Multiple sequence alignment - TraesCS3B01G344800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G344800 chr3B 100.000 3740 0 0 1 3740 554648413 554644674 0.000000e+00 6907.0
1 TraesCS3B01G344800 chr3B 100.000 69 0 0 4075 4143 554644339 554644271 1.210000e-25 128.0
2 TraesCS3B01G344800 chr3D 93.288 1892 77 22 1337 3206 424652946 424651083 0.000000e+00 2745.0
3 TraesCS3B01G344800 chr3D 87.078 681 55 18 333 1006 424653961 424653307 0.000000e+00 739.0
4 TraesCS3B01G344800 chr3D 90.494 263 11 4 3207 3456 424651047 424650786 6.640000e-88 335.0
5 TraesCS3B01G344800 chr3A 91.913 1892 104 25 1334 3206 564348046 564349907 0.000000e+00 2601.0
6 TraesCS3B01G344800 chr3A 89.755 654 36 12 353 1006 564347054 564347676 0.000000e+00 808.0
7 TraesCS3B01G344800 chr3A 93.651 252 7 3 3207 3450 564349939 564350189 6.540000e-98 368.0
8 TraesCS3B01G344800 chr3A 84.545 220 31 3 2 219 564346781 564346999 9.020000e-52 215.0
9 TraesCS3B01G344800 chr1B 92.083 240 19 0 3491 3730 413971792 413972031 5.130000e-89 339.0
10 TraesCS3B01G344800 chr1B 80.315 254 43 7 2760 3008 566608173 566608424 7.070000e-43 185.0
11 TraesCS3B01G344800 chr4B 88.750 240 27 0 3491 3730 394356516 394356755 1.130000e-75 294.0
12 TraesCS3B01G344800 chr1A 87.603 242 26 3 3493 3730 278241427 278241186 1.130000e-70 278.0
13 TraesCS3B01G344800 chr5D 87.190 242 27 3 3492 3730 114904876 114905116 5.280000e-69 272.0
14 TraesCS3B01G344800 chr5D 86.957 92 12 0 3639 3730 316807101 316807192 2.040000e-18 104.0
15 TraesCS3B01G344800 chr1D 82.677 254 37 6 2760 3008 419469710 419469961 6.970000e-53 219.0
16 TraesCS3B01G344800 chr4D 84.524 84 11 2 3647 3730 177467741 177467822 9.550000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G344800 chr3B 554644271 554648413 4142 True 3517.5 6907 100.000000 1 4143 2 chr3B.!!$R1 4142
1 TraesCS3B01G344800 chr3D 424650786 424653961 3175 True 1273.0 2745 90.286667 333 3456 3 chr3D.!!$R1 3123
2 TraesCS3B01G344800 chr3A 564346781 564350189 3408 False 998.0 2601 89.966000 2 3450 4 chr3A.!!$F1 3448

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
759 778 0.037447 GTTGCTTTCCCTCCAGCTCT 59.963 55.0 0.00 0.0 36.92 4.09 F
2186 2331 0.036022 GCACCTTCTTCTCCAGCTGT 59.964 55.0 13.81 0.0 0.00 4.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2681 2835 0.674895 ATTGGTCAAGTCGGCTCTGC 60.675 55.0 0.00 0.0 0.00 4.26 R
3463 3676 0.111446 TCGCAATTGGGGAAGTGGAA 59.889 50.0 21.01 0.0 35.23 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 6.523546 GCATTTTAAAGAAGAGTAGCGGTTTC 59.476 38.462 0.00 0.00 0.00 2.78
27 28 8.932791 CATTTTAAAGAAGAGTAGCGGTTTCTA 58.067 33.333 0.00 0.00 30.19 2.10
40 41 2.875933 CGGTTTCTAGGAGCAACAAACA 59.124 45.455 0.00 0.00 0.00 2.83
45 46 2.289547 TCTAGGAGCAACAAACAAACGC 59.710 45.455 0.00 0.00 0.00 4.84
50 51 1.393196 AGCAACAAACAAACGCTTTGC 59.607 42.857 9.44 0.00 44.39 3.68
69 71 5.375417 TTGCTGATCTTGTTAATGTGGTG 57.625 39.130 0.00 0.00 0.00 4.17
70 72 4.397420 TGCTGATCTTGTTAATGTGGTGT 58.603 39.130 0.00 0.00 0.00 4.16
72 74 5.411361 TGCTGATCTTGTTAATGTGGTGTAC 59.589 40.000 0.00 0.00 0.00 2.90
74 76 6.149474 GCTGATCTTGTTAATGTGGTGTACTT 59.851 38.462 0.00 0.00 0.00 2.24
85 87 7.792374 AATGTGGTGTACTTATAGATTGCAG 57.208 36.000 0.00 0.00 0.00 4.41
86 88 6.294361 TGTGGTGTACTTATAGATTGCAGT 57.706 37.500 0.00 0.00 0.00 4.40
92 94 8.512138 GGTGTACTTATAGATTGCAGTTGTTTT 58.488 33.333 0.00 0.00 0.00 2.43
121 123 4.823790 TGCTTTTAAGTCGAAAGGAACC 57.176 40.909 0.00 0.00 35.24 3.62
124 126 1.799544 TTAAGTCGAAAGGAACCGCC 58.200 50.000 0.00 0.00 0.00 6.13
136 138 3.161866 AGGAACCGCCATTGTTTAATGT 58.838 40.909 0.00 0.00 41.68 2.71
138 140 4.398044 AGGAACCGCCATTGTTTAATGTAG 59.602 41.667 0.00 0.00 41.68 2.74
141 143 2.425312 CCGCCATTGTTTAATGTAGCCA 59.575 45.455 0.00 0.00 41.68 4.75
143 145 3.857093 CGCCATTGTTTAATGTAGCCAAC 59.143 43.478 0.00 0.00 41.68 3.77
153 155 2.489938 TGTAGCCAACATCCAACTCC 57.510 50.000 0.00 0.00 31.43 3.85
154 156 1.702401 TGTAGCCAACATCCAACTCCA 59.298 47.619 0.00 0.00 31.43 3.86
162 164 1.142060 ACATCCAACTCCACAACGGAA 59.858 47.619 0.00 0.00 45.75 4.30
163 165 1.535462 CATCCAACTCCACAACGGAAC 59.465 52.381 0.00 0.00 45.75 3.62
197 199 3.482156 AATCCATGAATCTCGGTGAGG 57.518 47.619 0.00 0.00 0.00 3.86
212 214 2.622436 GTGAGGTCATAGTGAAGTGCC 58.378 52.381 0.00 0.00 0.00 5.01
213 215 1.555075 TGAGGTCATAGTGAAGTGCCC 59.445 52.381 0.00 0.00 0.00 5.36
214 216 0.912486 AGGTCATAGTGAAGTGCCCC 59.088 55.000 0.00 0.00 0.00 5.80
215 217 0.107165 GGTCATAGTGAAGTGCCCCC 60.107 60.000 0.00 0.00 0.00 5.40
216 218 0.462047 GTCATAGTGAAGTGCCCCCG 60.462 60.000 0.00 0.00 0.00 5.73
217 219 1.819632 CATAGTGAAGTGCCCCCGC 60.820 63.158 0.00 0.00 0.00 6.13
218 220 2.297895 ATAGTGAAGTGCCCCCGCA 61.298 57.895 0.00 0.00 44.78 5.69
263 265 8.660373 GGAATATGAGTACTGAGAACAAAACAG 58.340 37.037 0.00 0.00 37.62 3.16
264 266 9.209175 GAATATGAGTACTGAGAACAAAACAGT 57.791 33.333 0.00 0.00 45.06 3.55
265 267 6.851222 ATGAGTACTGAGAACAAAACAGTG 57.149 37.500 0.00 0.00 43.33 3.66
267 269 6.170506 TGAGTACTGAGAACAAAACAGTGTT 58.829 36.000 0.00 1.64 44.38 3.32
270 272 5.296813 ACTGAGAACAAAACAGTGTTGAC 57.703 39.130 9.79 4.22 41.78 3.18
271 273 4.142902 ACTGAGAACAAAACAGTGTTGACG 60.143 41.667 9.79 3.73 41.78 4.35
273 275 1.837747 GAACAAAACAGTGTTGACGCG 59.162 47.619 9.79 3.53 41.78 6.01
275 277 0.522286 CAAAACAGTGTTGACGCGCA 60.522 50.000 9.79 1.71 0.00 6.09
276 278 0.522495 AAAACAGTGTTGACGCGCAC 60.522 50.000 9.79 6.20 35.98 5.34
277 279 1.640210 AAACAGTGTTGACGCGCACA 61.640 50.000 9.79 3.73 38.02 4.57
279 281 1.061729 CAGTGTTGACGCGCACAAA 59.938 52.632 18.11 8.46 38.02 2.83
281 283 1.061887 GTGTTGACGCGCACAAACT 59.938 52.632 18.11 0.00 35.81 2.66
282 284 0.923911 GTGTTGACGCGCACAAACTC 60.924 55.000 18.11 9.65 35.81 3.01
283 285 1.368850 GTTGACGCGCACAAACTCC 60.369 57.895 18.11 5.38 0.00 3.85
285 287 2.042520 TTGACGCGCACAAACTCCAC 62.043 55.000 5.73 0.00 0.00 4.02
286 288 3.236618 GACGCGCACAAACTCCACC 62.237 63.158 5.73 0.00 0.00 4.61
287 289 4.368808 CGCGCACAAACTCCACCG 62.369 66.667 8.75 0.00 0.00 4.94
288 290 2.970324 GCGCACAAACTCCACCGA 60.970 61.111 0.30 0.00 0.00 4.69
289 291 2.325082 GCGCACAAACTCCACCGAT 61.325 57.895 0.30 0.00 0.00 4.18
290 292 1.017177 GCGCACAAACTCCACCGATA 61.017 55.000 0.30 0.00 0.00 2.92
291 293 0.719465 CGCACAAACTCCACCGATAC 59.281 55.000 0.00 0.00 0.00 2.24
292 294 1.803334 GCACAAACTCCACCGATACA 58.197 50.000 0.00 0.00 0.00 2.29
293 295 1.463444 GCACAAACTCCACCGATACAC 59.537 52.381 0.00 0.00 0.00 2.90
294 296 1.724623 CACAAACTCCACCGATACACG 59.275 52.381 0.00 0.00 42.18 4.49
295 297 1.614903 ACAAACTCCACCGATACACGA 59.385 47.619 0.00 0.00 45.77 4.35
296 298 2.259618 CAAACTCCACCGATACACGAG 58.740 52.381 0.00 0.00 45.77 4.18
297 299 1.830279 AACTCCACCGATACACGAGA 58.170 50.000 0.00 0.00 45.77 4.04
298 300 1.093159 ACTCCACCGATACACGAGAC 58.907 55.000 0.00 0.00 45.77 3.36
299 301 1.092348 CTCCACCGATACACGAGACA 58.908 55.000 0.00 0.00 45.77 3.41
300 302 1.064208 CTCCACCGATACACGAGACAG 59.936 57.143 0.00 0.00 45.77 3.51
301 303 1.092348 CCACCGATACACGAGACAGA 58.908 55.000 0.00 0.00 45.77 3.41
302 304 1.202154 CCACCGATACACGAGACAGAC 60.202 57.143 0.00 0.00 45.77 3.51
303 305 1.738350 CACCGATACACGAGACAGACT 59.262 52.381 0.00 0.00 45.77 3.24
304 306 2.934553 CACCGATACACGAGACAGACTA 59.065 50.000 0.00 0.00 45.77 2.59
