Multiple sequence alignment - TraesCS3B01G353100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G353100 chr3B 100.000 3840 0 0 1 3840 562778446 562774607 0.000000e+00 7092.0
1 TraesCS3B01G353100 chr3B 83.495 206 29 5 3638 3840 212698638 212698435 1.820000e-43 187.0
2 TraesCS3B01G353100 chr3D 92.884 2670 136 21 826 3469 430361035 430358394 0.000000e+00 3829.0
3 TraesCS3B01G353100 chr3D 90.169 356 25 6 1 347 430370395 430370041 4.520000e-124 455.0
4 TraesCS3B01G353100 chr3D 90.854 328 28 2 344 670 2993986 2993660 4.550000e-119 438.0
5 TraesCS3B01G353100 chr3D 87.252 353 43 2 345 696 27679238 27678887 5.980000e-108 401.0
6 TraesCS3B01G353100 chr3D 91.713 181 11 1 3534 3714 430358396 430358220 8.240000e-62 248.0
7 TraesCS3B01G353100 chr3D 83.415 205 30 4 3638 3840 381192120 381191918 1.820000e-43 187.0
8 TraesCS3B01G353100 chr3D 89.630 135 9 4 697 828 430369385 430369253 2.370000e-37 167.0
9 TraesCS3B01G353100 chr3A 93.257 2432 99 27 697 3112 568446637 568444255 0.000000e+00 3522.0
10 TraesCS3B01G353100 chr3A 89.096 376 33 7 3099 3469 568418489 568418117 9.720000e-126 460.0
11 TraesCS3B01G353100 chr3A 90.365 301 19 5 1 292 568447052 568446753 1.670000e-103 387.0
12 TraesCS3B01G353100 chr3A 89.362 188 14 3 3534 3721 568418119 568417938 8.300000e-57 231.0
13 TraesCS3B01G353100 chr6B 87.288 354 43 2 344 696 715885973 715885621 1.660000e-108 403.0
14 TraesCS3B01G353100 chr4B 87.288 354 41 4 344 695 657436470 657436821 5.980000e-108 401.0
15 TraesCS3B01G353100 chr4B 83.495 206 29 5 3638 3840 599316320 599316117 1.820000e-43 187.0
16 TraesCS3B01G353100 chr7B 86.275 357 45 3 346 700 720307991 720307637 6.020000e-103 385.0
17 TraesCS3B01G353100 chr5A 86.705 346 44 2 355 699 10901129 10901473 2.160000e-102 383.0
18 TraesCS3B01G353100 chr6D 85.596 361 48 4 345 704 449217788 449218145 3.620000e-100 375.0
19 TraesCS3B01G353100 chr6D 85.479 365 43 8 344 704 20491820 20491462 4.690000e-99 372.0
20 TraesCS3B01G353100 chr6D 83.495 206 29 5 3638 3840 455872082 455872285 1.820000e-43 187.0
21 TraesCS3B01G353100 chr6D 83.495 206 29 5 3638 3840 470337014 470336811 1.820000e-43 187.0
22 TraesCS3B01G353100 chr4D 85.440 364 45 6 346 706 6562073 6562431 4.690000e-99 372.0
23 TraesCS3B01G353100 chr2D 83.824 204 32 1 3638 3840 343929395 343929192 3.910000e-45 193.0
24 TraesCS3B01G353100 chr2D 100.000 28 0 0 104 131 10317318 10317291 7.000000e-03 52.8
25 TraesCS3B01G353100 chr5B 83.495 206 29 5 3638 3840 58747076 58746873 1.820000e-43 187.0
26 TraesCS3B01G353100 chr1B 83.495 206 29 5 3638 3840 399505888 399506091 1.820000e-43 187.0
27 TraesCS3B01G353100 chr1B 83.495 206 29 5 3638 3840 399761912 399761709 1.820000e-43 187.0
28 TraesCS3B01G353100 chr7D 100.000 28 0 0 104 131 401115040 401115067 7.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G353100 chr3B 562774607 562778446 3839 True 7092.0 7092 100.0000 1 3840 1 chr3B.!!$R2 3839
1 TraesCS3B01G353100 chr3D 430358220 430361035 2815 True 2038.5 3829 92.2985 826 3714 2 chr3D.!!$R4 2888
2 TraesCS3B01G353100 chr3D 430369253 430370395 1142 True 311.0 455 89.8995 1 828 2 chr3D.!!$R5 827
3 TraesCS3B01G353100 chr3A 568444255 568447052 2797 True 1954.5 3522 91.8110 1 3112 2 chr3A.!!$R2 3111
4 TraesCS3B01G353100 chr3A 568417938 568418489 551 True 345.5 460 89.2290 3099 3721 2 chr3A.!!$R1 622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
464 474 0.105593 ATACGAGGAGCTCCGTACGA 59.894 55.0 36.43 26.1 42.89 3.43 F
589 1037 0.177604 CCAAACTTTGCAAGCACCCA 59.822 50.0 0.00 0.0 0.00 4.51 F
1383 1847 0.035317 TGCTTCAAGACGACATGCCT 59.965 50.0 0.00 0.0 0.00 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1297 1761 0.606604 TCACAGAAGGGCGTTAGTCC 59.393 55.000 0.0 0.00 44.17 3.85 R
1587 2051 1.077212 GCTGGTGGATGACTGGCAT 60.077 57.895 0.0 0.00 40.77 4.40 R
2945 3418 1.270550 ACTAGCAACATGTGGCTTTGC 59.729 47.619 32.0 20.94 44.93 3.68 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 59 2.148768 CCACTAACCGTTTGGGAGTTC 58.851 52.381 0.00 0.00 40.75 3.01
74 75 4.501058 GGGAGTTCGGCTAAGTATGGTTAG 60.501 50.000 0.00 0.00 33.74 2.34
107 109 3.433740 GCTCCTCTAACCAATTACAGGGG 60.434 52.174 0.00 0.00 31.61 4.79
113 115 0.182775 ACCAATTACAGGGGATCGGC 59.817 55.000 0.00 0.00 0.00 5.54
137 139 5.606348 AGAGTTGCTCTAAGGGATACTTG 57.394 43.478 0.00 0.00 39.28 3.16
143 145 2.036089 CTCTAAGGGATACTTGGTCGGC 59.964 54.545 0.00 0.00 40.37 5.54
225 231 7.565029 TGAGATGTCATAATCTTGGAAGACCTA 59.435 37.037 0.00 0.00 37.03 3.08
257 267 1.376609 GGCAAGTCCACCGCCTTATG 61.377 60.000 0.00 0.00 42.78 1.90
264 274 0.179032 CCACCGCCTTATGCCACATA 60.179 55.000 0.00 0.00 36.24 2.29
276 286 3.311167 TGCCACATATATTTGGGTGCT 57.689 42.857 17.66 0.00 33.01 4.40
280 290 4.766891 GCCACATATATTTGGGTGCTATGT 59.233 41.667 17.66 0.00 34.28 2.29
285 295 8.579006 CACATATATTTGGGTGCTATGTGAAAT 58.421 33.333 13.15 0.00 46.40 2.17
286 296 8.579006 ACATATATTTGGGTGCTATGTGAAATG 58.421 33.333 0.00 0.00 33.11 2.32
292 302 5.263599 TGGGTGCTATGTGAAATGAAGAAT 58.736 37.500 0.00 0.00 0.00 2.40
293 303 5.716228 TGGGTGCTATGTGAAATGAAGAATT 59.284 36.000 0.00 0.00 0.00 2.17
299 309 8.817100 TGCTATGTGAAATGAAGAATTACGTAG 58.183 33.333 0.00 0.00 33.30 3.51
331 341 2.582052 TCGGTTTCAAGCCATCAAAGT 58.418 42.857 0.00 0.00 0.00 2.66
338 348 6.096001 GGTTTCAAGCCATCAAAGTCATATCT 59.904 38.462 0.00 0.00 0.00 1.98
341 351 6.286758 TCAAGCCATCAAAGTCATATCTCTC 58.713 40.000 0.00 0.00 0.00 3.20
347 357 6.203145 CCATCAAAGTCATATCTCTCTGCAAG 59.797 42.308 0.00 0.00 0.00 4.01
349 359 6.939622 TCAAAGTCATATCTCTCTGCAAGAA 58.060 36.000 0.00 0.00 46.34 2.52
350 360 7.389232 TCAAAGTCATATCTCTCTGCAAGAAA 58.611 34.615 0.00 0.00 46.34 2.52
351 361 7.879677 TCAAAGTCATATCTCTCTGCAAGAAAA 59.120 33.333 0.00 0.00 46.34 2.29
352 362 8.675504 CAAAGTCATATCTCTCTGCAAGAAAAT 58.324 33.333 0.00 0.00 46.34 1.82
353 363 9.896645 AAAGTCATATCTCTCTGCAAGAAAATA 57.103 29.630 0.00 0.00 46.34 1.40
357 367 9.650539 TCATATCTCTCTGCAAGAAAATATAGC 57.349 33.333 0.00 0.00 46.34 2.97
358 368 9.433153 CATATCTCTCTGCAAGAAAATATAGCA 57.567 33.333 0.00 0.00 46.34 3.49
360 370 8.743085 ATCTCTCTGCAAGAAAATATAGCAAA 57.257 30.769 0.00 0.00 46.34 3.68
361 371 8.565896 TCTCTCTGCAAGAAAATATAGCAAAA 57.434 30.769 0.00 0.00 46.34 2.44
362 372 9.182214 TCTCTCTGCAAGAAAATATAGCAAAAT 57.818 29.630 0.00 0.00 46.34 1.82
397 407 8.750515 AAAAATTGAAACTTTGTGGGAATGAT 57.249 26.923 0.00 0.00 0.00 2.45
398 408 9.844257 AAAAATTGAAACTTTGTGGGAATGATA 57.156 25.926 0.00 0.00 0.00 2.15
399 409 9.844257 AAAATTGAAACTTTGTGGGAATGATAA 57.156 25.926 0.00 0.00 0.00 1.75
401 411 8.831715 ATTGAAACTTTGTGGGAATGATAAAC 57.168 30.769 0.00 0.00 0.00 2.01
403 413 7.432869 TGAAACTTTGTGGGAATGATAAACAG 58.567 34.615 0.00 0.00 0.00 3.16
405 415 4.832266 ACTTTGTGGGAATGATAAACAGCA 59.168 37.500 0.00 0.00 0.00 4.41
406 416 5.304101 ACTTTGTGGGAATGATAAACAGCAA 59.696 36.000 0.00 0.00 0.00 3.91
407 417 5.798125 TTGTGGGAATGATAAACAGCAAA 57.202 34.783 0.00 0.00 0.00 3.68
409 419 5.722263 TGTGGGAATGATAAACAGCAAATG 58.278 37.500 0.00 0.00 0.00 2.32
423 433 6.331369 ACAGCAAATGTTATAAGTGCTTGT 57.669 33.333 9.16 8.62 42.77 3.16
424 434 7.447374 ACAGCAAATGTTATAAGTGCTTGTA 57.553 32.000 9.16 0.00 42.77 2.41
425 435 7.881142 ACAGCAAATGTTATAAGTGCTTGTAA 58.119 30.769 9.16 0.00 42.77 2.41
444 454 7.995463 TTGTAAAGTTTGGTGCTCAAATAAC 57.005 32.000 0.00 6.29 45.79 1.89
445 455 7.101652 TGTAAAGTTTGGTGCTCAAATAACA 57.898 32.000 0.00 8.06 45.79 2.41
446 456 7.721402 TGTAAAGTTTGGTGCTCAAATAACAT 58.279 30.769 0.00 0.09 45.79 2.71
447 457 8.851145 TGTAAAGTTTGGTGCTCAAATAACATA 58.149 29.630 0.00 0.00 45.79 2.29
448 458 9.124807 GTAAAGTTTGGTGCTCAAATAACATAC 57.875 33.333 0.00 5.86 45.79 2.39
449 459 5.938322 AGTTTGGTGCTCAAATAACATACG 58.062 37.500 8.55 0.00 45.79 3.06
450 460 5.703592 AGTTTGGTGCTCAAATAACATACGA 59.296 36.000 8.55 0.00 45.79 3.43
453 463 4.081365 TGGTGCTCAAATAACATACGAGGA 60.081 41.667 0.00 0.00 0.00 3.71
455 465 4.025647 GTGCTCAAATAACATACGAGGAGC 60.026 45.833 0.00 0.00 44.95 4.70
456 466 4.141937 TGCTCAAATAACATACGAGGAGCT 60.142 41.667 11.05 0.00 44.97 4.09
