTGGTGA 59.273 40.000 0.00 0.00 0.00 4.02
1661 1790 5.994416 ATATTGGTAGGGAAAGTGGTGAT 57.006 39.130 0.00 0.00 0.00 3.06
1662 1791 7.569485 TGTATATTGGTAGGGAAAGTGGTGATA 59.431 37.037 0.00 0.00 0.00 2.15
1663 1792 4.563140 TTGGTAGGGAAAGTGGTGATAC 57.437 45.455 0.00 0.00 0.00 2.24
1664 1793 3.522759 TGGTAGGGAAAGTGGTGATACA 58.477 45.455 0.00 0.00 0.00 2.29
1665 1794 3.262405 TGGTAGGGAAAGTGGTGATACAC 59.738 47.826 0.00 0.00 41.63 2.90
1666 1795 3.262405 GGTAGGGAAAGTGGTGATACACA 59.738 47.826 0.00 0.00 43.72 3.72
1696 1825 8.266682 CGGTGATGTAAATTGTAAAGTAGATCG 58.733 37.037 0.00 0.00 28.49 3.69
1762 1897 3.008330 GCATTCTCAGTTGATCTGCTGT 58.992 45.455 13.87 0.00 43.32 4.40
1773 1908 3.016031 TGATCTGCTGTTTTGTGTGTGT 58.984 40.909 0.00 0.00 0.00 3.72
1774 1909 2.917701 TCTGCTGTTTTGTGTGTGTG 57.082 45.000 0.00 0.00 0.00 3.82
1775 1910 2.158559 TCTGCTGTTTTGTGTGTGTGT 58.841 42.857 0.00 0.00 0.00 3.72
1776 1911 2.095314 TCTGCTGTTTTGTGTGTGTGTG 60.095 45.455 0.00 0.00 0.00 3.82
1777 1912 1.611006 TGCTGTTTTGTGTGTGTGTGT 59.389 42.857 0.00 0.00 0.00 3.72
1778 1913 1.984990 GCTGTTTTGTGTGTGTGTGTG 59.015 47.619 0.00 0.00 0.00 3.82
1822 1958 1.606668 GATCCGCTGTCCAAAAACACA 59.393 47.619 0.00 0.00 0.00 3.72
1864 2000 4.564613 GGAAGAGGAGGAAGAAGAAACCTG 60.565 50.000 0.00 0.00 33.89 4.00
1902 2080 6.135290 CAAACTTGGAAACAGATCAGAACA 57.865 37.500 0.00 0.00 44.54 3.18
1903 2081 6.204359 CAAACTTGGAAACAGATCAGAACAG 58.796 40.000 0.00 0.00 44.54 3.16
1904 2082 5.296151 ACTTGGAAACAGATCAGAACAGA 57.704 39.130 0.00 0.00 44.54 3.41
1905 2083 5.684704 ACTTGGAAACAGATCAGAACAGAA 58.315 37.500 0.00 0.00 44.54 3.02
1906 2084 5.762218 ACTTGGAAACAGATCAGAACAGAAG 59.238 40.000 0.00 0.00 44.54 2.85
1907 2085 4.067896 TGGAAACAGATCAGAACAGAAGC 58.932 43.478 0.00 0.00 35.01 3.86
1908 2086 3.124297 GGAAACAGATCAGAACAGAAGCG 59.876 47.826 0.00 0.00 0.00 4.68
1909 2087 3.667497 AACAGATCAGAACAGAAGCGA 57.333 42.857 0.00 0.00 0.00 4.93
1910 2088 3.883830 ACAGATCAGAACAGAAGCGAT 57.116 42.857 0.00 0.00 0.00 4.58
1911 2089 4.199432 ACAGATCAGAACAGAAGCGATT 57.801 40.909 0.00 0.00 0.00 3.34
1912 2090 4.180057 ACAGATCAGAACAGAAGCGATTC 58.820 43.478 4.98 4.98 0.00 2.52
1913 2091 3.555139 CAGATCAGAACAGAAGCGATTCC 59.445 47.826 10.29 0.00 0.00 3.01
1914 2092 3.196469 AGATCAGAACAGAAGCGATTCCA 59.804 43.478 10.29 0.00 0.00 3.53
1915 2093 3.616956 TCAGAACAGAAGCGATTCCAT 57.383 42.857 10.29 0.00 0.00 3.41
1916 2094 4.736126 TCAGAACAGAAGCGATTCCATA 57.264 40.909 10.29 0.00 0.00 2.74
1922 2100 1.421268 AGAAGCGATTCCATATGCCCA 59.579 47.619 10.29 0.00 0.00 5.36
2258 2483 3.407698 ACCAACGAAGATTGCACACATA 58.592 40.909 0.00 0.00 0.00 2.29
2270 2495 6.803320 AGATTGCACACATACATTTTCTTTCG 59.197 34.615 0.00 0.00 0.00 3.46
2271 2496 4.225984 TGCACACATACATTTTCTTTCGC 58.774 39.130 0.00 0.00 0.00 4.70
2288 2513 2.750350 CCCACGTTCAGAAGCCCT 59.250 61.111 0.00 0.00 0.00 5.19
2317 2542 1.923356 AATGGGCATTCTTGGTTCGT 58.077 45.000 0.00 0.00 0.00 3.85
2348 2573 1.745141 GCGAGAGGCATGAATGACCTT 60.745 52.381 0.00 0.00 42.87 3.50
2359 2584 6.082338 GCATGAATGACCTTATTCGCTATTG 58.918 40.000 0.00 0.00 39.39 1.90
2361 2586 7.642669 CATGAATGACCTTATTCGCTATTGTT 58.357 34.615 0.00 0.00 39.39 2.83
2376 2601 8.883789 TCGCTATTGTTTTAGGATTTTAAACG 57.116 30.769 0.00 0.00 35.16 3.60
2377 2602 8.719648 TCGCTATTGTTTTAGGATTTTAAACGA 58.280 29.630 0.00 0.00 35.16 3.85
2400 2625 7.333672 ACGATTTAAGAAATCACCTCACCTAAC 59.666 37.037 11.40 0.00 45.94 2.34
2487 2719 7.338449 TCCTTTTGTGTAGTATTTAATCAGGCC 59.662 37.037 0.00 0.00 0.00 5.19
2501 2733 1.144708 TCAGGCCACACAATCAAGGAA 59.855 47.619 5.01 0.00 0.00 3.36
2512 2744 7.032580 CACACAATCAAGGAAGTTACAACAAA 58.967 34.615 0.00 0.00 0.00 2.83
2513 2745 7.220683 CACACAATCAAGGAAGTTACAACAAAG 59.779 37.037 0.00 0.00 0.00 2.77
2519 2751 7.317390 TCAAGGAAGTTACAACAAAGGAAAAC 58.683 34.615 0.00 0.00 0.00 2.43
2532 2764 9.701355 CAACAAAGGAAAACACAAAAATGATAC 57.299 29.630 0.00 0.00 0.00 2.24
2533 2765 9.665719 AACAAAGGAAAACACAAAAATGATACT 57.334 25.926 0.00 0.00 0.00 2.12
2553 2785 3.525199 ACTGAGCAGATTTGGATTAGGGT 59.475 43.478 4.21 0.00 0.00 4.34
2572 2804 0.618458 TGGCCAAGTGCTACTAAGGG 59.382 55.000 0.61 0.00 40.92 3.95
2573 2805 0.107165 GGCCAAGTGCTACTAAGGGG 60.107 60.000 0.00 0.00 40.92 4.79
2574 2806 0.107165 GCCAAGTGCTACTAAGGGGG 60.107 60.000 0.00 0.00 36.87 5.40
2575 2807 1.286248 CCAAGTGCTACTAAGGGGGT 58.714 55.000 0.00 0.00 0.00 4.95
2576 2808 1.065418 CCAAGTGCTACTAAGGGGGTG 60.065 57.143 0.00 0.00 0.00 4.61
2577 2809 1.628846 CAAGTGCTACTAAGGGGGTGT 59.371 52.381 0.00 0.00 0.00 4.16
2578 2810 2.039879 CAAGTGCTACTAAGGGGGTGTT 59.960 50.000 0.00 0.00 0.00 3.32
2579 2811 2.345560 AGTGCTACTAAGGGGGTGTTT 58.654 47.619 0.00 0.00 0.00 2.83
2580 2812 2.039879 AGTGCTACTAAGGGGGTGTTTG 59.960 50.000 0.00 0.00 0.00 2.93
2581 2813 2.059490 TGCTACTAAGGGGGTGTTTGT 58.941 47.619 0.00 0.00 0.00 2.83
2582 2814 2.444010 TGCTACTAAGGGGGTGTTTGTT 59.556 45.455 0.00 0.00 0.00 2.83