305 307 2.935201 ACCGATACACGAGACAGACTAC 59.065 50.000 0.00 0.00 45.77 2.73
306 308 3.196463 CCGATACACGAGACAGACTACT 58.804 50.000 0.00 0.00 45.77 2.57
307 309 4.142071 ACCGATACACGAGACAGACTACTA 60.142 45.833 0.00 0.00 45.77 1.82
308 310 4.208873 CCGATACACGAGACAGACTACTAC 59.791 50.000 0.00 0.00 45.77 2.73
309 311 4.085670 CGATACACGAGACAGACTACTACG 60.086 50.000 0.00 0.00 45.77 3.51
310 312 2.344950 ACACGAGACAGACTACTACGG 58.655 52.381 0.00 0.00 0.00 4.02
311 313 1.664659 CACGAGACAGACTACTACGGG 59.335 57.143 0.00 0.00 0.00 5.28
312 314 1.552337 ACGAGACAGACTACTACGGGA 59.448 52.381 0.00 0.00 0.00 5.14
313 315 2.027745 ACGAGACAGACTACTACGGGAA 60.028 50.000 0.00 0.00 0.00 3.97
314 316 2.351111 CGAGACAGACTACTACGGGAAC 59.649 54.545 0.00 0.00 0.00 3.62
315 317 3.608796 GAGACAGACTACTACGGGAACT 58.391 50.000 0.00 0.00 0.00 3.01
316 318 3.608796 AGACAGACTACTACGGGAACTC 58.391 50.000 0.00 0.00 0.00 3.01
317 319 2.351111 GACAGACTACTACGGGAACTCG 59.649 54.545 0.00 0.00 0.00 4.18
318 320 2.289945 ACAGACTACTACGGGAACTCGT 60.290 50.000 4.87 4.87 45.88 4.18
319 321 2.351111 CAGACTACTACGGGAACTCGTC 59.649 54.545 2.22 0.00 42.82 4.20
320 322 2.027745 AGACTACTACGGGAACTCGTCA 60.028 50.000 2.22 0.00 42.82 4.35
321 323 2.941720 GACTACTACGGGAACTCGTCAT 59.058 50.000 2.22 0.00 42.82 3.06
322 324 2.681848 ACTACTACGGGAACTCGTCATG 59.318 50.000 2.22 0.00 42.82 3.07
323 325 1.542492 ACTACGGGAACTCGTCATGT 58.458 50.000 2.22 0.00 42.82 3.21
324 326 1.471684 ACTACGGGAACTCGTCATGTC 59.528 52.381 2.22 0.00 42.82 3.06
325 327 0.813184 TACGGGAACTCGTCATGTCC 59.187 55.000 2.22 0.00 42.82 4.02
326 328 0.898789 ACGGGAACTCGTCATGTCCT 60.899 55.000 0.00 0.00 39.34 3.85
327 329 0.246635 CGGGAACTCGTCATGTCCTT 59.753 55.000 0.00 0.00 0.00 3.36
328 330 1.736032 CGGGAACTCGTCATGTCCTTC 60.736 57.143 0.00 0.00 0.00 3.46
329 331 1.405661 GGGAACTCGTCATGTCCTTCC 60.406 57.143 0.00 0.00 0.00 3.46
330 332 1.405661 GGAACTCGTCATGTCCTTCCC 60.406 57.143 0.00 0.00 0.00 3.97
331 333 1.550976 GAACTCGTCATGTCCTTCCCT 59.449 52.381 0.00 0.00 0.00 4.20
345 347 5.119694 GTCCTTCCCTAGTTGAATTAGCTG 58.880 45.833 0.00 0.00 0.00 4.24
402 405 2.106332 GGACGGCCGACACATAGG 59.894 66.667 35.90 0.00 0.00 2.57
422 425 3.007074 AGGGACGAGGTTTTTCTTCTCTC 59.993 47.826 0.00 0.00 0.00 3.20
481 498 2.733858 GCACGCAACAGGTGAAAGAAAA 60.734 45.455 0.00 0.00 37.60 2.29
487 504 0.941542 CAGGTGAAAGAAAACGGCGA 59.058 50.000 16.62 0.00 0.00 5.54
701 720 1.357334 CGCCCTCTTCTAGCTCGAC 59.643 63.158 0.00 0.00 0.00 4.20
702 721 1.357334 GCCCTCTTCTAGCTCGACG 59.643 63.158 0.00 0.00 0.00 5.12
739 758 4.796231 CCGTTAGCAGAGCGCCGT 62.796 66.667 2.29 0.00 44.04 5.68
740 759 3.545481 CGTTAGCAGAGCGCCGTG 61.545 66.667 2.29 2.25 44.04 4.94
741 760 2.432628 GTTAGCAGAGCGCCGTGT 60.433 61.111 2.29 0.00 44.04 4.49
742 761 2.027625 GTTAGCAGAGCGCCGTGTT 61.028 57.895 2.29 1.88 44.04 3.32
743 762 2.027073 TTAGCAGAGCGCCGTGTTG 61.027 57.895 2.29 0.00 44.04 3.33
746 765 3.349006 CAGAGCGCCGTGTTGCTT 61.349 61.111 2.29 0.00 42.60 3.91
747 766 2.591715 AGAGCGCCGTGTTGCTTT 60.592 55.556 2.29 0.00 42.60 3.51
748 767 2.127232 GAGCGCCGTGTTGCTTTC 60.127 61.111 2.29 0.00 42.60 2.62
749 768 3.595108 GAGCGCCGTGTTGCTTTCC 62.595 63.158 2.29 0.00 42.60 3.13
750 769 4.700365 GCGCCGTGTTGCTTTCCC 62.700 66.667 0.00 0.00 0.00 3.97
751 770 2.978010 CGCCGTGTTGCTTTCCCT 60.978 61.111 0.00 0.00 0.00 4.20
752 771 2.954611 GCCGTGTTGCTTTCCCTC 59.045 61.111 0.00 0.00 0.00 4.30
753 772 2.626780 GCCGTGTTGCTTTCCCTCC 61.627 63.158 0.00 0.00 0.00 4.30
754 773 1.228124 CCGTGTTGCTTTCCCTCCA 60.228 57.895 0.00 0.00 0.00 3.86
755 774 1.237285 CCGTGTTGCTTTCCCTCCAG 61.237 60.000 0.00 0.00 0.00 3.86
756 775 1.856265 CGTGTTGCTTTCCCTCCAGC 61.856 60.000 0.00 0.00 36.49 4.85
757 776 0.538287 GTGTTGCTTTCCCTCCAGCT 60.538 55.000 0.00 0.00 36.92 4.24
758 777 0.250901 TGTTGCTTTCCCTCCAGCTC 60.251 55.000 0.00 0.00 36.92 4.09
759 778 0.037447 GTTGCTTTCCCTCCAGCTCT 59.963 55.000 0.00 0.00 36.92 4.09
760 779 0.326264 TTGCTTTCCCTCCAGCTCTC 59.674 55.000 0.00 0.00 36.92 3.20
770 789 2.125753 CAGCTCTCGTCTGGGTGC 60.126 66.667 0.00 0.00 0.00 5.01
775 799 4.135153 CTCGTCTGGGTGCCCTCG 62.135 72.222 8.91 10.43 36.94 4.63
787 811 4.052229 CCCTCGCTCGTGAACGGT 62.052 66.667 2.59 0.00 40.29 4.83
794 818 2.354188 TCGTGAACGGTGCTGTCG 60.354 61.111 2.59 0.00 40.29 4.35
827 851 3.279434 GGTGTACTCCATTTGACATCCC 58.721 50.000 9.12 0.00 0.00 3.85
828 852 3.054361 GGTGTACTCCATTTGACATCCCT 60.054 47.826 9.12 0.00 0.00 4.20
831 855 3.814504 ACTCCATTTGACATCCCTTGT 57.185 42.857 0.00 0.00 42.79 3.16
833 857 4.589908 ACTCCATTTGACATCCCTTGTAC 58.410 43.478 0.00 0.00 39.18 2.90
834 858 4.289672 ACTCCATTTGACATCCCTTGTACT 59.710 41.667 0.00 0.00 39.18 2.73
835 859 5.222130 ACTCCATTTGACATCCCTTGTACTT 60.222 40.000 0.00 0.00 39.18 2.24
836 860 6.012858 ACTCCATTTGACATCCCTTGTACTTA 60.013 38.462 0.00 0.00 39.18 2.24
837 861 6.969043 TCCATTTGACATCCCTTGTACTTAT 58.031 36.000 0.00 0.00 39.18 1.73
838 862 8.096621 TCCATTTGACATCCCTTGTACTTATA 57.903 34.615 0.00 0.00 39.18 0.98
839 863 8.553153 TCCATTTGACATCCCTTGTACTTATAA 58.447 33.333 0.00 0.00 39.18 0.98
840 864 8.621286 CCATTTGACATCCCTTGTACTTATAAC 58.379 37.037 0.00 0.00 39.18 1.89
965 989 5.764131 CCGTCTATAAAGCTCTCTACCTTG 58.236 45.833 0.00 0.00 0.00 3.61
1006 1030 0.036765 TGGACAGCGGAACATGGTAC 60.037 55.000 0.00 0.00 0.00 3.34
1007 1031 0.743345 GGACAGCGGAACATGGTACC 60.743 60.000 4.43 4.43 0.00 3.34
1011 1035 4.287580 CGGAACATGGTACCGCAA 57.712 55.556 7.57 0.00 40.19 4.85
1012 1036 1.791662 CGGAACATGGTACCGCAAC 59.208 57.895 7.57 0.00 40.19 4.17
1013 1037 0.672401 CGGAACATGGTACCGCAACT 60.672 55.000 7.57 0.00 40.19 3.16
1014 1038 1.084289 GGAACATGGTACCGCAACTC 58.916 55.000 7.57 0.00 0.00 3.01
1015 1039 1.338769 GGAACATGGTACCGCAACTCT 60.339 52.381 7.57 0.00 0.00 3.24
1016 1040 2.423577 GAACATGGTACCGCAACTCTT 58.576 47.619 7.57 0.00 0.00 2.85
1017 1041 3.592059 GAACATGGTACCGCAACTCTTA 58.408 45.455 7.57 0.00 0.00 2.10
1018 1042 2.968675 ACATGGTACCGCAACTCTTAC 58.031 47.619 7.57 0.00 0.00 2.34
1019 1043 2.565834 ACATGGTACCGCAACTCTTACT 59.434 45.455 7.57 0.00 0.00 2.24
1020 1044 2.736144 TGGTACCGCAACTCTTACTG 57.264 50.000 7.57 0.00 0.00 2.74
1021 1045 1.965643 TGGTACCGCAACTCTTACTGT 59.034 47.619 7.57 0.00 0.00 3.55
1022 1046 2.029649 TGGTACCGCAACTCTTACTGTC 60.030 50.000 7.57 0.00 0.00 3.51
1023 1047 2.230750 GGTACCGCAACTCTTACTGTCT 59.769 50.000 0.00 0.00 0.00 3.41
1024 1048 2.440539 ACCGCAACTCTTACTGTCTG 57.559 50.000 0.00 0.00 0.00 3.51
1025 1049 1.961394 ACCGCAACTCTTACTGTCTGA 59.039 47.619 0.00 0.00 0.00 3.27
1026 1050 2.563179 ACCGCAACTCTTACTGTCTGAT 59.437 45.455 0.00 0.00 0.00 2.90
1027 1051 3.182967 CCGCAACTCTTACTGTCTGATC 58.817 50.000 0.00 0.00 0.00 2.92
1028 1052 2.848887 CGCAACTCTTACTGTCTGATCG 59.151 50.000 0.00 0.00 0.00 3.69
1029 1053 3.670895 CGCAACTCTTACTGTCTGATCGT 60.671 47.826 0.00 0.00 0.00 3.73
1030 1054 3.610242 GCAACTCTTACTGTCTGATCGTG 59.390 47.826 0.00 0.00 0.00 4.35
1031 1055 4.616143 GCAACTCTTACTGTCTGATCGTGA 60.616 45.833 0.00 0.00 0.00 4.35
1032 1056 5.645624 CAACTCTTACTGTCTGATCGTGAT 58.354 41.667 0.00 0.00 0.00 3.06
1033 1057 5.493133 ACTCTTACTGTCTGATCGTGATC 57.507 43.478 2.86 2.86 38.29 2.92
1034 1058 4.944317 ACTCTTACTGTCTGATCGTGATCA 59.056 41.667 11.75 11.75 44.83 2.92
1035 1059 5.163703 ACTCTTACTGTCTGATCGTGATCAC 60.164 44.000 16.21 16.21 42.42 3.06