457 467 4.446051 GCTCAAATAACATACGAGGAGCTC 59.554 45.833 4.71 4.71 42.30 4.09
458 468 4.945246 TCAAATAACATACGAGGAGCTCC 58.055 43.478 26.22 26.22 0.00 4.70
459 469 3.644884 AATAACATACGAGGAGCTCCG 57.355 47.619 26.95 18.19 42.08 4.63
461 471 2.048444 AACATACGAGGAGCTCCGTA 57.952 50.000 26.95 24.10 43.97 4.02
462 472 1.307097 ACATACGAGGAGCTCCGTAC 58.693 55.000 26.95 19.80 42.89 3.67
463 473 0.235144 CATACGAGGAGCTCCGTACG 59.765 60.000 31.87 31.87 42.89 3.67
464 474 0.105593 ATACGAGGAGCTCCGTACGA 59.894 55.000 36.43 26.10 42.89 3.43
468 898 1.401931 CGAGGAGCTCCGTACGAAAAA 60.402 52.381 30.92 0.00 42.08 1.94
471 901 1.991264 GGAGCTCCGTACGAAAAAGAC 59.009 52.381 19.06 6.46 0.00 3.01
478 908 6.203338 AGCTCCGTACGAAAAAGACAAAATTA 59.797 34.615 18.76 0.00 0.00 1.40
482 912 8.180267 TCCGTACGAAAAAGACAAAATTACAAA 58.820 29.630 18.76 0.00 0.00 2.83
488 918 9.356929 CGAAAAAGACAAAATTACAAAATCTGC 57.643 29.630 0.00 0.00 0.00 4.26
491 921 9.598517 AAAAGACAAAATTACAAAATCTGCTCA 57.401 25.926 0.00 0.00 0.00 4.26
496 944 8.819974 ACAAAATTACAAAATCTGCTCAAACAG 58.180 29.630 0.00 0.00 39.12 3.16
498 946 7.935338 AATTACAAAATCTGCTCAAACAGTG 57.065 32.000 0.00 0.00 38.84 3.66
501 949 4.202182 ACAAAATCTGCTCAAACAGTGCAT 60.202 37.500 0.00 0.00 44.81 3.96
503 951 4.595762 AATCTGCTCAAACAGTGCATTT 57.404 36.364 0.00 0.00 44.81 2.32
510 958 8.306038 TCTGCTCAAACAGTGCATTTATATTTT 58.694 29.630 0.00 0.00 44.81 1.82
513 961 8.375465 GCTCAAACAGTGCATTTATATTTTGAC 58.625 33.333 0.00 0.00 36.75 3.18
514 962 9.630098 CTCAAACAGTGCATTTATATTTTGACT 57.370 29.630 0.00 0.00 30.63 3.41
555 1003 1.250328 TTTTGTACGGAGCTCCTCGA 58.750 50.000 29.73 16.39 0.00 4.04
556 1004 1.250328 TTTGTACGGAGCTCCTCGAA 58.750 50.000 29.73 20.61 0.00 3.71
557 1005 1.471119 TTGTACGGAGCTCCTCGAAT 58.529 50.000 29.73 12.53 0.00 3.34
559 1007 0.739561 GTACGGAGCTCCTCGAATGT 59.260 55.000 29.73 20.46 0.00 2.71
561 1009 1.471119 ACGGAGCTCCTCGAATGTTA 58.529 50.000 29.73 0.00 0.00 2.41
562 1010 2.032620 ACGGAGCTCCTCGAATGTTAT 58.967 47.619 29.73 0.00 0.00 1.89
564 1012 3.118738 ACGGAGCTCCTCGAATGTTATTT 60.119 43.478 29.73 0.00 0.00 1.40
565 1013 3.246226 CGGAGCTCCTCGAATGTTATTTG 59.754 47.826 29.73 5.67 0.00 2.32
566 1014 4.442706 GGAGCTCCTCGAATGTTATTTGA 58.557 43.478 26.25 0.00 0.00 2.69
567 1015 4.271291 GGAGCTCCTCGAATGTTATTTGAC 59.729 45.833 26.25 0.00 0.00 3.18
568 1016 4.192317 AGCTCCTCGAATGTTATTTGACC 58.808 43.478 0.00 0.00 0.00 4.02
569 1017 3.938963 GCTCCTCGAATGTTATTTGACCA 59.061 43.478 0.00 0.00 0.00 4.02
570 1018 4.201822 GCTCCTCGAATGTTATTTGACCAC 60.202 45.833 0.00 0.00 0.00 4.16
571 1019 4.258543 TCCTCGAATGTTATTTGACCACC 58.741 43.478 0.00 0.00 0.00 4.61
572 1020 4.006989 CCTCGAATGTTATTTGACCACCA 58.993 43.478 0.00 0.00 0.00 4.17
573 1021 4.457603 CCTCGAATGTTATTTGACCACCAA 59.542 41.667 0.00 0.00 0.00 3.67
575 1023 5.764131 TCGAATGTTATTTGACCACCAAAC 58.236 37.500 0.00 0.00 46.41 2.93
576 1024 5.533154 TCGAATGTTATTTGACCACCAAACT 59.467 36.000 0.00 0.00 46.41 2.66
577 1025 6.039941 TCGAATGTTATTTGACCACCAAACTT 59.960 34.615 0.00 0.00 46.41 2.66
578 1026 6.699642 CGAATGTTATTTGACCACCAAACTTT 59.300 34.615 0.00 0.00 46.41 2.66
579 1027 7.306515 CGAATGTTATTTGACCACCAAACTTTG 60.307 37.037 0.00 0.00 46.41 2.77
580 1028 5.112686 TGTTATTTGACCACCAAACTTTGC 58.887 37.500 0.00 0.00 46.41 3.68
581 1029 3.902881 ATTTGACCACCAAACTTTGCA 57.097 38.095 0.00 0.00 46.41 4.08
582 1030 3.685139 TTTGACCACCAAACTTTGCAA 57.315 38.095 0.00 0.00 39.65 4.08
583 1031 2.957491 TGACCACCAAACTTTGCAAG 57.043 45.000 0.00 0.00 0.00 4.01
584 1032 1.134848 TGACCACCAAACTTTGCAAGC 60.135 47.619 0.00 0.00 0.00 4.01
585 1033 0.901124 ACCACCAAACTTTGCAAGCA 59.099 45.000 0.00 0.00 0.00 3.91
586 1034 1.289276 CCACCAAACTTTGCAAGCAC 58.711 50.000 0.00 0.00 0.00 4.40
587 1035 1.289276 CACCAAACTTTGCAAGCACC 58.711 50.000 0.00 0.00 0.00 5.01
588 1036 0.177836 ACCAAACTTTGCAAGCACCC 59.822 50.000 0.00 0.00 0.00 4.61
589 1037 0.177604 CCAAACTTTGCAAGCACCCA 59.822 50.000 0.00 0.00 0.00 4.51
590 1038 1.202675 CCAAACTTTGCAAGCACCCAT 60.203 47.619 0.00 0.00 0.00 4.00
591 1039 2.036992 CCAAACTTTGCAAGCACCCATA 59.963 45.455 0.00 0.00 0.00 2.74
592 1040 3.494048 CCAAACTTTGCAAGCACCCATAA 60.494 43.478 0.00 0.00 0.00 1.90
593 1041 3.385193 AACTTTGCAAGCACCCATAAC 57.615 42.857 0.00 0.00 0.00 1.89
594 1042 2.315176 ACTTTGCAAGCACCCATAACA 58.685 42.857 0.00 0.00 0.00 2.41
595 1043 2.899256 ACTTTGCAAGCACCCATAACAT 59.101 40.909 0.00 0.00 0.00 2.71
596 1044 3.324556 ACTTTGCAAGCACCCATAACATT 59.675 39.130 0.00 0.00 0.00 2.71
597 1045 4.202346 ACTTTGCAAGCACCCATAACATTT 60.202 37.500 0.00 0.00 0.00 2.32
598 1046 3.316071 TGCAAGCACCCATAACATTTG 57.684 42.857 0.00 0.00 0.00 2.32
599 1047 2.632028 TGCAAGCACCCATAACATTTGT 59.368 40.909 0.00 0.00 0.00 2.83
600 1048 3.070734 TGCAAGCACCCATAACATTTGTT 59.929 39.130 1.08 1.08 41.73 2.83
601 1049 3.432933 GCAAGCACCCATAACATTTGTTG 59.567 43.478 6.21 0.00 38.90 3.33
602 1050 4.798924 GCAAGCACCCATAACATTTGTTGA 60.799 41.667 6.21 0.00 38.90 3.18
603 1051 5.481105 CAAGCACCCATAACATTTGTTGAT 58.519 37.500 6.21 0.00 38.90 2.57
604 1052 5.075858 AGCACCCATAACATTTGTTGATG 57.924 39.130 6.21 6.19 38.90 3.07
605 1053 4.771577 AGCACCCATAACATTTGTTGATGA 59.228 37.500 6.21 0.00 38.90 2.92
606 1054 5.422970 AGCACCCATAACATTTGTTGATGAT 59.577 36.000 6.21 0.00 38.90 2.45
607 1055 5.750067 GCACCCATAACATTTGTTGATGATC 59.250 40.000 6.21 0.00 38.90 2.92
608 1056 6.627731 GCACCCATAACATTTGTTGATGATCA 60.628 38.462 0.00 0.00 38.90 2.92
609 1057 7.494211 CACCCATAACATTTGTTGATGATCAT 58.506 34.615 8.25 8.25 38.90 2.45
610 1058 7.982919 CACCCATAACATTTGTTGATGATCATT 59.017 33.333 10.14 0.00 38.90 2.57
611 1059 8.199449 ACCCATAACATTTGTTGATGATCATTC 58.801 33.333 10.14 4.08 38.90 2.67
612 1060 8.418662 CCCATAACATTTGTTGATGATCATTCT 58.581 33.333 10.14 0.00 38.90 2.40
613 1061 9.459640 CCATAACATTTGTTGATGATCATTCTC 57.540 33.333 10.14 0.00 38.90 2.87
616 1064 7.457024 ACATTTGTTGATGATCATTCTCACA 57.543 32.000 10.14 7.73 0.00 3.58
617 1065 7.888424 ACATTTGTTGATGATCATTCTCACAA 58.112 30.769 10.14 12.81 0.00 3.33
618 1066 8.361889 ACATTTGTTGATGATCATTCTCACAAA 58.638 29.630 23.56 23.56 31.29 2.83
619 1067 8.860128 CATTTGTTGATGATCATTCTCACAAAG 58.140 33.333 24.48 17.94 30.79 2.77
620 1068 7.514784 TTGTTGATGATCATTCTCACAAAGT 57.485 32.000 10.14 0.00 0.00 2.66
621 1069 7.514784 TGTTGATGATCATTCTCACAAAGTT 57.485 32.000 10.14 0.00 0.00 2.66
622 1070 7.944061 TGTTGATGATCATTCTCACAAAGTTT 58.056 30.769 10.14 0.00 0.00 2.66
623 1071 8.077991 TGTTGATGATCATTCTCACAAAGTTTC 58.922 33.333 10.14 0.00 0.00 2.78
624 1072 7.748691 TGATGATCATTCTCACAAAGTTTCA 57.251 32.000 10.14 0.00 0.00 2.69
625 1073 7.813645 TGATGATCATTCTCACAAAGTTTCAG 58.186 34.615 10.14 0.00 0.00 3.02
626 1074 7.662669 TGATGATCATTCTCACAAAGTTTCAGA 59.337 33.333 10.14 0.00 0.00 3.27
627 1075 7.991084 TGATCATTCTCACAAAGTTTCAGAT 57.009 32.000 0.00 0.00 0.00 2.90
628 1076 8.400184 TGATCATTCTCACAAAGTTTCAGATT 57.600 30.769 0.00 0.00 0.00 2.40
629 1077 8.853126 TGATCATTCTCACAAAGTTTCAGATTT 58.147 29.630 0.00 0.00 0.00 2.17
630 1078 9.688592 GATCATTCTCACAAAGTTTCAGATTTT 57.311 29.630 0.00 0.00 0.00 1.82
661 1109 9.643693 AAATGTTTCACTATATTTCTTGCTTGG 57.356 29.630 0.00 0.00 0.00 3.61
662 1110 7.156876 TGTTTCACTATATTTCTTGCTTGGG 57.843 36.000 0.00 0.00 0.00 4.12
663 1111 6.719370 TGTTTCACTATATTTCTTGCTTGGGT 59.281 34.615 0.00 0.00 0.00 4.51
664 1112 6.757897 TTCACTATATTTCTTGCTTGGGTG 57.242 37.500 0.00 0.00 0.00 4.61
665 1113 4.640201 TCACTATATTTCTTGCTTGGGTGC 59.360 41.667 0.00 0.00 0.00 5.01
666 1114 4.398988 CACTATATTTCTTGCTTGGGTGCA 59.601 41.667 0.00 0.00 41.65 4.57
667 1115 3.874392 ATATTTCTTGCTTGGGTGCAC 57.126 42.857 8.80 8.80 43.20 4.57
668 1116 0.681175 ATTTCTTGCTTGGGTGCACC 59.319 50.000 28.57 28.57 43.20 5.01
669 1117 1.733402 TTTCTTGCTTGGGTGCACCG 61.733 55.000 29.08 16.87 43.20 4.94
670 1118 2.902423 TTCTTGCTTGGGTGCACCGT 62.902 55.000 29.08 0.00 43.20 4.83
671 1119 3.198236 CTTGCTTGGGTGCACCGTG 62.198 63.158 29.08 20.92 43.20 4.94
674 1122 3.663176 CTTGGGTGCACCGTGCTG 61.663 66.667 29.08 13.32 45.31 4.41
