Multiple sequence alignment - TraesCS3B01G347300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G347300 chr3B 100.000 2219 0 0 1 2219 556686702 556684484 0.000000e+00 4098.0
1 TraesCS3B01G347300 chr3A 92.799 861 39 5 579 1426 559813205 559814055 0.000000e+00 1225.0
2 TraesCS3B01G347300 chr3A 93.396 106 4 1 1447 1552 560132037 560132139 1.060000e-33 154.0
3 TraesCS3B01G347300 chr3D 95.187 748 24 4 680 1426 427056771 427056035 0.000000e+00 1171.0
4 TraesCS3B01G347300 chr3D 86.452 155 12 4 1489 1634 427054832 427054678 6.340000e-36 161.0
5 TraesCS3B01G347300 chr3D 89.076 119 9 1 1447 1565 427021446 427021332 6.390000e-31 145.0
6 TraesCS3B01G347300 chr3D 78.212 179 37 2 1959 2136 19934263 19934086 1.800000e-21 113.0
7 TraesCS3B01G347300 chr7A 96.577 555 18 1 1 554 629090587 629090033 0.000000e+00 918.0
8 TraesCS3B01G347300 chr7A 91.516 554 46 1 3 555 10869395 10868842 0.000000e+00 761.0
9 TraesCS3B01G347300 chrUn 94.326 564 22 2 1 554 47924551 47925114 0.000000e+00 856.0
10 TraesCS3B01G347300 chrUn 97.059 34 1 0 1959 1992 318020478 318020511 8.560000e-05 58.4
11 TraesCS3B01G347300 chr4A 93.345 556 36 1 1 555 656740549 656741104 0.000000e+00 821.0
12 TraesCS3B01G347300 chr1B 96.502 486 16 1 1 485 441438686 441438201 0.000000e+00 802.0
13 TraesCS3B01G347300 chr1B 96.477 369 11 2 188 554 321887421 321887053 1.880000e-170 608.0
14 TraesCS3B01G347300 chr1B 83.871 558 86 4 1 555 632666667 632667223 1.510000e-146 529.0
15 TraesCS3B01G347300 chr1B 83.393 560 86 7 1 555 9542759 9543316 1.520000e-141 512.0
16 TraesCS3B01G347300 chr1B 98.851 261 3 0 1957 2217 33822344 33822084 1.200000e-127 466.0
17 TraesCS3B01G347300 chr1B 92.032 251 20 0 1957 2207 288808369 288808119 9.750000e-94 353.0
18 TraesCS3B01G347300 chr5D 91.187 556 48 1 1 555 332502533 332503088 0.000000e+00 754.0
19 TraesCS3B01G347300 chr6B 97.794 272 3 2 1949 2217 301576214 301575943 1.200000e-127 466.0
20 TraesCS3B01G347300 chr6B 97.368 38 1 0 1964 2001 408409582 408409545 5.110000e-07 65.8
21 TraesCS3B01G347300 chr2B 98.467 261 4 0 1957 2217 66195733 66195473 5.580000e-126 460.0
22 TraesCS3B01G347300 chr6D 83.673 98 10 5 1959 2053 18703676 18703770 1.090000e-13 87.9
23 TraesCS3B01G347300 chr4D 75.000 160 37 3 1966 2124 475025024 475025181 1.100000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G347300 chr3B 556684484 556686702 2218 True 4098 4098 100.0000 1 2219 1 chr3B.!!$R1 2218
1 TraesCS3B01G347300 chr3A 559813205 559814055 850 False 1225 1225 92.7990 579 1426 1 chr3A.!!$F1 847
2 TraesCS3B01G347300 chr3D 427054678 427056771 2093 True 666 1171 90.8195 680 1634 2 chr3D.!!$R3 954
3 TraesCS3B01G347300 chr7A 629090033 629090587 554 True 918 918 96.5770 1 554 1 chr7A.!!$R2 553
4 TraesCS3B01G347300 chr7A 10868842 10869395 553 True 761 761 91.5160 3 555 1 chr7A.!!$R1 552
5 TraesCS3B01G347300 chrUn 47924551 47925114 563 False 856 856 94.3260 1 554 1 chrUn.!!$F1 553
6 TraesCS3B01G347300 chr4A 656740549 656741104 555 False 821 821 93.3450 1 555 1 chr4A.!!$F1 554
7 TraesCS3B01G347300 chr1B 632666667 632667223 556 False 529 529 83.8710 1 555 1 chr1B.!!$F2 554
8 TraesCS3B01G347300 chr1B 9542759 9543316 557 False 512 512 83.3930 1 555 1 chr1B.!!$F1 554
9 TraesCS3B01G347300 chr5D 332502533 332503088 555 False 754 754 91.1870 1 555 1 chr5D.!!$F1 554

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
629 654 1.18497 AATTGCCAAACCTCCCACCG 61.185 55.0 0.0 0.0 0.0 4.94 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2119 3337 0.032952 TGTCCGTGCCAGACAAGTAC 59.967 55.0 0.0 0.0 41.17 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.350895 CCTGGACATGGTTGGCGA 59.649 61.111 0.00 0.00 0.00 5.54
91 93 6.701400 GGCTTTGTGAAAATTAACACTGATGT 59.299 34.615 13.44 0.00 42.46 3.06
160 162 1.345741 CTCTGACTCTGCCTTGTTGGA 59.654 52.381 0.00 0.00 38.35 3.53
176 178 3.219281 GTTGGAAGCTTGGAGTAAACCA 58.781 45.455 2.10 0.00 38.24 3.67
253 264 4.708421 TGTTATCTTTGCTACTCTACGGGT 59.292 41.667 0.00 0.00 0.00 5.28
369 381 6.476378 TGTTAGAAATTGGAGAGCTAGCTTT 58.524 36.000 20.42 14.13 0.00 3.51
472 484 3.431912 CGTTGATGGTCATCGAAAGTTGA 59.568 43.478 2.71 0.00 40.81 3.18
508 520 1.361543 ACCTTCCTACTCACCAGCCTA 59.638 52.381 0.00 0.00 0.00 3.93
512 524 3.398318 TCCTACTCACCAGCCTATTGA 57.602 47.619 0.00 0.00 0.00 2.57
555 568 8.006298 TCTTTTGTTGAATAAAGGCTCTCAAA 57.994 30.769 0.00 0.00 33.29 2.69
556 569 8.474025 TCTTTTGTTGAATAAAGGCTCTCAAAA 58.526 29.630 0.00 0.00 33.29 2.44
557 570 9.097257 CTTTTGTTGAATAAAGGCTCTCAAAAA 57.903 29.630 0.00 0.00 33.86 1.94
613 626 2.534019 CGCGGTCGCCATAGCAATT 61.534 57.895 9.85 0.00 39.83 2.32
629 654 1.184970 AATTGCCAAACCTCCCACCG 61.185 55.000 0.00 0.00 0.00 4.94
667 692 3.397439 GGAGGCCAGCAGAGCAGA 61.397 66.667 5.01 0.00 0.00 4.26
698 723 3.745761 TTGCCACCCACCATGTGCA 62.746 57.895 0.00 0.00 32.30 4.57
925 950 1.289066 CTTCTCCGTCGAAGCACCA 59.711 57.895 0.00 0.00 34.59 4.17
1065 1090 4.034258 GTGGTCGTCGCCTCGTCA 62.034 66.667 7.14 0.00 0.00 4.35
1297 1325 3.304911 TCTGGGATTTGTTGTTGTGGA 57.695 42.857 0.00 0.00 0.00 4.02
1305 1333 6.222389 GGATTTGTTGTTGTGGATTCATGAA 58.778 36.000 11.26 11.26 0.00 2.57
1334 1362 3.489416 GGTGCAATTTCGTTTCTTGGTTC 59.511 43.478 0.00 0.00 0.00 3.62
1335 1363 3.179599 GTGCAATTTCGTTTCTTGGTTCG 59.820 43.478 0.00 0.00 0.00 3.95
1336 1364 3.065510 TGCAATTTCGTTTCTTGGTTCGA 59.934 39.130 0.00 0.00 0.00 3.71
1337 1365 3.664025 GCAATTTCGTTTCTTGGTTCGAG 59.336 43.478 0.00 0.00 33.98 4.04
1338 1366 3.537793 ATTTCGTTTCTTGGTTCGAGC 57.462 42.857 0.00 0.00 33.98 5.03
1339 1367 1.223187 TTCGTTTCTTGGTTCGAGCC 58.777 50.000 11.99 11.99 33.98 4.70
1340 1368 0.391597 TCGTTTCTTGGTTCGAGCCT 59.608 50.000 19.73 0.00 0.00 4.58
1341 1369 1.202604 TCGTTTCTTGGTTCGAGCCTT 60.203 47.619 19.73 0.00 0.00 4.35
1382 1410 4.030195 CGTGTGTGTACAGTGACGATATTG 59.970 45.833 12.80 0.00 37.52 1.90
1418 1446 3.181564 CGTTTCATGTTCATTCGTTTGCG 60.182 43.478 0.00 0.00 39.92 4.85
1419 1447 3.887339 TTCATGTTCATTCGTTTGCGA 57.113 38.095 0.00 0.00 46.36 5.10
1433 1461 3.632700 GCGACTTGCACGTGGTAA 58.367 55.556 18.88 3.14 45.45 2.85
1434 1462 1.935925 GCGACTTGCACGTGGTAAA 59.064 52.632 18.88 0.00 45.45 2.01
1435 1463 0.305313 GCGACTTGCACGTGGTAAAA 59.695 50.000 18.88 0.00 45.45 1.52
1436 1464 1.268133 GCGACTTGCACGTGGTAAAAA 60.268 47.619 18.88 0.00 45.45 1.94
1437 1465 2.603652 GCGACTTGCACGTGGTAAAAAT 60.604 45.455 18.88 0.00 45.45 1.82
1438 1466 3.223157 CGACTTGCACGTGGTAAAAATC 58.777 45.455 18.88 0.00 0.00 2.17
1439 1467 3.059188 CGACTTGCACGTGGTAAAAATCT 60.059 43.478 18.88 0.00 0.00 2.40
1440 1468 4.219033 GACTTGCACGTGGTAAAAATCTG 58.781 43.478 18.88 0.00 0.00 2.90
1441 1469 3.004315 ACTTGCACGTGGTAAAAATCTGG 59.996 43.478 18.88 0.00 0.00 3.86
1442 1470 1.268352 TGCACGTGGTAAAAATCTGGC 59.732 47.619 18.88 0.00 0.00 4.85
1443 1471 1.727857 GCACGTGGTAAAAATCTGGCG 60.728 52.381 18.88 0.00 0.00 5.69
1444 1472 1.135803 CACGTGGTAAAAATCTGGCGG 60.136 52.381 7.95 0.00 0.00 6.13
1445 1473 0.450184 CGTGGTAAAAATCTGGCGGG 59.550 55.000 0.00 0.00 0.00 6.13
1446 1474 1.541379 GTGGTAAAAATCTGGCGGGT 58.459 50.000 0.00 0.00 0.00 5.28
1447 1475 1.890489 GTGGTAAAAATCTGGCGGGTT 59.110 47.619 0.00 0.00 0.00 4.11
1448 1476 3.083293 GTGGTAAAAATCTGGCGGGTTA 58.917 45.455 0.00 0.00 0.00 2.85
1449 1477 3.083293 TGGTAAAAATCTGGCGGGTTAC 58.917 45.455 0.00 0.00 0.00 2.50
1450 1478 2.424601 GGTAAAAATCTGGCGGGTTACC 59.575 50.000 0.00 3.19 35.20 2.85
1451 1479 2.597578 AAAAATCTGGCGGGTTACCT 57.402 45.000 0.00 0.00 33.28 3.08
1452 1480 2.124277 AAAATCTGGCGGGTTACCTC 57.876 50.000 0.00 0.00 33.28 3.85
1453 1481 1.286248 AAATCTGGCGGGTTACCTCT 58.714 50.000 0.00 0.00 33.28 3.69
1454 1482 0.831307 AATCTGGCGGGTTACCTCTC 59.169 55.000 0.00 0.00 33.28 3.20
1455 1483 1.049289 ATCTGGCGGGTTACCTCTCC 61.049 60.000 0.00 0.85 33.28 3.71
1456 1484 3.072468 TGGCGGGTTACCTCTCCG 61.072 66.667 0.00 0.00 45.84 4.63
1457 1485 3.073101 GGCGGGTTACCTCTCCGT 61.073 66.667 0.00 0.00 44.97 4.69
1458 1486 2.183555 GCGGGTTACCTCTCCGTG 59.816 66.667 0.00 0.00 44.97 4.94
1459 1487 2.345760 GCGGGTTACCTCTCCGTGA 61.346 63.158 0.00 0.00 44.97 4.35
1460 1488 1.509923 CGGGTTACCTCTCCGTGAC 59.490 63.158 0.00 0.00 39.04 3.67
1461 1489 1.246056 CGGGTTACCTCTCCGTGACA 61.246 60.000 0.00 0.00 39.04 3.58
1462 1490 0.531200 GGGTTACCTCTCCGTGACAG 59.469 60.000 0.00 0.00 0.00 3.51
1463 1491 0.108756 GGTTACCTCTCCGTGACAGC 60.109 60.000 0.00 0.00 0.00 4.40
1464 1492 0.108756 GTTACCTCTCCGTGACAGCC 60.109 60.000 0.00 0.00 0.00 4.85
1465 1493 0.251653 TTACCTCTCCGTGACAGCCT 60.252 55.000 0.00 0.00 0.00 4.58