1036 1060 4.944317 TCTTACTGTCTGATCGTGATCACT 59.056 41.667 22.95 5.76 42.42 3.41
1037 1061 5.416013 TCTTACTGTCTGATCGTGATCACTT 59.584 40.000 22.95 10.79 42.42 3.16
1038 1062 3.842820 ACTGTCTGATCGTGATCACTTG 58.157 45.455 22.95 9.20 42.42 3.16
1039 1063 2.602211 CTGTCTGATCGTGATCACTTGC 59.398 50.000 22.95 12.03 42.42 4.01
1040 1064 2.232208 TGTCTGATCGTGATCACTTGCT 59.768 45.455 22.95 5.27 42.42 3.91
1041 1065 3.443681 TGTCTGATCGTGATCACTTGCTA 59.556 43.478 22.95 5.56 42.42 3.49
1042 1066 4.041049 GTCTGATCGTGATCACTTGCTAG 58.959 47.826 22.95 13.99 42.42 3.42
1043 1067 2.793790 CTGATCGTGATCACTTGCTAGC 59.206 50.000 22.95 8.10 42.42 3.42
1044 1068 2.428530 TGATCGTGATCACTTGCTAGCT 59.571 45.455 22.95 0.00 42.42 3.32
1045 1069 3.118992 TGATCGTGATCACTTGCTAGCTT 60.119 43.478 22.95 0.00 42.42 3.74
1046 1070 2.610433 TCGTGATCACTTGCTAGCTTG 58.390 47.619 22.95 10.90 0.00 4.01
1047 1071 2.029020 TCGTGATCACTTGCTAGCTTGT 60.029 45.455 22.95 11.56 0.00 3.16
1048 1072 3.192633 TCGTGATCACTTGCTAGCTTGTA 59.807 43.478 22.95 0.00 0.00 2.41
1049 1073 3.304559 CGTGATCACTTGCTAGCTTGTAC 59.695 47.826 22.95 8.38 0.00 2.90
1050 1074 4.499183 GTGATCACTTGCTAGCTTGTACT 58.501 43.478 18.83 5.29 0.00 2.73
1051 1075 4.328440 GTGATCACTTGCTAGCTTGTACTG 59.672 45.833 18.83 2.99 0.00 2.74
1090 1115 1.763770 CCTCCCTGTTTGTCTGCCT 59.236 57.895 0.00 0.00 0.00 4.75
1097 1122 2.303022 CCTGTTTGTCTGCCTAGAGGAA 59.697 50.000 0.00 0.00 37.39 3.36
1098 1123 3.054802 CCTGTTTGTCTGCCTAGAGGAAT 60.055 47.826 0.00 0.00 37.39 3.01
1099 1124 3.937706 CTGTTTGTCTGCCTAGAGGAATG 59.062 47.826 0.00 0.00 37.39 2.67
1100 1125 3.582647 TGTTTGTCTGCCTAGAGGAATGA 59.417 43.478 0.00 0.00 37.39 2.57
1101 1126 4.041567 TGTTTGTCTGCCTAGAGGAATGAA 59.958 41.667 0.00 0.00 37.39 2.57
1102 1127 4.478206 TTGTCTGCCTAGAGGAATGAAG 57.522 45.455 0.00 0.00 37.39 3.02
1103 1128 2.768527 TGTCTGCCTAGAGGAATGAAGG 59.231 50.000 0.00 0.00 37.39 3.46
1104 1129 2.769095 GTCTGCCTAGAGGAATGAAGGT 59.231 50.000 0.00 0.00 37.39 3.50
1105 1130 3.198853 GTCTGCCTAGAGGAATGAAGGTT 59.801 47.826 0.00 0.00 37.39 3.50
1106 1131 3.452627 TCTGCCTAGAGGAATGAAGGTTC 59.547 47.826 0.00 0.00 37.39 3.62
1107 1132 3.454082 CTGCCTAGAGGAATGAAGGTTCT 59.546 47.826 0.00 0.00 37.39 3.01
1108 1133 3.846588 TGCCTAGAGGAATGAAGGTTCTT 59.153 43.478 0.00 0.00 37.39 2.52
1109 1134 5.030147 TGCCTAGAGGAATGAAGGTTCTTA 58.970 41.667 0.00 0.00 37.39 2.10
1110 1135 5.129485 TGCCTAGAGGAATGAAGGTTCTTAG 59.871 44.000 0.00 0.00 37.39 2.18
1111 1136 5.129650 GCCTAGAGGAATGAAGGTTCTTAGT 59.870 44.000 0.00 0.00 37.39 2.24
1112 1137 6.352308 GCCTAGAGGAATGAAGGTTCTTAGTT 60.352 42.308 0.00 0.00 37.39 2.24
1113 1138 7.044798 CCTAGAGGAATGAAGGTTCTTAGTTG 58.955 42.308 0.00 0.00 37.39 3.16
1114 1139 6.441088 AGAGGAATGAAGGTTCTTAGTTGT 57.559 37.500 0.00 0.00 0.00 3.32
1115 1140 6.468543 AGAGGAATGAAGGTTCTTAGTTGTC 58.531 40.000 0.00 0.00 0.00 3.18
1116 1141 5.561679 AGGAATGAAGGTTCTTAGTTGTCC 58.438 41.667 0.00 0.00 0.00 4.02
1117 1142 5.073144 AGGAATGAAGGTTCTTAGTTGTCCA 59.927 40.000 0.00 0.00 0.00 4.02
1118 1143 5.181433 GGAATGAAGGTTCTTAGTTGTCCAC 59.819 44.000 0.00 0.00 0.00 4.02
1122 1147 4.772886 AGGTTCTTAGTTGTCCACTTGT 57.227 40.909 0.00 0.00 36.88 3.16
1138 1163 3.857093 CACTTGTACTTGTGTTTGGTTGC 59.143 43.478 9.58 0.00 0.00 4.17
1146 1171 3.229276 TGTGTTTGGTTGCAAAGACAG 57.771 42.857 0.00 0.00 41.37 3.51
1153 1178 1.678101 GGTTGCAAAGACAGAACTGCT 59.322 47.619 0.00 0.00 35.78 4.24
1155 1180 3.058639 GGTTGCAAAGACAGAACTGCTAG 60.059 47.826 0.00 0.00 35.78 3.42
1156 1181 3.475566 TGCAAAGACAGAACTGCTAGT 57.524 42.857 1.46 0.00 35.78 2.57
1157 1182 3.133691 TGCAAAGACAGAACTGCTAGTG 58.866 45.455 1.46 4.44 35.78 2.74
1158 1183 2.096019 GCAAAGACAGAACTGCTAGTGC 60.096 50.000 1.46 9.27 40.20 4.40
1159 1184 3.397482 CAAAGACAGAACTGCTAGTGCT 58.603 45.455 1.46 0.00 33.25 4.40
1163 1188 3.829601 AGACAGAACTGCTAGTGCTTACT 59.170 43.478 1.46 0.00 29.53 2.24
1168 1193 6.159988 CAGAACTGCTAGTGCTTACTAAGTT 58.840 40.000 0.00 0.00 29.53 2.66
1192 1217 3.499537 TCAGTAGCATGCTTGTGTTCTTG 59.500 43.478 28.02 12.26 0.00 3.02
1201 1226 2.887152 GCTTGTGTTCTTGAGGGATGTT 59.113 45.455 0.00 0.00 0.00 2.71
1203 1228 3.576078 TGTGTTCTTGAGGGATGTTGT 57.424 42.857 0.00 0.00 0.00 3.32
1236 1287 2.423185 TCATGACCGAAATTGGCATGTC 59.577 45.455 9.29 0.00 40.88 3.06
1241 1292 2.627699 ACCGAAATTGGCATGTCAACTT 59.372 40.909 16.33 11.32 0.00 2.66
1243 1294 3.552684 CCGAAATTGGCATGTCAACTTGT 60.553 43.478 16.33 0.00 0.00 3.16
1246 1297 5.863397 CGAAATTGGCATGTCAACTTGTTAT 59.137 36.000 16.33 0.00 0.00 1.89
1247 1298 7.026562 CGAAATTGGCATGTCAACTTGTTATA 58.973 34.615 16.33 0.00 0.00 0.98
1248 1299 7.701924 CGAAATTGGCATGTCAACTTGTTATAT 59.298 33.333 16.33 0.00 0.00 0.86
1249 1300 8.931385 AAATTGGCATGTCAACTTGTTATATC 57.069 30.769 16.33 0.00 0.00 1.63
1250 1301 7.643569 ATTGGCATGTCAACTTGTTATATCA 57.356 32.000 16.33 0.00 0.00 2.15
1255 1350 7.404985 GCATGTCAACTTGTTATATCACTGAG 58.595 38.462 0.00 0.00 0.00 3.35
1256 1351 7.466455 GCATGTCAACTTGTTATATCACTGAGG 60.466 40.741 0.00 0.00 0.00 3.86
1267 1362 7.552687 TGTTATATCACTGAGGTCAAAATCACC 59.447 37.037 0.00 0.00 0.00 4.02
1389 1526 9.936759 TTTTGGACACATTTTTCTTACTTTTCT 57.063 25.926 0.00 0.00 0.00 2.52
1620 1757 5.880887 GCAAACTAAAGCCCTGTAATCTACT 59.119 40.000 0.00 0.00 0.00 2.57
1626 1763 9.430399 ACTAAAGCCCTGTAATCTACTGTATTA 57.570 33.333 0.00 0.00 0.00 0.98
1838 1975 1.766143 GCGTCCGGCAGATCAACATC 61.766 60.000 0.00 0.00 42.87 3.06
1844 1981 1.083806 GGCAGATCAACATCACGCGA 61.084 55.000 15.93 0.00 32.82 5.87
1978 2123 5.911752 TCCTATTCAGAGTTTCAGAGCATC 58.088 41.667 0.00 0.00 0.00 3.91
1997 2142 5.471456 AGCATCGATGAGTTTCAGACTTTTT 59.529 36.000 29.20 0.00 39.19 1.94
2027 2172 3.161866 GGGAACTTTGTTTGGGCAGATA 58.838 45.455 0.00 0.00 0.00 1.98
2030 2175 5.279960 GGGAACTTTGTTTGGGCAGATAATT 60.280 40.000 0.00 0.00 0.00 1.40
2147 2292 2.048127 ACGAAGAAGAGCCACGGC 60.048 61.111 0.00 0.00 42.33 5.68
2186 2331 0.036022 GCACCTTCTTCTCCAGCTGT 59.964 55.000 13.81 0.00 0.00 4.40
2207 2352 0.256752 TGACGGAAGGGAGGATCGTA 59.743 55.000 0.00 0.00 34.37 3.43
2367 2512 5.103000 ACGAGGTAGAGTCAAATCGATTTG 58.897 41.667 34.80 34.80 46.39 2.32
2381 2526 4.137116 TCGATTTGTCGAGGGAATTCAT 57.863 40.909 7.93 0.00 37.20 2.57
2384 2529 3.848272 TTTGTCGAGGGAATTCATTGC 57.152 42.857 7.93 0.00 0.00 3.56
2390 2535 2.159338 CGAGGGAATTCATTGCTTGGTG 60.159 50.000 7.93 0.00 0.00 4.17
2396 2550 1.985473 TTCATTGCTTGGTGCTGAGT 58.015 45.000 0.00 0.00 43.37 3.41
2412 2566 3.431572 GCTGAGTCAAGAATGTGTCTGAC 59.568 47.826 0.00 0.00 36.40 3.51
2516 2670 4.778143 GGCAAGCCGTGGGACGAT 62.778 66.667 0.00 0.00 46.05 3.73
2561 2715 4.512198 CAGATCTACGTAACCAGAGACGAT 59.488 45.833 0.00 0.00 41.60 3.73
2674 2828 2.101835 GCAGAGCAGAGCAGAGCAC 61.102 63.158 0.00 0.00 0.00 4.40
2678 2832 2.358369 GCAGAGCAGAGCACAGCA 60.358 61.111 0.85 0.00 32.82 4.41
2679 2833 2.392181 GCAGAGCAGAGCACAGCAG 61.392 63.158 0.85 0.00 32.82 4.24
2680 2834 1.292541 CAGAGCAGAGCACAGCAGA 59.707 57.895 0.85 0.00 0.00 4.26
2681 2835 0.738063 CAGAGCAGAGCACAGCAGAG 60.738 60.000 0.85 0.00 0.00 3.35
2682 2836 2.047083 AGCAGAGCACAGCAGAGC 60.047 61.111 0.85 0.00 0.00 4.09
2683 2837 2.358369 GCAGAGCACAGCAGAGCA 60.358 61.111 0.85 0.00 33.43 4.26
2693 2847 2.264166 GCAGAGCAGAGCCGACTT 59.736 61.111 0.00 0.00 0.00 3.01
2703 2857 2.673368 CAGAGCCGACTTGACCAATTAC 59.327 50.000 0.00 0.00 0.00 1.89