2583 2815 3.117436 TGCTACTAAGGGGGTGTTTGTTT 60.117 43.478 0.00 0.00 0.00 2.83
2584 2816 3.893200 GCTACTAAGGGGGTGTTTGTTTT 59.107 43.478 0.00 0.00 0.00 2.43
2585 2817 4.022589 GCTACTAAGGGGGTGTTTGTTTTC 60.023 45.833 0.00 0.00 0.00 2.29
2586 2818 3.302161 ACTAAGGGGGTGTTTGTTTTCC 58.698 45.455 0.00 0.00 0.00 3.13
2587 2819 1.116308 AAGGGGGTGTTTGTTTTCCG 58.884 50.000 0.00 0.00 0.00 4.30
2588 2820 0.032912 AGGGGGTGTTTGTTTTCCGT 60.033 50.000 0.00 0.00 0.00 4.69
2589 2821 0.103390 GGGGGTGTTTGTTTTCCGTG 59.897 55.000 0.00 0.00 0.00 4.94
2590 2822 1.104630 GGGGTGTTTGTTTTCCGTGA 58.895 50.000 0.00 0.00 0.00 4.35
2591 2823 1.202325 GGGGTGTTTGTTTTCCGTGAC 60.202 52.381 0.00 0.00 0.00 3.67
2592 2824 1.746787 GGGTGTTTGTTTTCCGTGACT 59.253 47.619 0.00 0.00 0.00 3.41
2593 2825 2.164827 GGGTGTTTGTTTTCCGTGACTT 59.835 45.455 0.00 0.00 0.00 3.01
2594 2826 3.367600 GGGTGTTTGTTTTCCGTGACTTT 60.368 43.478 0.00 0.00 0.00 2.66
2595 2827 4.239304 GGTGTTTGTTTTCCGTGACTTTT 58.761 39.130 0.00 0.00 0.00 2.27
2596 2828 4.687018 GGTGTTTGTTTTCCGTGACTTTTT 59.313 37.500 0.00 0.00 0.00 1.94
2618 2850 8.584063 TTTTTGTGTAGGGACTAGAAAAAGTT 57.416 30.769 0.00 0.00 41.46 2.66
2619 2851 8.584063 TTTTGTGTAGGGACTAGAAAAAGTTT 57.416 30.769 0.00 0.00 41.46 2.66
2620 2852 7.797038 TTGTGTAGGGACTAGAAAAAGTTTC 57.203 36.000 0.00 0.00 44.14 2.78
2621 2853 7.133133 TGTGTAGGGACTAGAAAAAGTTTCT 57.867 36.000 8.23 8.23 44.14 2.52
2622 2854 7.571025 TGTGTAGGGACTAGAAAAAGTTTCTT 58.429 34.615 8.44 0.00 44.14 2.52
2623 2855 8.050930 TGTGTAGGGACTAGAAAAAGTTTCTTT 58.949 33.333 8.44 0.00 44.14 2.52
2624 2856 8.900781 GTGTAGGGACTAGAAAAAGTTTCTTTT 58.099 33.333 8.44 0.00 44.14 2.27
2628 2860 9.562408 AGGGACTAGAAAAAGTTTCTTTTAGAG 57.438 33.333 8.44 2.99 36.02 2.43
2629 2861 9.557061 GGGACTAGAAAAAGTTTCTTTTAGAGA 57.443 33.333 8.44 0.00 0.00 3.10
2653 2885 4.479156 TTTTTACCAAATGGGAGGGACT 57.521 40.909 4.17 0.00 41.15 3.85
2654 2886 4.479156 TTTTACCAAATGGGAGGGACTT 57.521 40.909 4.17 0.00 41.15 3.01
2655 2887 4.479156 TTTACCAAATGGGAGGGACTTT 57.521 40.909 4.17 0.00 41.15 2.66
2656 2888 4.479156 TTACCAAATGGGAGGGACTTTT 57.521 40.909 4.17 0.00 41.15 2.27
2657 2889 3.344535 ACCAAATGGGAGGGACTTTTT 57.655 42.857 4.17 0.00 41.15 1.94
2658 2890 4.479156 ACCAAATGGGAGGGACTTTTTA 57.521 40.909 4.17 0.00 41.15 1.52
2659 2891 4.416516 ACCAAATGGGAGGGACTTTTTAG 58.583 43.478 4.17 0.00 41.15 1.85
2660 2892 3.769300 CCAAATGGGAGGGACTTTTTAGG 59.231 47.826 0.00 0.00 41.55 2.69
2661 2893 3.757947 AATGGGAGGGACTTTTTAGGG 57.242 47.619 0.00 0.00 41.55 3.53
2662 2894 2.444033 TGGGAGGGACTTTTTAGGGA 57.556 50.000 0.00 0.00 41.55 4.20
2663 2895 1.990327 TGGGAGGGACTTTTTAGGGAC 59.010 52.381 0.00 0.00 41.55 4.46
2664 2896 2.276391 GGGAGGGACTTTTTAGGGACT 58.724 52.381 0.00 0.00 41.55 3.85
2665 2897 3.181392 TGGGAGGGACTTTTTAGGGACTA 60.181 47.826 0.00 0.00 41.55 2.59
2666 2898 3.848377 GGGAGGGACTTTTTAGGGACTAA 59.152 47.826 0.00 0.00 45.97 2.24
2680 2912 5.970501 AGGGACTAAACTAGGTATTTGGG 57.029 43.478 0.00 0.00 36.02 4.12
2681 2913 5.606761 AGGGACTAAACTAGGTATTTGGGA 58.393 41.667 0.00 0.00 36.02 4.37
2682 2914 5.427806 AGGGACTAAACTAGGTATTTGGGAC 59.572 44.000 0.00 0.00 36.02 4.46
2683 2915 5.427806 GGGACTAAACTAGGTATTTGGGACT 59.572 44.000 0.00 0.00 0.00 3.85
2684 2916 6.612863 GGGACTAAACTAGGTATTTGGGACTA 59.387 42.308 0.00 0.00 0.00 2.59
2685 2917 7.126268 GGGACTAAACTAGGTATTTGGGACTAA 59.874 40.741 0.00 0.00 0.00 2.24
2686 2918 8.542926 GGACTAAACTAGGTATTTGGGACTAAA 58.457 37.037 0.00 0.00 0.00 1.85
2688 2920 9.901172 ACTAAACTAGGTATTTGGGACTAAATG 57.099 33.333 4.19 0.00 32.79 2.32
2691 2923 9.462606 AAACTAGGTATTTGGGACTAAATGAAG 57.537 33.333 4.19 0.34 32.79 3.02
2692 2924 8.388656 ACTAGGTATTTGGGACTAAATGAAGA 57.611 34.615 4.19 0.00 32.79 2.87
2693 2925 8.832735 ACTAGGTATTTGGGACTAAATGAAGAA 58.167 33.333 4.19 0.00 32.79 2.52
2694 2926 9.331282 CTAGGTATTTGGGACTAAATGAAGAAG 57.669 37.037 4.19 0.00 32.79 2.85
2695 2927 7.928873 AGGTATTTGGGACTAAATGAAGAAGA 58.071 34.615 4.19 0.00 32.79 2.87
2696 2928 7.829706 AGGTATTTGGGACTAAATGAAGAAGAC 59.170 37.037 4.19 0.00 32.79 3.01
2697 2929 7.829706 GGTATTTGGGACTAAATGAAGAAGACT 59.170 37.037 4.19 0.00 32.79 3.24
2698 2930 7.929941 ATTTGGGACTAAATGAAGAAGACTC 57.070 36.000 0.00 0.00 0.00 3.36
2699 2931 6.688073 TTGGGACTAAATGAAGAAGACTCT 57.312 37.500 0.00 0.00 0.00 3.24
2700 2932 6.287589 TGGGACTAAATGAAGAAGACTCTC 57.712 41.667 0.00 0.00 0.00 3.20
2701 2933 5.780282 TGGGACTAAATGAAGAAGACTCTCA 59.220 40.000 0.00 0.00 0.00 3.27
2702 2934 6.071108 TGGGACTAAATGAAGAAGACTCTCAG 60.071 42.308 0.00 0.00 0.00 3.35
2703 2935 6.337356 GGACTAAATGAAGAAGACTCTCAGG 58.663 44.000 0.00 0.00 0.00 3.86
2704 2936 6.153680 GGACTAAATGAAGAAGACTCTCAGGA 59.846 42.308 0.00 0.00 0.00 3.86
2705 2937 7.310113 GGACTAAATGAAGAAGACTCTCAGGAA 60.310 40.741 0.00 0.00 0.00 3.36
2706 2938 7.610865 ACTAAATGAAGAAGACTCTCAGGAAG 58.389 38.462 0.00 0.00 0.00 3.46