1466 1494 0.622136 TACCTCTCCGTGACAGCCTA 59.378 55.000 0.00 0.00 0.00 3.93
1467 1495 0.966370 ACCTCTCCGTGACAGCCTAC 60.966 60.000 0.00 0.00 0.00 3.18
1468 1496 0.681564 CCTCTCCGTGACAGCCTACT 60.682 60.000 0.00 0.00 0.00 2.57
1469 1497 1.178276 CTCTCCGTGACAGCCTACTT 58.822 55.000 0.00 0.00 0.00 2.24
1470 1498 0.888619 TCTCCGTGACAGCCTACTTG 59.111 55.000 0.00 0.00 0.00 3.16
1471 1499 0.888619 CTCCGTGACAGCCTACTTGA 59.111 55.000 0.00 0.00 0.00 3.02
1529 2738 2.365617 ACGAACTCTGTTGACTGTGGAT 59.634 45.455 0.00 0.00 0.00 3.41
1530 2739 3.572682 ACGAACTCTGTTGACTGTGGATA 59.427 43.478 0.00 0.00 0.00 2.59
1531 2740 3.921021 CGAACTCTGTTGACTGTGGATAC 59.079 47.826 0.00 0.00 0.00 2.24
1572 2790 1.104630 GTAGCCGGAACAGCTAGAGT 58.895 55.000 5.05 0.00 43.26 3.24
1575 2793 2.389715 AGCCGGAACAGCTAGAGTTAT 58.610 47.619 5.05 0.00 39.29 1.89
1577 2795 3.958798 AGCCGGAACAGCTAGAGTTATAA 59.041 43.478 5.05 0.00 39.29 0.98
1600 2818 6.683974 AATCAGCAGCGATTTATTAGTTGT 57.316 33.333 6.64 0.00 31.45 3.32
1605 2823 6.630443 CAGCAGCGATTTATTAGTTGTTGATC 59.370 38.462 0.00 0.00 31.35 2.92
1609 2827 7.011389 CAGCGATTTATTAGTTGTTGATCTCCA 59.989 37.037 0.00 0.00 0.00 3.86
1625 2843 3.470709 TCTCCAGTGCTGTTTTCTTCAG 58.529 45.455 0.00 0.00 36.18 3.02
1659 2877 9.809395 ACCTAAATACTAGATAGTGTAGATGCA 57.191 33.333 0.00 0.00 37.10 3.96
1669 2887 3.198068 AGTGTAGATGCACTATTTGGCG 58.802 45.455 1.42 0.00 46.68 5.69
1670 2888 3.118775 AGTGTAGATGCACTATTTGGCGA 60.119 43.478 1.42 0.00 46.68 5.54
1671 2889 3.621268 GTGTAGATGCACTATTTGGCGAA 59.379 43.478 0.00 0.00 36.51 4.70
1672 2890 3.871006 TGTAGATGCACTATTTGGCGAAG 59.129 43.478 0.00 0.00 33.39 3.79
1673 2891 3.303395 GTAGATGCACTATTTGGCGAAGC 60.303 47.826 0.00 0.00 43.01 3.86
1697 2915 2.356313 CACGCACTCGAGCCACTT 60.356 61.111 13.61 0.00 39.41 3.16
1698 2916 2.356313 ACGCACTCGAGCCACTTG 60.356 61.111 13.61 3.76 39.41 3.16
1699 2917 2.049156 CGCACTCGAGCCACTTGA 60.049 61.111 13.61 0.00 38.10 3.02
1700 2918 1.446792 CGCACTCGAGCCACTTGAT 60.447 57.895 13.61 0.00 38.10 2.57
1701 2919 1.690283 CGCACTCGAGCCACTTGATG 61.690 60.000 13.61 1.33 38.10 3.07
1702 2920 1.975363 GCACTCGAGCCACTTGATGC 61.975 60.000 13.61 8.53 0.00 3.91
1703 2921 1.446792 ACTCGAGCCACTTGATGCG 60.447 57.895 13.61 0.00 0.00 4.73
1704 2922 2.125552 TCGAGCCACTTGATGCGG 60.126 61.111 0.00 0.00 0.00 5.69
1705 2923 3.869272 CGAGCCACTTGATGCGGC 61.869 66.667 0.00 0.00 43.89 6.53
1708 2926 3.869272 GCCACTTGATGCGGCTCG 61.869 66.667 0.00 0.00 40.56 5.03
1709 2927 2.125552 CCACTTGATGCGGCTCGA 60.126 61.111 0.00 0.00 0.00 4.04
1710 2928 1.522355 CCACTTGATGCGGCTCGAT 60.522 57.895 0.00 0.00 0.00 3.59
1711 2929 1.493950 CCACTTGATGCGGCTCGATC 61.494 60.000 0.00 0.00 0.00 3.69
1712 2930 0.529337 CACTTGATGCGGCTCGATCT 60.529 55.000 0.00 0.00 0.00 2.75
1713 2931 0.249238 ACTTGATGCGGCTCGATCTC 60.249 55.000 0.00 0.00 0.00 2.75
1714 2932 0.943359 CTTGATGCGGCTCGATCTCC 60.943 60.000 0.00 0.00 0.00 3.71
1715 2933 2.048690 GATGCGGCTCGATCTCCC 60.049 66.667 0.00 0.00 0.00 4.30
1716 2934 3.905705 GATGCGGCTCGATCTCCCG 62.906 68.421 0.00 10.16 44.58 5.14
1718 2936 4.632458 GCGGCTCGATCTCCCGAC 62.632 72.222 16.52 6.88 44.55 4.79
1719 2937 3.209812 CGGCTCGATCTCCCGACA 61.210 66.667 9.19 0.00 44.55 4.35
1720 2938 2.771639 CGGCTCGATCTCCCGACAA 61.772 63.158 9.19 0.00 44.55 3.18
1721 2939 1.066587 GGCTCGATCTCCCGACAAG 59.933 63.158 0.00 0.00 34.56 3.16
1722 2940 1.668101 GGCTCGATCTCCCGACAAGT 61.668 60.000 0.00 0.00 34.56 3.16
1723 2941 0.526524 GCTCGATCTCCCGACAAGTG 60.527 60.000 0.00 0.00 34.56 3.16
1724 2942 0.526524 CTCGATCTCCCGACAAGTGC 60.527 60.000 0.00 0.00 34.56 4.40
1725 2943 1.215382 CGATCTCCCGACAAGTGCA 59.785 57.895 0.00 0.00 0.00 4.57
1726 2944 0.803768 CGATCTCCCGACAAGTGCAG 60.804 60.000 0.00 0.00 0.00 4.41
1727 2945 1.078848 ATCTCCCGACAAGTGCAGC 60.079 57.895 0.00 0.00 0.00 5.25
1728 2946 1.548357 ATCTCCCGACAAGTGCAGCT 61.548 55.000 0.00 0.00 0.00 4.24
1729 2947 2.031012 TCCCGACAAGTGCAGCTG 59.969 61.111 10.11 10.11 0.00 4.24
1730 2948 3.052082 CCCGACAAGTGCAGCTGG 61.052 66.667 17.12 0.00 0.00 4.85
1731 2949 2.281070 CCGACAAGTGCAGCTGGT 60.281 61.111 17.12 3.76 33.05 4.00
1732 2950 2.610694 CCGACAAGTGCAGCTGGTG 61.611 63.158 17.12 1.76 29.75 4.17
1733 2951 1.889105 CGACAAGTGCAGCTGGTGT 60.889 57.895 17.12 0.00 29.75 4.16
1734 2952 1.650912 GACAAGTGCAGCTGGTGTG 59.349 57.895 17.12 1.36 29.75 3.82
1735 2953 0.815213 GACAAGTGCAGCTGGTGTGA 60.815 55.000 17.12 0.00 29.75 3.58
1736 2954 1.097547 ACAAGTGCAGCTGGTGTGAC 61.098 55.000 17.12 5.96 28.09 3.67
1737 2955 1.889105 AAGTGCAGCTGGTGTGACG 60.889 57.895 17.12 0.00 0.00 4.35
1738 2956 4.017877 GTGCAGCTGGTGTGACGC 62.018 66.667 17.12 0.00 0.00 5.19
1739 2957 4.544047 TGCAGCTGGTGTGACGCA 62.544 61.111 17.12 0.69 0.00 5.24
1740 2958 3.052082 GCAGCTGGTGTGACGCAT 61.052 61.111 17.12 0.00 0.00 4.73
1741 2959 2.865308 CAGCTGGTGTGACGCATG 59.135 61.111 5.57 0.00 0.00 4.06
1742 2960 2.359107 AGCTGGTGTGACGCATGG 60.359 61.111 0.00 0.00 0.00 3.66
1743 2961 3.434319 GCTGGTGTGACGCATGGG 61.434 66.667 8.44 8.44 0.00 4.00
1744 2962 2.347114 CTGGTGTGACGCATGGGA 59.653 61.111 17.76 0.00 0.00 4.37
1745 2963 2.031919 TGGTGTGACGCATGGGAC 59.968 61.111 17.76 11.18 0.00 4.46
1746 2964 2.347490 GGTGTGACGCATGGGACT 59.653 61.111 17.76 0.00 0.00 3.85
1747 2965 1.188871 TGGTGTGACGCATGGGACTA 61.189 55.000 17.76 0.00 0.00 2.59
1748 2966 0.178068 GGTGTGACGCATGGGACTAT 59.822 55.000 17.76 0.00 0.00 2.12
1749 2967 1.406887 GGTGTGACGCATGGGACTATT 60.407 52.381 17.76 0.00 0.00 1.73
1750 2968 2.159014 GGTGTGACGCATGGGACTATTA 60.159 50.000 17.76 0.00 0.00 0.98
1751 2969 3.527533 GTGTGACGCATGGGACTATTAA 58.472 45.455 17.76 0.00 0.00 1.40
1752 2970 3.308866 GTGTGACGCATGGGACTATTAAC 59.691 47.826 17.76 4.88 0.00 2.01
1753 2971 3.055747 TGTGACGCATGGGACTATTAACA 60.056 43.478 17.76 7.43 0.00 2.41
1754 2972 3.308866 GTGACGCATGGGACTATTAACAC 59.691 47.826 17.76 8.87 0.00 3.32
1755 2973 3.055747 TGACGCATGGGACTATTAACACA 60.056 43.478 17.76 0.00 0.00 3.72
1756 2974 3.531538 ACGCATGGGACTATTAACACAG 58.468 45.455 17.76 0.00 0.00 3.66
1757 2975 3.196901 ACGCATGGGACTATTAACACAGA 59.803 43.478 17.76 0.00 0.00 3.41
1758 2976 4.141711 ACGCATGGGACTATTAACACAGAT 60.142 41.667 17.76 0.00 0.00 2.90
1759 2977 4.212004 CGCATGGGACTATTAACACAGATG 59.788 45.833 3.11 0.00 0.00 2.90
1760 2978 5.368145 GCATGGGACTATTAACACAGATGA 58.632 41.667 0.00 0.00 0.00 2.92
1761 2979 6.000219 GCATGGGACTATTAACACAGATGAT 59.000 40.000 0.00 0.00 0.00 2.45
1762 2980 6.072838 GCATGGGACTATTAACACAGATGATG 60.073 42.308 0.00 0.00 0.00 3.07
1763 2981 5.928976 TGGGACTATTAACACAGATGATGG 58.071 41.667 0.00 0.00 0.00 3.51
1764 2982 5.428457 TGGGACTATTAACACAGATGATGGT 59.572 40.000 0.00 0.00 0.00 3.55
1765 2983 6.613679 TGGGACTATTAACACAGATGATGGTA 59.386 38.462 0.00 0.00 0.00 3.25
1766 2984 7.155328 GGGACTATTAACACAGATGATGGTAG 58.845 42.308 0.00 0.00 0.00 3.18
1767 2985 6.647067 GGACTATTAACACAGATGATGGTAGC 59.353 42.308 0.00 0.00 0.00 3.58
1768 2986 7.124573 ACTATTAACACAGATGATGGTAGCA 57.875 36.000 0.00 0.00 0.00 3.49
1769 2987 7.739825 ACTATTAACACAGATGATGGTAGCAT 58.260 34.615 7.23 7.23 0.00 3.79
1770 2988 6.872628 ATTAACACAGATGATGGTAGCATG 57.127 37.500 13.10 1.16 0.00 4.06
1771 2989 3.920231 ACACAGATGATGGTAGCATGT 57.080 42.857 13.10 1.87 0.00 3.21
1772 2990 3.538591 ACACAGATGATGGTAGCATGTG 58.461 45.455 19.04 19.04 41.31 3.21
1773 2991 2.876550 CACAGATGATGGTAGCATGTGG 59.123 50.000 13.10 0.02 40.25 4.17
1774 2992 2.158711 ACAGATGATGGTAGCATGTGGG 60.159 50.000 13.10 0.73 40.25 4.61
1775 2993 1.422781 AGATGATGGTAGCATGTGGGG 59.577 52.381 13.10 0.00 0.00 4.96
1776 2994 1.421268 GATGATGGTAGCATGTGGGGA 59.579 52.381 13.10 0.00 0.00 4.81
1777 2995 0.546122 TGATGGTAGCATGTGGGGAC 59.454 55.000 13.10 0.00 0.00 4.46
1791 3009 4.408821 GGACCATGCCCTCGTGCA 62.409 66.667 0.02 0.02 46.94 4.57
1797 3015 3.640761 TGCCCTCGTGCATATGGA 58.359 55.556 4.56 0.00 36.04 3.41
1798 3016 2.144952 TGCCCTCGTGCATATGGAT 58.855 52.632 4.56 0.00 36.04 3.41
1799 3017 1.347062 TGCCCTCGTGCATATGGATA 58.653 50.000 4.56 0.00 36.04 2.59
1800 3018 1.276138 TGCCCTCGTGCATATGGATAG 59.724 52.381 4.56 3.90 36.04 2.08
1801 3019 2.009042 GCCCTCGTGCATATGGATAGC 61.009 57.143 4.56 0.00 0.00 2.97
1802 3020 1.633561 CCTCGTGCATATGGATAGCG 58.366 55.000 4.56 2.06 0.00 4.26
1803 3021 1.633561 CTCGTGCATATGGATAGCGG 58.366 55.000 4.56 0.00 0.00 5.52
1804 3022 0.246360 TCGTGCATATGGATAGCGGG 59.754 55.000 4.56 0.00 0.00 6.13
1805 3023 1.361668 CGTGCATATGGATAGCGGGC 61.362 60.000 4.56 0.00 0.00 6.13
1806 3024 1.079197 TGCATATGGATAGCGGGCG 60.079 57.895 4.56 0.00 0.00 6.13