2713 2867 6.629515 CGACTTGACCAATTACCCATCTCTTA 60.630 42.308 0.00 0.00 0.00 2.10
2747 2910 4.186926 CTGATCATCACTTGACCGAATGT 58.813 43.478 0.00 0.00 37.11 2.71
2749 2912 5.109210 TGATCATCACTTGACCGAATGTAC 58.891 41.667 0.00 0.00 37.11 2.90
2758 2921 2.268298 GACCGAATGTACGTGCAGATT 58.732 47.619 12.93 2.02 0.00 2.40
2920 3083 1.218316 CTACTTCACCTCCGCCACC 59.782 63.158 0.00 0.00 0.00 4.61
2944 3107 2.434774 GGGAAGGTGGTCGGCTTT 59.565 61.111 0.00 0.00 0.00 3.51
3064 3227 1.214589 CGTTCCCAAGATCGTCGGT 59.785 57.895 0.00 0.00 31.87 4.69
3082 3245 1.386772 TCCCAACCCCAAGACTGGT 60.387 57.895 0.00 0.00 41.72 4.00
3085 3248 0.478507 CCAACCCCAAGACTGGTTCT 59.521 55.000 0.00 0.00 42.88 3.01
3091 3254 3.852578 ACCCCAAGACTGGTTCTGATAAT 59.147 43.478 0.00 0.00 41.72 1.28
3168 3331 2.096013 GCTTCGCCTACCATTTCAGTTC 59.904 50.000 0.00 0.00 0.00 3.01
3182 3345 1.000163 TCAGTTCGCAGGAGAGTGTTC 60.000 52.381 0.00 0.00 0.00 3.18
3188 3351 0.601311 GCAGGAGAGTGTTCTTGCGT 60.601 55.000 0.00 0.00 39.81 5.24
3189 3352 1.871080 CAGGAGAGTGTTCTTGCGTT 58.129 50.000 0.00 0.00 32.53 4.84
3456 3669 5.879223 ACATTTCAAACAATTGCAAAGGACA 59.121 32.000 1.71 0.00 36.45 4.02
3457 3670 6.037391 ACATTTCAAACAATTGCAAAGGACAG 59.963 34.615 1.71 0.00 36.45 3.51
3458 3671 4.057406 TCAAACAATTGCAAAGGACAGG 57.943 40.909 1.71 0.00 36.45 4.00
3459 3672 2.531522 AACAATTGCAAAGGACAGGC 57.468 45.000 1.71 0.00 0.00 4.85
3460 3673 0.314935 ACAATTGCAAAGGACAGGCG 59.685 50.000 1.71 0.00 0.00 5.52
3461 3674 1.010419 CAATTGCAAAGGACAGGCGC 61.010 55.000 1.71 0.00 0.00 6.53
3462 3675 1.462731 AATTGCAAAGGACAGGCGCA 61.463 50.000 10.83 0.00 0.00 6.09
3463 3676 1.252904 ATTGCAAAGGACAGGCGCAT 61.253 50.000 10.83 0.00 31.67 4.73
3464 3677 1.462731 TTGCAAAGGACAGGCGCATT 61.463 50.000 10.83 0.00 31.67 3.56
3465 3678 1.153958 GCAAAGGACAGGCGCATTC 60.154 57.895 10.83 0.96 0.00 2.67
3466 3679 1.508088 CAAAGGACAGGCGCATTCC 59.492 57.895 10.83 11.60 0.00 3.01
3467 3680 1.074775 AAAGGACAGGCGCATTCCA 59.925 52.632 19.75 0.00 0.00 3.53
3468 3681 1.244019 AAAGGACAGGCGCATTCCAC 61.244 55.000 19.75 2.08 0.00 4.02
3469 3682 2.045926 GGACAGGCGCATTCCACT 60.046 61.111 10.83 0.00 0.00 4.00
3470 3683 1.675641 GGACAGGCGCATTCCACTT 60.676 57.895 10.83 0.00 0.00 3.16
3471 3684 1.648467 GGACAGGCGCATTCCACTTC 61.648 60.000 10.83 0.00 0.00 3.01
3472 3685 1.648467 GACAGGCGCATTCCACTTCC 61.648 60.000 10.83 0.00 0.00 3.46
3473 3686 2.044946 AGGCGCATTCCACTTCCC 60.045 61.111 10.83 0.00 0.00 3.97
3474 3687 3.140814 GGCGCATTCCACTTCCCC 61.141 66.667 10.83 0.00 0.00 4.81
3475 3688 2.361104 GCGCATTCCACTTCCCCA 60.361 61.111 0.30 0.00 0.00 4.96
3476 3689 1.976474 GCGCATTCCACTTCCCCAA 60.976 57.895 0.30 0.00 0.00 4.12
3477 3690 1.322538 GCGCATTCCACTTCCCCAAT 61.323 55.000 0.30 0.00 0.00 3.16
3478 3691 1.185315 CGCATTCCACTTCCCCAATT 58.815 50.000 0.00 0.00 0.00 2.32
3479 3692 1.135024 CGCATTCCACTTCCCCAATTG 60.135 52.381 0.00 0.00 0.00 2.32
3480 3693 1.405933 GCATTCCACTTCCCCAATTGC 60.406 52.381 0.00 0.00 0.00 3.56
3481 3694 1.135024 CATTCCACTTCCCCAATTGCG 60.135 52.381 0.00 0.00 0.00 4.85
3482 3695 0.111446 TTCCACTTCCCCAATTGCGA 59.889 50.000 0.00 0.00 0.00 5.10
3483 3696 0.331278 TCCACTTCCCCAATTGCGAT 59.669 50.000 0.00 0.00 0.00 4.58
3484 3697 1.562008 TCCACTTCCCCAATTGCGATA 59.438 47.619 0.00 0.00 0.00 2.92
3485 3698 1.949525 CCACTTCCCCAATTGCGATAG 59.050 52.381 0.00 0.00 0.00 2.08
3486 3699 2.643551 CACTTCCCCAATTGCGATAGT 58.356 47.619 0.00 0.00 39.35 2.12
3487 3700 2.614057 CACTTCCCCAATTGCGATAGTC 59.386 50.000 0.00 0.00 39.35 2.59
3488 3701 2.505819 ACTTCCCCAATTGCGATAGTCT 59.494 45.455 0.00 0.00 39.35 3.24
3489 3702 2.910688 TCCCCAATTGCGATAGTCTC 57.089 50.000 0.00 0.00 39.35 3.36
3503 3716 5.744666 GATAGTCTCGATAGGATAGCCAC 57.255 47.826 0.00 0.00 36.29 5.01
3504 3717 2.428491 AGTCTCGATAGGATAGCCACG 58.572 52.381 0.00 2.17 36.29 4.94
3505 3718 1.135632 GTCTCGATAGGATAGCCACGC 60.136 57.143 0.00 0.00 36.29 5.34
3506 3719 1.169577 CTCGATAGGATAGCCACGCT 58.830 55.000 0.00 0.00 43.41 5.07
3507 3720 1.131504 CTCGATAGGATAGCCACGCTC 59.868 57.143 0.00 0.00 40.44 5.03
3508 3721 0.171455 CGATAGGATAGCCACGCTCC 59.829 60.000 0.00 0.00 40.44 4.70
3509 3722 0.533032 GATAGGATAGCCACGCTCCC 59.467 60.000 0.00 0.00 40.44 4.30
3510 3723 0.905337 ATAGGATAGCCACGCTCCCC 60.905 60.000 0.00 0.00 40.44 4.81
3511 3724 3.942439 GGATAGCCACGCTCCCCC 61.942 72.222 0.00 0.00 40.44 5.40
3512 3725 4.301027 GATAGCCACGCTCCCCCG 62.301 72.222 0.00 0.00 40.44 5.73
3602 3815 4.803426 CCTCGTCGGTGCAGGCTC 62.803 72.222 0.00 0.00 0.00 4.70
3603 3816 4.803426 CTCGTCGGTGCAGGCTCC 62.803 72.222 2.34 2.34 0.00 4.70
3617 3830 4.135153 CTCCGGACCGCTGGACAG 62.135 72.222 8.86 0.00 44.72 3.51
3627 3840 2.669569 CTGGACAGCCCCGTGTTG 60.670 66.667 0.00 0.00 0.00 3.33
3628 3841 4.263572 TGGACAGCCCCGTGTTGG 62.264 66.667 0.00 0.00 37.55 3.77
3656 3869 4.007644 CCTGTCGCTGGTGCCAGA 62.008 66.667 21.34 0.00 46.30 3.86
3657 3870 2.740055 CTGTCGCTGGTGCCAGAC 60.740 66.667 21.34 12.10 46.30 3.51
3658 3871 3.231889 CTGTCGCTGGTGCCAGACT 62.232 63.158 21.34 0.00 46.30 3.24
3659 3872 2.433318 GTCGCTGGTGCCAGACTC 60.433 66.667 21.34 6.78 46.30 3.36
3660 3873 3.695606 TCGCTGGTGCCAGACTCC 61.696 66.667 21.34 3.28 46.30 3.85
3661 3874 4.767255 CGCTGGTGCCAGACTCCC 62.767 72.222 21.34 2.92 46.30 4.30
3662 3875 3.325753 GCTGGTGCCAGACTCCCT 61.326 66.667 21.34 0.00 46.30 4.20
3663 3876 2.667418 CTGGTGCCAGACTCCCTG 59.333 66.667 12.66 0.00 46.30 4.45
3671 3884 2.424474 CAGACTCCCTGGATCTCGG 58.576 63.158 0.00 0.00 39.23 4.63
3672 3885 1.112315 CAGACTCCCTGGATCTCGGG 61.112 65.000 12.13 12.13 42.05 5.14
3678 3891 1.668294 CCTGGATCTCGGGGATTCG 59.332 63.158 0.00 0.00 38.27 3.34
3679 3892 1.668294 CTGGATCTCGGGGATTCGG 59.332 63.158 0.00 0.00 32.62 4.30
3680 3893 2.344129 GGATCTCGGGGATTCGGC 59.656 66.667 0.00 0.00 34.33 5.54
3681 3894 2.344129 GATCTCGGGGATTCGGCC 59.656 66.667 0.00 0.00 34.33 6.13
3682 3895 2.122813 ATCTCGGGGATTCGGCCT 60.123 61.111 0.00 0.00 0.00 5.19
3683 3896 2.161078 GATCTCGGGGATTCGGCCTC 62.161 65.000 0.00 0.00 34.33 4.70
3684 3897 3.930012 CTCGGGGATTCGGCCTCC 61.930 72.222 0.00 0.00 0.00 4.30
3688 3901 3.878667 GGGATTCGGCCTCCCCAG 61.879 72.222 16.36 0.00 45.80 4.45
3689 3902 2.768344 GGATTCGGCCTCCCCAGA 60.768 66.667 0.00 0.00 0.00 3.86
3690 3903 2.150051 GGATTCGGCCTCCCCAGAT 61.150 63.158 0.00 0.00 0.00 2.90
3691 3904 1.373059 GATTCGGCCTCCCCAGATC 59.627 63.158 0.00 0.00 0.00 2.75
3692 3905 2.118233 GATTCGGCCTCCCCAGATCC 62.118 65.000 0.00 0.00 0.00 3.36
3696 3909 3.090532 GCCTCCCCAGATCCGGTT 61.091 66.667 0.00 0.00 0.00 4.44
3697 3910 2.680370 GCCTCCCCAGATCCGGTTT 61.680 63.158 0.00 0.00 0.00 3.27
3698 3911 1.527370 CCTCCCCAGATCCGGTTTC 59.473 63.158 0.00 0.00 0.00 2.78
3699 3912 1.527370 CTCCCCAGATCCGGTTTCC 59.473 63.158 0.00 0.00 0.00 3.13
3700 3913 1.229690 TCCCCAGATCCGGTTTCCA 60.230 57.895 0.00 0.00 0.00 3.53
3701 3914 1.077716 CCCCAGATCCGGTTTCCAC 60.078 63.158 0.00 0.00 0.00 4.02
3702 3915 1.449601 CCCAGATCCGGTTTCCACG 60.450 63.158 0.00 0.00 0.00 4.94
3703 3916 2.106683 CCAGATCCGGTTTCCACGC 61.107 63.158 0.00 0.00 0.00 5.34
3704 3917 2.106683 CAGATCCGGTTTCCACGCC 61.107 63.158 0.00 0.00 0.00 5.68
3705 3918 3.192922 GATCCGGTTTCCACGCCG 61.193 66.667 0.00 0.00 46.80 6.46
3728 3941 4.759564 GCTGCTGCGAGTTGAATG 57.240 55.556 0.00 0.00 0.00 2.67
3729 3942 1.513586 GCTGCTGCGAGTTGAATGC 60.514 57.895 0.00 0.00 0.00 3.56