684 1132 4.077184 CCGTGCTGGGGCGTAGAA 62.077 66.667 0.00 0.00 42.25 2.10
685 1133 2.047655 CGTGCTGGGGCGTAGAAA 60.048 61.111 0.00 0.00 42.25 2.52
686 1134 1.669760 CGTGCTGGGGCGTAGAAAA 60.670 57.895 0.00 0.00 42.25 2.29
687 1135 1.231958 CGTGCTGGGGCGTAGAAAAA 61.232 55.000 0.00 0.00 42.25 1.94
688 1136 1.173913 GTGCTGGGGCGTAGAAAAAT 58.826 50.000 0.00 0.00 42.25 1.82
689 1137 1.132453 GTGCTGGGGCGTAGAAAAATC 59.868 52.381 0.00 0.00 42.25 2.17
690 1138 1.271652 TGCTGGGGCGTAGAAAAATCA 60.272 47.619 0.00 0.00 42.25 2.57
691 1139 1.132453 GCTGGGGCGTAGAAAAATCAC 59.868 52.381 0.00 0.00 0.00 3.06
692 1140 2.711542 CTGGGGCGTAGAAAAATCACT 58.288 47.619 0.00 0.00 0.00 3.41
693 1141 2.678336 CTGGGGCGTAGAAAAATCACTC 59.322 50.000 0.00 0.00 0.00 3.51
694 1142 2.304761 TGGGGCGTAGAAAAATCACTCT 59.695 45.455 0.00 0.00 0.00 3.24
695 1143 2.937149 GGGGCGTAGAAAAATCACTCTC 59.063 50.000 0.00 0.00 0.00 3.20
700 1148 6.239232 GGGCGTAGAAAAATCACTCTCCTATA 60.239 42.308 0.00 0.00 0.00 1.31
702 1150 7.709613 GGCGTAGAAAAATCACTCTCCTATAAA 59.290 37.037 0.00 0.00 0.00 1.40
712 1160 7.914427 TCACTCTCCTATAAAATAGCTTCCA 57.086 36.000 0.00 0.00 0.00 3.53
713 1161 7.957002 TCACTCTCCTATAAAATAGCTTCCAG 58.043 38.462 0.00 0.00 0.00 3.86
714 1162 7.785028 TCACTCTCCTATAAAATAGCTTCCAGA 59.215 37.037 0.00 0.00 0.00 3.86
720 1168 6.205658 CCTATAAAATAGCTTCCAGAGTTGCC 59.794 42.308 0.00 0.00 0.00 4.52
738 1186 7.123247 AGAGTTGCCTAGCATAATTGAACAATT 59.877 33.333 15.41 15.41 38.76 2.32
739 1187 7.260603 AGTTGCCTAGCATAATTGAACAATTC 58.739 34.615 14.68 3.44 38.76 2.17
740 1188 6.772360 TGCCTAGCATAATTGAACAATTCA 57.228 33.333 14.68 0.00 36.64 2.57
741 1189 7.167924 TGCCTAGCATAATTGAACAATTCAA 57.832 32.000 14.68 6.46 43.04 2.69
1146 1610 3.536570 GAGCTCAATAACCTTCCAGGAC 58.463 50.000 9.40 0.00 37.67 3.85
1178 1642 3.320541 AGCAGCAGTACTATCACTCATCC 59.679 47.826 0.00 0.00 0.00 3.51
1214 1678 0.674895 GCTTCCTCGCTTGGTGATGT 60.675 55.000 0.00 0.00 0.00 3.06
1262 1726 4.365514 TGTAAGTTGCCTTCCATCTTCA 57.634 40.909 0.00 0.00 35.61 3.02
1264 1728 5.324409 TGTAAGTTGCCTTCCATCTTCAAT 58.676 37.500 0.00 0.00 35.61 2.57
1265 1729 5.415701 TGTAAGTTGCCTTCCATCTTCAATC 59.584 40.000 0.00 0.00 35.61 2.67
1266 1730 4.313020 AGTTGCCTTCCATCTTCAATCT 57.687 40.909 0.00 0.00 0.00 2.40
1267 1731 4.670765 AGTTGCCTTCCATCTTCAATCTT 58.329 39.130 0.00 0.00 0.00 2.40
1268 1732 5.082425 AGTTGCCTTCCATCTTCAATCTTT 58.918 37.500 0.00 0.00 0.00 2.52
1269 1733 5.184671 AGTTGCCTTCCATCTTCAATCTTTC 59.815 40.000 0.00 0.00 0.00 2.62
1270 1734 4.665451 TGCCTTCCATCTTCAATCTTTCA 58.335 39.130 0.00 0.00 0.00 2.69
1271 1735 5.266788 TGCCTTCCATCTTCAATCTTTCAT 58.733 37.500 0.00 0.00 0.00 2.57
1289 1753 4.833478 TCATTCTTTCTTCTAGCTGCCT 57.167 40.909 0.00 0.00 0.00 4.75
1310 1774 3.015312 GCGGAGGACTAACGCCCTT 62.015 63.158 9.00 0.00 46.92 3.95
1311 1775 1.141234 CGGAGGACTAACGCCCTTC 59.859 63.158 0.00 0.00 31.84 3.46
1312 1776 1.321074 CGGAGGACTAACGCCCTTCT 61.321 60.000 0.00 0.00 31.84 2.85
1313 1777 0.175989 GGAGGACTAACGCCCTTCTG 59.824 60.000 0.00 0.00 31.84 3.02
1321 1785 0.537188 AACGCCCTTCTGTGATCGAT 59.463 50.000 0.00 0.00 0.00 3.59
1323 1787 1.754803 ACGCCCTTCTGTGATCGATTA 59.245 47.619 0.00 0.00 0.00 1.75
1383 1847 0.035317 TGCTTCAAGACGACATGCCT 59.965 50.000 0.00 0.00 0.00 4.75
1404 1868 1.080093 GTCAATGACGACGAGGCCA 60.080 57.895 5.01 0.00 0.00 5.36
1414 1878 1.521423 CGACGAGGCCATTATTTCGAC 59.479 52.381 15.83 9.13 36.89 4.20
1550 2014 0.110056 CTGCAAGGCATGTTCGACAC 60.110 55.000 0.00 0.00 38.13 3.67
1587 2051 1.526455 CGTTTCGGTGTTGGGGGAA 60.526 57.895 0.00 0.00 0.00 3.97
1644 2108 1.533625 TGCAGTTAAATCAAGCGGCT 58.466 45.000 0.00 0.00 0.00 5.52
1755 2219 2.783135 CTTCTCTTGCAAGCCCTACAA 58.217 47.619 21.99 1.40 0.00 2.41
1865 2329 3.606687 CCATACAGCTAGGGTTTCGTTT 58.393 45.455 0.00 0.00 0.00 3.60
1868 2332 5.394883 CCATACAGCTAGGGTTTCGTTTAGA 60.395 44.000 0.00 0.00 0.00 2.10
1940 2404 3.832492 GCGAGGAGAAGCGAGCCT 61.832 66.667 0.00 0.00 33.97 4.58
1946 2410 1.599606 GGAGAAGCGAGCCTGACTCA 61.600 60.000 0.00 0.00 46.63 3.41
1982 2446 3.770040 CCACGGATCGAGGCACCA 61.770 66.667 0.00 0.00 30.30 4.17
2011 2475 2.172419 CACGTTTAAGGTGCGGCG 59.828 61.111 0.51 0.51 0.00 6.46
2012 2476 2.280321 ACGTTTAAGGTGCGGCGT 60.280 55.556 9.37 0.00 0.00 5.68
2025 2489 1.371758 CGGCGTGATCGATCCGATT 60.372 57.895 28.70 0.00 47.00 3.34
2026 2490 0.109919 CGGCGTGATCGATCCGATTA 60.110 55.000 28.70 8.94 47.00 1.75
2027 2491 1.664874 CGGCGTGATCGATCCGATTAA 60.665 52.381 28.70 8.30 47.00 1.40
2028 2492 2.400399 GGCGTGATCGATCCGATTAAA 58.600 47.619 28.70 7.66 47.00 1.52
2029 2493 2.993899 GGCGTGATCGATCCGATTAAAT 59.006 45.455 28.70 0.00 47.00 1.40
2030 2494 3.432252 GGCGTGATCGATCCGATTAAATT 59.568 43.478 28.70 0.00 47.00 1.82
2031 2495 4.084013 GGCGTGATCGATCCGATTAAATTT 60.084 41.667 28.70 0.00 47.00 1.82
2032 2496 5.073478 GCGTGATCGATCCGATTAAATTTC 58.927 41.667 28.70 11.97 47.00 2.17
2038 2502 9.574458 TGATCGATCCGATTAAATTTCTAGATC 57.426 33.333 22.31 0.87 47.00 2.75
2041 2505 9.411801 TCGATCCGATTAAATTTCTAGATCTTG 57.588 33.333 0.00 0.00 0.00 3.02
2042 2506 9.197694 CGATCCGATTAAATTTCTAGATCTTGT 57.802 33.333 0.00 0.00 0.00 3.16
2063 2527 2.756760 TGATCTTTCTGCATTTCAGGGC 59.243 45.455 0.00 0.00 43.06 5.19
2064 2528 2.291209 TCTTTCTGCATTTCAGGGCA 57.709 45.000 0.00 0.00 43.06 5.36
2245 2710 3.127030 GTCTCGCCTTTTGGAAAGGTATG 59.873 47.826 17.94 10.28 44.07 2.39
2329 2794 5.279256 GGAGAGAACAAGTGCTCTTCTACTT 60.279 44.000 11.89 0.00 41.33 2.24
2524 2995 4.695455 CCATTCCGGAACATCGCTTATAAT 59.305 41.667 21.56 0.00 36.56 1.28
2528 2999 5.120399 TCCGGAACATCGCTTATAATTTGT 58.880 37.500 0.00 0.00 0.00 2.83
2530 3001 6.094325 TCCGGAACATCGCTTATAATTTGTTT 59.906 34.615 0.00 0.00 0.00 2.83
2652 3125 9.190858 TCAAATTTTCCATCTTATGTTTTCGTG 57.809 29.630 0.00 0.00 0.00 4.35
2653 3126 9.190858 CAAATTTTCCATCTTATGTTTTCGTGA 57.809 29.630 0.00 0.00 0.00 4.35
2654 3127 9.757227 AAATTTTCCATCTTATGTTTTCGTGAA 57.243 25.926 0.00 0.00 0.00 3.18
2664 3137 2.287547 TGTTTTCGTGAATGCTTGGCTC 60.288 45.455 0.00 0.00 0.00 4.70
2672 3145 1.475280 GAATGCTTGGCTCTTGATGCA 59.525 47.619 0.00 0.00 34.88 3.96
2743 3216 4.083862 AAGGACCTCCGAAGCCGC 62.084 66.667 0.00 0.00 42.08 6.53
2841 3314 1.547372 TGGAGGCACGTTTAGGTAGAC 59.453 52.381 0.00 0.00 0.00 2.59
2891 3364 3.928211 CATGTACACGTGCTAAGCAATC 58.072 45.455 17.22 0.00 41.47 2.67
2924 3397 4.739716 CCAGATTACAAACAAACACAGTGC 59.260 41.667 0.00 0.00 0.00 4.40
2944 3417 2.288395 GCTGAGGCTAAAGCAAAGCAAA 60.288 45.455 14.93 0.00 44.36 3.68
2945 3418 3.572584 CTGAGGCTAAAGCAAAGCAAAG 58.427 45.455 4.07 0.00 44.36 2.77
2946 3419 2.288395 TGAGGCTAAAGCAAAGCAAAGC 60.288 45.455 4.07 0.00 44.36 3.51
2947 3420 1.688197 AGGCTAAAGCAAAGCAAAGCA 59.312 42.857 4.07 0.00 44.36 3.91
2948 3421 2.102925 AGGCTAAAGCAAAGCAAAGCAA 59.897 40.909 4.07 0.00 44.36 3.91
2975 3450 6.984474 GCCACATGTTGCTAGTACTAAGATAA 59.016 38.462 14.37 0.00 0.00 1.75
3039 3514 4.050852 AGCCTGTGAAGAAAAAGCAAAG 57.949 40.909 0.00 0.00 0.00 2.77
3076 3551 5.473039 AGCAATATGAAGCAACCAAAAGAC 58.527 37.500 0.00 0.00 0.00 3.01
3104 3579 1.152881 GGCCACAAGGGGAGCTATG 60.153 63.158 0.00 0.00 37.04 2.23
3163 3638 9.706846 GCTAACGTAAATATAAAAATGTTCGGT 57.293 29.630 0.00 0.00 0.00 4.69
3245 3726 8.253113 CACAACTAAATGGAAAGGAATAATGCT 58.747 33.333 0.00 0.00 0.00 3.79
3250 3731 4.497291 TGGAAAGGAATAATGCTACCGT 57.503 40.909 0.00 0.00 0.00 4.83
3298 3780 3.057019 TGTTGTGTATGACAGTCGAAGC 58.943 45.455 0.00 0.00 35.44 3.86
3299 3781 3.057019 GTTGTGTATGACAGTCGAAGCA 58.943 45.455 0.00 0.00 35.44 3.91
3323 3805 3.883489 GGAATTCGAAAGGAGGGGTTATG 59.117 47.826 0.00 0.00 0.00 1.90
3352 3834 1.777272 GGATGACAAAGGGCCCTCTAT 59.223 52.381 28.84 13.75 0.00 1.98
3367 3849 6.388394 GGGCCCTCTATGGATAGAAAGATATT 59.612 42.308 17.04 0.00 38.80 1.28
3454 3936 7.701539 ATAAATCAATATGCGCCTTGGATTA 57.298 32.000 4.18 9.40 0.00 1.75
3466 3948 5.758784 GCGCCTTGGATTACTATTAAGTCTT 59.241 40.000 0.00 0.00 37.15 3.01
3467 3949 6.292919 GCGCCTTGGATTACTATTAAGTCTTG 60.293 42.308 0.00 0.00 37.15 3.02
