Multiple sequence alignment - TraesCS3B01G327700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G327700 chr3B 100.000 1469 0 0 1 1469 528426539 528425071 0.000000e+00 2713.0
1 TraesCS3B01G327700 chr3B 100.000 439 0 0 1817 2255 528424723 528424285 0.000000e+00 811.0
2 TraesCS3B01G327700 chr3B 80.303 264 28 8 996 1256 528493121 528492879 6.400000e-41 178.0
3 TraesCS3B01G327700 chr3B 92.188 64 5 0 120 183 545410164 545410101 8.580000e-15 91.6
4 TraesCS3B01G327700 chr3A 92.451 1179 40 22 335 1469 523609911 523608738 0.000000e+00 1639.0
5 TraesCS3B01G327700 chr3D 90.700 1172 62 17 335 1469 402748234 402747073 0.000000e+00 1517.0
6 TraesCS3B01G327700 chr3D 83.645 214 25 6 127 331 178589233 178589445 2.290000e-45 193.0
7 TraesCS3B01G327700 chr3D 96.970 33 1 0 1855 1887 288664768 288664800 3.130000e-04 56.5
8 TraesCS3B01G327700 chr1B 100.000 439 0 0 1817 2255 296076369 296076807 0.000000e+00 811.0
9 TraesCS3B01G327700 chr1B 100.000 439 0 0 1817 2255 338849412 338848974 0.000000e+00 811.0
10 TraesCS3B01G327700 chr6A 99.772 439 1 0 1817 2255 263594033 263594471 0.000000e+00 806.0
11 TraesCS3B01G327700 chr2B 99.772 439 1 0 1817 2255 764157414 764156976 0.000000e+00 806.0
12 TraesCS3B01G327700 chr2B 94.040 151 7 2 181 329 361634793 361634643 6.270000e-56 228.0
13 TraesCS3B01G327700 chr2B 96.491 57 2 0 127 183 30981434 30981378 6.630000e-16 95.3
14 TraesCS3B01G327700 chr5B 99.545 440 1 1 1817 2255 643420582 643421021 0.000000e+00 800.0
15 TraesCS3B01G327700 chr5B 93.038 158 7 2 181 334 710348405 710348248 6.270000e-56 228.0
16 TraesCS3B01G327700 chr1A 99.544 439 2 0 1817 2255 463394768 463394330 0.000000e+00 800.0
17 TraesCS3B01G327700 chr1A 93.548 155 4 3 181 329 58346667 58346821 2.250000e-55 226.0
18 TraesCS3B01G327700 chr6B 99.091 440 3 1 1817 2255 528110492 528110053 0.000000e+00 789.0
19 TraesCS3B01G327700 chr6B 93.126 451 18 5 1817 2255 164788608 164789057 0.000000e+00 649.0
20 TraesCS3B01G327700 chr5A 86.730 211 20 5 127 329 417330367 417330577 6.270000e-56 228.0
21 TraesCS3B01G327700 chr5A 93.506 154 4 3 182 329 280979780 280979933 8.110000e-55 224.0
22 TraesCS3B01G327700 chr2A 86.385 213 24 4 127 334 649006801 649006589 6.270000e-56 228.0
23 TraesCS3B01G327700 chr4B 86.667 210 20 5 127 329 658029972 658029764 2.250000e-55 226.0
24 TraesCS3B01G327700 chr7B 85.849 212 21 5 127 329 541718603 541718392 1.360000e-52 217.0
25 TraesCS3B01G327700 chr4D 96.491 57 2 0 125 181 226385251 226385195 6.630000e-16 95.3
26 TraesCS3B01G327700 chr2D 92.308 65 5 0 119 183 521565050 521564986 2.380000e-15 93.5
27 TraesCS3B01G327700 chr2D 96.970 33 1 0 1855 1887 419057284 419057316 3.130000e-04 56.5
28 TraesCS3B01G327700 chr7D 100.000 30 0 0 1858 1887 262137474 262137445 3.130000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G327700 chr3B 528424285 528426539 2254 True 1762 2713 100.000 1 2255 2 chr3B.!!$R3 2254