3730 3943 1.136147 CTGCTGCGAGTTGAATGCC 59.864 57.895 0.00 0.00 0.00 4.40
3731 3944 2.262471 CTGCTGCGAGTTGAATGCCC 62.262 60.000 0.00 0.00 0.00 5.36
3732 3945 3.056313 GCTGCGAGTTGAATGCCCC 62.056 63.158 0.00 0.00 0.00 5.80
3733 3946 2.361104 TGCGAGTTGAATGCCCCC 60.361 61.111 0.00 0.00 0.00 5.40
4091 4304 4.160928 ATCCGACGGTCTCTAGCC 57.839 61.111 14.79 0.00 0.00 3.93
4092 4305 1.528776 ATCCGACGGTCTCTAGCCC 60.529 63.158 14.79 0.00 0.00 5.19
4093 4306 2.280404 ATCCGACGGTCTCTAGCCCA 62.280 60.000 14.79 0.00 0.00 5.36
4094 4307 2.772691 CCGACGGTCTCTAGCCCAC 61.773 68.421 5.48 0.00 0.00 4.61
4095 4308 2.772691 CGACGGTCTCTAGCCCACC 61.773 68.421 6.57 0.00 0.00 4.61
4096 4309 2.363925 ACGGTCTCTAGCCCACCC 60.364 66.667 0.00 0.00 0.00 4.61
4097 4310 3.155167 CGGTCTCTAGCCCACCCC 61.155 72.222 0.00 0.00 0.00 4.95
4098 4311 2.768769 GGTCTCTAGCCCACCCCC 60.769 72.222 0.00 0.00 0.00 5.40
4099 4312 2.369001 GTCTCTAGCCCACCCCCT 59.631 66.667 0.00 0.00 0.00 4.79
4100 4313 2.066999 GTCTCTAGCCCACCCCCTG 61.067 68.421 0.00 0.00 0.00 4.45
4101 4314 3.483869 CTCTAGCCCACCCCCTGC 61.484 72.222 0.00 0.00 0.00 4.85
4102 4315 4.024984 TCTAGCCCACCCCCTGCT 62.025 66.667 0.00 0.00 39.10 4.24
4103 4316 3.483869 CTAGCCCACCCCCTGCTC 61.484 72.222 0.00 0.00 36.57 4.26
4107 4320 4.181010 CCCACCCCCTGCTCGATG 62.181 72.222 0.00 0.00 0.00 3.84
4108 4321 4.864334 CCACCCCCTGCTCGATGC 62.864 72.222 0.00 0.00 43.25 3.91
4109 4322 4.864334 CACCCCCTGCTCGATGCC 62.864 72.222 4.73 0.00 42.00 4.40
4111 4324 4.559063 CCCCCTGCTCGATGCCTG 62.559 72.222 4.73 0.00 42.00 4.85
4113 4326 4.478371 CCCTGCTCGATGCCTGCA 62.478 66.667 0.00 0.00 42.00 4.41
4115 4328 2.125229 CTGCTCGATGCCTGCAGT 60.125 61.111 13.81 0.00 46.23 4.40
4116 4329 2.125391 TGCTCGATGCCTGCAGTC 60.125 61.111 13.81 0.00 42.00 3.51
4117 4330 2.894387 GCTCGATGCCTGCAGTCC 60.894 66.667 13.81 3.71 35.15 3.85
4118 4331 2.580815 CTCGATGCCTGCAGTCCA 59.419 61.111 13.81 9.85 0.00 4.02
4119 4332 1.145598 CTCGATGCCTGCAGTCCAT 59.854 57.895 13.81 14.36 0.00 3.41
4120 4333 0.879400 CTCGATGCCTGCAGTCCATC 60.879 60.000 24.13 24.13 33.71 3.51
4121 4334 1.153309 CGATGCCTGCAGTCCATCA 60.153 57.895 29.00 14.94 36.12 3.07
4122 4335 0.534427 CGATGCCTGCAGTCCATCAT 60.534 55.000 29.00 17.87 36.12 2.45
4123 4336 1.236628 GATGCCTGCAGTCCATCATC 58.763 55.000 26.90 19.37 36.32 2.92
4124 4337 0.534427 ATGCCTGCAGTCCATCATCG 60.534 55.000 13.81 0.00 0.00 3.84
4125 4338 1.153289 GCCTGCAGTCCATCATCGT 60.153 57.895 13.81 0.00 0.00 3.73
4126 4339 1.156645 GCCTGCAGTCCATCATCGTC 61.157 60.000 13.81 0.00 0.00 4.20
4127 4340 0.873312 CCTGCAGTCCATCATCGTCG 60.873 60.000 13.81 0.00 0.00 5.12
4128 4341 1.485838 CTGCAGTCCATCATCGTCGC 61.486 60.000 5.25 0.00 0.00 5.19
4129 4342 2.580470 GCAGTCCATCATCGTCGCG 61.580 63.158 0.00 0.00 0.00 5.87
4130 4343 2.278857 AGTCCATCATCGTCGCGC 60.279 61.111 0.00 0.00 0.00 6.86
4131 4344 3.330853 GTCCATCATCGTCGCGCC 61.331 66.667 0.00 0.00 0.00 6.53
4132 4345 4.585526 TCCATCATCGTCGCGCCC 62.586 66.667 0.00 0.00 0.00 6.13
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.547181 ACCGCTACTCTTCTTTAAAATGC 57.453 39.130 0.00 0.00 0.00 3.56
11 12 2.427812 GCTCCTAGAAACCGCTACTCTT 59.572 50.000 0.00 0.00 0.00 2.85
13 14 1.749634 TGCTCCTAGAAACCGCTACTC 59.250 52.381 0.00 0.00 0.00 2.59
14 15 1.848652 TGCTCCTAGAAACCGCTACT 58.151 50.000 0.00 0.00 0.00 2.57
17 18 0.685097 TGTTGCTCCTAGAAACCGCT 59.315 50.000 0.00 0.00 32.60 5.52
25 26 2.290641 AGCGTTTGTTTGTTGCTCCTAG 59.709 45.455 0.00 0.00 0.00 3.02
27 28 1.102978 AGCGTTTGTTTGTTGCTCCT 58.897 45.000 0.00 0.00 0.00 3.69
40 41 3.715628 AACAAGATCAGCAAAGCGTTT 57.284 38.095 0.00 0.00 0.00 3.60
45 46 5.860182 CACCACATTAACAAGATCAGCAAAG 59.140 40.000 0.00 0.00 0.00 2.77
50 51 7.672983 AAGTACACCACATTAACAAGATCAG 57.327 36.000 0.00 0.00 0.00 2.90
92 94 8.842280 TCCTTTCGACTTAAAAGCAAAGAAATA 58.158 29.630 9.40 0.11 33.33 1.40
97 99 5.685954 GGTTCCTTTCGACTTAAAAGCAAAG 59.314 40.000 0.00 0.00 33.33 2.77
110 112 0.250553 ACAATGGCGGTTCCTTTCGA 60.251 50.000 0.00 0.00 35.26 3.71
112 114 2.812358 AAACAATGGCGGTTCCTTTC 57.188 45.000 0.00 0.00 35.26 2.62
121 123 3.773860 TGGCTACATTAAACAATGGCG 57.226 42.857 2.72 0.00 34.56 5.69
136 138 1.702401 TGTGGAGTTGGATGTTGGCTA 59.298 47.619 0.00 0.00 0.00 3.93
138 140 1.000274 GTTGTGGAGTTGGATGTTGGC 60.000 52.381 0.00 0.00 0.00 4.52
141 143 1.142060 TCCGTTGTGGAGTTGGATGTT 59.858 47.619 0.00 0.00 43.74 2.71
143 145 3.623848 TCCGTTGTGGAGTTGGATG 57.376 52.632 0.00 0.00 43.74 3.51
153 155 2.549282 CGGCTTCGTTCCGTTGTG 59.451 61.111 4.97 0.00 41.85 3.33
163 165 3.559655 TCATGGATTTATCAACGGCTTCG 59.440 43.478 0.00 0.00 40.22 3.79
197 199 0.462047 CGGGGGCACTTCACTATGAC 60.462 60.000 0.00 0.00 0.00 3.06
216 218 4.440127 CATGCGGGGGCACTTTGC 62.440 66.667 0.00 0.00 44.08 3.68
217 219 2.990967 ACATGCGGGGGCACTTTG 60.991 61.111 0.00 0.00 0.00 2.77
218 220 2.990967 CACATGCGGGGGCACTTT 60.991 61.111 0.00 0.00 0.00 2.66
219 221 4.284550 ACACATGCGGGGGCACTT 62.285 61.111 0.00 0.00 0.00 3.16
223 225 2.902423 TATTCCACACATGCGGGGGC 62.902 60.000 1.27 0.00 0.00 5.80
224 226 0.178992 ATATTCCACACATGCGGGGG 60.179 55.000 1.27 0.44 0.00 5.40
225 227 0.953727 CATATTCCACACATGCGGGG 59.046 55.000 0.00 0.00 0.00 5.73
248 250 4.142902 CGTCAACACTGTTTTGTTCTCAGT 60.143 41.667 6.58 0.00 42.14 3.41
263 265 0.923911 GAGTTTGTGCGCGTCAACAC 60.924 55.000 15.45 7.89 37.31 3.32
264 266 1.350319 GAGTTTGTGCGCGTCAACA 59.650 52.632 15.45 7.70 0.00 3.33
265 267 1.368850 GGAGTTTGTGCGCGTCAAC 60.369 57.895 15.45 11.35 0.00 3.18
267 269 2.202946 TGGAGTTTGTGCGCGTCA 60.203 55.556 8.43 3.08 0.00 4.35
270 272 4.368808 CGGTGGAGTTTGTGCGCG 62.369 66.667 0.00 0.00 0.00 6.86
271 273 1.017177 TATCGGTGGAGTTTGTGCGC 61.017 55.000 0.00 0.00 0.00 6.09
273 275 1.463444 GTGTATCGGTGGAGTTTGTGC 59.537 52.381 0.00 0.00 0.00 4.57
275 277 1.614903 TCGTGTATCGGTGGAGTTTGT 59.385 47.619 0.00 0.00 40.32 2.83
276 278 2.094906 TCTCGTGTATCGGTGGAGTTTG 60.095 50.000 0.00 0.00 40.32 2.93
277 279 2.094854 GTCTCGTGTATCGGTGGAGTTT 60.095 50.000 0.00 0.00 40.32 2.66
279 281 1.093159 GTCTCGTGTATCGGTGGAGT 58.907 55.000 0.00 0.00 40.32 3.85
281 283 1.092348 CTGTCTCGTGTATCGGTGGA 58.908 55.000 0.00 0.00 40.32 4.02
282 284 1.092348 TCTGTCTCGTGTATCGGTGG 58.908 55.000 0.00 0.00 40.32 4.61
283 285 1.738350 AGTCTGTCTCGTGTATCGGTG 59.262 52.381 0.00 0.00 40.32 4.94
285 287 3.196463 AGTAGTCTGTCTCGTGTATCGG 58.804 50.000 0.00 0.00 40.32 4.18
286 288 4.085670 CGTAGTAGTCTGTCTCGTGTATCG 60.086 50.000 0.00 0.00 41.41 2.92
287 289 4.208873 CCGTAGTAGTCTGTCTCGTGTATC 59.791 50.000 0.00 0.00 0.00 2.24
288 290 4.118410 CCGTAGTAGTCTGTCTCGTGTAT 58.882 47.826 0.00 0.00 0.00 2.29
289 291 3.515630 CCGTAGTAGTCTGTCTCGTGTA 58.484 50.000 0.00 0.00 0.00 2.90
290 292 2.344950 CCGTAGTAGTCTGTCTCGTGT 58.655 52.381 0.00 0.00 0.00 4.49
291 293 1.664659 CCCGTAGTAGTCTGTCTCGTG 59.335 57.143 0.00 0.00 0.00 4.35
292 294 1.552337 TCCCGTAGTAGTCTGTCTCGT 59.448 52.381 0.00 0.00 0.00 4.18
293 295 2.306341 TCCCGTAGTAGTCTGTCTCG 57.694 55.000 0.00 0.00 0.00 4.04
294 296 3.608796 AGTTCCCGTAGTAGTCTGTCTC 58.391 50.000 0.00 0.00 0.00 3.36
295 297 3.608796 GAGTTCCCGTAGTAGTCTGTCT 58.391 50.000 0.00 0.00 0.00 3.41
296 298 2.351111 CGAGTTCCCGTAGTAGTCTGTC 59.649 54.545 0.00 0.00 0.00 3.51
297 299 2.289945 ACGAGTTCCCGTAGTAGTCTGT 60.290 50.000 0.00 0.00 41.44 3.41