3468 3950 6.984474 CGCCTTGGATTACTATTAAGTCTTGA 59.016 38.462 0.00 0.00 37.15 3.02
3469 3951 7.657761 CGCCTTGGATTACTATTAAGTCTTGAT 59.342 37.037 0.00 0.00 37.15 2.57
3470 3952 9.343539 GCCTTGGATTACTATTAAGTCTTGATT 57.656 33.333 0.00 0.00 37.15 2.57
3485 3967 8.707938 AAGTCTTGATTTTATTGCTTATTGGC 57.292 30.769 0.00 0.00 0.00 4.52
3486 3968 8.071177 AGTCTTGATTTTATTGCTTATTGGCT 57.929 30.769 0.00 0.00 0.00 4.75
3487 3969 9.189156 AGTCTTGATTTTATTGCTTATTGGCTA 57.811 29.630 0.00 0.00 0.00 3.93
3488 3970 9.971922 GTCTTGATTTTATTGCTTATTGGCTAT 57.028 29.630 0.00 0.00 0.00 2.97
3491 3973 9.545105 TTGATTTTATTGCTTATTGGCTATTGG 57.455 29.630 0.00 0.00 0.00 3.16
3492 3974 8.922237 TGATTTTATTGCTTATTGGCTATTGGA 58.078 29.630 0.00 0.00 0.00 3.53
3493 3975 9.415544 GATTTTATTGCTTATTGGCTATTGGAG 57.584 33.333 0.00 0.00 0.00 3.86
3494 3976 8.532186 TTTTATTGCTTATTGGCTATTGGAGA 57.468 30.769 0.00 0.00 0.00 3.71
3495 3977 8.532186 TTTATTGCTTATTGGCTATTGGAGAA 57.468 30.769 0.00 0.00 0.00 2.87
3496 3978 8.532186 TTATTGCTTATTGGCTATTGGAGAAA 57.468 30.769 0.00 0.00 0.00 2.52
3497 3979 6.849085 TTGCTTATTGGCTATTGGAGAAAA 57.151 33.333 0.00 0.00 0.00 2.29
3498 3980 6.849085 TGCTTATTGGCTATTGGAGAAAAA 57.151 33.333 0.00 0.00 0.00 1.94
3515 3997 1.256812 AAAACAATTCGCTCCCTGGG 58.743 50.000 6.33 6.33 0.00 4.45
3516 3998 0.611896 AAACAATTCGCTCCCTGGGG 60.612 55.000 14.00 4.79 0.00 4.96
3517 3999 2.830370 CAATTCGCTCCCTGGGGC 60.830 66.667 14.00 14.10 34.68 5.80
3518 4000 4.129148 AATTCGCTCCCTGGGGCC 62.129 66.667 14.00 0.00 34.68 5.80
3532 4014 3.766691 GGCCTGGGCACTTGCATG 61.767 66.667 16.34 0.00 44.36 4.06
3571 4053 3.239627 TTCCCCCTCGAGAGCCACT 62.240 63.158 15.71 0.00 0.00 4.00
3616 4098 3.873812 GGGGATGGCCACCCTACG 61.874 72.222 30.65 0.00 46.03 3.51
3617 4099 3.087906 GGGATGGCCACCCTACGT 61.088 66.667 27.18 4.35 43.65 3.57
3618 4100 1.763256 GGGATGGCCACCCTACGTA 60.763 63.158 27.18 0.00 43.65 3.57
3629 4111 2.192187 CCTACGTACCTCTCCCCGC 61.192 68.421 0.00 0.00 0.00 6.13
3693 4175 2.852130 AGGAGAATAGGGTGAGCCTTT 58.148 47.619 9.14 0.00 34.45 3.11
3696 4178 3.274288 GAGAATAGGGTGAGCCTTTGTG 58.726 50.000 9.14 0.00 34.45 3.33
3708 4190 1.408702 GCCTTTGTGGTGTTCATGTGT 59.591 47.619 0.00 0.00 38.35 3.72
3715 4197 2.032894 GTGGTGTTCATGTGTCTTCGTG 60.033 50.000 0.00 0.00 0.00 4.35
3716 4198 1.069906 GGTGTTCATGTGTCTTCGTGC 60.070 52.381 0.00 0.00 0.00 5.34
3721 4203 3.378911 TCATGTGTCTTCGTGCTAACA 57.621 42.857 0.00 0.00 0.00 2.41
3722 4204 3.057019 TCATGTGTCTTCGTGCTAACAC 58.943 45.455 0.00 0.00 43.76 3.32
3723 4205 1.860676 TGTGTCTTCGTGCTAACACC 58.139 50.000 0.00 0.00 44.40 4.16
3724 4206 1.145803 GTGTCTTCGTGCTAACACCC 58.854 55.000 0.00 0.00 44.40 4.61
3725 4207 0.753867 TGTCTTCGTGCTAACACCCA 59.246 50.000 0.00 0.00 44.40 4.51
3726 4208 1.346395 TGTCTTCGTGCTAACACCCAT 59.654 47.619 0.00 0.00 44.40 4.00
3727 4209 2.000447 GTCTTCGTGCTAACACCCATC 59.000 52.381 0.00 0.00 44.40 3.51
3728 4210 1.066430 TCTTCGTGCTAACACCCATCC 60.066 52.381 0.00 0.00 44.40 3.51
3729 4211 0.981183 TTCGTGCTAACACCCATCCT 59.019 50.000 0.00 0.00 44.40 3.24
3730 4212 0.535335 TCGTGCTAACACCCATCCTC 59.465 55.000 0.00 0.00 44.40 3.71
3731 4213 0.462047 CGTGCTAACACCCATCCTCC 60.462 60.000 0.00 0.00 44.40 4.30
3732 4214 0.618458 GTGCTAACACCCATCCTCCA 59.382 55.000 0.00 0.00 41.21 3.86
3733 4215 1.004277 GTGCTAACACCCATCCTCCAA 59.996 52.381 0.00 0.00 41.21 3.53
3734 4216 1.922447 TGCTAACACCCATCCTCCAAT 59.078 47.619 0.00 0.00 0.00 3.16
3735 4217 3.118038 GTGCTAACACCCATCCTCCAATA 60.118 47.826 0.00 0.00 41.21 1.90
3736 4218 3.136443 TGCTAACACCCATCCTCCAATAG 59.864 47.826 0.00 0.00 0.00 1.73
3737 4219 3.136626 GCTAACACCCATCCTCCAATAGT 59.863 47.826 0.00 0.00 0.00 2.12
3738 4220 3.652057 AACACCCATCCTCCAATAGTG 57.348 47.619 0.00 0.00 0.00 2.74
3739 4221 2.845659 ACACCCATCCTCCAATAGTGA 58.154 47.619 0.00 0.00 0.00 3.41
3740 4222 2.505819 ACACCCATCCTCCAATAGTGAC 59.494 50.000 0.00 0.00 0.00 3.67
3741 4223 2.774234 CACCCATCCTCCAATAGTGACT 59.226 50.000 0.00 0.00 0.00 3.41
3742 4224 3.967326 CACCCATCCTCCAATAGTGACTA 59.033 47.826 0.00 0.00 0.00 2.59
3743 4225 4.039730 CACCCATCCTCCAATAGTGACTAG 59.960 50.000 0.00 0.00 0.00 2.57
3744 4226 3.007398 CCCATCCTCCAATAGTGACTAGC 59.993 52.174 0.00 0.00 0.00 3.42
3745 4227 3.007398 CCATCCTCCAATAGTGACTAGCC 59.993 52.174 0.00 0.00 0.00 3.93
3746 4228 3.689872 TCCTCCAATAGTGACTAGCCT 57.310 47.619 0.00 0.00 0.00 4.58
3747 4229 3.567397 TCCTCCAATAGTGACTAGCCTC 58.433 50.000 0.00 0.00 0.00 4.70
3748 4230 2.630580 CCTCCAATAGTGACTAGCCTCC 59.369 54.545 0.00 0.00 0.00 4.30
3749 4231 2.630580 CTCCAATAGTGACTAGCCTCCC 59.369 54.545 0.00 0.00 0.00 4.30
3750 4232 2.247635 TCCAATAGTGACTAGCCTCCCT 59.752 50.000 0.00 0.00 0.00 4.20
3751 4233 2.630580 CCAATAGTGACTAGCCTCCCTC 59.369 54.545 0.00 0.00 0.00 4.30
3752 4234 2.630580 CAATAGTGACTAGCCTCCCTCC 59.369 54.545 0.00 0.00 0.00 4.30
3753 4235 0.556747 TAGTGACTAGCCTCCCTCCC 59.443 60.000 0.00 0.00 0.00 4.30
3754 4236 1.001760 GTGACTAGCCTCCCTCCCA 59.998 63.158 0.00 0.00 0.00 4.37
3755 4237 1.045911 GTGACTAGCCTCCCTCCCAG 61.046 65.000 0.00 0.00 0.00 4.45
3756 4238 1.458588 GACTAGCCTCCCTCCCAGG 60.459 68.421 0.00 0.00 34.30 4.45
3757 4239 1.941820 ACTAGCCTCCCTCCCAGGA 60.942 63.158 0.00 0.00 37.67 3.86
3758 4240 1.307976 ACTAGCCTCCCTCCCAGGAT 61.308 60.000 0.00 0.00 37.67 3.24
3759 4241 0.835543 CTAGCCTCCCTCCCAGGATG 60.836 65.000 0.00 0.00 37.67 3.51
3760 4242 1.603633 TAGCCTCCCTCCCAGGATGT 61.604 60.000 0.00 0.00 37.67 3.06
3761 4243 2.750657 GCCTCCCTCCCAGGATGTG 61.751 68.421 0.00 0.00 37.67 3.21
3762 4244 1.003442 CCTCCCTCCCAGGATGTGA 59.997 63.158 0.00 0.00 37.67 3.58
3763 4245 0.621571 CCTCCCTCCCAGGATGTGAA 60.622 60.000 0.00 0.00 37.67 3.18
3764 4246 0.543749 CTCCCTCCCAGGATGTGAAC 59.456 60.000 0.00 0.00 37.67 3.18
3765 4247 0.178876 TCCCTCCCAGGATGTGAACA 60.179 55.000 0.00 0.00 37.67 3.18
3766 4248 0.035056 CCCTCCCAGGATGTGAACAC 60.035 60.000 0.00 0.00 37.67 3.32
3767 4249 0.987294 CCTCCCAGGATGTGAACACT 59.013 55.000 6.51 0.00 37.67 3.55
3768 4250 1.339438 CCTCCCAGGATGTGAACACTG 60.339 57.143 6.51 0.00 37.67 3.66
3770 4252 3.254629 CCAGGATGTGAACACTGGG 57.745 57.895 10.76 0.00 45.21 4.45
3771 4253 0.692476 CCAGGATGTGAACACTGGGA 59.308 55.000 10.76 0.00 45.21 4.37
3772 4254 1.283029 CCAGGATGTGAACACTGGGAT 59.717 52.381 10.76 0.00 45.21 3.85
3773 4255 2.362736 CAGGATGTGAACACTGGGATG 58.637 52.381 6.51 0.00 0.00 3.51
3774 4256 1.098050 GGATGTGAACACTGGGATGC 58.902 55.000 6.51 0.00 0.00 3.91
3775 4257 1.614051 GGATGTGAACACTGGGATGCA 60.614 52.381 6.51 0.00 0.00 3.96
3776 4258 2.372264 GATGTGAACACTGGGATGCAT 58.628 47.619 0.00 0.00 0.00 3.96
3777 4259 1.825090 TGTGAACACTGGGATGCATC 58.175 50.000 18.81 18.81 0.00 3.91
3778 4260 1.073603 TGTGAACACTGGGATGCATCA 59.926 47.619 27.25 8.45 0.00 3.07
3779 4261 2.291089 TGTGAACACTGGGATGCATCAT 60.291 45.455 27.25 7.54 0.00 2.45
3780 4262 2.357009 GTGAACACTGGGATGCATCATC 59.643 50.000 27.25 18.46 39.87 2.92
3781 4263 2.240414 TGAACACTGGGATGCATCATCT 59.760 45.455 27.25 4.42 40.39 2.90
3782 4264 3.285484 GAACACTGGGATGCATCATCTT 58.715 45.455 27.25 9.52 40.39 2.40
3783 4265 2.928334 ACACTGGGATGCATCATCTTC 58.072 47.619 27.25 9.97 40.39 2.87
3784 4266 2.508716 ACACTGGGATGCATCATCTTCT 59.491 45.455 27.25 3.35 40.39 2.85
3785 4267 3.053842 ACACTGGGATGCATCATCTTCTT 60.054 43.478 27.25 3.72 40.39 2.52
3786 4268 4.164796 ACACTGGGATGCATCATCTTCTTA 59.835 41.667 27.25 4.09 40.39 2.10
3787 4269 4.755629 CACTGGGATGCATCATCTTCTTAG 59.244 45.833 27.25 14.23 40.39 2.18
3788 4270 4.657504 ACTGGGATGCATCATCTTCTTAGA 59.342 41.667 27.25 1.88 40.39 2.10
3789 4271 5.131642 ACTGGGATGCATCATCTTCTTAGAA 59.868 40.000 27.25 0.00 40.39 2.10
3790 4272 5.618236 TGGGATGCATCATCTTCTTAGAAG 58.382 41.667 27.25 15.30 40.39 2.85
3791 4273 5.131642 TGGGATGCATCATCTTCTTAGAAGT 59.868 40.000 27.25 6.57 40.39 3.01
3792 4274 6.060788 GGGATGCATCATCTTCTTAGAAGTT 58.939 40.000 27.25 10.41 40.39 2.66
3793 4275 6.545298 GGGATGCATCATCTTCTTAGAAGTTT 59.455 38.462 27.25 7.88 40.39 2.66
3794 4276 7.255070 GGGATGCATCATCTTCTTAGAAGTTTC 60.255 40.741 27.25 6.72 40.39 2.78