1807 3025 2.464459 GCATATGGATAGCGGGCGC 61.464 63.158 0.00 0.00 42.33 6.53
1808 3026 1.815421 CATATGGATAGCGGGCGCC 60.815 63.158 21.18 21.18 43.17 6.53
1809 3027 1.990060 ATATGGATAGCGGGCGCCT 60.990 57.895 28.56 9.55 43.17 5.52
1810 3028 0.686441 ATATGGATAGCGGGCGCCTA 60.686 55.000 28.56 11.88 43.17 3.93
1811 3029 0.686441 TATGGATAGCGGGCGCCTAT 60.686 55.000 28.56 16.72 43.17 2.57
1812 3030 1.553690 ATGGATAGCGGGCGCCTATT 61.554 55.000 28.56 14.17 43.17 1.73
1813 3031 1.448013 GGATAGCGGGCGCCTATTC 60.448 63.158 28.56 11.70 43.17 1.75
1814 3032 1.292223 GATAGCGGGCGCCTATTCA 59.708 57.895 28.56 8.63 43.17 2.57
1815 3033 1.004918 ATAGCGGGCGCCTATTCAC 60.005 57.895 28.56 7.30 43.17 3.18
1816 3034 1.754380 ATAGCGGGCGCCTATTCACA 61.754 55.000 28.56 5.71 43.17 3.58
1817 3035 1.754380 TAGCGGGCGCCTATTCACAT 61.754 55.000 28.56 6.53 43.17 3.21
1818 3036 2.896801 GCGGGCGCCTATTCACATG 61.897 63.158 28.56 6.14 34.56 3.21
1819 3037 2.896801 CGGGCGCCTATTCACATGC 61.897 63.158 28.56 3.90 0.00 4.06
1820 3038 1.823470 GGGCGCCTATTCACATGCA 60.823 57.895 28.56 0.00 0.00 3.96
1821 3039 1.174712 GGGCGCCTATTCACATGCAT 61.175 55.000 28.56 0.00 0.00 3.96
1822 3040 0.039798 GGCGCCTATTCACATGCATG 60.040 55.000 25.09 25.09 0.00 4.06
1823 3041 0.664761 GCGCCTATTCACATGCATGT 59.335 50.000 26.61 26.61 42.84 3.21
1824 3042 1.066002 GCGCCTATTCACATGCATGTT 59.934 47.619 29.48 17.86 39.39 2.71
1825 3043 2.480073 GCGCCTATTCACATGCATGTTT 60.480 45.455 29.48 18.63 39.39 2.83
1826 3044 3.772932 CGCCTATTCACATGCATGTTTT 58.227 40.909 29.48 18.29 39.39 2.43
1827 3045 3.548668 CGCCTATTCACATGCATGTTTTG 59.451 43.478 29.48 18.43 39.39 2.44
1828 3046 4.674885 CGCCTATTCACATGCATGTTTTGA 60.675 41.667 29.48 20.41 39.39 2.69
1829 3047 4.563976 GCCTATTCACATGCATGTTTTGAC 59.436 41.667 29.48 12.13 39.39 3.18
1830 3048 4.794762 CCTATTCACATGCATGTTTTGACG 59.205 41.667 29.48 16.92 39.39 4.35
1831 3049 3.706802 TTCACATGCATGTTTTGACGT 57.293 38.095 29.48 2.70 39.39 4.34
1832 3050 3.706802 TCACATGCATGTTTTGACGTT 57.293 38.095 29.48 1.90 39.39 3.99
1833 3051 3.370276 TCACATGCATGTTTTGACGTTG 58.630 40.909 29.48 14.83 39.39 4.10
1834 3052 2.097299 CACATGCATGTTTTGACGTTGC 60.097 45.455 29.48 0.00 39.39 4.17
1835 3053 2.223782 ACATGCATGTTTTGACGTTGCT 60.224 40.909 26.61 0.00 37.90 3.91
1836 3054 2.118228 TGCATGTTTTGACGTTGCTC 57.882 45.000 7.56 0.00 0.00 4.26
1837 3055 1.044725 GCATGTTTTGACGTTGCTCG 58.955 50.000 0.00 0.84 46.00 5.03
1848 3066 2.867456 CGTTGCTCGTTTATTCCGTT 57.133 45.000 0.00 0.00 34.52 4.44
1849 3067 3.177605 CGTTGCTCGTTTATTCCGTTT 57.822 42.857 0.00 0.00 34.52 3.60
1850 3068 3.150731 CGTTGCTCGTTTATTCCGTTTC 58.849 45.455 0.00 0.00 34.52 2.78
1851 3069 3.363182 CGTTGCTCGTTTATTCCGTTTCA 60.363 43.478 0.00 0.00 34.52 2.69
1852 3070 4.148891 GTTGCTCGTTTATTCCGTTTCAG 58.851 43.478 0.00 0.00 0.00 3.02
1853 3071 3.395639 TGCTCGTTTATTCCGTTTCAGT 58.604 40.909 0.00 0.00 0.00 3.41
1854 3072 3.810941 TGCTCGTTTATTCCGTTTCAGTT 59.189 39.130 0.00 0.00 0.00 3.16
1855 3073 4.273969 TGCTCGTTTATTCCGTTTCAGTTT 59.726 37.500 0.00 0.00 0.00 2.66
1856 3074 5.209977 GCTCGTTTATTCCGTTTCAGTTTT 58.790 37.500 0.00 0.00 0.00 2.43
1857 3075 5.684184 GCTCGTTTATTCCGTTTCAGTTTTT 59.316 36.000 0.00 0.00 0.00 1.94
1878 3096 7.840342 TTTTTCAAAAAGCTACAGCATTTGA 57.160 28.000 21.42 21.42 46.90 2.69
1881 3099 5.288804 TCAAAAAGCTACAGCATTTGAACC 58.711 37.500 22.31 0.00 46.28 3.62
1882 3100 3.559238 AAAGCTACAGCATTTGAACCG 57.441 42.857 3.70 0.00 45.16 4.44
1883 3101 2.472695 AGCTACAGCATTTGAACCGA 57.527 45.000 3.70 0.00 45.16 4.69
1884 3102 2.350522 AGCTACAGCATTTGAACCGAG 58.649 47.619 3.70 0.00 45.16 4.63
1885 3103 2.076863 GCTACAGCATTTGAACCGAGT 58.923 47.619 0.00 0.00 41.59 4.18
1886 3104 2.159653 GCTACAGCATTTGAACCGAGTG 60.160 50.000 0.00 0.00 41.59 3.51
1887 3105 1.967319 ACAGCATTTGAACCGAGTGT 58.033 45.000 0.00 0.00 0.00 3.55
1888 3106 1.873591 ACAGCATTTGAACCGAGTGTC 59.126 47.619 0.00 0.00 0.00 3.67
1889 3107 1.872952 CAGCATTTGAACCGAGTGTCA 59.127 47.619 0.00 0.00 0.00 3.58
1890 3108 2.096069 CAGCATTTGAACCGAGTGTCAG 60.096 50.000 0.00 0.00 0.00 3.51
1891 3109 2.143122 GCATTTGAACCGAGTGTCAGA 58.857 47.619 0.00 0.00 0.00 3.27
1892 3110 2.548057 GCATTTGAACCGAGTGTCAGAA 59.452 45.455 0.00 0.00 0.00 3.02
1893 3111 3.607078 GCATTTGAACCGAGTGTCAGAAC 60.607 47.826 0.00 0.00 0.00 3.01
1894 3112 3.536956 TTTGAACCGAGTGTCAGAACT 57.463 42.857 0.00 0.00 0.00 3.01
1895 3113 4.659111 TTTGAACCGAGTGTCAGAACTA 57.341 40.909 0.00 0.00 0.00 2.24
1896 3114 4.659111 TTGAACCGAGTGTCAGAACTAA 57.341 40.909 0.00 0.00 0.00 2.24
1897 3115 4.238761 TGAACCGAGTGTCAGAACTAAG 57.761 45.455 0.00 0.00 0.00 2.18
1898 3116 3.887110 TGAACCGAGTGTCAGAACTAAGA 59.113 43.478 0.00 0.00 0.00 2.10
1899 3117 4.340097 TGAACCGAGTGTCAGAACTAAGAA 59.660 41.667 0.00 0.00 0.00 2.52
1900 3118 4.240175 ACCGAGTGTCAGAACTAAGAAC 57.760 45.455 0.00 0.00 0.00 3.01
1901 3119 3.890147 ACCGAGTGTCAGAACTAAGAACT 59.110 43.478 0.00 0.00 0.00 3.01
1902 3120 5.068636 ACCGAGTGTCAGAACTAAGAACTA 58.931 41.667 0.00 0.00 0.00 2.24
1903 3121 5.711036 ACCGAGTGTCAGAACTAAGAACTAT 59.289 40.000 0.00 0.00 0.00 2.12
1904 3122 6.208994 ACCGAGTGTCAGAACTAAGAACTATT 59.791 38.462 0.00 0.00 0.00 1.73
1905 3123 7.091443 CCGAGTGTCAGAACTAAGAACTATTT 58.909 38.462 0.00 0.00 0.00 1.40
1906 3124 7.599245 CCGAGTGTCAGAACTAAGAACTATTTT 59.401 37.037 0.00 0.00 0.00 1.82
1907 3125 8.640291 CGAGTGTCAGAACTAAGAACTATTTTC 58.360 37.037 0.00 0.00 0.00 2.29
1908 3126 9.477484 GAGTGTCAGAACTAAGAACTATTTTCA 57.523 33.333 0.00 0.00 0.00 2.69
1909 3127 9.262358 AGTGTCAGAACTAAGAACTATTTTCAC 57.738 33.333 0.00 0.00 0.00 3.18
1910 3128 8.496751 GTGTCAGAACTAAGAACTATTTTCACC 58.503 37.037 0.00 0.00 0.00 4.02
1911 3129 7.660208 TGTCAGAACTAAGAACTATTTTCACCC 59.340 37.037 0.00 0.00 0.00 4.61
1912 3130 7.878644 GTCAGAACTAAGAACTATTTTCACCCT 59.121 37.037 0.00 0.00 0.00 4.34
1913 3131 8.437575 TCAGAACTAAGAACTATTTTCACCCTT 58.562 33.333 0.00 0.00 0.00 3.95
1914 3132 8.507249 CAGAACTAAGAACTATTTTCACCCTTG 58.493 37.037 0.00 0.00 0.00 3.61
1915 3133 7.665974 AGAACTAAGAACTATTTTCACCCTTGG 59.334 37.037 0.00 0.00 0.00 3.61
1916 3134 7.086685 ACTAAGAACTATTTTCACCCTTGGA 57.913 36.000 0.00 0.00 0.00 3.53
1917 3135 7.699878 ACTAAGAACTATTTTCACCCTTGGAT 58.300 34.615 0.00 0.00 0.00 3.41
1918 3136 8.170730 ACTAAGAACTATTTTCACCCTTGGATT 58.829 33.333 0.00 0.00 0.00 3.01
1919 3137 7.855784 AAGAACTATTTTCACCCTTGGATTT 57.144 32.000 0.00 0.00 0.00 2.17
1920 3138 7.468141 AGAACTATTTTCACCCTTGGATTTC 57.532 36.000 0.00 0.00 0.00 2.17
1921 3139 7.241628 AGAACTATTTTCACCCTTGGATTTCT 58.758 34.615 0.00 0.00 0.00 2.52
1922 3140 7.394641 AGAACTATTTTCACCCTTGGATTTCTC 59.605 37.037 0.00 0.00 0.00 2.87
1923 3141 6.552008 ACTATTTTCACCCTTGGATTTCTCA 58.448 36.000 0.00 0.00 0.00 3.27
1924 3142 7.184862 ACTATTTTCACCCTTGGATTTCTCAT 58.815 34.615 0.00 0.00 0.00 2.90
1925 3143 5.726980 TTTTCACCCTTGGATTTCTCATG 57.273 39.130 0.00 0.00 0.00 3.07
1926 3144 4.656100 TTCACCCTTGGATTTCTCATGA 57.344 40.909 0.00 0.00 0.00 3.07
1927 3145 3.955471 TCACCCTTGGATTTCTCATGAC 58.045 45.455 0.00 0.00 0.00 3.06
1928 3146 3.019564 CACCCTTGGATTTCTCATGACC 58.980 50.000 0.00 0.00 0.00 4.02
1929 3147 2.649312 ACCCTTGGATTTCTCATGACCA 59.351 45.455 0.00 0.00 0.00 4.02
1930 3148 3.285484 CCCTTGGATTTCTCATGACCAG 58.715 50.000 2.59 0.00 32.16 4.00
1931 3149 2.686915 CCTTGGATTTCTCATGACCAGC 59.313 50.000 2.59 0.00 32.16 4.85
1932 3150 2.425143 TGGATTTCTCATGACCAGCC 57.575 50.000 0.00 0.00 0.00 4.85
1933 3151 1.064463 TGGATTTCTCATGACCAGCCC 60.064 52.381 0.00 0.00 0.00 5.19
1934 3152 1.213926 GGATTTCTCATGACCAGCCCT 59.786 52.381 0.00 0.00 0.00 5.19
1935 3153 2.357569 GGATTTCTCATGACCAGCCCTT 60.358 50.000 0.00 0.00 0.00 3.95
1936 3154 2.496899 TTTCTCATGACCAGCCCTTC 57.503 50.000 0.00 0.00 0.00 3.46
1937 3155 1.361204 TTCTCATGACCAGCCCTTCA 58.639 50.000 0.00 0.00 0.00 3.02
1938 3156 1.361204 TCTCATGACCAGCCCTTCAA 58.639 50.000 0.00 0.00 0.00 2.69
1939 3157 1.280133 TCTCATGACCAGCCCTTCAAG 59.720 52.381 0.00 0.00 0.00 3.02
1940 3158 1.280133 CTCATGACCAGCCCTTCAAGA 59.720 52.381 0.00 0.00 0.00 3.02
1941 3159 1.003580 TCATGACCAGCCCTTCAAGAC 59.996 52.381 0.00 0.00 0.00 3.01
1942 3160 1.004044 CATGACCAGCCCTTCAAGACT 59.996 52.381 0.00 0.00 0.00 3.24
1943 3161 2.024176 TGACCAGCCCTTCAAGACTA 57.976 50.000 0.00 0.00 0.00 2.59
1944 3162 1.902508 TGACCAGCCCTTCAAGACTAG 59.097 52.381 0.00 0.00 0.00 2.57
1945 3163 1.208293 GACCAGCCCTTCAAGACTAGG 59.792 57.143 0.00 0.00 0.00 3.02
1949 3167 3.419154 CCCTTCAAGACTAGGGGGT 57.581 57.895 1.16 0.00 46.21 4.95
1950 3168 1.670059 CCCTTCAAGACTAGGGGGTT 58.330 55.000 1.16 0.00 46.21 4.11