1 TraesCS3B01G327700 chr3A 523608738 523609911 1173 True 1639 1639 92.451 335 1469 1 chr3A.!!$R1 1134
2 TraesCS3B01G327700 chr3D 402747073 402748234 1161 True 1517 1517 90.700 335 1469 1 chr3D.!!$R1 1134

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
787 806 0.040514 TGCACACAAAAAGCGATCGG 60.041 50.0 18.3 0.82 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2219 2280 0.10741 TGTCGCAGTGGACTTGGTTT 60.107 50.0 11.48 0.0 37.81 3.27 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 9.958180 TTGAGAAATTAATGAAGGAGTGATACA 57.042 29.630 0.00 0.00 0.00 2.29
31 32 9.605275 TGAGAAATTAATGAAGGAGTGATACAG 57.395 33.333 0.00 0.00 0.00 2.74
32 33 9.606631 GAGAAATTAATGAAGGAGTGATACAGT 57.393 33.333 0.00 0.00 0.00 3.55
33 34 9.606631 AGAAATTAATGAAGGAGTGATACAGTC 57.393 33.333 0.00 0.00 33.45 3.51
47 48 9.817809 GAGTGATACAGTCCATAATTGTCTTAA 57.182 33.333 0.00 0.00 0.00 1.85
48 49 9.601217 AGTGATACAGTCCATAATTGTCTTAAC 57.399 33.333 0.00 0.00 0.00 2.01
49 50 8.827677 GTGATACAGTCCATAATTGTCTTAACC 58.172 37.037 0.00 0.00 0.00 2.85
50 51 8.768397 TGATACAGTCCATAATTGTCTTAACCT 58.232 33.333 0.00 0.00 0.00 3.50
51 52 9.614792 GATACAGTCCATAATTGTCTTAACCTT 57.385 33.333 0.00 0.00 0.00 3.50
52 53 9.975218 ATACAGTCCATAATTGTCTTAACCTTT 57.025 29.630 0.00 0.00 0.00 3.11
53 54 8.706322 ACAGTCCATAATTGTCTTAACCTTTT 57.294 30.769 0.00 0.00 0.00 2.27
54 55 9.143155 ACAGTCCATAATTGTCTTAACCTTTTT 57.857 29.630 0.00 0.00 0.00 1.94
76 77 5.677319 TTTTCATACACTACAGCTAGCCT 57.323 39.130 12.13 0.00 0.00 4.58
77 78 5.677319 TTTCATACACTACAGCTAGCCTT 57.323 39.130 12.13 0.25 0.00 4.35
78 79 4.920640 TCATACACTACAGCTAGCCTTC 57.079 45.455 12.13 0.00 0.00 3.46
79 80 4.537751 TCATACACTACAGCTAGCCTTCT 58.462 43.478 12.13 0.00 0.00 2.85
80 81 4.580995 TCATACACTACAGCTAGCCTTCTC 59.419 45.833 12.13 0.00 0.00 2.87
81 82 2.808919 ACACTACAGCTAGCCTTCTCA 58.191 47.619 12.13 0.00 0.00 3.27
82 83 2.494073 ACACTACAGCTAGCCTTCTCAC 59.506 50.000 12.13 0.00 0.00 3.51
83 84 2.757868 CACTACAGCTAGCCTTCTCACT 59.242 50.000 12.13 0.00 0.00 3.41
84 85 3.948473 CACTACAGCTAGCCTTCTCACTA 59.052 47.826 12.13 0.00 0.00 2.74
85 86 4.399618 CACTACAGCTAGCCTTCTCACTAA 59.600 45.833 12.13 0.00 0.00 2.24
86 87 4.642885 ACTACAGCTAGCCTTCTCACTAAG 59.357 45.833 12.13 0.00 0.00 2.18
87 88 3.436243 ACAGCTAGCCTTCTCACTAAGT 58.564 45.455 12.13 0.00 0.00 2.24
88 89 3.194542 ACAGCTAGCCTTCTCACTAAGTG 59.805 47.826 12.13 0.32 34.45 3.16
89 90 3.445450 CAGCTAGCCTTCTCACTAAGTGA 59.555 47.826 12.13 0.00 40.50 3.41
90 91 4.081972 CAGCTAGCCTTCTCACTAAGTGAA 60.082 45.833 12.13 0.00 42.26 3.18
91 92 4.528596 AGCTAGCCTTCTCACTAAGTGAAA 59.471 41.667 12.13 0.00 42.26 2.69
92 93 4.627900 GCTAGCCTTCTCACTAAGTGAAAC 59.372 45.833 2.29 0.00 42.26 2.78
111 112 8.723942 GTGAAACTGAGAACTATGGTCAATAT 57.276 34.615 0.00 0.00 0.00 1.28
112 113 9.167311 GTGAAACTGAGAACTATGGTCAATATT 57.833 33.333 0.00 0.00 0.00 1.28
116 117 9.823647 AACTGAGAACTATGGTCAATATTACAG 57.176 33.333 0.00 0.00 0.00 2.74