3795 4277 6.653273 TGCATCATCTTCTTAGAAGTTTCG 57.347 37.500 19.87 8.57 33.20 3.46
3796 4278 5.582269 TGCATCATCTTCTTAGAAGTTTCGG 59.418 40.000 19.87 10.43 33.20 4.30
3797 4279 5.582665 GCATCATCTTCTTAGAAGTTTCGGT 59.417 40.000 19.87 2.98 33.20 4.69
3798 4280 6.092807 GCATCATCTTCTTAGAAGTTTCGGTT 59.907 38.462 19.87 0.19 33.20 4.44
3799 4281 7.277981 GCATCATCTTCTTAGAAGTTTCGGTTA 59.722 37.037 19.87 0.52 33.20 2.85
3800 4282 9.319143 CATCATCTTCTTAGAAGTTTCGGTTAT 57.681 33.333 19.87 2.81 33.20 1.89
3801 4283 8.928270 TCATCTTCTTAGAAGTTTCGGTTATC 57.072 34.615 19.87 0.00 33.20 1.75
3802 4284 7.980099 TCATCTTCTTAGAAGTTTCGGTTATCC 59.020 37.037 19.87 0.00 33.20 2.59
3803 4285 6.637657 TCTTCTTAGAAGTTTCGGTTATCCC 58.362 40.000 19.87 0.00 0.00 3.85
3804 4286 6.439692 TCTTCTTAGAAGTTTCGGTTATCCCT 59.560 38.462 19.87 0.00 0.00 4.20
3805 4287 7.616935 TCTTCTTAGAAGTTTCGGTTATCCCTA 59.383 37.037 19.87 0.00 0.00 3.53
3806 4288 7.722949 TCTTAGAAGTTTCGGTTATCCCTAA 57.277 36.000 0.00 0.00 0.00 2.69
3807 4289 7.550712 TCTTAGAAGTTTCGGTTATCCCTAAC 58.449 38.462 0.00 0.00 37.16 2.34
3815 4297 2.816204 GTTATCCCTAACCCTCGCTC 57.184 55.000 0.00 0.00 32.63 5.03
3816 4298 2.317973 GTTATCCCTAACCCTCGCTCT 58.682 52.381 0.00 0.00 32.63 4.09
3817 4299 2.289592 TATCCCTAACCCTCGCTCTC 57.710 55.000 0.00 0.00 0.00 3.20
3818 4300 0.558712 ATCCCTAACCCTCGCTCTCT 59.441 55.000 0.00 0.00 0.00 3.10
3819 4301 1.219773 TCCCTAACCCTCGCTCTCTA 58.780 55.000 0.00 0.00 0.00 2.43
3820 4302 1.143277 TCCCTAACCCTCGCTCTCTAG 59.857 57.143 0.00 0.00 0.00 2.43
3821 4303 1.133730 CCCTAACCCTCGCTCTCTAGT 60.134 57.143 0.00 0.00 0.00 2.57
3822 4304 2.657143 CCTAACCCTCGCTCTCTAGTT 58.343 52.381 0.00 0.00 0.00 2.24
3823 4305 3.025262 CCTAACCCTCGCTCTCTAGTTT 58.975 50.000 0.00 0.00 0.00 2.66
3824 4306 3.447944 CCTAACCCTCGCTCTCTAGTTTT 59.552 47.826 0.00 0.00 0.00 2.43
3825 4307 3.320673 AACCCTCGCTCTCTAGTTTTG 57.679 47.619 0.00 0.00 0.00 2.44
3826 4308 1.550976 ACCCTCGCTCTCTAGTTTTGG 59.449 52.381 0.00 0.00 0.00 3.28
3827 4309 1.550976 CCCTCGCTCTCTAGTTTTGGT 59.449 52.381 0.00 0.00 0.00 3.67
3828 4310 2.028020 CCCTCGCTCTCTAGTTTTGGTT 60.028 50.000 0.00 0.00 0.00 3.67
3829 4311 3.557264 CCCTCGCTCTCTAGTTTTGGTTT 60.557 47.826 0.00 0.00 0.00 3.27
3830 4312 4.322499 CCCTCGCTCTCTAGTTTTGGTTTA 60.322 45.833 0.00 0.00 0.00 2.01
3831 4313 4.626172 CCTCGCTCTCTAGTTTTGGTTTAC 59.374 45.833 0.00 0.00 0.00 2.01
3832 4314 5.464030 TCGCTCTCTAGTTTTGGTTTACT 57.536 39.130 0.00 0.00 0.00 2.24
3833 4315 5.850614 TCGCTCTCTAGTTTTGGTTTACTT 58.149 37.500 0.00 0.00 0.00 2.24
3834 4316 6.285990 TCGCTCTCTAGTTTTGGTTTACTTT 58.714 36.000 0.00 0.00 0.00 2.66
3835 4317 6.202188 TCGCTCTCTAGTTTTGGTTTACTTTG 59.798 38.462 0.00 0.00 0.00 2.77
3836 4318 6.565999 CGCTCTCTAGTTTTGGTTTACTTTGG 60.566 42.308 0.00 0.00 0.00 3.28
3837 4319 6.262496 GCTCTCTAGTTTTGGTTTACTTTGGT 59.738 38.462 0.00 0.00 0.00 3.67
3838 4320 7.520131 GCTCTCTAGTTTTGGTTTACTTTGGTC 60.520 40.741 0.00 0.00 0.00 4.02
3839 4321 7.340256 TCTCTAGTTTTGGTTTACTTTGGTCA 58.660 34.615 0.00 0.00 0.00 4.02
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 3.267597 CTCCGGCCCAAAAGTTGCG 62.268 63.158 0.00 0.00 0.00 4.85
46 47 1.076332 CTTAGCCGAACTCCCAAACG 58.924 55.000 0.00 0.00 0.00 3.60
58 59 1.779569 CGCCTAACCATACTTAGCCG 58.220 55.000 0.00 0.00 0.00 5.52
107 109 3.305064 CCTTAGAGCAACTCTAGCCGATC 60.305 52.174 4.64 0.00 42.92 3.69
113 115 6.239176 CCAAGTATCCCTTAGAGCAACTCTAG 60.239 46.154 4.64 0.00 42.92 2.43
137 139 3.131396 CACCTATGATAGTTTGCCGACC 58.869 50.000 0.00 0.00 0.00 4.79
225 231 1.834263 GACTTGCCTCCACATACCTCT 59.166 52.381 0.00 0.00 0.00 3.69
227 233 0.912486 GGACTTGCCTCCACATACCT 59.088 55.000 0.00 0.00 0.00 3.08
257 267 4.766891 ACATAGCACCCAAATATATGTGGC 59.233 41.667 15.74 5.59 36.11 5.01
264 274 7.560991 TCTTCATTTCACATAGCACCCAAATAT 59.439 33.333 0.00 0.00 0.00 1.28
285 295 8.502105 TGTCAGTAGATCTACGTAATTCTTCA 57.498 34.615 23.82 12.52 40.80 3.02
286 296 9.601971 GATGTCAGTAGATCTACGTAATTCTTC 57.398 37.037 23.82 15.48 40.80 2.87
292 302 5.363101 ACCGATGTCAGTAGATCTACGTAA 58.637 41.667 23.82 13.31 40.80 3.18
293 303 4.953667 ACCGATGTCAGTAGATCTACGTA 58.046 43.478 23.82 14.81 40.80 3.57
299 309 4.268884 GCTTGAAACCGATGTCAGTAGATC 59.731 45.833 0.00 0.00 0.00 2.75
307 317 2.083774 TGATGGCTTGAAACCGATGTC 58.916 47.619 0.00 0.00 0.00 3.06
331 341 9.650539 GCTATATTTTCTTGCAGAGAGATATGA 57.349 33.333 16.35 0.00 35.37 2.15
374 384 9.844257 TTTATCATTCCCACAAAGTTTCAATTT 57.156 25.926 0.00 0.00 0.00 1.82
375 385 9.271828 GTTTATCATTCCCACAAAGTTTCAATT 57.728 29.630 0.00 0.00 0.00 2.32
376 386 8.428063 TGTTTATCATTCCCACAAAGTTTCAAT 58.572 29.630 0.00 0.00 0.00 2.57
378 388 7.353414 TGTTTATCATTCCCACAAAGTTTCA 57.647 32.000 0.00 0.00 0.00 2.69
380 390 6.183360 TGCTGTTTATCATTCCCACAAAGTTT 60.183 34.615 0.00 0.00 0.00 2.66
382 392 4.832266 TGCTGTTTATCATTCCCACAAAGT 59.168 37.500 0.00 0.00 0.00 2.66
383 393 5.389859 TGCTGTTTATCATTCCCACAAAG 57.610 39.130 0.00 0.00 0.00 2.77
385 395 5.798125 TTTGCTGTTTATCATTCCCACAA 57.202 34.783 0.00 0.00 0.00 3.33
386 396 5.245751 ACATTTGCTGTTTATCATTCCCACA 59.754 36.000 0.00 0.00 32.90 4.17
387 397 5.723295 ACATTTGCTGTTTATCATTCCCAC 58.277 37.500 0.00 0.00 32.90 4.61
388 398 5.999205 ACATTTGCTGTTTATCATTCCCA 57.001 34.783 0.00 0.00 32.90 4.37
393 403 9.520204 GCACTTATAACATTTGCTGTTTATCAT 57.480 29.630 0.00 0.00 45.98 2.45
394 404 8.739039 AGCACTTATAACATTTGCTGTTTATCA 58.261 29.630 5.68 0.00 45.98 2.15
395 405 9.573133 AAGCACTTATAACATTTGCTGTTTATC 57.427 29.630 6.81 0.00 45.98 1.75
396 406 9.357652 CAAGCACTTATAACATTTGCTGTTTAT 57.642 29.630 6.81 0.00 45.98 1.40
397 407 8.356657 ACAAGCACTTATAACATTTGCTGTTTA 58.643 29.630 6.81 0.00 45.98 2.01
398 408 7.209475 ACAAGCACTTATAACATTTGCTGTTT 58.791 30.769 6.81 0.00 45.98 2.83
401 411 8.741101 TTTACAAGCACTTATAACATTTGCTG 57.259 30.769 6.81 5.13 42.69 4.41
403 413 8.742554 ACTTTACAAGCACTTATAACATTTGC 57.257 30.769 0.00 0.00 0.00 3.68
406 416 9.691362 CCAAACTTTACAAGCACTTATAACATT 57.309 29.630 0.00 0.00 0.00 2.71
407 417 8.856103 ACCAAACTTTACAAGCACTTATAACAT 58.144 29.630 0.00 0.00 0.00 2.71
409 419 7.114388 GCACCAAACTTTACAAGCACTTATAAC 59.886 37.037 0.00 0.00 0.00 1.89
411 421 6.488683 AGCACCAAACTTTACAAGCACTTATA 59.511 34.615 0.00 0.00 0.00 0.98
412 422 5.301805 AGCACCAAACTTTACAAGCACTTAT 59.698 36.000 0.00 0.00 0.00 1.73
416 426 3.181491 TGAGCACCAAACTTTACAAGCAC 60.181 43.478 0.00 0.00 0.00 4.40
417 427 3.020274 TGAGCACCAAACTTTACAAGCA 58.980 40.909 0.00 0.00 0.00 3.91
418 428 3.708563 TGAGCACCAAACTTTACAAGC 57.291 42.857 0.00 0.00 0.00 4.01
419 429 7.704472 TGTTATTTGAGCACCAAACTTTACAAG 59.296 33.333 6.46 0.00 46.41 3.16
420 430 7.548097 TGTTATTTGAGCACCAAACTTTACAA 58.452 30.769 6.46 0.00 46.41 2.41
421 431 7.101652 TGTTATTTGAGCACCAAACTTTACA 57.898 32.000 6.46 6.28 46.41 2.41
422 432 9.124807 GTATGTTATTTGAGCACCAAACTTTAC 57.875 33.333 6.46 4.36 46.41 2.01
423 433 8.018520 CGTATGTTATTTGAGCACCAAACTTTA 58.981 33.333 6.46 0.00 46.41 1.85
424 434 6.861055 CGTATGTTATTTGAGCACCAAACTTT 59.139 34.615 6.46 0.00 46.41 2.66
425 435 6.205853 TCGTATGTTATTTGAGCACCAAACTT 59.794 34.615 6.46 0.00 46.41 2.66
427 437 5.933790 TCGTATGTTATTTGAGCACCAAAC 58.066 37.500 6.46 0.00 46.41 2.93
429 439 4.634004 CCTCGTATGTTATTTGAGCACCAA 59.366 41.667 0.00 0.00 0.00 3.67
430 440 4.081365 TCCTCGTATGTTATTTGAGCACCA 60.081 41.667 0.00 0.00 0.00 4.17
431 441 4.439057 TCCTCGTATGTTATTTGAGCACC 58.561 43.478 0.00 0.00 0.00 5.01
432 442 4.025647 GCTCCTCGTATGTTATTTGAGCAC 60.026 45.833 0.00 0.00 42.58 4.40
433 443 4.119862 GCTCCTCGTATGTTATTTGAGCA 58.880 43.478 0.00 0.00 42.58 4.26
434 444 4.372656 AGCTCCTCGTATGTTATTTGAGC 58.627 43.478 0.00 0.00 43.19 4.26
435 445 4.985409 GGAGCTCCTCGTATGTTATTTGAG 59.015 45.833 26.25 0.00 0.00 3.02
436 446 4.499188 CGGAGCTCCTCGTATGTTATTTGA 60.499 45.833 29.73 0.00 0.00 2.69
438 448 3.383825 ACGGAGCTCCTCGTATGTTATTT 59.616 43.478 29.73 0.00 37.88 1.40
439 449 2.957006 ACGGAGCTCCTCGTATGTTATT 59.043 45.455 29.73 0.00 37.88 1.40
440 450 2.584236 ACGGAGCTCCTCGTATGTTAT 58.416 47.619 29.73 0.00 37.88 1.89