1951 3169 1.282157 CCCTTCAAGACTAGGGGGTTG 59.718 57.143 1.16 0.00 46.21 3.77
1952 3170 1.985895 CCTTCAAGACTAGGGGGTTGT 59.014 52.381 0.00 0.00 0.00 3.32
1953 3171 2.375509 CCTTCAAGACTAGGGGGTTGTT 59.624 50.000 0.00 0.00 0.00 2.83
1954 3172 3.181433 CCTTCAAGACTAGGGGGTTGTTT 60.181 47.826 0.00 0.00 0.00 2.83
1955 3173 3.502123 TCAAGACTAGGGGGTTGTTTG 57.498 47.619 0.00 0.00 0.00 2.93
1956 3174 2.107552 TCAAGACTAGGGGGTTGTTTGG 59.892 50.000 0.00 0.00 0.00 3.28
1957 3175 1.829138 AGACTAGGGGGTTGTTTGGT 58.171 50.000 0.00 0.00 0.00 3.67
1958 3176 1.423921 AGACTAGGGGGTTGTTTGGTG 59.576 52.381 0.00 0.00 0.00 4.17
1959 3177 0.481128 ACTAGGGGGTTGTTTGGTGG 59.519 55.000 0.00 0.00 0.00 4.61
1960 3178 0.774908 CTAGGGGGTTGTTTGGTGGA 59.225 55.000 0.00 0.00 0.00 4.02
1961 3179 1.357761 CTAGGGGGTTGTTTGGTGGAT 59.642 52.381 0.00 0.00 0.00 3.41
1962 3180 0.178935 AGGGGGTTGTTTGGTGGATG 60.179 55.000 0.00 0.00 0.00 3.51
1963 3181 0.471022 GGGGGTTGTTTGGTGGATGT 60.471 55.000 0.00 0.00 0.00 3.06
1964 3182 0.966179 GGGGTTGTTTGGTGGATGTC 59.034 55.000 0.00 0.00 0.00 3.06
1965 3183 0.966179 GGGTTGTTTGGTGGATGTCC 59.034 55.000 0.00 0.00 0.00 4.02
1966 3184 1.480498 GGGTTGTTTGGTGGATGTCCT 60.480 52.381 0.09 0.00 36.82 3.85
1967 3185 1.613437 GGTTGTTTGGTGGATGTCCTG 59.387 52.381 0.09 0.00 36.82 3.86
1968 3186 1.000274 GTTGTTTGGTGGATGTCCTGC 60.000 52.381 0.09 0.00 36.82 4.85
1969 3187 0.184692 TGTTTGGTGGATGTCCTGCA 59.815 50.000 0.09 0.00 36.82 4.41
1970 3188 0.598065 GTTTGGTGGATGTCCTGCAC 59.402 55.000 0.09 0.00 44.87 4.57
1971 3189 0.888736 TTTGGTGGATGTCCTGCACG 60.889 55.000 0.09 0.00 46.43 5.34
1972 3190 3.127533 GGTGGATGTCCTGCACGC 61.128 66.667 0.09 0.00 46.43 5.34
1973 3191 2.358615 GTGGATGTCCTGCACGCA 60.359 61.111 0.09 0.00 36.41 5.24
1974 3192 2.046988 TGGATGTCCTGCACGCAG 60.047 61.111 12.17 12.17 43.26 5.18
1975 3193 3.503363 GGATGTCCTGCACGCAGC 61.503 66.667 13.65 1.75 42.35 5.25
1998 3216 2.963854 CTGCACGCAGCTATCCGG 60.964 66.667 6.03 0.00 45.94 5.14
2022 3240 3.168271 CCGAGTTGCACGGTGATG 58.832 61.111 13.29 0.00 44.57 3.07
2023 3241 2.476051 CGAGTTGCACGGTGATGC 59.524 61.111 13.29 0.00 46.32 3.91
2030 3248 3.043713 CACGGTGATGCGTGCAGT 61.044 61.111 0.74 0.00 0.00 4.40
2031 3249 2.280797 ACGGTGATGCGTGCAGTT 60.281 55.556 0.00 0.00 0.00 3.16
2032 3250 1.891919 ACGGTGATGCGTGCAGTTT 60.892 52.632 0.00 0.00 0.00 2.66
2033 3251 1.440850 CGGTGATGCGTGCAGTTTG 60.441 57.895 0.00 0.00 0.00 2.93
2034 3252 1.840630 CGGTGATGCGTGCAGTTTGA 61.841 55.000 0.00 0.00 0.00 2.69
2035 3253 0.523072 GGTGATGCGTGCAGTTTGAT 59.477 50.000 0.00 0.00 0.00 2.57
2036 3254 1.068333 GGTGATGCGTGCAGTTTGATT 60.068 47.619 0.00 0.00 0.00 2.57
2037 3255 2.607771 GGTGATGCGTGCAGTTTGATTT 60.608 45.455 0.00 0.00 0.00 2.17
2038 3256 2.406024 GTGATGCGTGCAGTTTGATTTG 59.594 45.455 0.00 0.00 0.00 2.32
2039 3257 1.387756 GATGCGTGCAGTTTGATTTGC 59.612 47.619 0.00 0.00 40.67 3.68
2052 3270 4.970472 TTGATTTGCAAAAGCGCTAAAG 57.030 36.364 17.19 4.15 32.46 1.85
2053 3271 2.730928 TGATTTGCAAAAGCGCTAAAGC 59.269 40.909 17.19 15.75 30.63 3.51
2054 3272 2.215907 TTTGCAAAAGCGCTAAAGCA 57.784 40.000 21.74 21.74 42.21 3.91
2055 3273 1.769733 TTGCAAAAGCGCTAAAGCAG 58.230 45.000 23.46 8.69 42.21 4.24
2056 3274 0.667993 TGCAAAAGCGCTAAAGCAGT 59.332 45.000 21.74 0.00 42.21 4.40
2057 3275 1.055338 GCAAAAGCGCTAAAGCAGTG 58.945 50.000 12.05 2.34 42.21 3.66
2058 3276 1.334960 GCAAAAGCGCTAAAGCAGTGA 60.335 47.619 12.05 0.00 42.21 3.41
2059 3277 2.669391 GCAAAAGCGCTAAAGCAGTGAT 60.669 45.455 12.05 0.00 42.21 3.06
2060 3278 3.426159 GCAAAAGCGCTAAAGCAGTGATA 60.426 43.478 12.05 0.00 42.21 2.15
2061 3279 4.091424 CAAAAGCGCTAAAGCAGTGATAC 58.909 43.478 12.05 0.00 42.21 2.24
2062 3280 2.672961 AGCGCTAAAGCAGTGATACA 57.327 45.000 8.99 0.00 42.21 2.29
2063 3281 3.185246 AGCGCTAAAGCAGTGATACAT 57.815 42.857 8.99 0.00 42.21 2.29
2064 3282 4.322080 AGCGCTAAAGCAGTGATACATA 57.678 40.909 8.99 0.00 42.21 2.29
2065 3283 4.302455 AGCGCTAAAGCAGTGATACATAG 58.698 43.478 8.99 0.00 42.21 2.23
2066 3284 4.051922 GCGCTAAAGCAGTGATACATAGT 58.948 43.478 0.00 0.00 42.21 2.12
2067 3285 4.084849 GCGCTAAAGCAGTGATACATAGTG 60.085 45.833 0.00 0.00 42.21 2.74
2068 3286 5.043903 CGCTAAAGCAGTGATACATAGTGT 58.956 41.667 2.44 0.00 42.21 3.55
2069 3287 6.206498 CGCTAAAGCAGTGATACATAGTGTA 58.794 40.000 2.44 0.00 42.21 2.90
2070 3288 6.695713 CGCTAAAGCAGTGATACATAGTGTAA 59.304 38.462 2.44 0.00 42.21 2.41
2071 3289 7.382488 CGCTAAAGCAGTGATACATAGTGTAAT 59.618 37.037 2.44 0.00 42.21 1.89
2072 3290 9.692749 GCTAAAGCAGTGATACATAGTGTAATA 57.307 33.333 0.00 0.00 37.41 0.98
2075 3293 9.534565 AAAGCAGTGATACATAGTGTAATACAG 57.465 33.333 0.00 0.00 36.31 2.74
2076 3294 8.465273 AGCAGTGATACATAGTGTAATACAGA 57.535 34.615 0.00 0.00 36.31 3.41
2077 3295 8.572185 AGCAGTGATACATAGTGTAATACAGAG 58.428 37.037 0.00 0.00 36.31 3.35
2078 3296 8.568794 GCAGTGATACATAGTGTAATACAGAGA 58.431 37.037 0.00 0.00 36.31 3.10
2089 3307 5.910166 GTGTAATACAGAGAGATACACTGCG 59.090 44.000 0.00 0.00 41.78 5.18
2090 3308 5.589050 TGTAATACAGAGAGATACACTGCGT 59.411 40.000 0.00 0.00 40.05 5.24
2091 3309 4.822036 ATACAGAGAGATACACTGCGTC 57.178 45.455 0.00 0.00 40.05 5.19
2092 3310 1.398739 ACAGAGAGATACACTGCGTCG 59.601 52.381 0.00 0.00 40.05 5.12
2093 3311 1.018148 AGAGAGATACACTGCGTCGG 58.982 55.000 0.00 0.00 0.00 4.79
2094 3312 0.029567 GAGAGATACACTGCGTCGGG 59.970 60.000 0.00 0.00 0.00 5.14
2095 3313 0.393944 AGAGATACACTGCGTCGGGA 60.394 55.000 0.00 0.00 0.00 5.14
2096 3314 0.248539 GAGATACACTGCGTCGGGAC 60.249 60.000 0.00 0.00 0.00 4.46
2097 3315 1.226888 GATACACTGCGTCGGGACC 60.227 63.158 0.00 0.00 0.00 4.46
2098 3316 2.931713 GATACACTGCGTCGGGACCG 62.932 65.000 3.96 3.96 41.35 4.79
2118 3336 4.742201 CAGTGGGCTCGGTCCGTG 62.742 72.222 11.88 10.34 0.00 4.94
2121 3339 4.682334 TGGGCTCGGTCCGTGGTA 62.682 66.667 11.88 0.00 0.00 3.25
2122 3340 4.139234 GGGCTCGGTCCGTGGTAC 62.139 72.222 11.88 3.79 0.00 3.34
2123 3341 3.066814 GGCTCGGTCCGTGGTACT 61.067 66.667 11.88 0.00 0.00 2.73
2124 3342 2.643232 GGCTCGGTCCGTGGTACTT 61.643 63.158 11.88 0.00 0.00 2.24
2125 3343 1.445582 GCTCGGTCCGTGGTACTTG 60.446 63.158 11.88 0.00 0.00 3.16
2126 3344 1.962144 CTCGGTCCGTGGTACTTGT 59.038 57.895 11.88 0.00 0.00 3.16
2127 3345 0.109412 CTCGGTCCGTGGTACTTGTC 60.109 60.000 11.88 0.00 0.00 3.18
2128 3346 0.538057 TCGGTCCGTGGTACTTGTCT 60.538 55.000 11.88 0.00 0.00 3.41
2129 3347 0.388134 CGGTCCGTGGTACTTGTCTG 60.388 60.000 2.08 0.00 0.00 3.51
2130 3348 0.037605 GGTCCGTGGTACTTGTCTGG 60.038 60.000 0.00 0.00 0.00 3.86
2131 3349 0.669625 GTCCGTGGTACTTGTCTGGC 60.670 60.000 0.00 0.00 0.00 4.85
2132 3350 1.116536 TCCGTGGTACTTGTCTGGCA 61.117 55.000 0.00 0.00 0.00 4.92
2133 3351 0.949105 CCGTGGTACTTGTCTGGCAC 60.949 60.000 0.00 0.00 0.00 5.01
2134 3352 1.282248 CGTGGTACTTGTCTGGCACG 61.282 60.000 0.00 0.00 0.00 5.34
2135 3353 0.949105 GTGGTACTTGTCTGGCACGG 60.949 60.000 0.00 0.00 0.00 4.94
2136 3354 1.116536 TGGTACTTGTCTGGCACGGA 61.117 55.000 0.00 0.00 44.24 4.69
2143 3361 4.191243 TCTGGCACGGACAAGAGA 57.809 55.556 0.00 0.00 39.80 3.10
2144 3362 1.666011 TCTGGCACGGACAAGAGAC 59.334 57.895 0.00 0.00 39.80 3.36
2145 3363 1.734477 CTGGCACGGACAAGAGACG 60.734 63.158 0.00 0.00 36.31 4.18
2146 3364 2.338984 GGCACGGACAAGAGACGT 59.661 61.111 0.00 0.00 42.17 4.34
2149 3367 2.338984 ACGGACAAGAGACGTGCC 59.661 61.111 0.00 0.00 39.64 5.01
2150 3368 2.432628 CGGACAAGAGACGTGCCC 60.433 66.667 0.00 0.00 0.00 5.36
2151 3369 2.047179 GGACAAGAGACGTGCCCC 60.047 66.667 0.00 0.00 0.00 5.80
2152 3370 2.432628 GACAAGAGACGTGCCCCG 60.433 66.667 0.00 0.00 44.03 5.73
2153 3371 4.681978 ACAAGAGACGTGCCCCGC 62.682 66.667 0.00 0.00 41.42 6.13
2169 3387 4.980903 GCGCGTGGTGCAAAGTGG 62.981 66.667 8.43 0.00 46.97 4.00
2170 3388 4.326766 CGCGTGGTGCAAAGTGGG 62.327 66.667 0.00 0.00 46.97 4.61
2171 3389 4.645921 GCGTGGTGCAAAGTGGGC 62.646 66.667 0.00 0.00 45.45 5.36
2172 3390 3.977244 CGTGGTGCAAAGTGGGCC 61.977 66.667 0.00 0.00 0.00 5.80
2173 3391 2.837291 GTGGTGCAAAGTGGGCCA 60.837 61.111 0.00 0.00 0.00 5.36
2174 3392 2.200930 TGGTGCAAAGTGGGCCAT 59.799 55.556 10.70 0.00 0.00 4.40
2175 3393 1.907807 TGGTGCAAAGTGGGCCATC 60.908 57.895 10.70 3.41 0.00 3.51
2176 3394 2.568090 GTGCAAAGTGGGCCATCG 59.432 61.111 10.70 0.00 0.00 3.84
2177 3395 2.676121 TGCAAAGTGGGCCATCGG 60.676 61.111 10.70 0.74 0.00 4.18
2178 3396 2.676471 GCAAAGTGGGCCATCGGT 60.676 61.111 10.70 0.00 0.00 4.69
2179 3397 2.275380 GCAAAGTGGGCCATCGGTT 61.275 57.895 10.70 0.00 0.00 4.44
2180 3398 1.883021 CAAAGTGGGCCATCGGTTC 59.117 57.895 10.70 0.00 0.00 3.62
2181 3399 0.609131 CAAAGTGGGCCATCGGTTCT 60.609 55.000 10.70 0.00 0.00 3.01