117 118 8.424918 ACTGAGAACTATGGTCAATATTACAGG 58.575 37.037 0.00 0.00 0.00 4.00
118 119 8.547481 TGAGAACTATGGTCAATATTACAGGA 57.453 34.615 0.00 0.00 0.00 3.86
119 120 8.988060 TGAGAACTATGGTCAATATTACAGGAA 58.012 33.333 0.00 0.00 0.00 3.36
120 121 9.832445 GAGAACTATGGTCAATATTACAGGAAA 57.168 33.333 0.00 0.00 0.00 3.13
121 122 9.838339 AGAACTATGGTCAATATTACAGGAAAG 57.162 33.333 0.00 0.00 0.00 2.62
122 123 8.980481 AACTATGGTCAATATTACAGGAAAGG 57.020 34.615 0.00 0.00 0.00 3.11
123 124 8.331931 ACTATGGTCAATATTACAGGAAAGGA 57.668 34.615 0.00 0.00 0.00 3.36
124 125 8.432805 ACTATGGTCAATATTACAGGAAAGGAG 58.567 37.037 0.00 0.00 0.00 3.69
125 126 6.636454 TGGTCAATATTACAGGAAAGGAGT 57.364 37.500 0.00 0.00 0.00 3.85
126 127 6.414732 TGGTCAATATTACAGGAAAGGAGTG 58.585 40.000 0.00 0.00 0.00 3.51
127 128 6.214615 TGGTCAATATTACAGGAAAGGAGTGA 59.785 38.462 0.00 0.00 0.00 3.41
128 129 7.110155 GGTCAATATTACAGGAAAGGAGTGAA 58.890 38.462 0.00 0.00 0.00 3.18
129 130 7.065923 GGTCAATATTACAGGAAAGGAGTGAAC 59.934 40.741 0.00 0.00 0.00 3.18
130 131 7.065923 GTCAATATTACAGGAAAGGAGTGAACC 59.934 40.741 0.00 0.00 0.00 3.62
131 132 4.993705 ATTACAGGAAAGGAGTGAACCA 57.006 40.909 0.00 0.00 0.00 3.67
132 133 4.781775 TTACAGGAAAGGAGTGAACCAA 57.218 40.909 0.00 0.00 0.00 3.67
133 134 2.932261 ACAGGAAAGGAGTGAACCAAC 58.068 47.619 0.00 0.00 0.00 3.77
134 135 2.230660 CAGGAAAGGAGTGAACCAACC 58.769 52.381 0.00 0.00 0.00 3.77
135 136 2.136026 AGGAAAGGAGTGAACCAACCT 58.864 47.619 0.00 0.00 0.00 3.50
136 137 2.158608 AGGAAAGGAGTGAACCAACCTG 60.159 50.000 0.00 0.00 32.73 4.00
137 138 2.422945 GGAAAGGAGTGAACCAACCTGT 60.423 50.000 0.00 0.00 32.73 4.00
138 139 2.348411 AAGGAGTGAACCAACCTGTG 57.652 50.000 0.00 0.00 32.73 3.66
151 152 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
152 153 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
153 154 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
154 155 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
155 156 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
156 157 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
157 158 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
158 159 1.913419 GGTTGGATGGTTAGAGGGACA 59.087 52.381 0.00 0.00 0.00 4.02
159 160 2.355818 GGTTGGATGGTTAGAGGGACAC 60.356 54.545 0.00 0.00 0.00 3.67
160 161 2.572104 GTTGGATGGTTAGAGGGACACT 59.428 50.000 0.00 0.00 0.00 3.55
161 162 2.187958 TGGATGGTTAGAGGGACACTG 58.812 52.381 0.00 0.00 0.00 3.66
162 163 1.486726 GGATGGTTAGAGGGACACTGG 59.513 57.143 0.00 0.00 0.00 4.00
163 164 2.188817 GATGGTTAGAGGGACACTGGT 58.811 52.381 0.00 0.00 0.00 4.00
164 165 3.371965 GATGGTTAGAGGGACACTGGTA 58.628 50.000 0.00 0.00 0.00 3.25
165 166 3.484953 TGGTTAGAGGGACACTGGTAT 57.515 47.619 0.00 0.00 0.00 2.73
166 167 3.371965 TGGTTAGAGGGACACTGGTATC 58.628 50.000 0.00 0.00 0.00 2.24
167 168 2.699321 GGTTAGAGGGACACTGGTATCC 59.301 54.545 0.00 0.00 0.00 2.59
177 178 4.538262 TGGTATCCCCAGCCCATT 57.462 55.556 0.00 0.00 38.72 3.16