298 300 2.351111 GACGAGTTCCCGTAGTAGTCTG 59.649 54.545 0.00 0.00 43.49 3.51
299 301 2.027745 TGACGAGTTCCCGTAGTAGTCT 60.028 50.000 0.00 0.00 43.49 3.24
300 302 2.350522 TGACGAGTTCCCGTAGTAGTC 58.649 52.381 0.00 0.00 43.49 2.59
301 303 2.479566 TGACGAGTTCCCGTAGTAGT 57.520 50.000 0.00 0.00 43.49 2.73
302 304 2.681848 ACATGACGAGTTCCCGTAGTAG 59.318 50.000 0.00 0.00 43.49 2.57
303 305 2.679837 GACATGACGAGTTCCCGTAGTA 59.320 50.000 0.00 0.00 43.49 1.82
304 306 1.471684 GACATGACGAGTTCCCGTAGT 59.528 52.381 0.00 0.00 43.49 2.73
305 307 1.202268 GGACATGACGAGTTCCCGTAG 60.202 57.143 0.00 0.00 43.49 3.51
306 308 0.813184 GGACATGACGAGTTCCCGTA 59.187 55.000 0.00 0.00 43.49 4.02
307 309 0.898789 AGGACATGACGAGTTCCCGT 60.899 55.000 0.00 0.00 46.43 5.28
308 310 0.246635 AAGGACATGACGAGTTCCCG 59.753 55.000 0.00 0.00 0.00 5.14
309 311 1.405661 GGAAGGACATGACGAGTTCCC 60.406 57.143 0.00 0.00 0.00 3.97
310 312 1.405661 GGGAAGGACATGACGAGTTCC 60.406 57.143 0.00 6.86 33.97 3.62
311 313 1.550976 AGGGAAGGACATGACGAGTTC 59.449 52.381 0.00 0.00 0.00 3.01
312 314 1.645710 AGGGAAGGACATGACGAGTT 58.354 50.000 0.00 0.00 0.00 3.01
313 315 2.291670 ACTAGGGAAGGACATGACGAGT 60.292 50.000 0.00 0.00 0.00 4.18
314 316 2.379972 ACTAGGGAAGGACATGACGAG 58.620 52.381 0.00 0.00 0.00 4.18
315 317 2.496070 CAACTAGGGAAGGACATGACGA 59.504 50.000 0.00 0.00 0.00 4.20
316 318 2.496070 TCAACTAGGGAAGGACATGACG 59.504 50.000 0.00 0.00 0.00 4.35
317 319 4.553330 TTCAACTAGGGAAGGACATGAC 57.447 45.455 0.00 0.00 0.00 3.06
318 320 5.779241 AATTCAACTAGGGAAGGACATGA 57.221 39.130 0.00 0.00 0.00 3.07
319 321 5.529060 GCTAATTCAACTAGGGAAGGACATG 59.471 44.000 0.00 0.00 0.00 3.21
320 322 5.430089 AGCTAATTCAACTAGGGAAGGACAT 59.570 40.000 0.00 0.00 0.00 3.06
321 323 4.783227 AGCTAATTCAACTAGGGAAGGACA 59.217 41.667 0.00 0.00 0.00 4.02
322 324 5.119694 CAGCTAATTCAACTAGGGAAGGAC 58.880 45.833 0.00 0.00 0.00 3.85
323 325 4.164221 CCAGCTAATTCAACTAGGGAAGGA 59.836 45.833 0.00 0.00 0.00 3.36
324 326 4.080299 ACCAGCTAATTCAACTAGGGAAGG 60.080 45.833 0.00 0.00 0.00 3.46
325 327 5.104259 ACCAGCTAATTCAACTAGGGAAG 57.896 43.478 0.00 0.00 0.00 3.46
326 328 5.394883 CGTACCAGCTAATTCAACTAGGGAA 60.395 44.000 0.00 0.00 0.00 3.97
327 329 4.098960 CGTACCAGCTAATTCAACTAGGGA 59.901 45.833 0.00 0.00 0.00 4.20
328 330 4.369182 CGTACCAGCTAATTCAACTAGGG 58.631 47.826 0.00 0.00 0.00 3.53
329 331 4.369182 CCGTACCAGCTAATTCAACTAGG 58.631 47.826 0.00 0.00 0.00 3.02
330 332 4.369182 CCCGTACCAGCTAATTCAACTAG 58.631 47.826 0.00 0.00 0.00 2.57
331 333 3.133362 CCCCGTACCAGCTAATTCAACTA 59.867 47.826 0.00 0.00 0.00 2.24
345 347 3.200329 AACTTGGTGGCCCCGTACC 62.200 63.158 0.00 0.48 37.48 3.34
398 401 4.778427 AGAGAAGAAAAACCTCGTCCCTAT 59.222 41.667 0.00 0.00 32.52 2.57
402 405 2.987821 CGAGAGAAGAAAAACCTCGTCC 59.012 50.000 0.00 0.00 41.02 4.79
422 425 1.745489 CGAGGCCTTCCCCTTTTCG 60.745 63.158 6.77 0.00 34.69 3.46
481 498 0.099082 TTTCGCTTTTGTTTCGCCGT 59.901 45.000 0.00 0.00 0.00 5.68
487 504 5.890334 TCAGAGAATGTTTCGCTTTTGTTT 58.110 33.333 0.00 0.00 37.74 2.83
548 567 3.842007 TCACGGTGGGAAACTAAAGAA 57.158 42.857 8.50 0.00 0.00 2.52
732 751 3.660111 GGAAAGCAACACGGCGCT 61.660 61.111 6.90 0.00 41.20 5.92
735 754 2.626780 GGAGGGAAAGCAACACGGC 61.627 63.158 0.00 0.00 0.00 5.68
736 755 1.228124 TGGAGGGAAAGCAACACGG 60.228 57.895 0.00 0.00 0.00 4.94
737 756 1.856265 GCTGGAGGGAAAGCAACACG 61.856 60.000 0.00 0.00 39.31 4.49
738 757 0.538287 AGCTGGAGGGAAAGCAACAC 60.538 55.000 0.00 0.00 42.06 3.32
739 758 0.250901 GAGCTGGAGGGAAAGCAACA 60.251 55.000 0.00 0.00 42.06 3.33
740 759 0.037447 AGAGCTGGAGGGAAAGCAAC 59.963 55.000 0.00 0.00 42.06 4.17
741 760 0.326264 GAGAGCTGGAGGGAAAGCAA 59.674 55.000 0.00 0.00 42.06 3.91
742 761 1.892819 CGAGAGCTGGAGGGAAAGCA 61.893 60.000 0.00 0.00 42.06 3.91
743 762 1.153469 CGAGAGCTGGAGGGAAAGC 60.153 63.158 0.00 0.00 39.82 3.51
744 763 0.174617 GACGAGAGCTGGAGGGAAAG 59.825 60.000 0.00 0.00 0.00 2.62
745 764 0.251832 AGACGAGAGCTGGAGGGAAA 60.252 55.000 0.00 0.00 0.00 3.13
746 765 0.967887 CAGACGAGAGCTGGAGGGAA 60.968 60.000 0.00 0.00 33.55 3.97
747 766 1.379176 CAGACGAGAGCTGGAGGGA 60.379 63.158 0.00 0.00 33.55 4.20
748 767 3.205395 CAGACGAGAGCTGGAGGG 58.795 66.667 0.00 0.00 33.55 4.30
753 772 2.125753 GCACCCAGACGAGAGCTG 60.126 66.667 0.00 0.00 35.80 4.24
754 773 3.386237 GGCACCCAGACGAGAGCT 61.386 66.667 0.00 0.00 0.00 4.09
770 789 4.052229 ACCGTTCACGAGCGAGGG 62.052 66.667 4.77 0.00 43.02 4.30
775 799 2.658707 GACAGCACCGTTCACGAGC 61.659 63.158 0.00 4.85 43.02 5.03
794 818 0.108615 AGTACACCACGATGCTCAGC 60.109 55.000 0.00 0.00 0.00 4.26
871 895 1.205893 GGTAGTCTGACAGGAAGCAGG 59.794 57.143 10.88 0.00 33.05 4.85
949 973 3.119101 CGCCTTCAAGGTAGAGAGCTTTA 60.119 47.826 5.03 0.00 41.49 1.85
950 974 2.354203 CGCCTTCAAGGTAGAGAGCTTT 60.354 50.000 5.03 0.00 41.49 3.51
965 989 1.973812 AAAGCCCAGAAGCGCCTTC 60.974 57.895 2.29 7.67 40.45 3.46
1006 1030 2.724977 TCAGACAGTAAGAGTTGCGG 57.275 50.000 0.00 0.00 0.00 5.69
1007 1031 2.848887 CGATCAGACAGTAAGAGTTGCG 59.151 50.000 0.00 0.00 0.00 4.85
1008 1032 3.610242 CACGATCAGACAGTAAGAGTTGC 59.390 47.826 0.00 0.00 0.00 4.17
1009 1033 5.048153 TCACGATCAGACAGTAAGAGTTG 57.952 43.478 0.00 0.00 0.00 3.16
1010 1034 5.416013 TGATCACGATCAGACAGTAAGAGTT 59.584 40.000 5.62 0.00 42.42 3.01
1011 1035 4.944317 TGATCACGATCAGACAGTAAGAGT 59.056 41.667 5.62 0.00 42.42 3.24
1012 1036 5.491635 TGATCACGATCAGACAGTAAGAG 57.508 43.478 5.62 0.00 42.42 2.85
1023 1047 2.428530 AGCTAGCAAGTGATCACGATCA 59.571 45.455 19.85 5.62 44.83 2.92
1024 1048 3.090952 AGCTAGCAAGTGATCACGATC 57.909 47.619 19.85 12.24 38.29 3.69
1025 1049 3.193263 CAAGCTAGCAAGTGATCACGAT 58.807 45.455 19.85 10.55 36.20 3.73
1026 1050 2.029020 ACAAGCTAGCAAGTGATCACGA 60.029 45.455 19.85 4.07 36.20 4.35
1027 1051 2.341257 ACAAGCTAGCAAGTGATCACG 58.659 47.619 19.85 8.22 36.20 4.35
1028 1052 4.328440 CAGTACAAGCTAGCAAGTGATCAC 59.672 45.833 18.47 18.47 0.00 3.06
1029 1053 4.021104 ACAGTACAAGCTAGCAAGTGATCA 60.021 41.667 18.83 0.00 0.00 2.92
1030 1054 4.328440 CACAGTACAAGCTAGCAAGTGATC 59.672 45.833 18.83 9.56 0.00 2.92
1031 1055 4.248859 CACAGTACAAGCTAGCAAGTGAT 58.751 43.478 18.83 5.17 0.00 3.06
1032 1056 3.069586 ACACAGTACAAGCTAGCAAGTGA 59.930 43.478 18.83 1.73 0.00 3.41
1033 1057 3.393800 ACACAGTACAAGCTAGCAAGTG 58.606 45.455 18.83 13.97 0.00 3.16
1034 1058 3.753294 ACACAGTACAAGCTAGCAAGT 57.247 42.857 18.83 16.65 0.00 3.16
1035 1059 5.171476 ACATACACAGTACAAGCTAGCAAG 58.829 41.667 18.83 11.22 0.00 4.01
1036 1060 5.147330 ACATACACAGTACAAGCTAGCAA 57.853 39.130 18.83 0.00 0.00 3.91
1037 1061 4.801330 ACATACACAGTACAAGCTAGCA 57.199 40.909 18.83 0.00 0.00 3.49
1038 1062 5.869888 AGAAACATACACAGTACAAGCTAGC 59.130 40.000 6.62 6.62 0.00 3.42
1039 1063 6.183360 GCAGAAACATACACAGTACAAGCTAG 60.183 42.308 0.00 0.00 0.00 3.42
1040 1064 5.637810 GCAGAAACATACACAGTACAAGCTA 59.362 40.000 0.00 0.00 0.00 3.32
1041 1065 4.452455 GCAGAAACATACACAGTACAAGCT 59.548 41.667 0.00 0.00 0.00 3.74
1042 1066 4.213270 TGCAGAAACATACACAGTACAAGC 59.787 41.667 0.00 0.00 0.00 4.01
1043 1067 5.922739 TGCAGAAACATACACAGTACAAG 57.077 39.130 0.00 0.00 0.00 3.16
1044 1068 5.762711 ACATGCAGAAACATACACAGTACAA 59.237 36.000 0.00 0.00 0.00 2.41
1045 1069 5.304778 ACATGCAGAAACATACACAGTACA 58.695 37.500 0.00 0.00 0.00 2.90
1046 1070 5.862924 ACATGCAGAAACATACACAGTAC 57.137 39.130 0.00 0.00 0.00 2.73