2182 3400 0.322546 AAAGTGGGCCATCGGTTCTC 60.323 55.000 10.70 0.00 0.00 2.87
2183 3401 1.201429 AAGTGGGCCATCGGTTCTCT 61.201 55.000 10.70 0.00 0.00 3.10
2184 3402 1.450312 GTGGGCCATCGGTTCTCTG 60.450 63.158 10.70 0.00 0.00 3.35
2185 3403 2.514824 GGGCCATCGGTTCTCTGC 60.515 66.667 4.39 0.00 0.00 4.26
2186 3404 2.268920 GGCCATCGGTTCTCTGCA 59.731 61.111 0.00 0.00 0.00 4.41
2187 3405 2.109126 GGCCATCGGTTCTCTGCAC 61.109 63.158 0.00 0.00 0.00 4.57
2188 3406 2.456119 GCCATCGGTTCTCTGCACG 61.456 63.158 0.00 0.00 0.00 5.34
2189 3407 1.811266 CCATCGGTTCTCTGCACGG 60.811 63.158 0.00 0.00 0.00 4.94
2190 3408 2.125512 ATCGGTTCTCTGCACGGC 60.126 61.111 0.00 0.00 0.00 5.68
2191 3409 2.650116 ATCGGTTCTCTGCACGGCT 61.650 57.895 0.00 0.00 0.00 5.52
2192 3410 2.842394 ATCGGTTCTCTGCACGGCTG 62.842 60.000 0.00 0.00 0.00 4.85
2193 3411 2.743928 GGTTCTCTGCACGGCTGG 60.744 66.667 0.00 0.00 0.00 4.85
2194 3412 3.426568 GTTCTCTGCACGGCTGGC 61.427 66.667 0.00 0.00 0.00 4.85
2195 3413 4.704833 TTCTCTGCACGGCTGGCC 62.705 66.667 0.00 0.00 0.00 5.36
2209 3427 4.452733 GGCCCCGGTCGTCTGAAG 62.453 72.222 0.00 0.00 0.00 3.02
2211 3429 3.382832 CCCCGGTCGTCTGAAGCT 61.383 66.667 0.00 0.00 0.00 3.74
2212 3430 2.050350 CCCCGGTCGTCTGAAGCTA 61.050 63.158 0.00 0.00 0.00 3.32
2213 3431 1.392710 CCCCGGTCGTCTGAAGCTAT 61.393 60.000 0.00 0.00 0.00 2.97
2214 3432 0.249073 CCCGGTCGTCTGAAGCTATG 60.249 60.000 0.00 0.00 0.00 2.23
2215 3433 0.456221 CCGGTCGTCTGAAGCTATGT 59.544 55.000 0.00 0.00 0.00 2.29
2216 3434 1.674441 CCGGTCGTCTGAAGCTATGTA 59.326 52.381 0.00 0.00 0.00 2.29
2217 3435 2.293677 CCGGTCGTCTGAAGCTATGTAT 59.706 50.000 0.00 0.00 0.00 2.29
2218 3436 3.300857 CGGTCGTCTGAAGCTATGTATG 58.699 50.000 0.00 0.00 0.00 2.39
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
64 65 4.444056 CAGTGTTAATTTTCACAAAGCCCG 59.556 41.667 12.77 0.00 37.07 6.13
91 93 2.497273 TCTGAATCCATGTTGAGAGCGA 59.503 45.455 0.00 0.00 0.00 4.93
160 162 2.218603 CGTGTGGTTTACTCCAAGCTT 58.781 47.619 0.00 0.00 39.34 3.74
508 520 3.647113 AGCTCCTAGCATCATCAGTCAAT 59.353 43.478 1.22 0.00 45.56 2.57
512 524 2.961510 AGAGCTCCTAGCATCATCAGT 58.038 47.619 10.93 0.00 45.56 3.41
556 569 7.147976 GGATGAATTTGTACAGCAGTCTTTTT 58.852 34.615 0.00 0.00 0.00 1.94
557 570 6.568462 CGGATGAATTTGTACAGCAGTCTTTT 60.568 38.462 0.00 0.00 0.00 2.27
558 571 5.106555 CGGATGAATTTGTACAGCAGTCTTT 60.107 40.000 0.00 0.00 0.00 2.52
559 572 4.393062 CGGATGAATTTGTACAGCAGTCTT 59.607 41.667 0.00 0.00 0.00 3.01
560 573 3.935203 CGGATGAATTTGTACAGCAGTCT 59.065 43.478 0.00 0.00 0.00 3.24
561 574 3.684788 ACGGATGAATTTGTACAGCAGTC 59.315 43.478 0.00 0.00 0.00 3.51
562 575 3.674997 ACGGATGAATTTGTACAGCAGT 58.325 40.909 0.00 0.00 0.00 4.40
563 576 5.277490 CCATACGGATGAATTTGTACAGCAG 60.277 44.000 9.91 0.00 34.73 4.24
564 577 4.574421 CCATACGGATGAATTTGTACAGCA 59.426 41.667 9.91 0.00 34.73 4.41
565 578 4.814234 TCCATACGGATGAATTTGTACAGC 59.186 41.667 9.91 0.00 35.91 4.40
566 579 5.050091 GCTCCATACGGATGAATTTGTACAG 60.050 44.000 9.91 0.00 41.79 2.74
567 580 4.814234 GCTCCATACGGATGAATTTGTACA 59.186 41.667 9.91 0.00 41.79 2.90
568 581 4.814234 TGCTCCATACGGATGAATTTGTAC 59.186 41.667 9.91 0.00 41.79 2.90
569 582 5.029807 TGCTCCATACGGATGAATTTGTA 57.970 39.130 9.91 0.00 41.79 2.41
570 583 3.879295 CTGCTCCATACGGATGAATTTGT 59.121 43.478 9.91 0.00 41.79 2.83
571 584 3.304257 GCTGCTCCATACGGATGAATTTG 60.304 47.826 9.91 0.00 41.79 2.32
572 585 2.880890 GCTGCTCCATACGGATGAATTT 59.119 45.455 9.91 0.00 41.79 1.82
573 586 2.105477 AGCTGCTCCATACGGATGAATT 59.895 45.455 9.91 0.00 41.79 2.17
574 587 1.696336 AGCTGCTCCATACGGATGAAT 59.304 47.619 9.91 0.00 41.79 2.57
575 588 1.069204 GAGCTGCTCCATACGGATGAA 59.931 52.381 18.80 0.00 41.79 2.57
576 589 0.676184 GAGCTGCTCCATACGGATGA 59.324 55.000 18.80 0.00 41.79 2.92
577 590 0.665670 CGAGCTGCTCCATACGGATG 60.666 60.000 22.97 0.00 41.79 3.51
613 626 2.575455 AAACGGTGGGAGGTTTGGCA 62.575 55.000 0.00 0.00 35.21 4.92
683 708 0.037139 CAATTGCACATGGTGGGTGG 60.037 55.000 0.00 0.00 36.76 4.61
923 948 1.511318 TTGATTGACGCCGGTGTTGG 61.511 55.000 23.85 0.00 0.00 3.77
925 950 0.816018 TGTTGATTGACGCCGGTGTT 60.816 50.000 23.85 6.26 0.00 3.32
1201 1226 1.408969 GCCTAGCAGAAGAGGTAGCT 58.591 55.000 0.00 0.00 38.06 3.32
1270 1298 6.762661 CACAACAACAAATCCCAGAAAAGAAT 59.237 34.615 0.00 0.00 0.00 2.40
1334 1362 0.378962 CTACAGACCTCGAAGGCTCG 59.621 60.000 0.00 0.00 46.87 5.03
1335 1363 1.465794 ACTACAGACCTCGAAGGCTC 58.534 55.000 0.00 0.00 39.63 4.70
1336 1364 1.546476 CAACTACAGACCTCGAAGGCT 59.454 52.381 0.00 0.00 39.63 4.58
1337 1365 1.544691 TCAACTACAGACCTCGAAGGC 59.455 52.381 1.36 0.00 39.63 4.35
1338 1366 3.487711 CGATCAACTACAGACCTCGAAGG 60.488 52.174 0.00 0.00 42.49 3.46
1339 1367 3.127203 ACGATCAACTACAGACCTCGAAG 59.873 47.826 0.00 0.00 0.00 3.79
1340 1368 3.079578 ACGATCAACTACAGACCTCGAA 58.920 45.455 0.00 0.00 0.00 3.71
1341 1369 2.418976 CACGATCAACTACAGACCTCGA 59.581 50.000 0.00 0.00 0.00 4.04
1382 1410 9.340695 TGAACATGAAACGTATGAATTCAATTC 57.659 29.630 13.09 11.92 36.72 2.17
1418 1446 4.219033 CAGATTTTTACCACGTGCAAGTC 58.781 43.478 10.91 6.26 0.00 3.01
1419 1447 3.004315 CCAGATTTTTACCACGTGCAAGT 59.996 43.478 10.91 5.54 0.00 3.16
1420 1448 3.564511 CCAGATTTTTACCACGTGCAAG 58.435 45.455 10.91 0.00 0.00 4.01
1422 1450 1.268352 GCCAGATTTTTACCACGTGCA 59.732 47.619 10.91 0.00 0.00 4.57
1423 1451 1.727857 CGCCAGATTTTTACCACGTGC 60.728 52.381 10.91 0.00 0.00 5.34
1424 1452 1.135803 CCGCCAGATTTTTACCACGTG 60.136 52.381 9.08 9.08 0.00 4.49
1425 1453 1.161843 CCGCCAGATTTTTACCACGT 58.838 50.000 0.00 0.00 0.00 4.49
1426 1454 0.450184 CCCGCCAGATTTTTACCACG 59.550 55.000 0.00 0.00 0.00 4.94
1427 1455 1.541379 ACCCGCCAGATTTTTACCAC 58.459 50.000 0.00 0.00 0.00 4.16
1428 1456 2.296073 AACCCGCCAGATTTTTACCA 57.704 45.000 0.00 0.00 0.00 3.25
1429 1457 2.424601 GGTAACCCGCCAGATTTTTACC 59.575 50.000 0.00 0.00 33.62 2.85
1430 1458 3.349927 AGGTAACCCGCCAGATTTTTAC 58.650 45.455 0.00 0.00 35.12 2.01
1431 1459 3.264964 AGAGGTAACCCGCCAGATTTTTA 59.735 43.478 0.00 0.00 35.12 1.52
1432 1460 2.041216 AGAGGTAACCCGCCAGATTTTT 59.959 45.455 0.00 0.00 35.12 1.94
1433 1461 1.633945 AGAGGTAACCCGCCAGATTTT 59.366 47.619 0.00 0.00 35.12 1.82
1434 1462 1.209747 GAGAGGTAACCCGCCAGATTT 59.790 52.381 0.00 0.00 35.12 2.17
1435 1463 0.831307 GAGAGGTAACCCGCCAGATT 59.169 55.000 0.00 0.00 35.12 2.40
1436 1464 1.049289 GGAGAGGTAACCCGCCAGAT 61.049 60.000 0.00 0.00 35.12 2.90
1437 1465 1.684734 GGAGAGGTAACCCGCCAGA 60.685 63.158 0.00 0.00 35.12 3.86
1438 1466 2.901042 GGAGAGGTAACCCGCCAG 59.099 66.667 0.00 0.00 35.12 4.85
1439 1467 3.072468 CGGAGAGGTAACCCGCCA 61.072 66.667 0.00 0.00 36.62 5.69
1440 1468 3.073101 ACGGAGAGGTAACCCGCC 61.073 66.667 0.00 0.00 46.54 6.13
1441 1469 2.183555 CACGGAGAGGTAACCCGC 59.816 66.667 0.00 0.00 46.54 6.13
1443 1471 0.531200 CTGTCACGGAGAGGTAACCC 59.469 60.000 0.00 0.00 37.17 4.11
1444 1472 0.108756 GCTGTCACGGAGAGGTAACC 60.109 60.000 0.00 0.00 37.17 2.85
1445 1473 0.108756 GGCTGTCACGGAGAGGTAAC 60.109 60.000 0.00 0.00 0.00 2.50
1446 1474 0.251653 AGGCTGTCACGGAGAGGTAA 60.252 55.000 0.00 0.00 0.00 2.85
1447 1475 0.622136 TAGGCTGTCACGGAGAGGTA 59.378 55.000 0.00 0.00 0.00 3.08
1448 1476 0.966370 GTAGGCTGTCACGGAGAGGT 60.966 60.000 0.00 0.00 0.00 3.85
1449 1477 0.681564 AGTAGGCTGTCACGGAGAGG 60.682 60.000 0.00 0.00 0.00 3.69
1450 1478 1.135257 CAAGTAGGCTGTCACGGAGAG 60.135 57.143 0.00 0.00 0.00 3.20
1451 1479 0.888619 CAAGTAGGCTGTCACGGAGA 59.111 55.000 0.00 0.00 0.00 3.71
1452 1480 0.888619 TCAAGTAGGCTGTCACGGAG 59.111 55.000 0.00 0.00 0.00 4.63
1453 1481 0.888619 CTCAAGTAGGCTGTCACGGA 59.111 55.000 0.00 0.00 0.00 4.69
1454 1482 0.603569 ACTCAAGTAGGCTGTCACGG 59.396 55.000 0.00 0.00 0.00 4.94
1455 1483 2.440539 AACTCAAGTAGGCTGTCACG 57.559 50.000 0.00 0.00 0.00 4.35
1479 1507 5.164620 TGAGATCCTGTATGCACAAGAAA 57.835 39.130 0.00 0.00 33.22 2.52
1482 1510 4.511527 AGTTGAGATCCTGTATGCACAAG 58.488 43.478 0.00 0.00 33.22 3.16
1492 1520 3.192422 AGTTCGTGAGAGTTGAGATCCTG 59.808 47.826 0.00 0.00 43.69 3.86
1493 1521 3.426615 AGTTCGTGAGAGTTGAGATCCT 58.573 45.455 0.00 0.00 43.69 3.24
1499 2708 3.380320 TCAACAGAGTTCGTGAGAGTTGA 59.620 43.478 0.00 0.00 43.48 3.18
1529 2738 2.291209 TGGTCCGTAACAGAGGTGTA 57.709 50.000 0.00 0.00 35.08 2.90
1530 2739 1.275291 CATGGTCCGTAACAGAGGTGT 59.725 52.381 0.00 0.00 39.19 4.16
1531 2740 1.275291 ACATGGTCCGTAACAGAGGTG 59.725 52.381 0.00 0.00 0.00 4.00
1532 2741 1.275291 CACATGGTCCGTAACAGAGGT 59.725 52.381 0.00 0.00 0.00 3.85
1533 2742 1.405526 CCACATGGTCCGTAACAGAGG 60.406 57.143 0.00 0.00 0.00 3.69