178 179 3.685067 TGGTATCCCCAGCCCATTA 57.315 52.632 0.00 0.00 38.72 1.90
179 180 1.444933 TGGTATCCCCAGCCCATTAG 58.555 55.000 0.00 0.00 38.72 1.73
180 181 0.698818 GGTATCCCCAGCCCATTAGG 59.301 60.000 0.00 0.00 39.47 2.69
181 182 1.742308 GTATCCCCAGCCCATTAGGA 58.258 55.000 0.00 0.00 38.24 2.94
182 183 2.279173 GTATCCCCAGCCCATTAGGAT 58.721 52.381 0.00 0.00 40.43 3.24
187 188 3.244616 AGCCCATTAGGATGCGCT 58.755 55.556 9.73 0.00 41.39 5.92
188 189 1.533711 AGCCCATTAGGATGCGCTT 59.466 52.632 9.73 0.55 43.12 4.68
189 190 0.106519 AGCCCATTAGGATGCGCTTT 60.107 50.000 9.73 0.00 43.12 3.51
190 191 0.312102 GCCCATTAGGATGCGCTTTC 59.688 55.000 9.73 0.00 38.24 2.62
191 192 1.679139 CCCATTAGGATGCGCTTTCA 58.321 50.000 9.73 0.00 38.24 2.69
192 193 1.605710 CCCATTAGGATGCGCTTTCAG 59.394 52.381 9.73 0.00 38.24 3.02
193 194 2.292267 CCATTAGGATGCGCTTTCAGT 58.708 47.619 9.73 0.00 36.89 3.41
194 195 2.032550 CCATTAGGATGCGCTTTCAGTG 59.967 50.000 9.73 1.55 36.89 3.66
195 196 1.737838 TTAGGATGCGCTTTCAGTGG 58.262 50.000 9.73 0.00 0.00 4.00
196 197 0.107703 TAGGATGCGCTTTCAGTGGG 60.108 55.000 9.73 0.00 0.00 4.61
197 198 1.377202 GGATGCGCTTTCAGTGGGA 60.377 57.895 9.73 0.00 0.00 4.37
198 199 1.372087 GGATGCGCTTTCAGTGGGAG 61.372 60.000 9.73 0.00 0.00 4.30
199 200 1.372087 GATGCGCTTTCAGTGGGAGG 61.372 60.000 9.73 0.00 0.00 4.30
200 201 1.841302 ATGCGCTTTCAGTGGGAGGA 61.841 55.000 9.73 0.00 0.00 3.71
201 202 1.743252 GCGCTTTCAGTGGGAGGAG 60.743 63.158 0.00 0.00 0.00 3.69
202 203 1.975327 CGCTTTCAGTGGGAGGAGA 59.025 57.895 0.00 0.00 0.00 3.71
203 204 0.390472 CGCTTTCAGTGGGAGGAGAC 60.390 60.000 0.00 0.00 0.00 3.36
204 205 0.390472 GCTTTCAGTGGGAGGAGACG 60.390 60.000 0.00 0.00 0.00 4.18
205 206 0.969894 CTTTCAGTGGGAGGAGACGT 59.030 55.000 0.00 0.00 0.00 4.34
206 207 1.344763 CTTTCAGTGGGAGGAGACGTT 59.655 52.381 0.00 0.00 0.00 3.99
207 208 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
230 231 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
233 234 4.849329 GACGAGGCGCCTACGGTG 62.849 72.222 34.97 23.88 40.57 4.94
235 236 4.849329 CGAGGCGCCTACGGTGAC 62.849 72.222 32.97 14.51 42.50 3.67
238 239 2.508663 GGCGCCTACGGTGACTTC 60.509 66.667 22.15 0.00 38.38 3.01
239 240 2.879462 GCGCCTACGGTGACTTCG 60.879 66.667 0.00 0.00 40.57 3.79
240 241 2.564975 CGCCTACGGTGACTTCGT 59.435 61.111 0.00 0.00 43.64 3.85
241 242 1.796151 CGCCTACGGTGACTTCGTA 59.204 57.895 0.00 0.00 41.38 3.43
242 243 0.168788 CGCCTACGGTGACTTCGTAA 59.831 55.000 0.00 0.00 41.62 3.18
243 244 1.401409 CGCCTACGGTGACTTCGTAAA 60.401 52.381 0.00 0.00 41.62 2.01
244 245 2.733227 CGCCTACGGTGACTTCGTAAAT 60.733 50.000 0.00 0.00 41.62 1.40
245 246 2.856557 GCCTACGGTGACTTCGTAAATC 59.143 50.000 0.00 0.00 41.62 2.17
246 247 3.428589 GCCTACGGTGACTTCGTAAATCT 60.429 47.826 0.00 0.00 41.62 2.40
247 248 4.741342 CCTACGGTGACTTCGTAAATCTT 58.259 43.478 0.00 0.00 41.62 2.40
248 249 5.677091 GCCTACGGTGACTTCGTAAATCTTA 60.677 44.000 0.00 0.00 41.62 2.10