1047 1071 6.667370 CAAACATGCAGAAACATACACAGTA 58.333 36.000 0.00 0.00 0.00 2.74
1048 1072 5.522456 CAAACATGCAGAAACATACACAGT 58.478 37.500 0.00 0.00 0.00 3.55
1049 1073 4.383649 GCAAACATGCAGAAACATACACAG 59.616 41.667 0.00 0.00 34.41 3.66
1050 1074 4.297510 GCAAACATGCAGAAACATACACA 58.702 39.130 0.00 0.00 34.41 3.72
1051 1075 3.674753 GGCAAACATGCAGAAACATACAC 59.325 43.478 2.97 0.00 36.33 2.90
1079 1103 4.207891 TCATTCCTCTAGGCAGACAAAC 57.792 45.455 0.00 0.00 34.44 2.93
1090 1115 7.310485 GGACAACTAAGAACCTTCATTCCTCTA 60.310 40.741 0.00 0.00 0.00 2.43
1097 1122 5.568620 AGTGGACAACTAAGAACCTTCAT 57.431 39.130 0.00 0.00 37.36 2.57
1098 1123 5.123227 CAAGTGGACAACTAAGAACCTTCA 58.877 41.667 0.00 0.00 38.56 3.02
1099 1124 5.123936 ACAAGTGGACAACTAAGAACCTTC 58.876 41.667 0.00 0.00 38.56 3.46
1100 1125 5.112129 ACAAGTGGACAACTAAGAACCTT 57.888 39.130 0.00 0.00 38.56 3.50
1101 1126 4.772886 ACAAGTGGACAACTAAGAACCT 57.227 40.909 0.00 0.00 38.56 3.50
1102 1127 5.608449 AGTACAAGTGGACAACTAAGAACC 58.392 41.667 0.00 0.00 38.56 3.62
1103 1128 6.537660 ACAAGTACAAGTGGACAACTAAGAAC 59.462 38.462 0.00 0.00 38.56 3.01
1104 1129 6.537301 CACAAGTACAAGTGGACAACTAAGAA 59.463 38.462 9.19 0.00 38.56 2.52
1105 1130 6.046593 CACAAGTACAAGTGGACAACTAAGA 58.953 40.000 9.19 0.00 38.56 2.10
1106 1131 5.815740 ACACAAGTACAAGTGGACAACTAAG 59.184 40.000 18.20 0.00 38.56 2.18
1107 1132 5.736813 ACACAAGTACAAGTGGACAACTAA 58.263 37.500 18.20 0.00 38.56 2.24
1108 1133 5.347620 ACACAAGTACAAGTGGACAACTA 57.652 39.130 18.20 0.00 38.56 2.24
1109 1134 4.216411 ACACAAGTACAAGTGGACAACT 57.784 40.909 18.20 0.00 42.60 3.16
1110 1135 4.957759 AACACAAGTACAAGTGGACAAC 57.042 40.909 18.20 0.00 39.99 3.32
1111 1136 4.156922 CCAAACACAAGTACAAGTGGACAA 59.843 41.667 18.20 0.00 39.99 3.18
1112 1137 3.692101 CCAAACACAAGTACAAGTGGACA 59.308 43.478 18.20 0.00 39.99 4.02
1113 1138 3.692593 ACCAAACACAAGTACAAGTGGAC 59.307 43.478 18.20 0.00 39.99 4.02
1114 1139 3.958018 ACCAAACACAAGTACAAGTGGA 58.042 40.909 18.20 0.00 39.99 4.02
1115 1140 4.420168 CAACCAAACACAAGTACAAGTGG 58.580 43.478 18.20 7.97 39.99 4.00
1116 1141 3.857093 GCAACCAAACACAAGTACAAGTG 59.143 43.478 14.02 14.02 41.40 3.16
1117 1142 3.508012 TGCAACCAAACACAAGTACAAGT 59.492 39.130 0.00 0.00 0.00 3.16
1118 1143 4.103365 TGCAACCAAACACAAGTACAAG 57.897 40.909 0.00 0.00 0.00 3.16
1122 1147 4.218635 TGTCTTTGCAACCAAACACAAGTA 59.781 37.500 0.00 0.00 37.06 2.24
1138 1163 3.397482 AGCACTAGCAGTTCTGTCTTTG 58.603 45.455 1.78 2.94 45.49 2.77
1146 1171 5.927115 ACAACTTAGTAAGCACTAGCAGTTC 59.073 40.000 9.92 0.00 45.49 3.01
1153 1178 6.208007 TGCTACTGACAACTTAGTAAGCACTA 59.792 38.462 9.92 0.00 36.14 2.74
1155 1180 5.227908 TGCTACTGACAACTTAGTAAGCAC 58.772 41.667 9.92 0.48 33.17 4.40
1156 1181 5.462530 TGCTACTGACAACTTAGTAAGCA 57.537 39.130 9.92 0.00 34.40 3.91
1157 1182 5.220491 GCATGCTACTGACAACTTAGTAAGC 60.220 44.000 11.37 0.00 0.00 3.09
1158 1183 6.102663 AGCATGCTACTGACAACTTAGTAAG 58.897 40.000 21.21 8.41 0.00 2.34
1159 1184 6.037786 AGCATGCTACTGACAACTTAGTAA 57.962 37.500 21.21 0.00 0.00 2.24
1163 1188 4.452114 CACAAGCATGCTACTGACAACTTA 59.548 41.667 23.00 0.00 0.00 2.24
1168 1193 2.549064 ACACAAGCATGCTACTGACA 57.451 45.000 23.00 0.00 0.00 3.58
1192 1217 5.712152 ACAATTCTGAAACAACATCCCTC 57.288 39.130 0.00 0.00 0.00 4.30
1201 1226 4.819088 TCGGTCATGAACAATTCTGAAACA 59.181 37.500 12.13 0.00 0.00 2.83
1203 1228 6.384258 TTTCGGTCATGAACAATTCTGAAA 57.616 33.333 12.13 10.97 0.00 2.69
1236 1287 7.905604 TTGACCTCAGTGATATAACAAGTTG 57.094 36.000 0.00 0.00 0.00 3.16
1241 1292 7.552687 GGTGATTTTGACCTCAGTGATATAACA 59.447 37.037 0.00 0.00 0.00 2.41
1243 1294 7.861629 AGGTGATTTTGACCTCAGTGATATAA 58.138 34.615 0.00 0.00 39.89 0.98
1246 1297 5.762179 AGGTGATTTTGACCTCAGTGATA 57.238 39.130 0.00 0.00 39.89 2.15
1247 1298 4.647564 AGGTGATTTTGACCTCAGTGAT 57.352 40.909 0.00 0.00 39.89 3.06
1255 1350 8.398665 GTTCATACTTATGAGGTGATTTTGACC 58.601 37.037 0.00 0.00 42.99 4.02
1256 1351 9.167311 AGTTCATACTTATGAGGTGATTTTGAC 57.833 33.333 0.00 0.00 42.99 3.18
1339 1475 5.348451 ACACACAAAACAATTCTGAAACAGC 59.652 36.000 0.00 0.00 0.00 4.40
1389 1526 3.004734 GCTTGCAAGGCTCTAAAGAACAA 59.995 43.478 27.10 0.00 0.00 2.83
1395 1532 3.191371 GCTTAAGCTTGCAAGGCTCTAAA 59.809 43.478 27.10 16.38 39.30 1.85
1396 1533 2.749621 GCTTAAGCTTGCAAGGCTCTAA 59.250 45.455 27.10 19.45 39.30 2.10
1397 1534 2.359900 GCTTAAGCTTGCAAGGCTCTA 58.640 47.619 27.10 15.00 39.30 2.43
1490 1627 3.322369 CATTGCCATCCGCGTACTTATA 58.678 45.455 4.92 0.00 42.08 0.98
1550 1687 1.534595 GGTTGCAATGCGTGATGGATC 60.535 52.381 0.59 0.00 0.00 3.36
1844 1981 1.162085 GGAGGATATCCCCAGCCCT 59.838 63.158 18.56 0.00 43.01 5.19
1937 2074 9.362151 TGAATAGGAAATTGTGTTACCTTTTCT 57.638 29.630 0.49 0.00 38.51 2.52
1997 2142 6.529220 CCCAAACAAAGTTCCCATTTCATAA 58.471 36.000 0.00 0.00 0.00 1.90
1998 2143 5.512232 GCCCAAACAAAGTTCCCATTTCATA 60.512 40.000 0.00 0.00 0.00 2.15
1999 2144 4.746395 GCCCAAACAAAGTTCCCATTTCAT 60.746 41.667 0.00 0.00 0.00 2.57
2027 2172 1.001181 TCCGTCGGGAAGTCGAAAATT 59.999 47.619 12.29 0.00 40.15 1.82
2030 2175 0.890542 TCTCCGTCGGGAAGTCGAAA 60.891 55.000 12.29 0.00 43.27 3.46
2186 2331 0.752009 CGATCCTCCCTTCCGTCAGA 60.752 60.000 0.00 0.00 0.00 3.27
2367 2512 2.098117 CCAAGCAATGAATTCCCTCGAC 59.902 50.000 2.27 0.00 0.00 4.20
2384 2529 3.058432 CACATTCTTGACTCAGCACCAAG 60.058 47.826 0.00 0.00 38.79 3.61
2390 2535 3.431572 GTCAGACACATTCTTGACTCAGC 59.568 47.826 0.00 0.00 33.23 4.26
2412 2566 3.255725 GCAACATGAACCATCCACAATG 58.744 45.455 0.00 0.00 34.93 2.82
2421 2575 1.876799 CGTAACCTGCAACATGAACCA 59.123 47.619 0.00 0.00 0.00 3.67
2516 2670 3.365291 GATGCCCGTGTAGACGCCA 62.365 63.158 6.94 6.67 44.68 5.69
2561 2715 3.243737 CGATCTGTATGGACCCGATGAAA 60.244 47.826 0.00 0.00 0.00 2.69
2674 2828 2.504163 AAGTCGGCTCTGCTCTGCTG 62.504 60.000 0.00 0.00 36.94 4.41
2678 2832 1.589113 GTCAAGTCGGCTCTGCTCT 59.411 57.895 0.00 0.00 0.00 4.09
2679 2833 1.446966 GGTCAAGTCGGCTCTGCTC 60.447 63.158 0.00 0.00 0.00 4.26
2680 2834 1.758440 TTGGTCAAGTCGGCTCTGCT 61.758 55.000 0.00 0.00 0.00 4.24
2681 2835 0.674895 ATTGGTCAAGTCGGCTCTGC 60.675 55.000 0.00 0.00 0.00 4.26
2682 2836 1.813513 AATTGGTCAAGTCGGCTCTG 58.186 50.000 0.00 0.00 0.00 3.35
2683 2837 2.354805 GGTAATTGGTCAAGTCGGCTCT 60.355 50.000 0.00 0.00 0.00 4.09
2693 2847 5.104151 TGCATAAGAGATGGGTAATTGGTCA 60.104 40.000 0.00 0.00 0.00 4.02
2727 2886 4.207224 CGTACATTCGGTCAAGTGATGATC 59.793 45.833 0.00 0.00 40.97 2.92
2735 2898 1.390123 CTGCACGTACATTCGGTCAAG 59.610 52.381 0.00 0.00 34.94 3.02
2747 2910 2.496070 AGTCCAGCTTAATCTGCACGTA 59.504 45.455 0.59 0.00 30.30 3.57
2749 2912 2.015736 AGTCCAGCTTAATCTGCACG 57.984 50.000 0.59 0.00 30.30 5.34
2920 3083 3.901797 GACCACCTTCCCCTGCGTG 62.902 68.421 0.00 0.00 0.00 5.34
3064 3227 3.587840 CCAGTCTTGGGGTTGGGA 58.412 61.111 0.00 0.00 41.05 4.37
3082 3245 1.776667 CCAGCCCTGGGATTATCAGAA 59.223 52.381 19.27 0.00 46.81 3.02
3168 3331 1.621301 CGCAAGAACACTCTCCTGCG 61.621 60.000 6.77 6.77 46.62 5.18
3213 3413 4.672587 ATAGCTCTGCCTTCGATACAAA 57.327 40.909 0.00 0.00 0.00 2.83
3254 3454 2.511600 CTGATCCCGGTTGCCGTC 60.512 66.667 0.00 0.00 46.80 4.79
3453 3666 1.648467 GGAAGTGGAATGCGCCTGTC 61.648 60.000 4.18 0.00 0.00 3.51
3456 3669 2.044946 GGGAAGTGGAATGCGCCT 60.045 61.111 4.18 0.00 0.00 5.52
3457 3670 3.140814 GGGGAAGTGGAATGCGCC 61.141 66.667 4.18 0.00 0.00 6.53