2707 2939 6.678568 AAATGAAGAAGACTCTCAGGAAGA 57.321 37.500 0.00 0.00 0.00 2.87
2745 2977 6.375945 AAATTGGGACTTTTTCAACAATGC 57.624 33.333 0.00 0.00 35.01 3.56
2746 2978 3.467374 TGGGACTTTTTCAACAATGCC 57.533 42.857 0.00 0.00 0.00 4.40
2747 2979 2.103941 TGGGACTTTTTCAACAATGCCC 59.896 45.455 0.00 0.00 0.00 5.36
2748 2980 2.549992 GGGACTTTTTCAACAATGCCCC 60.550 50.000 0.00 0.00 0.00 5.80
2749 2981 2.368548 GGACTTTTTCAACAATGCCCCT 59.631 45.455 0.00 0.00 0.00 4.79
2750 2982 3.554960 GGACTTTTTCAACAATGCCCCTC 60.555 47.826 0.00 0.00 0.00 4.30
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
2 3 0.322816 ACACTGCAGTTGCCATAGGG 60.323 55.000 18.94 4.96 41.18 3.53
3 4 2.401583 TACACTGCAGTTGCCATAGG 57.598 50.000 18.94 5.76 41.18 2.57
4 5 3.501828 TGTTTACACTGCAGTTGCCATAG 59.498 43.478 18.94 6.59 41.18 2.23
5 6 3.481453 TGTTTACACTGCAGTTGCCATA 58.519 40.909 18.94 2.04 41.18 2.74
6 7 2.305928 TGTTTACACTGCAGTTGCCAT 58.694 42.857 18.94 3.07 41.18 4.40
7 8 1.756430 TGTTTACACTGCAGTTGCCA 58.244 45.000 18.94 6.98 41.18 4.92
8 9 2.665519 CGATGTTTACACTGCAGTTGCC 60.666 50.000 18.94 4.24 41.18 4.52
9 10 2.032030 ACGATGTTTACACTGCAGTTGC 60.032 45.455 18.94 6.29 42.50 4.17
10 11 3.544651 CACGATGTTTACACTGCAGTTG 58.455 45.455 18.94 15.15 0.00 3.16
11 12 2.548057 CCACGATGTTTACACTGCAGTT 59.452 45.455 18.94 11.49 0.00 3.16
12 13 2.143122 CCACGATGTTTACACTGCAGT 58.857 47.619 15.25 15.25 0.00 4.40
13 14 1.135972 GCCACGATGTTTACACTGCAG 60.136 52.381 13.48 13.48 0.00 4.41
14 15 0.871722 GCCACGATGTTTACACTGCA 59.128 50.000 0.00 0.00 0.00 4.41
15 16 0.871722 TGCCACGATGTTTACACTGC 59.128 50.000 0.00 0.00 0.00 4.40
16 17 2.548057 AGTTGCCACGATGTTTACACTG 59.452 45.455 0.00 0.00 0.00 3.66
17 18 2.846193 AGTTGCCACGATGTTTACACT 58.154 42.857 0.00 0.00 0.00 3.55
18 19 3.250040 AGAAGTTGCCACGATGTTTACAC 59.750 43.478 0.00 0.00 0.00 2.90
19 20 3.249799 CAGAAGTTGCCACGATGTTTACA 59.750 43.478 0.00 0.00 0.00 2.41
20 21 3.364964 CCAGAAGTTGCCACGATGTTTAC 60.365 47.826 0.00 0.00 0.00 2.01
21 22 2.811431 CCAGAAGTTGCCACGATGTTTA 59.189 45.455 0.00 0.00 0.00 2.01
22 23 1.608590 CCAGAAGTTGCCACGATGTTT 59.391 47.619 0.00 0.00 0.00 2.83
23 24 1.238439 CCAGAAGTTGCCACGATGTT 58.762 50.000 0.00 0.00 0.00 2.71
24 25 0.108585 ACCAGAAGTTGCCACGATGT 59.891 50.000 0.00 0.00 0.00 3.06
25 26 2.093306 TACCAGAAGTTGCCACGATG 57.907 50.000 0.00 0.00 0.00 3.84
26 27 2.851263 TTACCAGAAGTTGCCACGAT 57.149 45.000 0.00 0.00 0.00 3.73
27 28 2.623878 TTTACCAGAAGTTGCCACGA 57.376 45.000 0.00 0.00 0.00 4.35
28 29 3.701532 TTTTTACCAGAAGTTGCCACG 57.298 42.857 0.00 0.00 0.00 4.94
47 48 7.484641 CCATGTTGATATGTTTCGACGATTTTT 59.515 33.333 0.00 0.00 33.42 1.94
48 49 6.966632 CCATGTTGATATGTTTCGACGATTTT 59.033 34.615 0.00 0.00 33.42 1.82
49 50 6.458206 CCCATGTTGATATGTTTCGACGATTT 60.458 38.462 0.00 0.00 33.42 2.17
50 51 5.007626 CCCATGTTGATATGTTTCGACGATT 59.992 40.000 0.00 0.00 33.42 3.34
51 52 4.511454 CCCATGTTGATATGTTTCGACGAT 59.489 41.667 0.00 0.00 33.42 3.73
52 53 3.868661 CCCATGTTGATATGTTTCGACGA 59.131 43.478 0.00 0.00 33.42 4.20
53 54 3.002246 CCCCATGTTGATATGTTTCGACG 59.998 47.826 0.00 0.00 33.42 5.12
54 55 3.945285 ACCCCATGTTGATATGTTTCGAC 59.055 43.478 0.00 0.00 0.00 4.20
55 56 4.080582 AGACCCCATGTTGATATGTTTCGA 60.081 41.667 0.00 0.00 0.00 3.71
56 57 4.199310 AGACCCCATGTTGATATGTTTCG 58.801 43.478 0.00 0.00 0.00 3.46
57 58 6.357367 ACTAGACCCCATGTTGATATGTTTC 58.643 40.000 0.00 0.00 0.00 2.78
58 59 6.327386 ACTAGACCCCATGTTGATATGTTT 57.673 37.500 0.00 0.00 0.00 2.83
59 60 5.975988 ACTAGACCCCATGTTGATATGTT 57.024 39.130 0.00 0.00 0.00 2.71
60 61 5.975988 AACTAGACCCCATGTTGATATGT 57.024 39.130 0.00 0.00 0.00 2.29
61 62 6.828273 TCAAAACTAGACCCCATGTTGATATG 59.172 38.462 0.00 0.00 0.00 1.78
62 63 6.969043 TCAAAACTAGACCCCATGTTGATAT 58.031 36.000 0.00 0.00 0.00 1.63
63 64 6.381498 TCAAAACTAGACCCCATGTTGATA 57.619 37.500 0.00 0.00 0.00 2.15
64 65 5.255397 TCAAAACTAGACCCCATGTTGAT 57.745 39.130 0.00 0.00 0.00 2.57
65 66 4.715534 TCAAAACTAGACCCCATGTTGA 57.284 40.909 0.00 0.00 0.00 3.18
66 67 5.070001 TCTTCAAAACTAGACCCCATGTTG 58.930 41.667 0.00 0.00 0.00 3.33
67 68 5.319043 TCTTCAAAACTAGACCCCATGTT 57.681 39.130 0.00 0.00 0.00 2.71
68 69 4.993705 TCTTCAAAACTAGACCCCATGT 57.006 40.909 0.00 0.00 0.00 3.21
69 70 5.749462 AGATCTTCAAAACTAGACCCCATG 58.251 41.667 0.00 0.00 0.00 3.66
70 71 5.395768 CGAGATCTTCAAAACTAGACCCCAT 60.396 44.000 0.00 0.00 0.00 4.00
71 72 4.081642 CGAGATCTTCAAAACTAGACCCCA 60.082 45.833 0.00 0.00 0.00 4.96
72 73 4.081586 ACGAGATCTTCAAAACTAGACCCC 60.082 45.833 0.00 0.00 0.00 4.95
73 74 5.074584 ACGAGATCTTCAAAACTAGACCC 57.925 43.478 0.00 0.00 0.00 4.46
74 75 4.794246 CGACGAGATCTTCAAAACTAGACC 59.206 45.833 0.00 0.00 0.00 3.85
75 76 5.629097 TCGACGAGATCTTCAAAACTAGAC 58.371 41.667 0.00 0.00 0.00 2.59
76 77 5.642491 TCTCGACGAGATCTTCAAAACTAGA 59.358 40.000 23.27 0.00 33.35 2.43