249 250 6.324819 CCTACGGTGACTTCGTAAATCTTAA 58.675 40.000 0.00 0.00 41.62 1.85
250 251 6.471519 CCTACGGTGACTTCGTAAATCTTAAG 59.528 42.308 0.00 0.00 41.62 1.85
251 252 6.017400 ACGGTGACTTCGTAAATCTTAAGA 57.983 37.500 7.82 7.82 39.22 2.10
252 253 6.628185 ACGGTGACTTCGTAAATCTTAAGAT 58.372 36.000 12.37 12.37 39.22 2.40
253 254 6.530534 ACGGTGACTTCGTAAATCTTAAGATG 59.469 38.462 18.61 6.47 39.22 2.90
254 255 6.750501 CGGTGACTTCGTAAATCTTAAGATGA 59.249 38.462 18.61 8.72 34.49 2.92
255 256 7.435488 CGGTGACTTCGTAAATCTTAAGATGAT 59.565 37.037 18.61 12.88 34.49 2.45
256 257 9.745880 GGTGACTTCGTAAATCTTAAGATGATA 57.254 33.333 18.61 11.94 34.49 2.15
260 261 9.209175 ACTTCGTAAATCTTAAGATGATATGCC 57.791 33.333 18.61 3.91 34.49 4.40
261 262 7.812309 TCGTAAATCTTAAGATGATATGCCG 57.188 36.000 18.61 13.49 34.49 5.69
262 263 6.811665 TCGTAAATCTTAAGATGATATGCCGG 59.188 38.462 18.61 0.00 34.49 6.13
263 264 5.886960 AAATCTTAAGATGATATGCCGGC 57.113 39.130 22.73 22.73 34.49 6.13
264 265 4.833478 ATCTTAAGATGATATGCCGGCT 57.167 40.909 29.70 15.76 32.68 5.52
265 266 4.193826 TCTTAAGATGATATGCCGGCTC 57.806 45.455 29.70 17.89 0.00 4.70
266 267 3.578282 TCTTAAGATGATATGCCGGCTCA 59.422 43.478 29.70 23.34 0.00 4.26
267 268 2.469274 AAGATGATATGCCGGCTCAG 57.531 50.000 29.70 0.00 0.00 3.35
268 269 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
269 270 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
270 271 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
271 272 0.676184 TGATATGCCGGCTCAGTCTC 59.324 55.000 29.70 15.31 0.00 3.36
272 273 0.965439 GATATGCCGGCTCAGTCTCT 59.035 55.000 29.70 3.16 0.00 3.10
273 274 0.965439 ATATGCCGGCTCAGTCTCTC 59.035 55.000 29.70 0.00 0.00 3.20
274 275 1.448119 TATGCCGGCTCAGTCTCTCG 61.448 60.000 29.70 0.00 0.00 4.04
275 276 3.134792 GCCGGCTCAGTCTCTCGA 61.135 66.667 22.15 0.00 0.00 4.04
276 277 2.701780 GCCGGCTCAGTCTCTCGAA 61.702 63.158 22.15 0.00 0.00 3.71
277 278 1.431440 CCGGCTCAGTCTCTCGAAG 59.569 63.158 0.00 0.00 0.00 3.79
278 279 1.431440 CGGCTCAGTCTCTCGAAGG 59.569 63.158 0.00 0.00 0.00 3.46
279 280 1.309499 CGGCTCAGTCTCTCGAAGGT 61.309 60.000 0.00 0.00 0.00 3.50
280 281 0.172352 GGCTCAGTCTCTCGAAGGTG 59.828 60.000 0.00 0.00 0.00 4.00
281 282 0.457681 GCTCAGTCTCTCGAAGGTGC 60.458 60.000 0.00 0.00 0.00 5.01
282 283 1.173043 CTCAGTCTCTCGAAGGTGCT 58.827 55.000 0.00 0.00 0.00 4.40
283 284 1.132262 CTCAGTCTCTCGAAGGTGCTC 59.868 57.143 0.00 0.00 0.00 4.26
284 285 0.884514 CAGTCTCTCGAAGGTGCTCA 59.115 55.000 0.00 0.00 0.00 4.26
285 286 1.476085 CAGTCTCTCGAAGGTGCTCAT 59.524 52.381 0.00 0.00 0.00 2.90
286 287 2.685388 CAGTCTCTCGAAGGTGCTCATA 59.315 50.000 0.00 0.00 0.00 2.15
287 288 3.129462 CAGTCTCTCGAAGGTGCTCATAA 59.871 47.826 0.00 0.00 0.00 1.90
288 289 3.380004 AGTCTCTCGAAGGTGCTCATAAG 59.620 47.826 0.00 0.00 0.00 1.73
289 290 2.690497 TCTCTCGAAGGTGCTCATAAGG 59.310 50.000 0.00 0.00 0.00 2.69
290 291 2.690497 CTCTCGAAGGTGCTCATAAGGA 59.310 50.000 0.00 0.00 0.00 3.36