3458 3671 1.322538 ATTGGGGAAGTGGAATGCGC 61.323 55.000 0.00 0.00 0.00 6.09
3459 3672 1.135024 CAATTGGGGAAGTGGAATGCG 60.135 52.381 0.00 0.00 0.00 4.73
3460 3673 1.405933 GCAATTGGGGAAGTGGAATGC 60.406 52.381 7.72 0.00 0.00 3.56
3461 3674 1.135024 CGCAATTGGGGAAGTGGAATG 60.135 52.381 14.43 0.00 0.00 2.67
3462 3675 1.185315 CGCAATTGGGGAAGTGGAAT 58.815 50.000 14.43 0.00 0.00 3.01
3463 3676 0.111446 TCGCAATTGGGGAAGTGGAA 59.889 50.000 21.01 0.00 35.23 3.53
3464 3677 0.331278 ATCGCAATTGGGGAAGTGGA 59.669 50.000 21.01 1.70 42.27 4.02
3465 3678 1.949525 CTATCGCAATTGGGGAAGTGG 59.050 52.381 21.01 5.21 42.27 4.00
3466 3679 2.614057 GACTATCGCAATTGGGGAAGTG 59.386 50.000 24.78 13.91 42.27 3.16
3467 3680 2.505819 AGACTATCGCAATTGGGGAAGT 59.494 45.455 21.01 21.53 42.27 3.01
3468 3681 3.134458 GAGACTATCGCAATTGGGGAAG 58.866 50.000 21.01 18.97 42.27 3.46
3469 3682 2.483013 CGAGACTATCGCAATTGGGGAA 60.483 50.000 21.01 9.53 45.98 3.97
3470 3683 1.068588 CGAGACTATCGCAATTGGGGA 59.931 52.381 21.01 9.69 45.98 4.81
3471 3684 1.502231 CGAGACTATCGCAATTGGGG 58.498 55.000 21.01 8.87 45.98 4.96
3481 3694 4.271533 CGTGGCTATCCTATCGAGACTATC 59.728 50.000 0.00 0.00 0.00 2.08
3482 3695 4.193090 CGTGGCTATCCTATCGAGACTAT 58.807 47.826 0.00 0.00 0.00 2.12
3483 3696 3.597255 CGTGGCTATCCTATCGAGACTA 58.403 50.000 0.00 0.00 0.00 2.59
3484 3697 2.428491 CGTGGCTATCCTATCGAGACT 58.572 52.381 0.00 0.00 0.00 3.24
3485 3698 1.135632 GCGTGGCTATCCTATCGAGAC 60.136 57.143 0.00 0.00 0.00 3.36
3486 3699 1.166129 GCGTGGCTATCCTATCGAGA 58.834 55.000 0.00 0.00 0.00 4.04
3487 3700 1.131504 GAGCGTGGCTATCCTATCGAG 59.868 57.143 0.00 0.00 39.88 4.04
3488 3701 1.166129 GAGCGTGGCTATCCTATCGA 58.834 55.000 0.00 0.00 39.88 3.59
3489 3702 0.171455 GGAGCGTGGCTATCCTATCG 59.829 60.000 0.00 0.00 39.88 2.92
3490 3703 0.533032 GGGAGCGTGGCTATCCTATC 59.467 60.000 0.00 0.00 39.88 2.08
3491 3704 0.905337 GGGGAGCGTGGCTATCCTAT 60.905 60.000 8.65 0.00 39.88 2.57
3492 3705 1.533273 GGGGAGCGTGGCTATCCTA 60.533 63.158 8.65 0.00 39.88 2.94
3493 3706 2.844839 GGGGAGCGTGGCTATCCT 60.845 66.667 8.65 0.00 39.88 3.24
3494 3707 3.942439 GGGGGAGCGTGGCTATCC 61.942 72.222 0.00 0.00 39.88 2.59
3495 3708 4.301027 CGGGGGAGCGTGGCTATC 62.301 72.222 0.00 0.00 39.88 2.08
3586 3799 4.803426 GGAGCCTGCACCGACGAG 62.803 72.222 0.00 0.00 0.00 4.18
3600 3813 4.135153 CTGTCCAGCGGTCCGGAG 62.135 72.222 14.38 0.00 29.98 4.63
3610 3823 2.669569 CAACACGGGGCTGTCCAG 60.670 66.667 0.00 0.00 37.22 3.86
3611 3824 4.263572 CCAACACGGGGCTGTCCA 62.264 66.667 0.00 0.00 37.22 4.02
3639 3852 4.007644 TCTGGCACCAGCGACAGG 62.008 66.667 12.03 0.00 43.31 4.00
3640 3853 2.740055 GTCTGGCACCAGCGACAG 60.740 66.667 12.03 0.00 43.31 3.51
3641 3854 3.226429 GAGTCTGGCACCAGCGACA 62.226 63.158 12.03 0.00 43.31 4.35
3642 3855 2.433318 GAGTCTGGCACCAGCGAC 60.433 66.667 12.03 6.40 43.31 5.19
3643 3856 3.695606 GGAGTCTGGCACCAGCGA 61.696 66.667 12.03 0.00 43.31 4.93
3644 3857 4.767255 GGGAGTCTGGCACCAGCG 62.767 72.222 12.03 0.00 43.31 5.18
3645 3858 3.325753 AGGGAGTCTGGCACCAGC 61.326 66.667 12.03 7.33 43.31 4.85
3646 3859 2.667418 CAGGGAGTCTGGCACCAG 59.333 66.667 10.60 10.60 44.86 4.00
3653 3866 2.424474 CCGAGATCCAGGGAGTCTG 58.576 63.158 0.00 0.00 43.00 3.51
3660 3873 1.668294 CGAATCCCCGAGATCCAGG 59.332 63.158 0.00 0.00 32.47 4.45
3661 3874 1.668294 CCGAATCCCCGAGATCCAG 59.332 63.158 0.00 0.00 32.47 3.86
3662 3875 2.507854 GCCGAATCCCCGAGATCCA 61.508 63.158 0.00 0.00 32.47 3.41
3663 3876 2.344129 GCCGAATCCCCGAGATCC 59.656 66.667 0.00 0.00 32.47 3.36
3664 3877 2.161078 GAGGCCGAATCCCCGAGATC 62.161 65.000 0.00 0.00 32.47 2.75
3665 3878 2.122813 AGGCCGAATCCCCGAGAT 60.123 61.111 0.00 0.00 36.48 2.75
3666 3879 2.838225 GAGGCCGAATCCCCGAGA 60.838 66.667 0.00 0.00 0.00 4.04
3667 3880 3.930012 GGAGGCCGAATCCCCGAG 61.930 72.222 0.00 0.00 0.00 4.63
3672 3885 2.118233 GATCTGGGGAGGCCGAATCC 62.118 65.000 0.00 0.00 35.99 3.01
3673 3886 1.373059 GATCTGGGGAGGCCGAATC 59.627 63.158 0.00 0.00 0.00 2.52
3674 3887 2.150051 GGATCTGGGGAGGCCGAAT 61.150 63.158 0.00 0.00 0.00 3.34
3675 3888 2.768344 GGATCTGGGGAGGCCGAA 60.768 66.667 0.00 0.00 0.00 4.30
3679 3892 2.610532 GAAACCGGATCTGGGGAGGC 62.611 65.000 24.68 5.58 0.00 4.70
3680 3893 1.527370 GAAACCGGATCTGGGGAGG 59.473 63.158 24.68 6.02 0.00 4.30
3681 3894 1.271840 TGGAAACCGGATCTGGGGAG 61.272 60.000 24.68 0.00 0.00 4.30
3682 3895 1.229690 TGGAAACCGGATCTGGGGA 60.230 57.895 24.68 0.56 0.00 4.81
3683 3896 1.077716 GTGGAAACCGGATCTGGGG 60.078 63.158 24.68 10.62 0.00 4.96
3684 3897 1.449601 CGTGGAAACCGGATCTGGG 60.450 63.158 24.68 13.12 0.00 4.45
3685 3898 2.106683 GCGTGGAAACCGGATCTGG 61.107 63.158 19.66 19.66 0.00 3.86
3686 3899 2.106683 GGCGTGGAAACCGGATCTG 61.107 63.158 9.46 0.00 0.00 2.90
3687 3900 2.267961 GGCGTGGAAACCGGATCT 59.732 61.111 9.46 0.00 0.00 2.75
3688 3901 3.192922 CGGCGTGGAAACCGGATC 61.193 66.667 9.46 5.87 45.74 3.36
3711 3924 1.513586 GCATTCAACTCGCAGCAGC 60.514 57.895 0.00 0.00 37.42 5.25
3712 3925 1.136147 GGCATTCAACTCGCAGCAG 59.864 57.895 0.00 0.00 0.00 4.24
3713 3926 2.334946 GGGCATTCAACTCGCAGCA 61.335 57.895 0.00 0.00 0.00 4.41
3714 3927 2.486966 GGGCATTCAACTCGCAGC 59.513 61.111 0.00 0.00 0.00 5.25
3715 3928 2.409870 GGGGGCATTCAACTCGCAG 61.410 63.158 0.00 0.00 0.00 5.18
3716 3929 2.361104 GGGGGCATTCAACTCGCA 60.361 61.111 0.00 0.00 0.00 5.10
4074 4287 1.528776 GGGCTAGAGACCGTCGGAT 60.529 63.158 20.51 5.79 30.66 4.18
4075 4288 2.124403 GGGCTAGAGACCGTCGGA 60.124 66.667 20.51 0.00 30.66 4.55
4081 4294 2.768769 GGGGGTGGGCTAGAGACC 60.769 72.222 0.00 0.00 45.93 3.85
4082 4295 2.066999 CAGGGGGTGGGCTAGAGAC 61.067 68.421 0.00 0.00 0.00 3.36
4083 4296 2.368594 CAGGGGGTGGGCTAGAGA 59.631 66.667 0.00 0.00 0.00 3.10
4084 4297 3.483869 GCAGGGGGTGGGCTAGAG 61.484 72.222 0.00 0.00 0.00 2.43
4085 4298 4.024984 AGCAGGGGGTGGGCTAGA 62.025 66.667 0.00 0.00 35.82 2.43
4086 4299 3.483869 GAGCAGGGGGTGGGCTAG 61.484 72.222 0.00 0.00 38.15 3.42
4090 4303 4.181010 CATCGAGCAGGGGGTGGG 62.181 72.222 0.00 0.00 0.00 4.61
4091 4304 4.864334 GCATCGAGCAGGGGGTGG 62.864 72.222 0.00 0.00 44.79 4.61
4100 4313 2.894387 GGACTGCAGGCATCGAGC 60.894 66.667 23.90 0.00 44.65 5.03
4101 4314 0.879400 GATGGACTGCAGGCATCGAG 60.879 60.000 23.90 0.00 0.00 4.04
4102 4315 1.144716 GATGGACTGCAGGCATCGA 59.855 57.895 23.90 5.90 0.00 3.59
4103 4316 0.534427 ATGATGGACTGCAGGCATCG 60.534 55.000 23.90 0.00 0.00 3.84
4104 4317 1.236628 GATGATGGACTGCAGGCATC 58.763 55.000 23.90 21.07 0.00 3.91
4105 4318 0.534427 CGATGATGGACTGCAGGCAT 60.534 55.000 23.90 13.12 0.00 4.40
4106 4319 1.153309 CGATGATGGACTGCAGGCA 60.153 57.895 23.90 8.14 0.00 4.75
4107 4320 1.153289 ACGATGATGGACTGCAGGC 60.153 57.895 19.93 16.59 0.00 4.85
4108 4321 0.873312 CGACGATGATGGACTGCAGG 60.873 60.000 19.93 0.00 0.00 4.85
4109 4322 1.485838 GCGACGATGATGGACTGCAG 61.486 60.000 13.48 13.48 0.00 4.41
4110 4323 1.519234 GCGACGATGATGGACTGCA 60.519 57.895 0.00 0.00 0.00 4.41
4111 4324 2.580470 CGCGACGATGATGGACTGC 61.580 63.158 0.00 0.00 0.00 4.40
4112 4325 2.580470 GCGCGACGATGATGGACTG 61.580 63.158 12.10 0.00 0.00 3.51
4113 4326 2.278857 GCGCGACGATGATGGACT 60.279 61.111 12.10 0.00 0.00 3.85
4114 4327 3.330853 GGCGCGACGATGATGGAC 61.331 66.667 12.10 0.00 0.00 4.02
4115 4328 4.585526 GGGCGCGACGATGATGGA 62.586 66.667 12.10 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.