77 78 5.735427 GTCTCGACGAGATCTTCAAAACTAG 59.265 44.000 28.81 0.00 40.98 2.57
78 79 5.629097 GTCTCGACGAGATCTTCAAAACTA 58.371 41.667 28.81 0.33 40.98 2.24
79 80 4.477780 GTCTCGACGAGATCTTCAAAACT 58.522 43.478 28.81 0.00 40.98 2.66
80 81 4.809455 GTCTCGACGAGATCTTCAAAAC 57.191 45.455 28.81 10.84 40.98 2.43
94 95 3.777478 TCACCATTAAATCCGTCTCGAC 58.223 45.455 0.00 0.00 0.00 4.20
95 96 4.459390 TTCACCATTAAATCCGTCTCGA 57.541 40.909 0.00 0.00 0.00 4.04
96 97 5.321516 GTTTTCACCATTAAATCCGTCTCG 58.678 41.667 0.00 0.00 0.00 4.04
97 98 5.321516 CGTTTTCACCATTAAATCCGTCTC 58.678 41.667 0.00 0.00 0.00 3.36
98 99 4.155280 CCGTTTTCACCATTAAATCCGTCT 59.845 41.667 0.00 0.00 0.00 4.18
99 100 4.154556 TCCGTTTTCACCATTAAATCCGTC 59.845 41.667 0.00 0.00 0.00 4.79
100 101 4.073549 TCCGTTTTCACCATTAAATCCGT 58.926 39.130 0.00 0.00 0.00 4.69
101 102 4.688511 TCCGTTTTCACCATTAAATCCG 57.311 40.909 0.00 0.00 0.00 4.18
102 103 7.899178 AAAATCCGTTTTCACCATTAAATCC 57.101 32.000 0.00 0.00 32.14 3.01
104 105 9.990360 ACTAAAAATCCGTTTTCACCATTAAAT 57.010 25.926 0.00 0.00 40.07 1.40
105 106 9.819267 AACTAAAAATCCGTTTTCACCATTAAA 57.181 25.926 0.00 0.00 40.07 1.52
106 107 9.465985 GAACTAAAAATCCGTTTTCACCATTAA 57.534 29.630 0.00 0.00 40.07 1.40
107 108 7.804129 CGAACTAAAAATCCGTTTTCACCATTA 59.196 33.333 0.00 0.00 40.07 1.90
108 109 6.639279 CGAACTAAAAATCCGTTTTCACCATT 59.361 34.615 0.00 0.00 40.07 3.16
109 110 6.146898 CGAACTAAAAATCCGTTTTCACCAT 58.853 36.000 0.00 0.00 40.07 3.55
110 111 5.512473 CGAACTAAAAATCCGTTTTCACCA 58.488 37.500 0.00 0.00 40.07 4.17
111 112 4.380678 GCGAACTAAAAATCCGTTTTCACC 59.619 41.667 0.00 0.00 40.07 4.02
112 113 5.209977 AGCGAACTAAAAATCCGTTTTCAC 58.790 37.500 0.00 0.00 40.07 3.18
113 114 5.427036 AGCGAACTAAAAATCCGTTTTCA 57.573 34.783 0.00 0.00 40.07 2.69
114 115 6.742999 AAAGCGAACTAAAAATCCGTTTTC 57.257 33.333 0.00 0.00 40.07 2.29
115 116 7.528481 AAAAAGCGAACTAAAAATCCGTTTT 57.472 28.000 0.00 0.00 42.24 2.43
141 142 9.569167 GGCTTAAAAATGTTGTATCTCCTAAAC 57.431 33.333 0.00 0.00 0.00 2.01
142 143 8.455682 CGGCTTAAAAATGTTGTATCTCCTAAA 58.544 33.333 0.00 0.00 0.00 1.85
143 144 7.825270 TCGGCTTAAAAATGTTGTATCTCCTAA 59.175 33.333 0.00 0.00 0.00 2.69
144 145 7.332557 TCGGCTTAAAAATGTTGTATCTCCTA 58.667 34.615 0.00 0.00 0.00 2.94
145 146 6.177610 TCGGCTTAAAAATGTTGTATCTCCT 58.822 36.000 0.00 0.00 0.00 3.69
146 147 6.431198 TCGGCTTAAAAATGTTGTATCTCC 57.569 37.500 0.00 0.00 0.00 3.71
147 148 8.635983 GTTTTCGGCTTAAAAATGTTGTATCTC 58.364 33.333 0.00 0.00 30.53 2.75
148 149 7.597369 GGTTTTCGGCTTAAAAATGTTGTATCT 59.403 33.333 0.00 0.00 30.53 1.98
149 150 7.382759 TGGTTTTCGGCTTAAAAATGTTGTATC 59.617 33.333 0.00 0.00 30.53 2.24
150 151 7.210873 TGGTTTTCGGCTTAAAAATGTTGTAT 58.789 30.769 0.00 0.00 30.53 2.29
151 152 6.570692 TGGTTTTCGGCTTAAAAATGTTGTA 58.429 32.000 0.00 0.00 30.53 2.41
152 153 5.420409 TGGTTTTCGGCTTAAAAATGTTGT 58.580 33.333 0.00 0.00 30.53 3.32
153 154 5.975410 TGGTTTTCGGCTTAAAAATGTTG 57.025 34.783 0.00 0.00 30.53 3.33
154 155 6.986904 TTTGGTTTTCGGCTTAAAAATGTT 57.013 29.167 0.00 0.00 30.53 2.71
155 156 6.986904 TTTTGGTTTTCGGCTTAAAAATGT 57.013 29.167 0.00 0.00 30.53 2.71
183 184 9.067986 ACGTATGAATAGATGACATCAGTAGAA 57.932 33.333 17.57 0.00 0.00 2.10
184 185 8.507249 CACGTATGAATAGATGACATCAGTAGA 58.493 37.037 17.57 0.00 0.00 2.59
185 186 7.752686 CCACGTATGAATAGATGACATCAGTAG 59.247 40.741 17.57 2.12 0.00 2.57
186 187 7.593825 CCACGTATGAATAGATGACATCAGTA 58.406 38.462 17.57 2.75 0.00 2.74
187 188 6.450545 CCACGTATGAATAGATGACATCAGT 58.549 40.000 17.57 2.70 0.00 3.41
188 189 5.347093 GCCACGTATGAATAGATGACATCAG 59.653 44.000 17.57 0.66 0.00 2.90
189 190 5.221422 TGCCACGTATGAATAGATGACATCA 60.221 40.000 17.57 4.35 0.00 3.07
190 191 5.230182 TGCCACGTATGAATAGATGACATC 58.770 41.667 7.39 7.39 0.00 3.06
191 192 5.213891 TGCCACGTATGAATAGATGACAT 57.786 39.130 0.00 0.00 0.00 3.06
192 193 4.664150 TGCCACGTATGAATAGATGACA 57.336 40.909 0.00 0.00 0.00 3.58
193 194 5.984233 TTTGCCACGTATGAATAGATGAC 57.016 39.130 0.00 0.00 0.00 3.06
194 195 6.765512 TCATTTTGCCACGTATGAATAGATGA 59.234 34.615 0.00 0.00 0.00 2.92
195 196 6.958255 TCATTTTGCCACGTATGAATAGATG 58.042 36.000 0.00 0.00 0.00 2.90
196 197 6.767902 ACTCATTTTGCCACGTATGAATAGAT 59.232 34.615 0.00 0.00 0.00 1.98
197 198 6.112734 ACTCATTTTGCCACGTATGAATAGA 58.887 36.000 0.00 0.00 0.00 1.98
198 199 6.363577 ACTCATTTTGCCACGTATGAATAG 57.636 37.500 0.00 0.00 0.00 1.73
199 200 5.006261 CGACTCATTTTGCCACGTATGAATA 59.994 40.000 0.00 0.00 0.00 1.75
200 201 4.201812 CGACTCATTTTGCCACGTATGAAT 60.202 41.667 0.00 0.00 0.00 2.57
201 202 3.124466 CGACTCATTTTGCCACGTATGAA 59.876 43.478 0.00 0.00 0.00 2.57
202 203 2.670905 CGACTCATTTTGCCACGTATGA 59.329 45.455 0.00 0.00 0.00 2.15
203 204 2.415168 ACGACTCATTTTGCCACGTATG 59.585 45.455 0.00 0.00 0.00 2.39
204 205 2.415168 CACGACTCATTTTGCCACGTAT 59.585 45.455 0.00 0.00 0.00 3.06
205 206 1.795872 CACGACTCATTTTGCCACGTA 59.204 47.619 0.00 0.00 0.00 3.57