291 292 3.300388 TCTCGAAGGTGCTCATAAGGAT 58.700 45.455 0.00 0.00 0.00 3.24
292 293 4.470602 TCTCGAAGGTGCTCATAAGGATA 58.529 43.478 0.00 0.00 0.00 2.59
293 294 4.520874 TCTCGAAGGTGCTCATAAGGATAG 59.479 45.833 0.00 0.00 0.00 2.08
294 295 3.574396 TCGAAGGTGCTCATAAGGATAGG 59.426 47.826 0.00 0.00 0.00 2.57
295 296 3.574396 CGAAGGTGCTCATAAGGATAGGA 59.426 47.826 0.00 0.00 0.00 2.94
296 297 4.221703 CGAAGGTGCTCATAAGGATAGGAT 59.778 45.833 0.00 0.00 0.00 3.24
297 298 5.486526 GAAGGTGCTCATAAGGATAGGATG 58.513 45.833 0.00 0.00 0.00 3.51
298 299 4.497516 AGGTGCTCATAAGGATAGGATGT 58.502 43.478 0.00 0.00 0.00 3.06
299 300 4.285517 AGGTGCTCATAAGGATAGGATGTG 59.714 45.833 0.00 0.00 0.00 3.21
300 301 4.040952 GGTGCTCATAAGGATAGGATGTGT 59.959 45.833 0.00 0.00 0.00 3.72
301 302 4.993584 GTGCTCATAAGGATAGGATGTGTG 59.006 45.833 0.00 0.00 0.00 3.82
302 303 4.655649 TGCTCATAAGGATAGGATGTGTGT 59.344 41.667 0.00 0.00 0.00 3.72
303 304 4.993584 GCTCATAAGGATAGGATGTGTGTG 59.006 45.833 0.00 0.00 0.00 3.82
304 305 5.453903 GCTCATAAGGATAGGATGTGTGTGT 60.454 44.000 0.00 0.00 0.00 3.72
305 306 6.560003 TCATAAGGATAGGATGTGTGTGTT 57.440 37.500 0.00 0.00 0.00 3.32
306 307 6.957631 TCATAAGGATAGGATGTGTGTGTTT 58.042 36.000 0.00 0.00 0.00 2.83
307 308 8.084985 TCATAAGGATAGGATGTGTGTGTTTA 57.915 34.615 0.00 0.00 0.00 2.01
308 309 8.713971 TCATAAGGATAGGATGTGTGTGTTTAT 58.286 33.333 0.00 0.00 0.00 1.40
309 310 9.996554 CATAAGGATAGGATGTGTGTGTTTATA 57.003 33.333 0.00 0.00 0.00 0.98
311 312 7.067496 AGGATAGGATGTGTGTGTTTATAGG 57.933 40.000 0.00 0.00 0.00 2.57
312 313 6.844388 AGGATAGGATGTGTGTGTTTATAGGA 59.156 38.462 0.00 0.00 0.00 2.94
313 314 7.347222 AGGATAGGATGTGTGTGTTTATAGGAA 59.653 37.037 0.00 0.00 0.00 3.36
314 315 8.157476 GGATAGGATGTGTGTGTTTATAGGAAT 58.843 37.037 0.00 0.00 0.00 3.01
315 316 8.908786 ATAGGATGTGTGTGTTTATAGGAATG 57.091 34.615 0.00 0.00 0.00 2.67
316 317 6.957631 AGGATGTGTGTGTTTATAGGAATGA 58.042 36.000 0.00 0.00 0.00 2.57
317 318 7.050377 AGGATGTGTGTGTTTATAGGAATGAG 58.950 38.462 0.00 0.00 0.00 2.90
318 319 6.823689 GGATGTGTGTGTTTATAGGAATGAGT 59.176 38.462 0.00 0.00 0.00 3.41
319 320 7.201644 GGATGTGTGTGTTTATAGGAATGAGTG 60.202 40.741 0.00 0.00 0.00 3.51
320 321 6.530120 TGTGTGTGTTTATAGGAATGAGTGT 58.470 36.000 0.00 0.00 0.00 3.55
321 322 7.672240 TGTGTGTGTTTATAGGAATGAGTGTA 58.328 34.615 0.00 0.00 0.00 2.90
322 323 8.318412 TGTGTGTGTTTATAGGAATGAGTGTAT 58.682 33.333 0.00 0.00 0.00 2.29
323 324 8.604035 GTGTGTGTTTATAGGAATGAGTGTATG 58.396 37.037 0.00 0.00 0.00 2.39
324 325 7.279981 TGTGTGTTTATAGGAATGAGTGTATGC 59.720 37.037 0.00 0.00 0.00 3.14
325 326 6.478673 TGTGTTTATAGGAATGAGTGTATGCG 59.521 38.462 0.00 0.00 0.00 4.73
326 327 5.465390 TGTTTATAGGAATGAGTGTATGCGC 59.535 40.000 0.00 0.00 0.00 6.09
327 328 2.134201 TAGGAATGAGTGTATGCGCG 57.866 50.000 0.00 0.00 0.00 6.86
328 329 0.175760 AGGAATGAGTGTATGCGCGT 59.824 50.000 8.43 7.55 0.00 6.01
329 330 1.407618 AGGAATGAGTGTATGCGCGTA 59.592 47.619 8.43 4.92 0.00 4.42