1534 2743 2.010145 CCACATGGTCCGTAACAGAG 57.990 55.000 0.00 0.00 0.00 3.35
1559 2777 6.986817 TGCTGATTTATAACTCTAGCTGTTCC 59.013 38.462 18.65 1.96 0.00 3.62
1577 2795 6.683974 ACAACTAATAAATCGCTGCTGATT 57.316 33.333 11.89 11.89 40.22 2.57
1600 2818 4.090761 AGAAAACAGCACTGGAGATCAA 57.909 40.909 2.21 0.00 34.19 2.57
1605 2823 2.551459 CCTGAAGAAAACAGCACTGGAG 59.449 50.000 2.21 0.00 34.47 3.86
1609 2827 3.297134 TTCCCTGAAGAAAACAGCACT 57.703 42.857 0.00 0.00 34.47 4.40
1649 2867 3.194861 TCGCCAAATAGTGCATCTACAC 58.805 45.455 0.00 0.00 41.02 2.90
1650 2868 3.535280 TCGCCAAATAGTGCATCTACA 57.465 42.857 0.00 0.00 0.00 2.74
1651 2869 3.303395 GCTTCGCCAAATAGTGCATCTAC 60.303 47.826 0.00 0.00 0.00 2.59
1652 2870 2.872245 GCTTCGCCAAATAGTGCATCTA 59.128 45.455 0.00 0.00 0.00 1.98
1653 2871 1.672881 GCTTCGCCAAATAGTGCATCT 59.327 47.619 0.00 0.00 0.00 2.90
1654 2872 2.111041 GCTTCGCCAAATAGTGCATC 57.889 50.000 0.00 0.00 0.00 3.91
1680 2898 2.356313 AAGTGGCTCGAGTGCGTG 60.356 61.111 15.13 0.00 38.98 5.34
1681 2899 2.159819 ATCAAGTGGCTCGAGTGCGT 62.160 55.000 15.13 0.13 38.98 5.24
1682 2900 1.446792 ATCAAGTGGCTCGAGTGCG 60.447 57.895 15.13 0.00 39.35 5.34
1683 2901 1.975363 GCATCAAGTGGCTCGAGTGC 61.975 60.000 15.13 9.41 0.00 4.40
1684 2902 1.690283 CGCATCAAGTGGCTCGAGTG 61.690 60.000 15.13 3.83 0.00 3.51
1685 2903 1.446792 CGCATCAAGTGGCTCGAGT 60.447 57.895 15.13 0.00 0.00 4.18
1686 2904 2.169789 CCGCATCAAGTGGCTCGAG 61.170 63.158 8.45 8.45 41.83 4.04
1687 2905 2.125552 CCGCATCAAGTGGCTCGA 60.126 61.111 0.00 0.00 41.83 4.04
1693 2911 0.529337 AGATCGAGCCGCATCAAGTG 60.529 55.000 0.00 0.00 0.00 3.16
1694 2912 0.249238 GAGATCGAGCCGCATCAAGT 60.249 55.000 0.00 0.00 0.00 3.16
1695 2913 0.943359 GGAGATCGAGCCGCATCAAG 60.943 60.000 0.00 0.00 0.00 3.02
1696 2914 1.068083 GGAGATCGAGCCGCATCAA 59.932 57.895 0.00 0.00 0.00 2.57
1697 2915 2.730733 GGAGATCGAGCCGCATCA 59.269 61.111 0.00 0.00 0.00 3.07
1698 2916 2.048690 GGGAGATCGAGCCGCATC 60.049 66.667 0.00 0.00 0.00 3.91
1699 2917 3.983494 CGGGAGATCGAGCCGCAT 61.983 66.667 0.00 0.00 0.00 4.73
1701 2919 4.632458 GTCGGGAGATCGAGCCGC 62.632 72.222 0.00 0.00 43.27 6.53
1702 2920 2.669808 CTTGTCGGGAGATCGAGCCG 62.670 65.000 0.00 0.00 43.27 5.52
1703 2921 1.066587 CTTGTCGGGAGATCGAGCC 59.933 63.158 0.00 0.00 43.27 4.70
1704 2922 0.526524 CACTTGTCGGGAGATCGAGC 60.527 60.000 0.00 0.00 43.27 5.03
1705 2923 0.526524 GCACTTGTCGGGAGATCGAG 60.527 60.000 0.00 0.00 43.27 4.04
1706 2924 1.248101 TGCACTTGTCGGGAGATCGA 61.248 55.000 0.00 0.00 43.27 3.59
1707 2925 0.803768 CTGCACTTGTCGGGAGATCG 60.804 60.000 0.00 0.00 43.27 3.69
1708 2926 1.086634 GCTGCACTTGTCGGGAGATC 61.087 60.000 0.00 0.00 43.27 2.75
1709 2927 1.078848 GCTGCACTTGTCGGGAGAT 60.079 57.895 0.00 0.00 43.27 2.75
1710 2928 2.210013 AGCTGCACTTGTCGGGAGA 61.210 57.895 1.02 0.00 0.00 3.71
1711 2929 2.031516 CAGCTGCACTTGTCGGGAG 61.032 63.158 0.00 0.00 0.00 4.30
1712 2930 2.031012 CAGCTGCACTTGTCGGGA 59.969 61.111 0.00 0.00 0.00 5.14
1713 2931 3.052082 CCAGCTGCACTTGTCGGG 61.052 66.667 8.66 0.00 0.00 5.14
1714 2932 2.281070 ACCAGCTGCACTTGTCGG 60.281 61.111 8.66 0.00 0.00 4.79
1715 2933 1.889105 ACACCAGCTGCACTTGTCG 60.889 57.895 8.66 0.00 0.00 4.35
1716 2934 0.815213 TCACACCAGCTGCACTTGTC 60.815 55.000 8.66 0.00 0.00 3.18
1717 2935 1.097547 GTCACACCAGCTGCACTTGT 61.098 55.000 8.66 5.45 0.00 3.16
1718 2936 1.650912 GTCACACCAGCTGCACTTG 59.349 57.895 8.66 4.77 0.00 3.16
1719 2937 1.889105 CGTCACACCAGCTGCACTT 60.889 57.895 8.66 0.00 0.00 3.16
1720 2938 2.280389 CGTCACACCAGCTGCACT 60.280 61.111 8.66 0.00 0.00 4.40
1721 2939 4.017877 GCGTCACACCAGCTGCAC 62.018 66.667 8.66 0.00 0.00 4.57
1722 2940 3.830464 ATGCGTCACACCAGCTGCA 62.830 57.895 8.66 0.00 36.69 4.41
1723 2941 3.052082 ATGCGTCACACCAGCTGC 61.052 61.111 8.66 0.00 0.00 5.25
1724 2942 2.683859 CCATGCGTCACACCAGCTG 61.684 63.158 6.78 6.78 0.00 4.24
1725 2943 2.359107 CCATGCGTCACACCAGCT 60.359 61.111 0.00 0.00 0.00 4.24
1726 2944 3.434319 CCCATGCGTCACACCAGC 61.434 66.667 0.00 0.00 0.00 4.85
1727 2945 2.034879 GTCCCATGCGTCACACCAG 61.035 63.158 0.00 0.00 0.00 4.00
1728 2946 1.188871 TAGTCCCATGCGTCACACCA 61.189 55.000 0.00 0.00 0.00 4.17
1729 2947 0.178068 ATAGTCCCATGCGTCACACC 59.822 55.000 0.00 0.00 0.00 4.16
1730 2948 2.024176 AATAGTCCCATGCGTCACAC 57.976 50.000 0.00 0.00 0.00 3.82
1731 2949 3.055747 TGTTAATAGTCCCATGCGTCACA 60.056 43.478 0.00 0.00 0.00 3.58
1732 2950 3.308866 GTGTTAATAGTCCCATGCGTCAC 59.691 47.826 0.00 0.00 0.00 3.67
1733 2951 3.055747 TGTGTTAATAGTCCCATGCGTCA 60.056 43.478 0.00 0.00 0.00 4.35
1734 2952 3.527533 TGTGTTAATAGTCCCATGCGTC 58.472 45.455 0.00 0.00 0.00 5.19
1735 2953 3.196901 TCTGTGTTAATAGTCCCATGCGT 59.803 43.478 0.00 0.00 0.00 5.24
1736 2954 3.792401 TCTGTGTTAATAGTCCCATGCG 58.208 45.455 0.00 0.00 0.00 4.73
1737 2955 5.368145 TCATCTGTGTTAATAGTCCCATGC 58.632 41.667 0.00 0.00 0.00 4.06
1738 2956 6.429078 CCATCATCTGTGTTAATAGTCCCATG 59.571 42.308 0.00 0.00 0.00 3.66
1739 2957 6.101734 ACCATCATCTGTGTTAATAGTCCCAT 59.898 38.462 0.00 0.00 0.00 4.00
1740 2958 5.428457 ACCATCATCTGTGTTAATAGTCCCA 59.572 40.000 0.00 0.00 0.00 4.37
1741 2959 5.930135 ACCATCATCTGTGTTAATAGTCCC 58.070 41.667 0.00 0.00 0.00 4.46
1742 2960 6.647067 GCTACCATCATCTGTGTTAATAGTCC 59.353 42.308 0.00 0.00 0.00 3.85
1743 2961 7.210174 TGCTACCATCATCTGTGTTAATAGTC 58.790 38.462 0.00 0.00 0.00 2.59
1744 2962 7.124573 TGCTACCATCATCTGTGTTAATAGT 57.875 36.000 0.00 0.00 0.00 2.12
1745 2963 7.658982 ACATGCTACCATCATCTGTGTTAATAG 59.341 37.037 0.00 0.00 0.00 1.73
1746 2964 7.442062 CACATGCTACCATCATCTGTGTTAATA 59.558 37.037 0.00 0.00 0.00 0.98
1747 2965 6.261603 CACATGCTACCATCATCTGTGTTAAT 59.738 38.462 0.00 0.00 0.00 1.40
1748 2966 5.585844 CACATGCTACCATCATCTGTGTTAA 59.414 40.000 0.00 0.00 0.00 2.01
1749 2967 5.118286 CACATGCTACCATCATCTGTGTTA 58.882 41.667 0.00 0.00 0.00 2.41
1750 2968 3.943381 CACATGCTACCATCATCTGTGTT 59.057 43.478 0.00 0.00 0.00 3.32
1751 2969 3.538591 CACATGCTACCATCATCTGTGT 58.461 45.455 0.00 0.00 0.00 3.72
1752 2970 2.876550 CCACATGCTACCATCATCTGTG 59.123 50.000 0.00 0.00 0.00 3.66
1753 2971 2.158711 CCCACATGCTACCATCATCTGT 60.159 50.000 0.00 0.00 0.00 3.41
1754 2972 2.501261 CCCACATGCTACCATCATCTG 58.499 52.381 0.00 0.00 0.00 2.90
1755 2973 1.422781 CCCCACATGCTACCATCATCT 59.577 52.381 0.00 0.00 0.00 2.90
1756 2974 1.421268 TCCCCACATGCTACCATCATC 59.579 52.381 0.00 0.00 0.00 2.92
1757 2975 1.143684 GTCCCCACATGCTACCATCAT 59.856 52.381 0.00 0.00 0.00 2.45
1758 2976 0.546122 GTCCCCACATGCTACCATCA 59.454 55.000 0.00 0.00 0.00 3.07
1759 2977 0.179018 GGTCCCCACATGCTACCATC 60.179 60.000 0.00 0.00 0.00 3.51
1760 2978 0.918799 TGGTCCCCACATGCTACCAT 60.919 55.000 0.00 0.00 35.34 3.55
1761 2979 0.918799 ATGGTCCCCACATGCTACCA 60.919 55.000 7.43 7.43 43.93 3.25
1762 2980 0.466189 CATGGTCCCCACATGCTACC 60.466 60.000 0.00 0.00 39.23 3.18
1763 2981 3.100545 CATGGTCCCCACATGCTAC 57.899 57.895 0.00 0.00 39.23 3.58
1767 2985 2.442643 GGGCATGGTCCCCACATG 60.443 66.667 2.20 0.00 46.45 3.21
1774 2992 4.408821 TGCACGAGGGCATGGTCC 62.409 66.667 0.00 0.00 39.25 4.46
1781 2999 2.009042 GCTATCCATATGCACGAGGGC 61.009 57.143 0.00 0.00 0.00 5.19
1782 3000 1.737029 CGCTATCCATATGCACGAGGG 60.737 57.143 0.00 0.00 0.00 4.30
1783 3001 1.633561 CGCTATCCATATGCACGAGG 58.366 55.000 0.00 0.00 0.00 4.63
1784 3002 1.633561 CCGCTATCCATATGCACGAG 58.366 55.000 0.00 0.00 0.00 4.18
1785 3003 0.246360 CCCGCTATCCATATGCACGA 59.754 55.000 0.00 0.00 0.00 4.35
1786 3004 1.361668 GCCCGCTATCCATATGCACG 61.362 60.000 0.00 0.00 0.00 5.34
1787 3005 1.361668 CGCCCGCTATCCATATGCAC 61.362 60.000 0.00 0.00 0.00 4.57
1788 3006 1.079197 CGCCCGCTATCCATATGCA 60.079 57.895 0.00 0.00 0.00 3.96
1789 3007 2.464459 GCGCCCGCTATCCATATGC 61.464 63.158 5.27 0.00 38.26 3.14
1790 3008 1.815421 GGCGCCCGCTATCCATATG 60.815 63.158 18.11 0.00 41.60 1.78
1791 3009 0.686441 TAGGCGCCCGCTATCCATAT 60.686 55.000 26.15 1.43 41.60 1.78
1792 3010 0.686441 ATAGGCGCCCGCTATCCATA 60.686 55.000 26.15 5.65 41.60 2.74
1793 3011 1.553690 AATAGGCGCCCGCTATCCAT 61.554 55.000 26.15 2.97 41.60 3.41
1794 3012 2.167398 GAATAGGCGCCCGCTATCCA 62.167 60.000 26.15 0.00 41.60 3.41
1795 3013 1.448013 GAATAGGCGCCCGCTATCC 60.448 63.158 26.15 0.00 41.60 2.59
1796 3014 1.014564 GTGAATAGGCGCCCGCTATC 61.015 60.000 26.15 15.20 41.60 2.08
1797 3015 1.004918 GTGAATAGGCGCCCGCTAT 60.005 57.895 26.15 12.27 41.60 2.97
1798 3016 1.754380 ATGTGAATAGGCGCCCGCTA 61.754 55.000 26.15 10.04 41.60 4.26
1799 3017 3.106986 ATGTGAATAGGCGCCCGCT 62.107 57.895 26.15 7.52 41.60 5.52
1800 3018 2.591715 ATGTGAATAGGCGCCCGC 60.592 61.111 26.15 15.22 41.06 6.13