206 207 0.586319 CACGACTCATTTTGCCACGT 59.414 50.000 0.00 0.00 0.00 4.49
207 208 0.865111 TCACGACTCATTTTGCCACG 59.135 50.000 0.00 0.00 0.00 4.94
208 209 2.414559 CCATCACGACTCATTTTGCCAC 60.415 50.000 0.00 0.00 0.00 5.01
209 210 1.811965 CCATCACGACTCATTTTGCCA 59.188 47.619 0.00 0.00 0.00 4.92
210 211 2.083774 TCCATCACGACTCATTTTGCC 58.916 47.619 0.00 0.00 0.00 4.52
211 212 2.096496 CCTCCATCACGACTCATTTTGC 59.904 50.000 0.00 0.00 0.00 3.68
212 213 2.096496 GCCTCCATCACGACTCATTTTG 59.904 50.000 0.00 0.00 0.00 2.44
213 214 2.290260 TGCCTCCATCACGACTCATTTT 60.290 45.455 0.00 0.00 0.00 1.82
214 215 1.278985 TGCCTCCATCACGACTCATTT 59.721 47.619 0.00 0.00 0.00 2.32
215 216 0.904649 TGCCTCCATCACGACTCATT 59.095 50.000 0.00 0.00 0.00 2.57
216 217 1.126488 ATGCCTCCATCACGACTCAT 58.874 50.000 0.00 0.00 0.00 2.90
217 218 0.176449 CATGCCTCCATCACGACTCA 59.824 55.000 0.00 0.00 0.00 3.41
218 219 0.176680 ACATGCCTCCATCACGACTC 59.823 55.000 0.00 0.00 0.00 3.36
219 220 0.107993 CACATGCCTCCATCACGACT 60.108 55.000 0.00 0.00 0.00 4.18
220 221 0.108186 TCACATGCCTCCATCACGAC 60.108 55.000 0.00 0.00 0.00 4.34
221 222 0.176449 CTCACATGCCTCCATCACGA 59.824 55.000 0.00 0.00 0.00 4.35
222 223 1.434622 GCTCACATGCCTCCATCACG 61.435 60.000 0.00 0.00 0.00 4.35
223 224 1.434622 CGCTCACATGCCTCCATCAC 61.435 60.000 0.00 0.00 0.00 3.06
224 225 1.153309 CGCTCACATGCCTCCATCA 60.153 57.895 0.00 0.00 0.00 3.07
225 226 0.250209 ATCGCTCACATGCCTCCATC 60.250 55.000 0.00 0.00 0.00 3.51
226 227 0.534427 CATCGCTCACATGCCTCCAT 60.534 55.000 0.00 0.00 0.00 3.41
227 228 1.153309 CATCGCTCACATGCCTCCA 60.153 57.895 0.00 0.00 0.00 3.86
228 229 1.153289 ACATCGCTCACATGCCTCC 60.153 57.895 0.00 0.00 0.00 4.30
229 230 2.012237 CACATCGCTCACATGCCTC 58.988 57.895 0.00 0.00 0.00 4.70
230 231 2.110967 GCACATCGCTCACATGCCT 61.111 57.895 0.00 0.00 37.77 4.75
231 232 1.925415 TTGCACATCGCTCACATGCC 61.925 55.000 0.00 0.00 43.06 4.40
232 233 0.109643 TTTGCACATCGCTCACATGC 60.110 50.000 0.00 0.00 43.06 4.06
233 234 1.069091 TGTTTGCACATCGCTCACATG 60.069 47.619 0.00 0.00 43.06 3.21
234 235 1.237533 TGTTTGCACATCGCTCACAT 58.762 45.000 0.00 0.00 43.06 3.21
235 236 1.237533 ATGTTTGCACATCGCTCACA 58.762 45.000 0.00 0.00 39.69 3.58
245 246 0.380378 ACACGTGTGGATGTTTGCAC 59.620 50.000 22.71 0.00 43.88 4.57
246 247 0.380024 CACACGTGTGGATGTTTGCA 59.620 50.000 35.65 0.00 42.10 4.08
247 248 3.162499 CACACGTGTGGATGTTTGC 57.838 52.632 35.65 0.00 42.10 3.68
260 261 1.400500 GGAAATGTTAACGCCCACACG 60.400 52.381 0.26 0.00 39.50 4.49
261 262 1.609555 TGGAAATGTTAACGCCCACAC 59.390 47.619 0.26 0.00 0.00 3.82
262 263 1.982660 TGGAAATGTTAACGCCCACA 58.017 45.000 0.26 0.00 0.00 4.17
263 264 3.586100 AATGGAAATGTTAACGCCCAC 57.414 42.857 0.26 0.00 0.00 4.61
264 265 5.923733 ATTAATGGAAATGTTAACGCCCA 57.076 34.783 0.26 5.91 0.00 5.36
288 289 9.998106 ACTGTATTATTTTGCGAGGAGTTATAT 57.002 29.630 0.00 0.00 0.00 0.86
290 291 9.826574 TTACTGTATTATTTTGCGAGGAGTTAT 57.173 29.630 0.00 0.00 0.00 1.89
291 292 9.826574 ATTACTGTATTATTTTGCGAGGAGTTA 57.173 29.630 0.00 0.00 0.00 2.24
292 293 8.732746 ATTACTGTATTATTTTGCGAGGAGTT 57.267 30.769 0.00 0.00 0.00 3.01
293 294 9.826574 TTATTACTGTATTATTTTGCGAGGAGT 57.173 29.630 0.00 0.00 0.00 3.85
316 317 9.349145 GCCACGTTCAAGTTGTTAATTAATTAT 57.651 29.630 8.70 0.00 0.00 1.28
317 318 8.569641 AGCCACGTTCAAGTTGTTAATTAATTA 58.430 29.630 3.71 3.71 0.00 1.40
318 319 7.430441 AGCCACGTTCAAGTTGTTAATTAATT 58.570 30.769 5.89 5.89 0.00 1.40
319 320 6.977213 AGCCACGTTCAAGTTGTTAATTAAT 58.023 32.000 2.11 0.00 0.00 1.40
320 321 6.380095 AGCCACGTTCAAGTTGTTAATTAA 57.620 33.333 2.11 0.00 0.00 1.40
321 322 5.049267 GGAGCCACGTTCAAGTTGTTAATTA 60.049 40.000 2.11 0.00 0.00 1.40
322 323 4.261447 GGAGCCACGTTCAAGTTGTTAATT 60.261 41.667 2.11 0.00 0.00 1.40
323 324 3.252458 GGAGCCACGTTCAAGTTGTTAAT 59.748 43.478 2.11 0.00 0.00 1.40
324 325 2.614983 GGAGCCACGTTCAAGTTGTTAA 59.385 45.455 2.11 0.00 0.00 2.01
325 326 2.158871 AGGAGCCACGTTCAAGTTGTTA 60.159 45.455 2.11 0.00 0.00 2.41
326 327 1.021968 GGAGCCACGTTCAAGTTGTT 58.978 50.000 2.11 0.00 0.00 2.83
327 328 0.180406 AGGAGCCACGTTCAAGTTGT 59.820 50.000 2.11 0.00 0.00 3.32
328 329 0.588252 CAGGAGCCACGTTCAAGTTG 59.412 55.000 0.00 0.00 0.00 3.16
329 330 0.180406 ACAGGAGCCACGTTCAAGTT 59.820 50.000 0.00 0.00 0.00 2.66
330 331 1.045407 TACAGGAGCCACGTTCAAGT 58.955 50.000 0.00 0.00 0.00 3.16
331 332 2.163818 TTACAGGAGCCACGTTCAAG 57.836 50.000 0.00 0.00 0.00 3.02
332 333 2.623878 TTTACAGGAGCCACGTTCAA 57.376 45.000 0.00 0.00 0.00 2.69
333 334 2.851263 ATTTACAGGAGCCACGTTCA 57.149 45.000 0.00 0.00 0.00 3.18
334 335 5.220796 GGATTTATTTACAGGAGCCACGTTC 60.221 44.000 0.00 0.00 0.00 3.95
335 336 4.638865 GGATTTATTTACAGGAGCCACGTT 59.361 41.667 0.00 0.00 0.00 3.99
336 337 4.196971 GGATTTATTTACAGGAGCCACGT 58.803 43.478 0.00 0.00 0.00 4.49
337 338 4.196193 TGGATTTATTTACAGGAGCCACG 58.804 43.478 0.00 0.00 0.00 4.94