330 331 2.035961 AGGAATGAGTGTATGCGCGTAT 59.964 45.455 15.52 15.52 0.00 3.06
331 332 2.155732 GGAATGAGTGTATGCGCGTATG 59.844 50.000 20.45 0.00 0.00 2.39
332 333 2.509052 ATGAGTGTATGCGCGTATGT 57.491 45.000 20.45 0.00 0.00 2.29
333 334 3.636282 ATGAGTGTATGCGCGTATGTA 57.364 42.857 20.45 5.53 0.00 2.29
379 380 1.021202 ATTAGCCGCGCTATGCAAAA 58.979 45.000 5.56 4.92 46.97 2.44
425 434 1.667830 CACGGCGAGACCACATTGT 60.668 57.895 16.62 0.00 39.03 2.71
456 465 1.983691 CCTCCATCTATCCATGTGCCT 59.016 52.381 0.00 0.00 0.00 4.75
499 508 0.168128 GTTCTGGGCACAATGTACGC 59.832 55.000 0.00 0.00 0.00 4.42
520 529 4.838486 CTCACGACGAGAGCGGCC 62.838 72.222 9.36 0.00 44.63 6.13
538 547 1.071471 CGTGGTGGCATATCCCTCC 59.929 63.158 0.00 0.00 38.68 4.30
668 677 6.267496 ACGCTAGTTAATGCAAAAAGGAAT 57.733 33.333 0.00 0.00 0.00 3.01
787 806 0.040514 TGCACACAAAAAGCGATCGG 60.041 50.000 18.30 0.82 0.00 4.18
789 808 1.950472 CACACAAAAAGCGATCGGTC 58.050 50.000 21.51 1.95 0.00 4.79
832 852 3.152400 CCCCGGGTCCCGTTCTAG 61.152 72.222 28.39 12.76 46.80 2.43
912 934 3.393089 AATACCGCTGATCCATGAGAC 57.607 47.619 0.00 0.00 0.00 3.36
914 936 0.176680 ACCGCTGATCCATGAGACAC 59.823 55.000 0.00 0.00 0.00 3.67
919 947 3.276857 GCTGATCCATGAGACACACATT 58.723 45.455 0.00 0.00 0.00 2.71
925 953 4.717877 TCCATGAGACACACATTCAAACT 58.282 39.130 0.00 0.00 0.00 2.66
989 1039 0.676151 AGTGTACCGTCCTCGTCTCC 60.676 60.000 0.00 0.00 35.01 3.71
1315 1372 1.686052 AGAGCAGATCGATCTTCCACC 59.314 52.381 25.25 12.34 36.88 4.61
1839 1900 5.880341 GGGCAGTGAGATATGTTGTAAAAC 58.120 41.667 0.00 0.00 0.00 2.43
1840 1901 5.163652 GGGCAGTGAGATATGTTGTAAAACC 60.164 44.000 0.00 0.00 0.00 3.27
1841 1902 5.648092 GGCAGTGAGATATGTTGTAAAACCT 59.352 40.000 0.00 0.00 0.00 3.50
1842 1903 6.403636 GGCAGTGAGATATGTTGTAAAACCTG 60.404 42.308 0.00 0.00 0.00 4.00
1843 1904 6.403636 GCAGTGAGATATGTTGTAAAACCTGG 60.404 42.308 0.00 0.00 0.00 4.45
1844 1905 5.648092 AGTGAGATATGTTGTAAAACCTGGC 59.352 40.000 0.00 0.00 0.00 4.85
1845 1906 4.947388 TGAGATATGTTGTAAAACCTGGCC 59.053 41.667 0.00 0.00 0.00 5.36
1846 1907 3.945285 AGATATGTTGTAAAACCTGGCCG 59.055 43.478 0.00 0.00 0.00 6.13
1847 1908 2.279935 ATGTTGTAAAACCTGGCCGA 57.720 45.000 0.00 0.00 0.00 5.54
1848 1909 2.054232 TGTTGTAAAACCTGGCCGAA 57.946 45.000 0.00 0.00 0.00 4.30
1849 1910 2.376109 TGTTGTAAAACCTGGCCGAAA 58.624 42.857 0.00 0.00 0.00 3.46
1850 1911 2.099427 TGTTGTAAAACCTGGCCGAAAC 59.901 45.455 0.00 0.00 0.00 2.78
1851 1912 2.054232 TGTAAAACCTGGCCGAAACA 57.946 45.000 0.00 0.00 0.00 2.83
1852 1913 2.588620 TGTAAAACCTGGCCGAAACAT 58.411 42.857 0.00 0.00 0.00 2.71
1853 1914 2.294791 TGTAAAACCTGGCCGAAACATG 59.705 45.455 0.00 0.00 0.00 3.21
1854 1915 1.408969 AAAACCTGGCCGAAACATGT 58.591 45.000 0.00 0.00 0.00 3.21
1855 1916 2.279935 AAACCTGGCCGAAACATGTA 57.720 45.000 0.00 0.00 0.00 2.29
1856 1917 2.279935 AACCTGGCCGAAACATGTAA 57.720 45.000 0.00 0.00 0.00 2.41
1857 1918 2.507407 ACCTGGCCGAAACATGTAAT 57.493 45.000 0.00 0.00 0.00 1.89