1801 3019 2.896801 GCATGTGAATAGGCGCCCG 61.897 63.158 26.15 1.27 0.00 6.13
1802 3020 1.174712 ATGCATGTGAATAGGCGCCC 61.175 55.000 26.15 8.39 0.00 6.13
1803 3021 0.039798 CATGCATGTGAATAGGCGCC 60.040 55.000 21.89 21.89 0.00 6.53
1804 3022 0.664761 ACATGCATGTGAATAGGCGC 59.335 50.000 30.92 0.00 40.03 6.53
1805 3023 3.425577 AAACATGCATGTGAATAGGCG 57.574 42.857 31.98 2.26 41.61 5.52
1806 3024 4.563976 GTCAAAACATGCATGTGAATAGGC 59.436 41.667 31.98 17.69 41.61 3.93
1807 3025 4.794762 CGTCAAAACATGCATGTGAATAGG 59.205 41.667 31.98 18.63 41.61 2.57
1808 3026 5.393124 ACGTCAAAACATGCATGTGAATAG 58.607 37.500 31.98 22.07 41.61 1.73
1809 3027 5.369685 ACGTCAAAACATGCATGTGAATA 57.630 34.783 31.98 15.82 41.61 1.75
1810 3028 4.241590 ACGTCAAAACATGCATGTGAAT 57.758 36.364 31.98 18.52 41.61 2.57
1811 3029 3.706802 ACGTCAAAACATGCATGTGAA 57.293 38.095 31.98 15.12 41.61 3.18
1812 3030 3.370276 CAACGTCAAAACATGCATGTGA 58.630 40.909 31.98 21.72 41.61 3.58
1813 3031 2.097299 GCAACGTCAAAACATGCATGTG 60.097 45.455 31.98 19.79 41.61 3.21
1814 3032 2.126467 GCAACGTCAAAACATGCATGT 58.874 42.857 26.61 26.61 44.20 3.21
1815 3033 2.396601 AGCAACGTCAAAACATGCATG 58.603 42.857 25.09 25.09 39.25 4.06
1816 3034 2.664916 GAGCAACGTCAAAACATGCAT 58.335 42.857 8.67 0.00 39.25 3.96
1817 3035 1.596709 CGAGCAACGTCAAAACATGCA 60.597 47.619 8.67 0.00 39.25 3.96
1818 3036 1.044725 CGAGCAACGTCAAAACATGC 58.955 50.000 0.00 0.00 37.86 4.06
1830 3048 4.136517 TGAAACGGAATAAACGAGCAAC 57.863 40.909 0.00 0.00 34.93 4.17
1831 3049 3.810941 ACTGAAACGGAATAAACGAGCAA 59.189 39.130 0.00 0.00 34.93 3.91
1832 3050 3.395639 ACTGAAACGGAATAAACGAGCA 58.604 40.909 0.00 0.00 34.93 4.26
1833 3051 4.400036 AACTGAAACGGAATAAACGAGC 57.600 40.909 0.00 0.00 34.93 5.03
1854 3072 7.840342 TCAAATGCTGTAGCTTTTTGAAAAA 57.160 28.000 21.80 2.83 43.10 1.94
1855 3073 7.840342 TTCAAATGCTGTAGCTTTTTGAAAA 57.160 28.000 26.85 16.43 46.94 2.29
1858 3076 5.288804 GGTTCAAATGCTGTAGCTTTTTGA 58.711 37.500 20.94 20.94 43.10 2.69
1859 3077 4.148696 CGGTTCAAATGCTGTAGCTTTTTG 59.851 41.667 18.38 18.38 43.10 2.44
1860 3078 4.037446 TCGGTTCAAATGCTGTAGCTTTTT 59.963 37.500 13.14 7.12 43.10 1.94
1861 3079 3.568007 TCGGTTCAAATGCTGTAGCTTTT 59.432 39.130 10.77 10.77 45.41 2.27
1862 3080 3.146066 TCGGTTCAAATGCTGTAGCTTT 58.854 40.909 5.38 2.39 42.66 3.51
1863 3081 2.744202 CTCGGTTCAAATGCTGTAGCTT 59.256 45.455 5.38 0.00 42.66 3.74
1864 3082 2.289694 ACTCGGTTCAAATGCTGTAGCT 60.290 45.455 5.38 0.00 42.66 3.32
1865 3083 2.076863 ACTCGGTTCAAATGCTGTAGC 58.923 47.619 0.00 0.00 42.50 3.58
1866 3084 3.067106 ACACTCGGTTCAAATGCTGTAG 58.933 45.455 0.00 0.00 0.00 2.74
1867 3085 3.064207 GACACTCGGTTCAAATGCTGTA 58.936 45.455 0.00 0.00 0.00 2.74
1868 3086 1.873591 GACACTCGGTTCAAATGCTGT 59.126 47.619 0.00 0.00 0.00 4.40
1869 3087 1.872952 TGACACTCGGTTCAAATGCTG 59.127 47.619 0.00 0.00 0.00 4.41
1870 3088 2.146342 CTGACACTCGGTTCAAATGCT 58.854 47.619 0.00 0.00 0.00 3.79
1871 3089 2.143122 TCTGACACTCGGTTCAAATGC 58.857 47.619 0.00 0.00 0.00 3.56
1872 3090 3.809832 AGTTCTGACACTCGGTTCAAATG 59.190 43.478 0.00 0.00 0.00 2.32
1873 3091 4.073293 AGTTCTGACACTCGGTTCAAAT 57.927 40.909 0.00 0.00 0.00 2.32
1874 3092 3.536956 AGTTCTGACACTCGGTTCAAA 57.463 42.857 0.00 0.00 0.00 2.69
1875 3093 4.340097 TCTTAGTTCTGACACTCGGTTCAA 59.660 41.667 0.00 0.00 0.00 2.69
1876 3094 3.887110 TCTTAGTTCTGACACTCGGTTCA 59.113 43.478 0.00 0.00 0.00 3.18
1877 3095 4.500603 TCTTAGTTCTGACACTCGGTTC 57.499 45.455 0.00 0.00 0.00 3.62
1878 3096 4.341520 AGTTCTTAGTTCTGACACTCGGTT 59.658 41.667 0.00 0.00 0.00 4.44
1879 3097 3.890147 AGTTCTTAGTTCTGACACTCGGT 59.110 43.478 0.00 0.00 0.00 4.69
1880 3098 4.506886 AGTTCTTAGTTCTGACACTCGG 57.493 45.455 0.00 0.00 0.00 4.63
1881 3099 8.522178 AAAATAGTTCTTAGTTCTGACACTCG 57.478 34.615 0.00 0.00 0.00 4.18
1882 3100 9.477484 TGAAAATAGTTCTTAGTTCTGACACTC 57.523 33.333 0.00 0.00 0.00 3.51
1883 3101 9.262358 GTGAAAATAGTTCTTAGTTCTGACACT 57.738 33.333 0.00 0.00 0.00 3.55
1884 3102 8.496751 GGTGAAAATAGTTCTTAGTTCTGACAC 58.503 37.037 0.00 0.00 0.00 3.67
1885 3103 7.660208 GGGTGAAAATAGTTCTTAGTTCTGACA 59.340 37.037 0.00 0.00 0.00 3.58
1886 3104 7.878644 AGGGTGAAAATAGTTCTTAGTTCTGAC 59.121 37.037 0.00 0.00 0.00 3.51
1887 3105 7.974504 AGGGTGAAAATAGTTCTTAGTTCTGA 58.025 34.615 0.00 0.00 0.00 3.27
1888 3106 8.507249 CAAGGGTGAAAATAGTTCTTAGTTCTG 58.493 37.037 0.00 0.00 0.00 3.02
1889 3107 7.665974 CCAAGGGTGAAAATAGTTCTTAGTTCT 59.334 37.037 0.00 0.00 0.00 3.01
1890 3108 7.664318 TCCAAGGGTGAAAATAGTTCTTAGTTC 59.336 37.037 0.00 0.00 0.00 3.01
1891 3109 7.523415 TCCAAGGGTGAAAATAGTTCTTAGTT 58.477 34.615 0.00 0.00 0.00 2.24
1892 3110 7.086685 TCCAAGGGTGAAAATAGTTCTTAGT 57.913 36.000 0.00 0.00 0.00 2.24
1893 3111 8.581253 AATCCAAGGGTGAAAATAGTTCTTAG 57.419 34.615 0.00 0.00 0.00 2.18
1894 3112 8.950007 AAATCCAAGGGTGAAAATAGTTCTTA 57.050 30.769 0.00 0.00 0.00 2.10
1895 3113 7.730332 AGAAATCCAAGGGTGAAAATAGTTCTT 59.270 33.333 0.00 0.00 0.00 2.52
1896 3114 7.241628 AGAAATCCAAGGGTGAAAATAGTTCT 58.758 34.615 0.00 0.00 0.00 3.01
1897 3115 7.176690 TGAGAAATCCAAGGGTGAAAATAGTTC 59.823 37.037 0.00 0.00 0.00 3.01
1898 3116 7.010160 TGAGAAATCCAAGGGTGAAAATAGTT 58.990 34.615 0.00 0.00 0.00 2.24
1899 3117 6.552008 TGAGAAATCCAAGGGTGAAAATAGT 58.448 36.000 0.00 0.00 0.00 2.12
1900 3118 7.340232 TCATGAGAAATCCAAGGGTGAAAATAG 59.660 37.037 0.00 0.00 0.00 1.73
1901 3119 7.122650 GTCATGAGAAATCCAAGGGTGAAAATA 59.877 37.037 0.00 0.00 0.00 1.40
1902 3120 6.018469 TCATGAGAAATCCAAGGGTGAAAAT 58.982 36.000 0.00 0.00 0.00 1.82
1903 3121 5.243730 GTCATGAGAAATCCAAGGGTGAAAA 59.756 40.000 0.00 0.00 0.00 2.29
1904 3122 4.766891 GTCATGAGAAATCCAAGGGTGAAA 59.233 41.667 0.00 0.00 0.00 2.69
1905 3123 4.335416 GTCATGAGAAATCCAAGGGTGAA 58.665 43.478 0.00 0.00 0.00 3.18
1906 3124 3.308402 GGTCATGAGAAATCCAAGGGTGA 60.308 47.826 0.00 0.00 0.00 4.02
1907 3125 3.019564 GGTCATGAGAAATCCAAGGGTG 58.980 50.000 0.00 0.00 0.00 4.61
1908 3126 2.649312 TGGTCATGAGAAATCCAAGGGT 59.351 45.455 0.00 0.00 0.00 4.34
1909 3127 3.285484 CTGGTCATGAGAAATCCAAGGG 58.715 50.000 0.00 0.00 0.00 3.95
1910 3128 2.686915 GCTGGTCATGAGAAATCCAAGG 59.313 50.000 0.00 0.00 0.00 3.61
1911 3129 2.686915 GGCTGGTCATGAGAAATCCAAG 59.313 50.000 0.00 0.00 0.00 3.61
1912 3130 2.621407 GGGCTGGTCATGAGAAATCCAA 60.621 50.000 0.00 0.00 0.00 3.53
1913 3131 1.064463 GGGCTGGTCATGAGAAATCCA 60.064 52.381 0.00 0.00 0.00 3.41
1914 3132 1.213926 AGGGCTGGTCATGAGAAATCC 59.786 52.381 0.00 0.00 0.00 3.01
1915 3133 2.725221 AGGGCTGGTCATGAGAAATC 57.275 50.000 0.00 0.00 0.00 2.17
1916 3134 2.309755 TGAAGGGCTGGTCATGAGAAAT 59.690 45.455 0.00 0.00 0.00 2.17
1917 3135 1.704628 TGAAGGGCTGGTCATGAGAAA 59.295 47.619 0.00 0.00 0.00 2.52
1918 3136 1.361204 TGAAGGGCTGGTCATGAGAA 58.639 50.000 0.00 0.00 0.00 2.87
1919 3137 1.280133 CTTGAAGGGCTGGTCATGAGA 59.720 52.381 0.00 0.00 0.00 3.27
1920 3138 1.280133 TCTTGAAGGGCTGGTCATGAG 59.720 52.381 0.00 0.00 0.00 2.90
1921 3139 1.003580 GTCTTGAAGGGCTGGTCATGA 59.996 52.381 0.00 0.00 0.00 3.07
1922 3140 1.004044 AGTCTTGAAGGGCTGGTCATG 59.996 52.381 0.00 0.00 0.00 3.07
1923 3141 1.366319 AGTCTTGAAGGGCTGGTCAT 58.634 50.000 0.00 0.00 0.00 3.06
1924 3142 1.902508 CTAGTCTTGAAGGGCTGGTCA 59.097 52.381 0.00 0.00 0.00 4.02
1925 3143 1.208293 CCTAGTCTTGAAGGGCTGGTC 59.792 57.143 0.00 0.00 0.00 4.02
1926 3144 1.280457 CCTAGTCTTGAAGGGCTGGT 58.720 55.000 0.00 0.00 0.00 4.00
1927 3145 0.543749 CCCTAGTCTTGAAGGGCTGG 59.456 60.000 0.00 0.00 45.91 4.85
1932 3150 1.985895 ACAACCCCCTAGTCTTGAAGG 59.014 52.381 0.00 0.00 0.00 3.46
1933 3151 3.790089 AACAACCCCCTAGTCTTGAAG 57.210 47.619 0.00 0.00 0.00 3.02
1934 3152 3.435890 CCAAACAACCCCCTAGTCTTGAA 60.436 47.826 0.00 0.00 0.00 2.69
1935 3153 2.107552 CCAAACAACCCCCTAGTCTTGA 59.892 50.000 0.00 0.00 0.00 3.02
1936 3154 2.158519 ACCAAACAACCCCCTAGTCTTG 60.159 50.000 0.00 0.00 0.00 3.02
1937 3155 2.141067 ACCAAACAACCCCCTAGTCTT 58.859 47.619 0.00 0.00 0.00 3.01
1938 3156 1.423921 CACCAAACAACCCCCTAGTCT 59.576 52.381 0.00 0.00 0.00 3.24
1939 3157 1.546998 CCACCAAACAACCCCCTAGTC 60.547 57.143 0.00 0.00 0.00 2.59
1940 3158 0.481128 CCACCAAACAACCCCCTAGT 59.519 55.000 0.00 0.00 0.00 2.57
1941 3159 0.774908 TCCACCAAACAACCCCCTAG 59.225 55.000 0.00 0.00 0.00 3.02
1942 3160 1.076350 CATCCACCAAACAACCCCCTA 59.924 52.381 0.00 0.00 0.00 3.53
1943 3161 0.178935 CATCCACCAAACAACCCCCT 60.179 55.000 0.00 0.00 0.00 4.79
1944 3162 0.471022 ACATCCACCAAACAACCCCC 60.471 55.000 0.00 0.00 0.00 5.40
1945 3163 0.966179 GACATCCACCAAACAACCCC 59.034 55.000 0.00 0.00 0.00 4.95