338 339 5.594317 ACATGGATTTATTTACAGGAGCCAC 59.406 40.000 0.00 0.00 0.00 5.01
339 340 5.765510 ACATGGATTTATTTACAGGAGCCA 58.234 37.500 0.00 0.00 0.00 4.75
340 341 6.998673 ACTACATGGATTTATTTACAGGAGCC 59.001 38.462 0.00 0.00 0.00 4.70
341 342 7.715249 TCACTACATGGATTTATTTACAGGAGC 59.285 37.037 0.00 0.00 0.00 4.70
342 343 9.784531 ATCACTACATGGATTTATTTACAGGAG 57.215 33.333 0.00 0.00 0.00 3.69
343 344 9.778741 GATCACTACATGGATTTATTTACAGGA 57.221 33.333 0.00 0.00 0.00 3.86
344 345 8.712363 CGATCACTACATGGATTTATTTACAGG 58.288 37.037 0.00 0.00 0.00 4.00
345 346 9.261180 ACGATCACTACATGGATTTATTTACAG 57.739 33.333 0.00 0.00 0.00 2.74
346 347 9.040939 CACGATCACTACATGGATTTATTTACA 57.959 33.333 0.00 0.00 0.00 2.41
347 348 8.009974 GCACGATCACTACATGGATTTATTTAC 58.990 37.037 0.00 0.00 0.00 2.01
369 372 0.523546 AGTTGACGCTATCTCGCACG 60.524 55.000 0.00 0.00 0.00 5.34
374 377 1.909376 TTCGCAGTTGACGCTATCTC 58.091 50.000 0.00 0.00 0.00 2.75
388 391 2.032634 GGCCTCACATCGTTTCGCA 61.033 57.895 0.00 0.00 0.00 5.10
391 394 2.750888 GGCGGCCTCACATCGTTTC 61.751 63.158 12.87 0.00 0.00 2.78
413 416 3.315142 ATCGCGGTGACACATGCCT 62.315 57.895 6.13 0.00 0.00 4.75
567 570 2.063266 TGTTTATTCGTGTCGGACAGC 58.937 47.619 11.83 5.92 0.00 4.40
742 748 1.548357 ATTCTCCTGCAGCTCACCGT 61.548 55.000 8.66 0.00 0.00 4.83
926 950 3.000819 TGGCAGTACCGTCCTGGG 61.001 66.667 0.00 0.00 44.64 4.45
929 953 3.001406 GGGTGGCAGTACCGTCCT 61.001 66.667 0.00 0.00 43.94 3.85
963 987 0.030369 GGCGCGGATATATAGTCGGG 59.970 60.000 8.83 15.39 38.34 5.14
1026 1050 0.814812 GCTGCCTCTGCTTCCAGATC 60.815 60.000 0.00 0.00 46.44 2.75
1271 1307 1.668419 GCTTGCTGATACGGATGGTT 58.332 50.000 0.00 0.00 0.00 3.67
1280 1316 2.586245 AGCTGCCGCTTGCTGATA 59.414 55.556 9.95 0.00 46.47 2.15
1330 1366 3.311110 AGATGTGACCGTGCCCGT 61.311 61.111 0.00 0.00 0.00 5.28
1333 1369 1.003839 TTCCAGATGTGACCGTGCC 60.004 57.895 0.00 0.00 0.00 5.01
1334 1370 0.037326 TCTTCCAGATGTGACCGTGC 60.037 55.000 0.00 0.00 0.00 5.34
1335 1371 2.001812 CTCTTCCAGATGTGACCGTG 57.998 55.000 0.00 0.00 0.00 4.94
1336 1372 0.247736 GCTCTTCCAGATGTGACCGT 59.752 55.000 0.00 0.00 0.00 4.83
1337 1373 0.803768 CGCTCTTCCAGATGTGACCG 60.804 60.000 0.00 0.00 0.00 4.79
1338 1374 0.460987 CCGCTCTTCCAGATGTGACC 60.461 60.000 0.00 0.00 0.00 4.02
1339 1375 0.460987 CCCGCTCTTCCAGATGTGAC 60.461 60.000 0.00 0.00 0.00 3.67
1340 1376 1.900351 CCCGCTCTTCCAGATGTGA 59.100 57.895 0.00 0.00 0.00 3.58
1341 1377 1.817099 GCCCGCTCTTCCAGATGTG 60.817 63.158 0.00 0.00 0.00 3.21
1342 1378 2.586792 GCCCGCTCTTCCAGATGT 59.413 61.111 0.00 0.00 0.00 3.06
1343 1379 2.587194 CGCCCGCTCTTCCAGATG 60.587 66.667 0.00 0.00 0.00 2.90
1344 1380 3.854669 CCGCCCGCTCTTCCAGAT 61.855 66.667 0.00 0.00 0.00 2.90
1381 1417 1.518352 CCGGCGTTCATGATGTCGA 60.518 57.895 20.14 0.00 45.00 4.20
1382 1418 2.525248 CCCGGCGTTCATGATGTCG 61.525 63.158 13.68 13.68 41.93 4.35
1406 1442 4.293648 TGCTCGACGTGGTGGTGG 62.294 66.667 0.00 0.00 0.00 4.61
1527 1567 4.632327 AGAAAGAGAGGAGAAACCCAAG 57.368 45.455 0.00 0.00 40.05 3.61
1539 1579 4.084118 CGAAGAAGCAACCAAGAAAGAGAG 60.084 45.833 0.00 0.00 0.00 3.20
1571 1611 5.267776 GCGTAAAAGCTGTGTTCTAACAAA 58.732 37.500 0.00 0.00 41.21 2.83
1572 1612 4.551217 CGCGTAAAAGCTGTGTTCTAACAA 60.551 41.667 0.00 0.00 36.37 2.83
1573 1613 3.060138 CGCGTAAAAGCTGTGTTCTAACA 60.060 43.478 0.00 0.00 33.78 2.41
1574 1614 3.466836 CGCGTAAAAGCTGTGTTCTAAC 58.533 45.455 0.00 0.00 34.40 2.34
1577 1617 0.865769 CCGCGTAAAAGCTGTGTTCT 59.134 50.000 4.92 0.00 34.40 3.01
1579 1619 1.281656 GCCGCGTAAAAGCTGTGTT 59.718 52.632 4.92 0.00 34.40 3.32
1592 1637 1.577328 AATGACACAGAAAGGCCGCG 61.577 55.000 0.00 0.00 0.00 6.46
1602 1647 4.916983 TCCAAACCAAAGAATGACACAG 57.083 40.909 0.00 0.00 0.00 3.66
1608 1653 4.022416 TCGTTGGATCCAAACCAAAGAATG 60.022 41.667 28.64 9.31 46.54 2.67
1643 1691 3.262405 GTGTATCACCACTTTCCCTACCA 59.738 47.826 0.00 0.00 32.50 3.25
1644 1692 3.262405 TGTGTATCACCACTTTCCCTACC 59.738 47.826 0.00 0.00 36.30 3.18
1657 1786 1.999735 CATCACCGTGGTGTGTATCAC 59.000 52.381 18.05 0.00 45.55 3.06
1658 1787 1.621317 ACATCACCGTGGTGTGTATCA 59.379 47.619 16.75 0.00 40.78 2.15
1659 1788 2.380084 ACATCACCGTGGTGTGTATC 57.620 50.000 16.75 0.00 40.78 2.24
1660 1789 3.965379 TTACATCACCGTGGTGTGTAT 57.035 42.857 24.82 2.99 42.53 2.29
1661 1790 3.747854 TTTACATCACCGTGGTGTGTA 57.252 42.857 24.82 19.61 42.53 2.90
1662 1791 2.623878 TTTACATCACCGTGGTGTGT 57.376 45.000 24.82 21.99 42.53 3.72
1663 1792 3.252215 ACAATTTACATCACCGTGGTGTG 59.748 43.478 24.82 16.53 42.53 3.82
1664 1793 3.482436 ACAATTTACATCACCGTGGTGT 58.518 40.909 20.85 20.85 45.01 4.16
1665 1794 5.614923 TTACAATTTACATCACCGTGGTG 57.385 39.130 12.91 12.91 46.64 4.17
1666 1795 5.766174 ACTTTACAATTTACATCACCGTGGT 59.234 36.000 0.00 0.00 0.00 4.16
1667 1796 6.249035 ACTTTACAATTTACATCACCGTGG 57.751 37.500 0.00 0.00 0.00 4.94
1668 1797 8.246908 TCTACTTTACAATTTACATCACCGTG 57.753 34.615 0.00 0.00 0.00 4.94