442 452 1.674962 GTACGGAGCTCCTCGTATGTT 59.325 52.381 29.73 4.62 42.57 2.71
443 453 1.307097 GTACGGAGCTCCTCGTATGT 58.693 55.000 29.73 20.46 42.57 2.29
444 454 0.235144 CGTACGGAGCTCCTCGTATG 59.765 60.000 29.73 25.19 42.57 2.39
445 455 0.105593 TCGTACGGAGCTCCTCGTAT 59.894 55.000 29.73 12.53 42.57 3.06
446 456 0.108186 TTCGTACGGAGCTCCTCGTA 60.108 55.000 29.73 23.13 40.31 3.43
447 457 0.957395 TTTCGTACGGAGCTCCTCGT 60.957 55.000 29.73 24.14 42.55 4.18
448 458 0.169672 TTTTCGTACGGAGCTCCTCG 59.830 55.000 29.73 27.06 0.00 4.63
449 459 2.094854 TCTTTTTCGTACGGAGCTCCTC 60.095 50.000 29.73 18.07 0.00 3.71
450 460 1.891150 TCTTTTTCGTACGGAGCTCCT 59.109 47.619 29.73 18.74 0.00 3.69
453 463 2.806608 TGTCTTTTTCGTACGGAGCT 57.193 45.000 16.52 0.00 0.00 4.09
455 465 7.346695 TGTAATTTTGTCTTTTTCGTACGGAG 58.653 34.615 16.52 8.74 0.00 4.63
456 466 7.244166 TGTAATTTTGTCTTTTTCGTACGGA 57.756 32.000 16.52 2.84 0.00 4.69
457 467 7.895582 TTGTAATTTTGTCTTTTTCGTACGG 57.104 32.000 16.52 0.00 0.00 4.02
462 472 9.356929 GCAGATTTTGTAATTTTGTCTTTTTCG 57.643 29.630 0.00 0.00 0.00 3.46
468 898 9.034544 GTTTGAGCAGATTTTGTAATTTTGTCT 57.965 29.630 0.00 0.00 0.00 3.41
471 901 8.819974 ACTGTTTGAGCAGATTTTGTAATTTTG 58.180 29.630 1.73 0.00 39.62 2.44
478 908 3.130869 TGCACTGTTTGAGCAGATTTTGT 59.869 39.130 1.73 0.00 37.35 2.83
482 912 4.595762 AAATGCACTGTTTGAGCAGATT 57.404 36.364 1.73 0.00 44.80 2.40
484 914 7.395190 AATATAAATGCACTGTTTGAGCAGA 57.605 32.000 1.73 0.00 44.80 4.26
485 915 8.377681 CAAAATATAAATGCACTGTTTGAGCAG 58.622 33.333 0.00 0.00 44.80 4.24
486 916 8.087136 TCAAAATATAAATGCACTGTTTGAGCA 58.913 29.630 0.00 0.00 45.58 4.26
488 918 9.630098 AGTCAAAATATAAATGCACTGTTTGAG 57.370 29.630 0.00 0.00 35.18 3.02
536 984 1.250328 TCGAGGAGCTCCGTACAAAA 58.750 50.000 26.95 6.99 42.08 2.44
538 986 1.134367 CATTCGAGGAGCTCCGTACAA 59.866 52.381 26.95 17.72 42.08 2.41
539 987 0.738975 CATTCGAGGAGCTCCGTACA 59.261 55.000 26.95 13.24 42.08 2.90
540 988 0.739561 ACATTCGAGGAGCTCCGTAC 59.260 55.000 26.95 19.80 42.08 3.67
543 991 2.802787 ATAACATTCGAGGAGCTCCG 57.197 50.000 26.95 16.18 42.08 4.63
544 992 4.271291 GTCAAATAACATTCGAGGAGCTCC 59.729 45.833 26.22 26.22 0.00 4.70
545 993 4.271291 GGTCAAATAACATTCGAGGAGCTC 59.729 45.833 4.71 4.71 0.00 4.09
546 994 4.192317 GGTCAAATAACATTCGAGGAGCT 58.808 43.478 0.00 0.00 0.00 4.09
547 995 3.938963 TGGTCAAATAACATTCGAGGAGC 59.061 43.478 0.00 0.00 0.00 4.70
548 996 4.332819 GGTGGTCAAATAACATTCGAGGAG 59.667 45.833 0.00 0.00 0.00 3.69
549 997 4.258543 GGTGGTCAAATAACATTCGAGGA 58.741 43.478 0.00 0.00 0.00 3.71
550 998 4.006989 TGGTGGTCAAATAACATTCGAGG 58.993 43.478 0.00 0.00 0.00 4.63
551 999 5.621197 TTGGTGGTCAAATAACATTCGAG 57.379 39.130 0.00 0.00 31.46 4.04
552 1000 5.533154 AGTTTGGTGGTCAAATAACATTCGA 59.467 36.000 0.00 0.00 45.79 3.71
553 1001 5.768317 AGTTTGGTGGTCAAATAACATTCG 58.232 37.500 0.00 0.00 45.79 3.34
555 1003 6.259829 GCAAAGTTTGGTGGTCAAATAACATT 59.740 34.615 17.11 0.00 45.79 2.71
556 1004 5.757808 GCAAAGTTTGGTGGTCAAATAACAT 59.242 36.000 17.11 0.00 45.79 2.71
557 1005 5.112686 GCAAAGTTTGGTGGTCAAATAACA 58.887 37.500 17.11 0.00 45.79 2.41
559 1007 5.344743 TGCAAAGTTTGGTGGTCAAATAA 57.655 34.783 17.11 0.00 45.79 1.40
561 1009 3.902881 TGCAAAGTTTGGTGGTCAAAT 57.097 38.095 17.11 0.00 45.79 2.32
562 1010 3.594134 CTTGCAAAGTTTGGTGGTCAAA 58.406 40.909 17.11 0.00 39.70 2.69
564 1012 2.957491 CTTGCAAAGTTTGGTGGTCA 57.043 45.000 17.11 3.47 39.70 4.02
574 1022 9.947478 AACAAATGTTATGGGTGCTTGCAAAGT 62.947 37.037 0.00 0.00 40.65 2.66
575 1023 7.675897 AACAAATGTTATGGGTGCTTGCAAAG 61.676 38.462 0.00 0.00 41.17 2.77
576 1024 4.063689 CAAATGTTATGGGTGCTTGCAAA 58.936 39.130 0.00 0.00 0.00 3.68
577 1025 3.070734 ACAAATGTTATGGGTGCTTGCAA 59.929 39.130 0.00 0.00 0.00 4.08
578 1026 2.632028 ACAAATGTTATGGGTGCTTGCA 59.368 40.909 0.00 0.00 0.00 4.08
579 1027 3.317603 ACAAATGTTATGGGTGCTTGC 57.682 42.857 0.00 0.00 0.00 4.01
580 1028 4.880759 TCAACAAATGTTATGGGTGCTTG 58.119 39.130 0.00 0.00 36.32 4.01
581 1029 5.245751 TCATCAACAAATGTTATGGGTGCTT 59.754 36.000 0.00 0.00 36.32 3.91
582 1030 4.771577 TCATCAACAAATGTTATGGGTGCT 59.228 37.500 0.00 0.00 36.32 4.40
583 1031 5.070770 TCATCAACAAATGTTATGGGTGC 57.929 39.130 0.00 0.00 36.32 5.01
584 1032 6.865411 TGATCATCAACAAATGTTATGGGTG 58.135 36.000 0.00 0.00 36.32 4.61
585 1033 7.664552 ATGATCATCAACAAATGTTATGGGT 57.335 32.000 1.18 0.00 36.32 4.51
586 1034 8.418662 AGAATGATCATCAACAAATGTTATGGG 58.581 33.333 9.06 0.00 36.32 4.00
587 1035 9.459640 GAGAATGATCATCAACAAATGTTATGG 57.540 33.333 9.06 0.00 36.32 2.74
590 1038 9.012161 TGTGAGAATGATCATCAACAAATGTTA 57.988 29.630 9.06 0.00 36.32 2.41
591 1039 7.888424 TGTGAGAATGATCATCAACAAATGTT 58.112 30.769 9.06 0.00 39.12 2.71
592 1040 7.457024 TGTGAGAATGATCATCAACAAATGT 57.543 32.000 9.06 0.00 0.00 2.71
593 1041 8.751302 TTTGTGAGAATGATCATCAACAAATG 57.249 30.769 21.79 0.00 33.98 2.32
594 1042 8.582437 ACTTTGTGAGAATGATCATCAACAAAT 58.418 29.630 23.80 16.71 36.21 2.32
595 1043 7.944061 ACTTTGTGAGAATGATCATCAACAAA 58.056 30.769 22.96 22.96 35.82 2.83
596 1044 7.514784 ACTTTGTGAGAATGATCATCAACAA 57.485 32.000 9.06 13.45 0.00 2.83
597 1045 7.514784 AACTTTGTGAGAATGATCATCAACA 57.485 32.000 9.06 8.40 0.00 3.33
598 1046 8.077991 TGAAACTTTGTGAGAATGATCATCAAC 58.922 33.333 9.06 5.95 0.00 3.18
599 1047 8.168790 TGAAACTTTGTGAGAATGATCATCAA 57.831 30.769 9.06 5.69 0.00 2.57
600 1048 7.662669 TCTGAAACTTTGTGAGAATGATCATCA 59.337 33.333 9.06 0.42 0.00 3.07
601 1049 8.037382 TCTGAAACTTTGTGAGAATGATCATC 57.963 34.615 9.06 2.96 0.00 2.92
602 1050 7.991084 TCTGAAACTTTGTGAGAATGATCAT 57.009 32.000 1.18 1.18 0.00 2.45
603 1051 7.991084 ATCTGAAACTTTGTGAGAATGATCA 57.009 32.000 0.00 0.00 0.00 2.92
604 1052 9.688592 AAAATCTGAAACTTTGTGAGAATGATC 57.311 29.630 0.00 0.00 0.00 2.92
635 1083 9.643693 CCAAGCAAGAAATATAGTGAAACATTT 57.356 29.630 0.00 0.00 41.43 2.32
636 1084 8.253113 CCCAAGCAAGAAATATAGTGAAACATT 58.747 33.333 0.00 0.00 41.43 2.71
637 1085 7.397192 ACCCAAGCAAGAAATATAGTGAAACAT 59.603 33.333 0.00 0.00 41.43 2.71
638 1086 6.719370 ACCCAAGCAAGAAATATAGTGAAACA 59.281 34.615 0.00 0.00 41.43 2.83
639 1087 7.029563 CACCCAAGCAAGAAATATAGTGAAAC 58.970 38.462 0.00 0.00 0.00 2.78
640 1088 6.350110 GCACCCAAGCAAGAAATATAGTGAAA 60.350 38.462 0.00 0.00 0.00 2.69
641 1089 5.125417 GCACCCAAGCAAGAAATATAGTGAA 59.875 40.000 0.00 0.00 0.00 3.18
642 1090 4.640201 GCACCCAAGCAAGAAATATAGTGA 59.360 41.667 0.00 0.00 0.00 3.41
643 1091 4.398988 TGCACCCAAGCAAGAAATATAGTG 59.601 41.667 0.00 0.00 42.46 2.74
644 1092 4.599041 TGCACCCAAGCAAGAAATATAGT 58.401 39.130 0.00 0.00 42.46 2.12
667 1115 3.599285 TTTCTACGCCCCAGCACGG 62.599 63.158 0.00 0.00 39.83 4.94
668 1116 1.231958 TTTTTCTACGCCCCAGCACG 61.232 55.000 0.00 0.00 39.83 5.34
669 1117 1.132453 GATTTTTCTACGCCCCAGCAC 59.868 52.381 0.00 0.00 39.83 4.40
670 1118 1.271652 TGATTTTTCTACGCCCCAGCA 60.272 47.619 0.00 0.00 39.83 4.41
671 1119 1.132453 GTGATTTTTCTACGCCCCAGC 59.868 52.381 0.00 0.00 0.00 4.85
672 1120 2.678336 GAGTGATTTTTCTACGCCCCAG 59.322 50.000 0.00 0.00 0.00 4.45
673 1121 2.304761 AGAGTGATTTTTCTACGCCCCA 59.695 45.455 0.00 0.00 0.00 4.96
674 1122 2.937149 GAGAGTGATTTTTCTACGCCCC 59.063 50.000 0.00 0.00 0.00 5.80
675 1123 2.937149 GGAGAGTGATTTTTCTACGCCC 59.063 50.000 0.00 0.00 0.00 6.13
676 1124 3.863041 AGGAGAGTGATTTTTCTACGCC 58.137 45.455 0.00 0.00 29.28 5.68
677 1125 8.644318 TTTATAGGAGAGTGATTTTTCTACGC 57.356 34.615 0.00 0.00 29.28 4.42
685 1133 9.785982 GGAAGCTATTTTATAGGAGAGTGATTT 57.214 33.333 0.00 0.00 0.00 2.17
686 1134 8.938883 TGGAAGCTATTTTATAGGAGAGTGATT 58.061 33.333 0.00 0.00 0.00 2.57
687 1135 8.497910 TGGAAGCTATTTTATAGGAGAGTGAT 57.502 34.615 0.00 0.00 0.00 3.06
688 1136 7.785028 TCTGGAAGCTATTTTATAGGAGAGTGA 59.215 37.037 0.00 0.00 0.00 3.41
689 1137 7.957002 TCTGGAAGCTATTTTATAGGAGAGTG 58.043 38.462 0.00 0.00 0.00 3.51
690 1138 7.787424 ACTCTGGAAGCTATTTTATAGGAGAGT 59.213 37.037 0.00 0.00 32.42 3.24
691 1139 8.189119 ACTCTGGAAGCTATTTTATAGGAGAG 57.811 38.462 0.00 0.00 0.00 3.20