1946 3164 0.966179 GGACATCCACCAAACAACCC 59.034 55.000 0.00 0.00 35.64 4.11
1947 3165 1.613437 CAGGACATCCACCAAACAACC 59.387 52.381 0.00 0.00 38.89 3.77
1948 3166 1.000274 GCAGGACATCCACCAAACAAC 60.000 52.381 0.00 0.00 38.89 3.32
1949 3167 1.327303 GCAGGACATCCACCAAACAA 58.673 50.000 0.00 0.00 38.89 2.83
1950 3168 0.184692 TGCAGGACATCCACCAAACA 59.815 50.000 0.00 0.00 38.89 2.83
1951 3169 0.598065 GTGCAGGACATCCACCAAAC 59.402 55.000 0.00 0.00 38.89 2.93
1952 3170 0.888736 CGTGCAGGACATCCACCAAA 60.889 55.000 0.00 0.00 38.89 3.28
1953 3171 1.302431 CGTGCAGGACATCCACCAA 60.302 57.895 0.00 0.00 38.89 3.67
1954 3172 2.347114 CGTGCAGGACATCCACCA 59.653 61.111 0.00 0.00 38.89 4.17
1955 3173 3.127533 GCGTGCAGGACATCCACC 61.128 66.667 11.29 0.00 38.89 4.61
1956 3174 2.358615 TGCGTGCAGGACATCCAC 60.359 61.111 11.29 0.00 38.89 4.02
1957 3175 2.046988 CTGCGTGCAGGACATCCA 60.047 61.111 14.00 0.00 40.17 3.41
1958 3176 3.503363 GCTGCGTGCAGGACATCC 61.503 66.667 22.22 1.84 43.77 3.51
1959 3177 3.857854 CGCTGCGTGCAGGACATC 61.858 66.667 22.22 5.30 43.77 3.06
1981 3199 2.963854 CCGGATAGCTGCGTGCAG 60.964 66.667 17.29 17.29 45.94 4.41
2006 3224 2.476051 GCATCACCGTGCAACTCG 59.524 61.111 0.00 0.00 44.43 4.18
2007 3225 2.317609 ACGCATCACCGTGCAACTC 61.318 57.895 0.00 0.00 45.30 3.01
2008 3226 2.280797 ACGCATCACCGTGCAACT 60.281 55.556 0.00 0.00 45.30 3.16
2014 3232 1.891919 AAACTGCACGCATCACCGT 60.892 52.632 0.00 0.00 43.11 4.83
2015 3233 1.440850 CAAACTGCACGCATCACCG 60.441 57.895 0.00 0.00 0.00 4.94
2016 3234 0.523072 ATCAAACTGCACGCATCACC 59.477 50.000 0.00 0.00 0.00 4.02
2017 3235 2.336554 AATCAAACTGCACGCATCAC 57.663 45.000 0.00 0.00 0.00 3.06
2018 3236 2.663808 CAAATCAAACTGCACGCATCA 58.336 42.857 0.00 0.00 0.00 3.07
2019 3237 1.387756 GCAAATCAAACTGCACGCATC 59.612 47.619 0.00 0.00 38.48 3.91
2020 3238 1.269673 TGCAAATCAAACTGCACGCAT 60.270 42.857 0.00 0.00 43.44 4.73
2021 3239 0.101939 TGCAAATCAAACTGCACGCA 59.898 45.000 0.00 0.00 43.44 5.24
2022 3240 2.884146 TGCAAATCAAACTGCACGC 58.116 47.368 0.00 0.00 43.44 5.34
2025 3243 3.948196 GCTTTTGCAAATCAAACTGCA 57.052 38.095 13.65 0.00 46.50 4.41
2038 3256 1.055338 CACTGCTTTAGCGCTTTTGC 58.945 50.000 18.68 17.80 45.83 3.68
2039 3257 2.686558 TCACTGCTTTAGCGCTTTTG 57.313 45.000 18.68 7.08 45.83 2.44
2040 3258 3.751175 TGTATCACTGCTTTAGCGCTTTT 59.249 39.130 18.68 0.00 45.83 2.27
2041 3259 3.334691 TGTATCACTGCTTTAGCGCTTT 58.665 40.909 18.68 0.00 45.83 3.51
2042 3260 2.972625 TGTATCACTGCTTTAGCGCTT 58.027 42.857 18.68 0.00 45.83 4.68
2043 3261 2.672961 TGTATCACTGCTTTAGCGCT 57.327 45.000 17.26 17.26 45.83 5.92
2044 3262 4.051922 ACTATGTATCACTGCTTTAGCGC 58.948 43.478 0.00 0.00 45.83 5.92
2045 3263 5.043903 ACACTATGTATCACTGCTTTAGCG 58.956 41.667 0.00 0.00 45.83 4.26
2046 3264 8.594881 ATTACACTATGTATCACTGCTTTAGC 57.405 34.615 0.00 0.00 35.60 3.09
2049 3267 9.534565 CTGTATTACACTATGTATCACTGCTTT 57.465 33.333 0.00 0.00 32.20 3.51
2050 3268 8.914011 TCTGTATTACACTATGTATCACTGCTT 58.086 33.333 0.00 0.00 32.20 3.91
2051 3269 8.465273 TCTGTATTACACTATGTATCACTGCT 57.535 34.615 0.00 0.00 32.20 4.24
2052 3270 8.568794 TCTCTGTATTACACTATGTATCACTGC 58.431 37.037 0.00 0.00 32.20 4.40
2060 3278 9.854668 AGTGTATCTCTCTGTATTACACTATGT 57.145 33.333 11.22 0.00 43.01 2.29
2062 3280 8.788806 GCAGTGTATCTCTCTGTATTACACTAT 58.211 37.037 12.22 0.00 42.98 2.12
2063 3281 7.041984 CGCAGTGTATCTCTCTGTATTACACTA 60.042 40.741 12.22 0.00 42.98 2.74
2064 3282 6.238511 CGCAGTGTATCTCTCTGTATTACACT 60.239 42.308 7.93 7.93 44.88 3.55
2065 3283 5.910166 CGCAGTGTATCTCTCTGTATTACAC 59.090 44.000 0.00 0.00 39.15 2.90
2066 3284 5.589050 ACGCAGTGTATCTCTCTGTATTACA 59.411 40.000 0.00 0.00 42.51 2.41
2067 3285 6.062434 ACGCAGTGTATCTCTCTGTATTAC 57.938 41.667 0.00 0.00 42.51 1.89
2101 3319 4.742201 CACGGACCGAGCCCACTG 62.742 72.222 23.38 1.91 0.00 3.66
2104 3322 4.682334 TACCACGGACCGAGCCCA 62.682 66.667 23.38 0.00 0.00 5.36
2105 3323 4.139234 GTACCACGGACCGAGCCC 62.139 72.222 23.38 0.00 0.00 5.19
2106 3324 2.643232 AAGTACCACGGACCGAGCC 61.643 63.158 23.38 3.34 0.00 4.70
2107 3325 1.445582 CAAGTACCACGGACCGAGC 60.446 63.158 23.38 5.41 0.00 5.03
2108 3326 0.109412 GACAAGTACCACGGACCGAG 60.109 60.000 23.38 13.45 0.00 4.63
2109 3327 0.538057 AGACAAGTACCACGGACCGA 60.538 55.000 23.38 0.00 0.00 4.69
2110 3328 0.388134 CAGACAAGTACCACGGACCG 60.388 60.000 13.61 13.61 0.00 4.79
2111 3329 0.037605 CCAGACAAGTACCACGGACC 60.038 60.000 0.00 0.00 0.00 4.46
2112 3330 0.669625 GCCAGACAAGTACCACGGAC 60.670 60.000 0.00 0.00 0.00 4.79
2113 3331 1.116536 TGCCAGACAAGTACCACGGA 61.117 55.000 0.00 0.00 0.00 4.69
2114 3332 0.949105 GTGCCAGACAAGTACCACGG 60.949 60.000 0.00 0.00 0.00 4.94
2115 3333 1.282248 CGTGCCAGACAAGTACCACG 61.282 60.000 3.32 3.32 39.75 4.94
2116 3334 0.949105 CCGTGCCAGACAAGTACCAC 60.949 60.000 0.00 0.00 0.00 4.16
2117 3335 1.116536 TCCGTGCCAGACAAGTACCA 61.117 55.000 0.00 0.00 0.00 3.25
2118 3336 0.669625 GTCCGTGCCAGACAAGTACC 60.670 60.000 0.00 0.00 34.27 3.34
2119 3337 0.032952 TGTCCGTGCCAGACAAGTAC 59.967 55.000 0.00 0.00 41.17 2.73
2120 3338 0.753867 TTGTCCGTGCCAGACAAGTA 59.246 50.000 8.68 0.00 46.50 2.24
2121 3339 1.524961 TTGTCCGTGCCAGACAAGT 59.475 52.632 8.68 0.00 46.50 3.16
2122 3340 4.454948 TTGTCCGTGCCAGACAAG 57.545 55.556 8.68 0.00 46.50 3.16
2124 3342 1.112916 TCTCTTGTCCGTGCCAGACA 61.113 55.000 0.00 0.00 42.36 3.41
2125 3343 0.667792 GTCTCTTGTCCGTGCCAGAC 60.668 60.000 0.00 0.00 34.72 3.51
2126 3344 1.666011 GTCTCTTGTCCGTGCCAGA 59.334 57.895 0.00 0.00 0.00 3.86
2127 3345 1.734477 CGTCTCTTGTCCGTGCCAG 60.734 63.158 0.00 0.00 0.00 4.85
2128 3346 2.338620 CGTCTCTTGTCCGTGCCA 59.661 61.111 0.00 0.00 0.00 4.92
2129 3347 2.022129 CACGTCTCTTGTCCGTGCC 61.022 63.158 0.00 0.00 44.34 5.01
2130 3348 3.538841 CACGTCTCTTGTCCGTGC 58.461 61.111 0.00 0.00 44.34 5.34
2132 3350 2.338984 GGCACGTCTCTTGTCCGT 59.661 61.111 0.00 0.00 34.71 4.69
2133 3351 2.432628 GGGCACGTCTCTTGTCCG 60.433 66.667 0.00 0.00 0.00 4.79
2134 3352 2.047179 GGGGCACGTCTCTTGTCC 60.047 66.667 0.00 0.00 38.09 4.02
2135 3353 2.432628 CGGGGCACGTCTCTTGTC 60.433 66.667 0.00 0.00 37.93 3.18
2136 3354 4.681978 GCGGGGCACGTCTCTTGT 62.682 66.667 12.27 0.00 46.52 3.16
2152 3370 4.980903 CCACTTTGCACCACGCGC 62.981 66.667 5.73 0.00 46.97 6.86
2153 3371 4.326766 CCCACTTTGCACCACGCG 62.327 66.667 3.53 3.53 46.97 6.01
2154 3372 4.645921 GCCCACTTTGCACCACGC 62.646 66.667 0.00 0.00 42.89 5.34
2155 3373 3.977244 GGCCCACTTTGCACCACG 61.977 66.667 0.00 0.00 0.00 4.94
2156 3374 2.158561 GATGGCCCACTTTGCACCAC 62.159 60.000 0.00 0.00 32.13 4.16
2157 3375 1.907807 GATGGCCCACTTTGCACCA 60.908 57.895 0.00 0.00 34.28 4.17
2158 3376 2.973082 GATGGCCCACTTTGCACC 59.027 61.111 0.00 0.00 0.00 5.01
2159 3377 2.568090 CGATGGCCCACTTTGCAC 59.432 61.111 0.00 0.00 0.00 4.57
2160 3378 2.676121 CCGATGGCCCACTTTGCA 60.676 61.111 0.00 0.00 0.00 4.08
2161 3379 2.212900 GAACCGATGGCCCACTTTGC 62.213 60.000 0.00 0.00 0.00 3.68
2162 3380 0.609131 AGAACCGATGGCCCACTTTG 60.609 55.000 0.00 0.00 0.00 2.77
2163 3381 0.322546 GAGAACCGATGGCCCACTTT 60.323 55.000 0.00 0.00 0.00 2.66
2164 3382 1.201429 AGAGAACCGATGGCCCACTT 61.201 55.000 0.00 0.00 0.00 3.16
2165 3383 1.613630 AGAGAACCGATGGCCCACT 60.614 57.895 0.00 0.00 0.00 4.00
2166 3384 1.450312 CAGAGAACCGATGGCCCAC 60.450 63.158 0.00 0.00 0.00 4.61
2167 3385 2.989639 CAGAGAACCGATGGCCCA 59.010 61.111 0.00 0.00 0.00 5.36
2168 3386 2.514824 GCAGAGAACCGATGGCCC 60.515 66.667 0.00 0.00 0.00 5.80
2169 3387 2.109126 GTGCAGAGAACCGATGGCC 61.109 63.158 0.00 0.00 0.00 5.36
2170 3388 2.456119 CGTGCAGAGAACCGATGGC 61.456 63.158 0.00 0.00 0.00 4.40
2171 3389 1.811266 CCGTGCAGAGAACCGATGG 60.811 63.158 0.00 0.00 0.00 3.51
2172 3390 2.456119 GCCGTGCAGAGAACCGATG 61.456 63.158 0.00 0.00 0.00 3.84
2173 3391 2.125512 GCCGTGCAGAGAACCGAT 60.126 61.111 0.00 0.00 0.00 4.18
2174 3392 3.303135 AGCCGTGCAGAGAACCGA 61.303 61.111 0.00 0.00 0.00 4.69
2175 3393 3.114616 CAGCCGTGCAGAGAACCG 61.115 66.667 0.00 0.00 0.00 4.44
2176 3394 2.743928 CCAGCCGTGCAGAGAACC 60.744 66.667 0.00 0.00 0.00 3.62
2177 3395 3.426568 GCCAGCCGTGCAGAGAAC 61.427 66.667 0.00 0.00 0.00 3.01
2178 3396 4.704833 GGCCAGCCGTGCAGAGAA 62.705 66.667 0.00 0.00 0.00 2.87
2192 3410 4.452733 CTTCAGACGACCGGGGCC 62.453 72.222 6.32 0.00 0.00 5.80
2194 3412 1.392710 ATAGCTTCAGACGACCGGGG 61.393 60.000 6.32 0.00 0.00 5.73
2195 3413 0.249073 CATAGCTTCAGACGACCGGG 60.249 60.000 6.32 0.00 0.00 5.73
2196 3414 0.456221 ACATAGCTTCAGACGACCGG 59.544 55.000 0.00 0.00 0.00 5.28
2197 3415 3.300857 CATACATAGCTTCAGACGACCG 58.699 50.000 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.