1669 1798 9.095065 GATCTACTTTACAATTTACATCACCGT 57.905 33.333 0.00 0.00 0.00 4.83
1670 1799 8.266682 CGATCTACTTTACAATTTACATCACCG 58.733 37.037 0.00 0.00 0.00 4.94
1696 1825 2.866762 GCCGTATGGACAGAAGAACATC 59.133 50.000 4.73 0.00 37.49 3.06
1762 1897 2.623416 TGTTCCACACACACACACAAAA 59.377 40.909 0.00 0.00 0.00 2.44
1773 1908 1.180907 TGCTTGCTTTGTTCCACACA 58.819 45.000 0.00 0.00 0.00 3.72
1774 1909 2.514205 ATGCTTGCTTTGTTCCACAC 57.486 45.000 0.00 0.00 0.00 3.82
1775 1910 3.540314 AAATGCTTGCTTTGTTCCACA 57.460 38.095 0.00 0.00 0.00 4.17
1776 1911 3.870419 TGAAAATGCTTGCTTTGTTCCAC 59.130 39.130 0.00 0.00 0.00 4.02
1777 1912 3.870419 GTGAAAATGCTTGCTTTGTTCCA 59.130 39.130 0.00 0.00 0.00 3.53
1778 1913 4.122046 AGTGAAAATGCTTGCTTTGTTCC 58.878 39.130 0.00 0.00 0.00 3.62
1786 1921 2.919229 CGGATCAAGTGAAAATGCTTGC 59.081 45.455 0.00 0.00 41.15 4.01
1822 1958 2.093106 CCTGGTAAGCTCGTCTGTACT 58.907 52.381 0.00 0.00 0.00 2.73
1864 2000 0.817654 GTTTGGCTATGGTCCCTTGC 59.182 55.000 0.00 0.00 0.00 4.01
1896 2058 4.319333 GCATATGGAATCGCTTCTGTTCTG 60.319 45.833 4.56 0.00 0.00 3.02
1901 2079 1.808945 GGGCATATGGAATCGCTTCTG 59.191 52.381 4.56 0.00 0.00 3.02
1902 2080 1.421268 TGGGCATATGGAATCGCTTCT 59.579 47.619 4.56 0.00 0.00 2.85
1903 2081 1.808945 CTGGGCATATGGAATCGCTTC 59.191 52.381 4.56 0.00 0.00 3.86
1904 2082 1.901591 CTGGGCATATGGAATCGCTT 58.098 50.000 4.56 0.00 0.00 4.68
1905 2083 0.607489 GCTGGGCATATGGAATCGCT 60.607 55.000 4.56 0.00 0.00 4.93
1906 2084 0.890542 TGCTGGGCATATGGAATCGC 60.891 55.000 4.56 0.00 31.71 4.58
1907 2085 1.538512 CTTGCTGGGCATATGGAATCG 59.461 52.381 4.56 0.00 38.76 3.34
1908 2086 1.891150 CCTTGCTGGGCATATGGAATC 59.109 52.381 4.56 0.00 38.76 2.52
1909 2087 2.005370 CCTTGCTGGGCATATGGAAT 57.995 50.000 4.56 0.00 38.76 3.01
1910 2088 3.518766 CCTTGCTGGGCATATGGAA 57.481 52.632 4.56 0.00 38.76 3.53
1930 2108 3.005684 TGGAACATAACTTGGCTTTGCAG 59.994 43.478 0.00 0.00 0.00 4.41
1931 2109 2.961741 TGGAACATAACTTGGCTTTGCA 59.038 40.909 0.00 0.00 0.00 4.08
1932 2110 3.005791 AGTGGAACATAACTTGGCTTTGC 59.994 43.478 0.00 0.00 44.52 3.68
1933 2111 4.853924 AGTGGAACATAACTTGGCTTTG 57.146 40.909 0.00 0.00 44.52 2.77
2234 2459 2.095919 GTGTGCAATCTTCGTTGGTACC 60.096 50.000 4.43 4.43 0.00 3.34
2235 2460 2.546368 TGTGTGCAATCTTCGTTGGTAC 59.454 45.455 0.00 0.00 0.00 3.34
2242 2467 6.317088 AGAAAATGTATGTGTGCAATCTTCG 58.683 36.000 0.00 0.00 0.00 3.79
2258 2483 1.314730 ACGTGGGCGAAAGAAAATGT 58.685 45.000 0.00 0.00 42.00 2.71
2270 2495 3.056328 GGGCTTCTGAACGTGGGC 61.056 66.667 0.00 0.00 0.00 5.36
2271 2496 1.073199 AAGGGCTTCTGAACGTGGG 59.927 57.895 0.00 0.00 0.00 4.61
2288 2513 5.415077 CCAAGAATGCCCATTTTTAATGCAA 59.585 36.000 0.00 0.00 35.30 4.08
2342 2567 7.332557 TCCTAAAACAATAGCGAATAAGGTCA 58.667 34.615 0.00 0.00 0.00 4.02
2376 2601 8.561738 TGTTAGGTGAGGTGATTTCTTAAATC 57.438 34.615 5.60 5.60 45.86 2.17
2377 2602 8.934023 TTGTTAGGTGAGGTGATTTCTTAAAT 57.066 30.769 0.00 0.00 0.00 1.40
2418 2650 8.121708 GTCCACTCTACTAGTATTTCTAACACG 58.878 40.741 2.33 0.00 35.76 4.49
2433 2665 3.706600 AGTCGAGAAGTCCACTCTACT 57.293 47.619 0.00 0.00 36.21 2.57
2487 2719 6.130298 TGTTGTAACTTCCTTGATTGTGTG 57.870 37.500 0.00 0.00 0.00 3.82
2501 2733 8.664211 TTTTTGTGTTTTCCTTTGTTGTAACT 57.336 26.923 0.00 0.00 0.00 2.24
2512 2744 7.147976 GCTCAGTATCATTTTTGTGTTTTCCT 58.852 34.615 0.00 0.00 0.00 3.36
2513 2745 6.922957 TGCTCAGTATCATTTTTGTGTTTTCC 59.077 34.615 0.00 0.00 0.00 3.13
2519 2751 7.274904 CCAAATCTGCTCAGTATCATTTTTGTG 59.725 37.037 0.00 0.00 0.00 3.33
2532 2764 3.881688 CACCCTAATCCAAATCTGCTCAG 59.118 47.826 0.00 0.00 0.00 3.35
2533 2765 3.371917 CCACCCTAATCCAAATCTGCTCA 60.372 47.826 0.00 0.00 0.00 4.26
2553 2785 0.618458 CCCTTAGTAGCACTTGGCCA 59.382 55.000 0.00 0.00 46.50 5.36
2566 2798 2.295070 CGGAAAACAAACACCCCCTTAG 59.705 50.000 0.00 0.00 0.00 2.18
2570 2802 0.103390 CACGGAAAACAAACACCCCC 59.897 55.000 0.00 0.00 0.00 5.40
2571 2803 1.104630 TCACGGAAAACAAACACCCC 58.895 50.000 0.00 0.00 0.00 4.95
2572 2804 1.746787 AGTCACGGAAAACAAACACCC 59.253 47.619 0.00 0.00 0.00 4.61
2573 2805 3.497297 AAGTCACGGAAAACAAACACC 57.503 42.857 0.00 0.00 0.00 4.16
2574 2806 5.832568 AAAAAGTCACGGAAAACAAACAC 57.167 34.783 0.00 0.00 0.00 3.32
2593 2825 8.584063 AACTTTTTCTAGTCCCTACACAAAAA 57.416 30.769 0.00 0.00 0.00 1.94
2594 2826 8.584063 AAACTTTTTCTAGTCCCTACACAAAA 57.416 30.769 0.00 0.00 0.00 2.44
2595 2827 8.050930 AGAAACTTTTTCTAGTCCCTACACAAA 58.949 33.333 0.00 0.00 0.00 2.83
2596 2828 7.571025 AGAAACTTTTTCTAGTCCCTACACAA 58.429 34.615 0.00 0.00 0.00 3.33
2597 2829 7.133133 AGAAACTTTTTCTAGTCCCTACACA 57.867 36.000 0.00 0.00 0.00 3.72
2598 2830 8.447924 AAAGAAACTTTTTCTAGTCCCTACAC 57.552 34.615 1.67 0.00 0.00 2.90
2602 2834 9.562408 CTCTAAAAGAAACTTTTTCTAGTCCCT 57.438 33.333 13.33 0.00 32.79 4.20
2603 2835 9.557061 TCTCTAAAAGAAACTTTTTCTAGTCCC 57.443 33.333 13.33 0.00 32.79 4.46