692 1140 8.424918 CAACTCTGGAAGCTATTTTATAGGAGA 58.575 37.037 0.00 0.00 0.00 3.71
693 1141 7.172361 GCAACTCTGGAAGCTATTTTATAGGAG 59.828 40.741 0.00 0.00 0.00 3.69
694 1142 6.992715 GCAACTCTGGAAGCTATTTTATAGGA 59.007 38.462 0.00 0.00 0.00 2.94
695 1143 6.205658 GGCAACTCTGGAAGCTATTTTATAGG 59.794 42.308 0.00 0.00 0.00 2.57
714 1162 7.093814 TGAATTGTTCAATTATGCTAGGCAACT 60.094 33.333 10.20 0.00 44.02 3.16
738 1186 8.298854 CCATGTGTGTTGAGAAGAATTTATTGA 58.701 33.333 0.00 0.00 0.00 2.57
739 1187 8.298854 TCCATGTGTGTTGAGAAGAATTTATTG 58.701 33.333 0.00 0.00 0.00 1.90
740 1188 8.408043 TCCATGTGTGTTGAGAAGAATTTATT 57.592 30.769 0.00 0.00 0.00 1.40
741 1189 8.299570 GTTCCATGTGTGTTGAGAAGAATTTAT 58.700 33.333 0.00 0.00 0.00 1.40
793 1243 6.224584 GCTTAATAGTCATCAGGGTCTAACC 58.775 44.000 0.00 0.00 37.60 2.85
1146 1610 4.421515 CTGCTGCTCCTGTGGGGG 62.422 72.222 0.00 0.00 35.80 5.40
1214 1678 0.037697 GTGCGTCCAGTCCATGTGTA 60.038 55.000 0.00 0.00 0.00 2.90
1262 1726 7.148103 GGCAGCTAGAAGAAAGAATGAAAGATT 60.148 37.037 0.00 0.00 0.00 2.40
1264 1728 5.645497 GGCAGCTAGAAGAAAGAATGAAAGA 59.355 40.000 0.00 0.00 0.00 2.52
1265 1729 5.647225 AGGCAGCTAGAAGAAAGAATGAAAG 59.353 40.000 0.00 0.00 0.00 2.62
1266 1730 5.413833 CAGGCAGCTAGAAGAAAGAATGAAA 59.586 40.000 0.00 0.00 0.00 2.69
1267 1731 4.940046 CAGGCAGCTAGAAGAAAGAATGAA 59.060 41.667 0.00 0.00 0.00 2.57
1268 1732 4.019860 ACAGGCAGCTAGAAGAAAGAATGA 60.020 41.667 0.00 0.00 0.00 2.57
1269 1733 4.094590 CACAGGCAGCTAGAAGAAAGAATG 59.905 45.833 0.00 0.00 0.00 2.67
1270 1734 4.260170 CACAGGCAGCTAGAAGAAAGAAT 58.740 43.478 0.00 0.00 0.00 2.40
1271 1735 3.668447 CACAGGCAGCTAGAAGAAAGAA 58.332 45.455 0.00 0.00 0.00 2.52
1289 1753 2.260434 GCGTTAGTCCTCCGCACA 59.740 61.111 0.00 0.00 46.26 4.57
1297 1761 0.606604 TCACAGAAGGGCGTTAGTCC 59.393 55.000 0.00 0.00 44.17 3.85
1304 1768 2.509052 TAATCGATCACAGAAGGGCG 57.491 50.000 0.00 0.00 0.00 6.13
1306 1770 9.155975 CCTAATTAATAATCGATCACAGAAGGG 57.844 37.037 0.00 0.00 0.00 3.95
1310 1774 7.755373 CGCTCCTAATTAATAATCGATCACAGA 59.245 37.037 0.00 0.00 0.00 3.41
1311 1775 7.009631 CCGCTCCTAATTAATAATCGATCACAG 59.990 40.741 0.00 0.00 0.00 3.66
1312 1776 6.811665 CCGCTCCTAATTAATAATCGATCACA 59.188 38.462 0.00 0.00 0.00 3.58
1313 1777 6.255887 CCCGCTCCTAATTAATAATCGATCAC 59.744 42.308 0.00 0.00 0.00 3.06
1321 1785 5.548406 GCTTCTCCCGCTCCTAATTAATAA 58.452 41.667 0.00 0.00 0.00 1.40
1323 1787 3.555168 CGCTTCTCCCGCTCCTAATTAAT 60.555 47.826 0.00 0.00 0.00 1.40
1404 1868 3.393800 CGGCTGATGAGGTCGAAATAAT 58.606 45.455 0.00 0.00 0.00 1.28
1414 1878 4.899239 GACGGCCGGCTGATGAGG 62.899 72.222 41.14 16.17 0.00 3.86
1587 2051 1.077212 GCTGGTGGATGACTGGCAT 60.077 57.895 0.00 0.00 40.77 4.40
1622 2086 2.796032 GCCGCTTGATTTAACTGCATCC 60.796 50.000 0.00 0.00 0.00 3.51
1644 2108 2.125326 ACCGCCTAGCATCTGCGTA 61.125 57.895 9.05 0.00 46.44 4.42
1725 2189 1.681945 GCAAGAGAAGCTGCGACGAG 61.682 60.000 0.00 0.00 0.00 4.18
1755 2219 1.679898 GCTGTAGCTGGTCTTGGGT 59.320 57.895 0.00 0.00 38.21 4.51
1786 2250 1.507140 ATTACCTTCGCCATGAGGGA 58.493 50.000 0.00 0.00 46.64 4.20
1828 2292 5.093849 TGTATGGCCTCTGGTAGTAAAAC 57.906 43.478 3.32 0.00 0.00 2.43
1829 2293 4.383770 GCTGTATGGCCTCTGGTAGTAAAA 60.384 45.833 3.32 0.00 0.00 1.52
1865 2329 7.510685 AGGAGAAACTGAGGTTATGCATATCTA 59.489 37.037 7.36 0.00 34.90 1.98
1868 2332 6.294473 CAGGAGAAACTGAGGTTATGCATAT 58.706 40.000 7.36 0.00 40.97 1.78
2011 2475 8.744008 TCTAGAAATTTAATCGGATCGATCAC 57.256 34.615 25.93 14.45 46.30 3.06
2012 2476 9.574458 GATCTAGAAATTTAATCGGATCGATCA 57.426 33.333 25.93 7.83 46.30 2.92
2064 2528 4.545823 TCGATCGAAGCAACAAAAAGTT 57.454 36.364 16.99 0.00 42.42 2.66
2245 2710 5.931146 TGATTCAGAGCAGAAAGAAGAACTC 59.069 40.000 0.00 0.00 0.00 3.01
2329 2794 5.048921 GTCATTATCGATCTCAGACGGGTTA 60.049 44.000 0.00 0.00 0.00 2.85
2461 2930 2.417787 GCAAGGGAAGGCATGTGATTTC 60.418 50.000 0.00 0.00 0.00 2.17
2524 2995 5.182190 TGCAGTGAGTTCAGTGTTAAACAAA 59.818 36.000 16.08 0.00 46.30 2.83
2528 2999 4.513442 ACTGCAGTGAGTTCAGTGTTAAA 58.487 39.130 20.97 2.65 46.30 1.52
2530 3001 3.384789 AGACTGCAGTGAGTTCAGTGTTA 59.615 43.478 27.27 7.15 46.30 2.41
2630 3103 9.357652 CATTCACGAAAACATAAGATGGAAAAT 57.642 29.630 0.00 0.00 33.60 1.82
2633 3106 6.150976 AGCATTCACGAAAACATAAGATGGAA 59.849 34.615 0.00 0.00 33.60 3.53
2652 3125 1.475280 TGCATCAAGAGCCAAGCATTC 59.525 47.619 0.00 0.00 0.00 2.67
2653 3126 1.552578 TGCATCAAGAGCCAAGCATT 58.447 45.000 0.00 0.00 0.00 3.56
2654 3127 1.552578 TTGCATCAAGAGCCAAGCAT 58.447 45.000 0.00 0.00 0.00 3.79
2672 3145 2.560981 CGGAACCCTACCAAGCAAAATT 59.439 45.455 0.00 0.00 0.00 1.82
2891 3364 7.433708 TTGTTTGTAATCTGGACATGTACAG 57.566 36.000 29.32 29.32 42.93 2.74
2924 3397 3.572584 CTTTGCTTTGCTTTAGCCTCAG 58.427 45.455 0.00 0.00 41.18 3.35
2945 3418 1.270550 ACTAGCAACATGTGGCTTTGC 59.729 47.619 32.00 20.94 44.93 3.68
2946 3419 3.753272 AGTACTAGCAACATGTGGCTTTG 59.247 43.478 32.00 24.91 41.41 2.77
2947 3420 4.021102 AGTACTAGCAACATGTGGCTTT 57.979 40.909 32.00 21.04 41.41 3.51
2948 3421 3.703001 AGTACTAGCAACATGTGGCTT 57.297 42.857 32.00 18.05 41.41 4.35
2975 3450 9.554395 TTTGATGATCACCGTTTACATACATAT 57.446 29.630 0.00 0.00 0.00 1.78
3019 3494 4.045636 TCTTTGCTTTTTCTTCACAGGC 57.954 40.909 0.00 0.00 0.00 4.85
3050 3525 7.761249 GTCTTTTGGTTGCTTCATATTGCTTAT 59.239 33.333 0.00 0.00 0.00 1.73
3051 3526 7.090173 GTCTTTTGGTTGCTTCATATTGCTTA 58.910 34.615 0.00 0.00 0.00 3.09
3057 3532 7.894376 CAAATGTCTTTTGGTTGCTTCATAT 57.106 32.000 3.76 0.00 40.90 1.78
3091 3566 9.775854 CTCATAATTATATCATAGCTCCCCTTG 57.224 37.037 0.00 0.00 0.00 3.61
3160 3635 2.228582 TCAAATCATTTGGCACTGACCG 59.771 45.455 10.30 0.00 40.98 4.79
3163 3638 4.216902 CAGTCTCAAATCATTTGGCACTGA 59.783 41.667 24.58 9.86 44.60 3.41
3165 3640 4.217118 GTCAGTCTCAAATCATTTGGCACT 59.783 41.667 10.30 9.19 40.98 4.40
3266 3747 9.448438 ACTGTCATACACAACACACAAATATAT 57.552 29.630 0.00 0.00 33.31 0.86
3298 3780 2.301346 CCCCTCCTTTCGAATTCCATG 58.699 52.381 0.00 0.00 0.00 3.66
3299 3781 1.923148 ACCCCTCCTTTCGAATTCCAT 59.077 47.619 0.00 0.00 0.00 3.41
3323 3805 4.398358 GGCCCTTTGTCATCCTTAAGTAAC 59.602 45.833 0.97 0.00 0.00 2.50
3422 3904 7.491682 AGGCGCATATTGATTTATTTGTTCTT 58.508 30.769 10.83 0.00 0.00 2.52
3439 3921 6.765403 ACTTAATAGTAATCCAAGGCGCATA 58.235 36.000 10.83 0.00 31.21 3.14
3466 3948 8.922237 TCCAATAGCCAATAAGCAATAAAATCA 58.078 29.630 0.00 0.00 34.23 2.57
3467 3949 9.415544 CTCCAATAGCCAATAAGCAATAAAATC 57.584 33.333 0.00 0.00 34.23 2.17
3468 3950 9.146586 TCTCCAATAGCCAATAAGCAATAAAAT 57.853 29.630 0.00 0.00 34.23 1.82
3469 3951 8.532186 TCTCCAATAGCCAATAAGCAATAAAA 57.468 30.769 0.00 0.00 34.23 1.52
3470 3952 8.532186 TTCTCCAATAGCCAATAAGCAATAAA 57.468 30.769 0.00 0.00 34.23 1.40
3471 3953 8.532186 TTTCTCCAATAGCCAATAAGCAATAA 57.468 30.769 0.00 0.00 34.23 1.40
3472 3954 8.532186 TTTTCTCCAATAGCCAATAAGCAATA 57.468 30.769 0.00 0.00 34.23 1.90
3473 3955 7.422465 TTTTCTCCAATAGCCAATAAGCAAT 57.578 32.000 0.00 0.00 34.23 3.56
3474 3956 6.849085 TTTTCTCCAATAGCCAATAAGCAA 57.151 33.333 0.00 0.00 34.23 3.91
3475 3957 6.849085 TTTTTCTCCAATAGCCAATAAGCA 57.151 33.333 0.00 0.00 34.23 3.91
3495 3977 1.618343 CCCAGGGAGCGAATTGTTTTT 59.382 47.619 0.00 0.00 0.00 1.94
3496 3978 1.256812 CCCAGGGAGCGAATTGTTTT 58.743 50.000 0.00 0.00 0.00 2.43
3497 3979 0.611896 CCCCAGGGAGCGAATTGTTT 60.612 55.000 7.25 0.00 37.50 2.83
3498 3980 1.000896 CCCCAGGGAGCGAATTGTT 60.001 57.895 7.25 0.00 37.50 2.83
3499 3981 2.677228 CCCCAGGGAGCGAATTGT 59.323 61.111 7.25 0.00 37.50 2.71
3500 3982 2.830370 GCCCCAGGGAGCGAATTG 60.830 66.667 7.25 0.00 37.50 2.32
3501 3983 4.129148 GGCCCCAGGGAGCGAATT 62.129 66.667 7.25 0.00 37.50 2.17
3515 3997 3.766691 CATGCAAGTGCCCAGGCC 61.767 66.667 6.14 0.00 41.18 5.19
3516 3998 2.993264 ACATGCAAGTGCCCAGGC 60.993 61.111 0.38 0.38 41.18 4.85
3517 3999 1.604308 TCACATGCAAGTGCCCAGG 60.604 57.895 17.03 0.00 41.18 4.45
3518 4000 1.582968 GTCACATGCAAGTGCCCAG 59.417 57.895 17.03 0.00 41.18 4.45
3519 4001 1.902918 GGTCACATGCAAGTGCCCA 60.903 57.895 16.65 0.00 37.48 5.36
3520 4002 2.639327 GGGTCACATGCAAGTGCCC 61.639 63.158 27.10 27.10 43.47 5.36
3521 4003 1.252904 ATGGGTCACATGCAAGTGCC 61.253 55.000 17.03 18.96 38.70 5.01
3522 4004 2.269978 ATGGGTCACATGCAAGTGC 58.730 52.632 17.03 11.72 38.70 4.40
3530 4012 3.309121 CCCTAGTTTTCCATGGGTCACAT 60.309 47.826 13.02 0.00 41.57 3.21
3531 4013 2.041081 CCCTAGTTTTCCATGGGTCACA 59.959 50.000 13.02 0.00 33.49 3.58
3532 4014 2.723273 CCCTAGTTTTCCATGGGTCAC 58.277 52.381 13.02 5.96 33.49 3.67
3571 4053 3.039011 GGCAAGGTAAGAGGAGGTATCA 58.961 50.000 0.00 0.00 0.00 2.15
3616 4098 3.155167 CTGGGCGGGGAGAGGTAC 61.155 72.222 0.00 0.00 0.00 3.34
3617 4099 3.352748 TCTGGGCGGGGAGAGGTA 61.353 66.667 0.00 0.00 0.00 3.08
3629 4111 2.808919 TCTCAACCACTAGAGTCTGGG 58.191 52.381 8.53 7.07 33.63 4.45
3693 4175 2.209273 CGAAGACACATGAACACCACA 58.791 47.619 0.00 0.00 0.00 4.17
3696 4178 1.069906 GCACGAAGACACATGAACACC 60.070 52.381 0.00 0.00 0.00 4.16
3708 4190 1.066430 GGATGGGTGTTAGCACGAAGA 60.066 52.381 3.46 0.00 46.13 2.87
3715 4197 2.736670 ATTGGAGGATGGGTGTTAGC 57.263 50.000 0.00 0.00 0.00 3.09
3716 4198 4.408921 TCACTATTGGAGGATGGGTGTTAG 59.591 45.833 0.00 0.00 0.00 2.34
3721 4203 3.136641 AGTCACTATTGGAGGATGGGT 57.863 47.619 0.00 0.00 0.00 4.51
3722 4204 3.007398 GCTAGTCACTATTGGAGGATGGG 59.993 52.174 0.00 0.00 0.00 4.00
3723 4205 3.007398 GGCTAGTCACTATTGGAGGATGG 59.993 52.174 0.00 0.00 0.00 3.51
3724 4206 3.900601 AGGCTAGTCACTATTGGAGGATG 59.099 47.826 0.00 0.00 0.00 3.51
3725 4207 4.156477 GAGGCTAGTCACTATTGGAGGAT 58.844 47.826 0.00 0.00 0.00 3.24
3726 4208 3.567397 GAGGCTAGTCACTATTGGAGGA 58.433 50.000 0.00 0.00 0.00 3.71
3727 4209 2.630580 GGAGGCTAGTCACTATTGGAGG 59.369 54.545 0.00 0.00 0.00 4.30
3728 4210 2.630580 GGGAGGCTAGTCACTATTGGAG 59.369 54.545 0.00 0.00 0.00 3.86
3729 4211 2.247635 AGGGAGGCTAGTCACTATTGGA 59.752 50.000 0.00 0.00 0.00 3.53
3730 4212 2.630580 GAGGGAGGCTAGTCACTATTGG 59.369 54.545 0.00 0.00 26.92 3.16
3731 4213 2.630580 GGAGGGAGGCTAGTCACTATTG 59.369 54.545 0.00 0.00 26.92 1.90
3732 4214 2.426561 GGGAGGGAGGCTAGTCACTATT 60.427 54.545 0.00 0.00 26.92 1.73
3733 4215 1.148236 GGGAGGGAGGCTAGTCACTAT 59.852 57.143 0.00 0.00 26.92 2.12
3734 4216 0.556747 GGGAGGGAGGCTAGTCACTA 59.443 60.000 0.00 0.00 26.92 2.74
3735 4217 1.311747 GGGAGGGAGGCTAGTCACT 59.688 63.158 0.00 0.00 30.67 3.41
3736 4218 1.001760 TGGGAGGGAGGCTAGTCAC 59.998 63.158 0.00 0.00 0.00 3.67
3737 4219 1.311403 CTGGGAGGGAGGCTAGTCA 59.689 63.158 0.00 0.00 0.00 3.41
3738 4220 1.458588 CCTGGGAGGGAGGCTAGTC 60.459 68.421 0.00 0.00 0.00 2.59
3739 4221 1.307976 ATCCTGGGAGGGAGGCTAGT 61.308 60.000 0.00 0.00 38.92 2.57
3740 4222 0.835543 CATCCTGGGAGGGAGGCTAG 60.836 65.000 0.00 0.00 38.92 3.42
3741 4223 1.237163 CATCCTGGGAGGGAGGCTA 59.763 63.158 0.00 0.00 38.92 3.93
3742 4224 2.040043 CATCCTGGGAGGGAGGCT 60.040 66.667 0.00 0.00 38.92 4.58
3743 4225 2.367512 ACATCCTGGGAGGGAGGC 60.368 66.667 6.25 0.00 40.40 4.70
3744 4226 0.621571 TTCACATCCTGGGAGGGAGG 60.622 60.000 6.25 0.00 42.19 4.30
3745 4227 0.543749 GTTCACATCCTGGGAGGGAG 59.456 60.000 6.25 0.00 38.92 4.30
3746 4228 0.178876 TGTTCACATCCTGGGAGGGA 60.179 55.000 6.25 0.00 39.95 4.20
3747 4229 0.035056 GTGTTCACATCCTGGGAGGG 60.035 60.000 6.25 0.00 35.59 4.30
3748 4230 0.987294 AGTGTTCACATCCTGGGAGG 59.013 55.000 5.74 0.00 36.46 4.30
3749 4231 1.339438 CCAGTGTTCACATCCTGGGAG 60.339 57.143 8.21 0.00 36.82 4.30
3750 4232 0.692476 CCAGTGTTCACATCCTGGGA 59.308 55.000 8.21 0.00 36.82 4.37
3751 4233 0.322816 CCCAGTGTTCACATCCTGGG 60.323 60.000 17.14 17.14 46.89 4.45
3752 4234 0.692476 TCCCAGTGTTCACATCCTGG 59.308 55.000 8.89 8.89 38.89 4.45
3753 4235 2.362736 CATCCCAGTGTTCACATCCTG 58.637 52.381 5.74 0.00 0.00 3.86
3754 4236 1.340405 GCATCCCAGTGTTCACATCCT 60.340 52.381 5.74 0.00 0.00 3.24
3755 4237 1.098050 GCATCCCAGTGTTCACATCC 58.902 55.000 5.74 0.00 0.00 3.51
3756 4238 1.825090 TGCATCCCAGTGTTCACATC 58.175 50.000 5.74 0.00 0.00 3.06
3757 4239 2.291089 TGATGCATCCCAGTGTTCACAT 60.291 45.455 23.67 0.00 0.00 3.21
3758 4240 1.073603 TGATGCATCCCAGTGTTCACA 59.926 47.619 23.67 0.00 0.00 3.58
3759 4241 1.825090 TGATGCATCCCAGTGTTCAC 58.175 50.000 23.67 0.00 0.00 3.18
3760 4242 2.240414 AGATGATGCATCCCAGTGTTCA 59.760 45.455 23.67 3.65 41.36 3.18
3761 4243 2.928334 AGATGATGCATCCCAGTGTTC 58.072 47.619 23.67 9.02 41.36 3.18
3762 4244 3.053842 AGAAGATGATGCATCCCAGTGTT 60.054 43.478 23.67 11.48 41.36 3.32
3763 4245 2.508716 AGAAGATGATGCATCCCAGTGT 59.491 45.455 23.67 4.44 41.36 3.55
3764 4246 3.210232 AGAAGATGATGCATCCCAGTG 57.790 47.619 23.67 0.00 41.36 3.66
3765 4247 3.947612 AAGAAGATGATGCATCCCAGT 57.052 42.857 23.67 6.98 41.36 4.00
3766 4248 5.224821 TCTAAGAAGATGATGCATCCCAG 57.775 43.478 23.67 8.68 41.36 4.45
3767 4249 5.131642 ACTTCTAAGAAGATGATGCATCCCA 59.868 40.000 23.67 7.42 41.36 4.37
3768 4250 5.619220 ACTTCTAAGAAGATGATGCATCCC 58.381 41.667 23.67 15.07 41.36 3.85
3769 4251 7.518052 CGAAACTTCTAAGAAGATGATGCATCC 60.518 40.741 23.67 9.46 41.36 3.51
3770 4252 7.343691 CGAAACTTCTAAGAAGATGATGCATC 58.656 38.462 20.14 20.14 40.80 3.91
3771 4253 6.259608 CCGAAACTTCTAAGAAGATGATGCAT 59.740 38.462 0.00 0.00 32.54 3.96
3772 4254 5.582269 CCGAAACTTCTAAGAAGATGATGCA 59.418 40.000 4.95 0.00 32.54 3.96
3773 4255 5.582665 ACCGAAACTTCTAAGAAGATGATGC 59.417 40.000 4.95 0.00 32.54 3.91
3774 4256 7.602517 AACCGAAACTTCTAAGAAGATGATG 57.397 36.000 4.95 0.00 32.54 3.07
3775 4257 9.535878 GATAACCGAAACTTCTAAGAAGATGAT 57.464 33.333 4.95 0.00 32.54 2.45
3776 4258 7.980099 GGATAACCGAAACTTCTAAGAAGATGA 59.020 37.037 4.95 0.00 32.54 2.92
3777 4259 7.224949 GGGATAACCGAAACTTCTAAGAAGATG 59.775 40.741 4.95 4.38 36.97 2.90
3778 4260 7.125963 AGGGATAACCGAAACTTCTAAGAAGAT 59.874 37.037 4.95 0.00 46.96 2.40
3779 4261 6.439692 AGGGATAACCGAAACTTCTAAGAAGA 59.560 38.462 4.95 0.00 46.96 2.87
3780 4262 6.641474 AGGGATAACCGAAACTTCTAAGAAG 58.359 40.000 0.12 0.12 46.96 2.85
3781 4263 6.616237 AGGGATAACCGAAACTTCTAAGAA 57.384 37.500 0.00 0.00 46.96 2.52
3782 4264 7.364144 GGTTAGGGATAACCGAAACTTCTAAGA 60.364 40.741 1.65 0.00 46.96 2.10
3783 4265 6.760298 GGTTAGGGATAACCGAAACTTCTAAG 59.240 42.308 1.65 0.00 46.96 2.18
3784 4266 6.643388 GGTTAGGGATAACCGAAACTTCTAA 58.357 40.000 1.65 0.00 46.96 2.10
3785 4267 6.225981 GGTTAGGGATAACCGAAACTTCTA 57.774 41.667 1.65 0.00 46.96 2.10
3786 4268 5.095145 GGTTAGGGATAACCGAAACTTCT 57.905 43.478 1.65 0.00 46.96 2.85
3795 4277 1.343789 GAGCGAGGGTTAGGGATAACC 59.656 57.143 8.39 8.39 46.63 2.85
3796 4278 2.296752 GAGAGCGAGGGTTAGGGATAAC 59.703 54.545 0.00 0.00 0.00 1.89
3797 4279 2.177233 AGAGAGCGAGGGTTAGGGATAA 59.823 50.000 0.00 0.00 0.00 1.75
3798 4280 1.781529 AGAGAGCGAGGGTTAGGGATA 59.218 52.381 0.00 0.00 0.00 2.59
3799 4281 0.558712 AGAGAGCGAGGGTTAGGGAT 59.441 55.000 0.00 0.00 0.00 3.85
3800 4282 1.143277 CTAGAGAGCGAGGGTTAGGGA 59.857 57.143 0.00 0.00 0.00 4.20
3801 4283 1.133730 ACTAGAGAGCGAGGGTTAGGG 60.134 57.143 0.00 0.00 0.00 3.53
3802 4284 2.351706 ACTAGAGAGCGAGGGTTAGG 57.648 55.000 0.00 0.00 0.00 2.69
3803 4285 4.425520 CAAAACTAGAGAGCGAGGGTTAG 58.574 47.826 0.00 0.00 0.00 2.34
3804 4286 3.194968 CCAAAACTAGAGAGCGAGGGTTA 59.805 47.826 0.00 0.00 0.00 2.85
3805 4287 2.028020 CCAAAACTAGAGAGCGAGGGTT 60.028 50.000 0.00 0.00 0.00 4.11
3806 4288 1.550976 CCAAAACTAGAGAGCGAGGGT 59.449 52.381 0.00 0.00 0.00 4.34
3807 4289 1.550976 ACCAAAACTAGAGAGCGAGGG 59.449 52.381 0.00 0.00 0.00 4.30
3808 4290 3.320673 AACCAAAACTAGAGAGCGAGG 57.679 47.619 0.00 0.00 0.00 4.63
3809 4291 5.471257 AGTAAACCAAAACTAGAGAGCGAG 58.529 41.667 0.00 0.00 0.00 5.03
3810 4292 5.464030 AGTAAACCAAAACTAGAGAGCGA 57.536 39.130 0.00 0.00 0.00 4.93
3811 4293 6.363473 CAAAGTAAACCAAAACTAGAGAGCG 58.637 40.000 0.00 0.00 0.00 5.03
3812 4294 6.262496 ACCAAAGTAAACCAAAACTAGAGAGC 59.738 38.462 0.00 0.00 0.00 4.09
3813 4295 7.497909 TGACCAAAGTAAACCAAAACTAGAGAG 59.502 37.037 0.00 0.00 0.00 3.20
3814 4296 7.340256 TGACCAAAGTAAACCAAAACTAGAGA 58.660 34.615 0.00 0.00 0.00 3.10
3815 4297 7.562454 TGACCAAAGTAAACCAAAACTAGAG 57.438 36.000 0.00 0.00 0.00 2.43


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.