2632 2864 4.479156 AGTCCCTCCCATTTGGTAAAAA 57.521 40.909 0.00 0.00 34.77 1.94
2633 2865 4.479156 AAGTCCCTCCCATTTGGTAAAA 57.521 40.909 0.00 0.00 34.77 1.52
2634 2866 4.479156 AAAGTCCCTCCCATTTGGTAAA 57.521 40.909 0.00 0.00 34.77 2.01
2635 2867 4.479156 AAAAGTCCCTCCCATTTGGTAA 57.521 40.909 0.00 0.00 34.77 2.85
2636 2868 4.479156 AAAAAGTCCCTCCCATTTGGTA 57.521 40.909 0.00 0.00 34.77 3.25
2637 2869 3.344535 AAAAAGTCCCTCCCATTTGGT 57.655 42.857 0.00 0.00 34.77 3.67
2638 2870 3.769300 CCTAAAAAGTCCCTCCCATTTGG 59.231 47.826 0.00 0.00 0.00 3.28
2639 2871 3.769300 CCCTAAAAAGTCCCTCCCATTTG 59.231 47.826 0.00 0.00 0.00 2.32
2640 2872 3.665618 TCCCTAAAAAGTCCCTCCCATTT 59.334 43.478 0.00 0.00 0.00 2.32
2641 2873 3.011369 GTCCCTAAAAAGTCCCTCCCATT 59.989 47.826 0.00 0.00 0.00 3.16
2642 2874 2.581246 GTCCCTAAAAAGTCCCTCCCAT 59.419 50.000 0.00 0.00 0.00 4.00
2643 2875 1.990327 GTCCCTAAAAAGTCCCTCCCA 59.010 52.381 0.00 0.00 0.00 4.37
2644 2876 2.276391 AGTCCCTAAAAAGTCCCTCCC 58.724 52.381 0.00 0.00 0.00 4.30
2645 2877 5.013913 AGTTTAGTCCCTAAAAAGTCCCTCC 59.986 44.000 0.00 0.00 37.62 4.30
2646 2878 6.124316 AGTTTAGTCCCTAAAAAGTCCCTC 57.876 41.667 0.00 0.00 37.62 4.30
2647 2879 6.215023 CCTAGTTTAGTCCCTAAAAAGTCCCT 59.785 42.308 0.00 0.00 37.62 4.20
2648 2880 6.013032 ACCTAGTTTAGTCCCTAAAAAGTCCC 60.013 42.308 0.00 0.00 37.62 4.46
2649 2881 7.013823 ACCTAGTTTAGTCCCTAAAAAGTCC 57.986 40.000 0.00 0.00 37.62 3.85
2653 2885 9.743581 CCAAATACCTAGTTTAGTCCCTAAAAA 57.256 33.333 0.00 0.00 37.62 1.94
2654 2886 8.330993 CCCAAATACCTAGTTTAGTCCCTAAAA 58.669 37.037 0.00 0.00 37.62 1.52
2655 2887 7.683754 TCCCAAATACCTAGTTTAGTCCCTAAA 59.316 37.037 0.00 0.00 34.12 1.85
2656 2888 7.126268 GTCCCAAATACCTAGTTTAGTCCCTAA 59.874 40.741 0.00 0.00 0.00 2.69
2657 2889 6.612863 GTCCCAAATACCTAGTTTAGTCCCTA 59.387 42.308 0.00 0.00 0.00 3.53
2658 2890 5.427806 GTCCCAAATACCTAGTTTAGTCCCT 59.572 44.000 0.00 0.00 0.00 4.20
2659 2891 5.427806 AGTCCCAAATACCTAGTTTAGTCCC 59.572 44.000 0.00 0.00 0.00 4.46
2660 2892 6.556974 AGTCCCAAATACCTAGTTTAGTCC 57.443 41.667 0.00 0.00 0.00 3.85
2662 2894 9.901172 CATTTAGTCCCAAATACCTAGTTTAGT 57.099 33.333 0.00 0.00 0.00 2.24
2665 2897 9.462606 CTTCATTTAGTCCCAAATACCTAGTTT 57.537 33.333 0.00 0.00 0.00 2.66
2666 2898 8.832735 TCTTCATTTAGTCCCAAATACCTAGTT 58.167 33.333 0.00 0.00 0.00 2.24
2667 2899 8.388656 TCTTCATTTAGTCCCAAATACCTAGT 57.611 34.615 0.00 0.00 0.00 2.57
2668 2900 9.331282 CTTCTTCATTTAGTCCCAAATACCTAG 57.669 37.037 0.00 0.00 0.00 3.02
2669 2901 9.053472 TCTTCTTCATTTAGTCCCAAATACCTA 57.947 33.333 0.00 0.00 0.00 3.08
2670 2902 7.829706 GTCTTCTTCATTTAGTCCCAAATACCT 59.170 37.037 0.00 0.00 0.00 3.08
2671 2903 7.829706 AGTCTTCTTCATTTAGTCCCAAATACC 59.170 37.037 0.00 0.00 0.00 2.73
2672 2904 8.794335 AGTCTTCTTCATTTAGTCCCAAATAC 57.206 34.615 0.00 0.00 0.00 1.89
2673 2905 8.826765 AGAGTCTTCTTCATTTAGTCCCAAATA 58.173 33.333 0.00 0.00 0.00 1.40
2674 2906 7.694093 AGAGTCTTCTTCATTTAGTCCCAAAT 58.306 34.615 0.00 0.00 0.00 2.32
2675 2907 7.079451 AGAGTCTTCTTCATTTAGTCCCAAA 57.921 36.000 0.00 0.00 0.00 3.28
2676 2908 6.270000 TGAGAGTCTTCTTCATTTAGTCCCAA 59.730 38.462 0.00 0.00 32.53 4.12
2677 2909 5.780282 TGAGAGTCTTCTTCATTTAGTCCCA 59.220 40.000 0.00 0.00 32.53 4.37
2678 2910 6.287589 TGAGAGTCTTCTTCATTTAGTCCC 57.712 41.667 0.00 0.00 32.53 4.46
2679 2911 6.153680 TCCTGAGAGTCTTCTTCATTTAGTCC 59.846 42.308 0.00 0.00 32.53 3.85
2680 2912 7.164230 TCCTGAGAGTCTTCTTCATTTAGTC 57.836 40.000 0.00 0.00 32.53 2.59
2681 2913 7.453126 TCTTCCTGAGAGTCTTCTTCATTTAGT 59.547 37.037 0.00 0.00 32.53 2.24
2682 2914 7.835822 TCTTCCTGAGAGTCTTCTTCATTTAG 58.164 38.462 0.00 0.00 32.53 1.85
2683 2915 7.782897 TCTTCCTGAGAGTCTTCTTCATTTA 57.217 36.000 0.00 0.00 32.53 1.40
2684 2916 6.678568 TCTTCCTGAGAGTCTTCTTCATTT 57.321 37.500 0.00 0.00 32.53 2.32
2685 2917 6.284891 CTCTTCCTGAGAGTCTTCTTCATT 57.715 41.667 0.00 0.00 45.69 2.57
2686 2918 5.920193 CTCTTCCTGAGAGTCTTCTTCAT 57.080 43.478 0.00 0.00 45.69 2.57
2720 2952 7.257003 GCATTGTTGAAAAAGTCCCAATTTTT 58.743 30.769 0.00 0.00 41.32 1.94
2721 2953 6.183360 GGCATTGTTGAAAAAGTCCCAATTTT 60.183 34.615 0.00 0.00 29.10 1.82
2722 2954 5.299028 GGCATTGTTGAAAAAGTCCCAATTT 59.701 36.000 0.00 0.00 29.10 1.82
2723 2955 4.821260 GGCATTGTTGAAAAAGTCCCAATT 59.179 37.500 0.00 0.00 29.10 2.32
2724 2956 4.388485 GGCATTGTTGAAAAAGTCCCAAT 58.612 39.130 0.00 0.00 30.75 3.16
2725 2957 3.432890 GGGCATTGTTGAAAAAGTCCCAA 60.433 43.478 3.40 0.00 0.00 4.12
2726 2958 2.103941 GGGCATTGTTGAAAAAGTCCCA 59.896 45.455 3.40 0.00 0.00 4.37
2727 2959 2.549992 GGGGCATTGTTGAAAAAGTCCC 60.550 50.000 0.00 0.00 0.00 4.46
2728 2960 2.368548 AGGGGCATTGTTGAAAAAGTCC 59.631 45.455 0.00 0.00 0.00 3.85
2729 2961 3.653344 GAGGGGCATTGTTGAAAAAGTC 58.347 45.455 0.00 0.00 0.00 3.01
2730 2962 3.751479 GAGGGGCATTGTTGAAAAAGT 57.249 42.857 0.00 0.00 0.00 2.66


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.