1858 1919 3.637911 ACCTGGCCGAAACATGTAATA 57.362 42.857 0.00 0.00 0.00 0.98
1859 1920 3.958018 ACCTGGCCGAAACATGTAATAA 58.042 40.909 0.00 0.00 0.00 1.40
1860 1921 4.532834 ACCTGGCCGAAACATGTAATAAT 58.467 39.130 0.00 0.00 0.00 1.28
1861 1922 4.338118 ACCTGGCCGAAACATGTAATAATG 59.662 41.667 0.00 0.00 0.00 1.90
1862 1923 4.338118 CCTGGCCGAAACATGTAATAATGT 59.662 41.667 0.00 0.00 42.62 2.71
1863 1924 5.529430 CCTGGCCGAAACATGTAATAATGTA 59.471 40.000 0.00 0.00 39.89 2.29
1864 1925 6.206634 CCTGGCCGAAACATGTAATAATGTAT 59.793 38.462 0.00 0.00 39.89 2.29
1865 1926 7.255451 CCTGGCCGAAACATGTAATAATGTATT 60.255 37.037 0.00 0.00 39.89 1.89
1866 1927 8.678593 TGGCCGAAACATGTAATAATGTATTA 57.321 30.769 0.00 0.00 39.89 0.98
1867 1928 8.561212 TGGCCGAAACATGTAATAATGTATTAC 58.439 33.333 0.00 10.06 46.69 1.89
1868 1929 8.780249 GGCCGAAACATGTAATAATGTATTACT 58.220 33.333 15.58 3.45 46.66 2.24
1885 1946 7.984391 TGTATTACTACATGCTCACAAATTGG 58.016 34.615 0.00 0.00 32.88 3.16
1886 1947 3.855689 ACTACATGCTCACAAATTGGC 57.144 42.857 0.00 0.00 0.00 4.52
1887 1948 3.156293 ACTACATGCTCACAAATTGGCA 58.844 40.909 0.00 0.00 36.30 4.92
1888 1949 2.736144 ACATGCTCACAAATTGGCAG 57.264 45.000 0.00 0.00 35.62 4.85
1889 1950 1.965643 ACATGCTCACAAATTGGCAGT 59.034 42.857 0.00 0.00 35.62 4.40
1890 1951 3.156293 ACATGCTCACAAATTGGCAGTA 58.844 40.909 0.00 0.00 35.62 2.74
1891 1952 3.192001 ACATGCTCACAAATTGGCAGTAG 59.808 43.478 0.00 0.00 35.62 2.57
1892 1953 2.862541 TGCTCACAAATTGGCAGTAGT 58.137 42.857 0.00 0.00 30.58 2.73
1893 1954 4.014569 TGCTCACAAATTGGCAGTAGTA 57.985 40.909 0.00 0.00 30.58 1.82
1894 1955 4.393834 TGCTCACAAATTGGCAGTAGTAA 58.606 39.130 0.00 0.00 30.58 2.24
1895 1956 4.824537 TGCTCACAAATTGGCAGTAGTAAA 59.175 37.500 0.00 0.00 30.58 2.01
1896 1957 5.300539 TGCTCACAAATTGGCAGTAGTAAAA 59.699 36.000 0.00 0.00 30.58 1.52
1897 1958 6.183360 TGCTCACAAATTGGCAGTAGTAAAAA 60.183 34.615 0.00 0.00 30.58 1.94
1917 1978 2.038387 AATGGAGTGGATGGTAACGC 57.962 50.000 0.00 0.00 42.51 4.84
1918 1979 0.908910 ATGGAGTGGATGGTAACGCA 59.091 50.000 0.00 0.00 42.51 5.24
1919 1980 0.687920 TGGAGTGGATGGTAACGCAA 59.312 50.000 0.00 0.00 42.51 4.85
1920 1981 1.072489 TGGAGTGGATGGTAACGCAAA 59.928 47.619 0.00 0.00 42.51 3.68
1921 1982 2.156098 GGAGTGGATGGTAACGCAAAA 58.844 47.619 0.00 0.00 42.51 2.44
1922 1983 2.554893 GGAGTGGATGGTAACGCAAAAA 59.445 45.455 0.00 0.00 42.51 1.94
1968 2029 9.667107 AAGTTAAAATACTTCGATCCAGATTGA 57.333 29.630 0.00 0.00 33.12 2.57
1969 2030 9.838339 AGTTAAAATACTTCGATCCAGATTGAT 57.162 29.630 0.00 0.00 31.67 2.57
1973 2034 9.784531 AAAATACTTCGATCCAGATTGATATGT 57.215 29.630 0.00 2.45 31.67 2.29
1976 2037 7.531857 ACTTCGATCCAGATTGATATGTAGT 57.468 36.000 0.00 0.00 31.67 2.73
1977 2038 8.637196 ACTTCGATCCAGATTGATATGTAGTA 57.363 34.615 0.00 0.00 31.67 1.82
1978 2039 9.078990 ACTTCGATCCAGATTGATATGTAGTAA 57.921 33.333 0.00 0.00 31.67 2.24
1980 2041 9.860898 TTCGATCCAGATTGATATGTAGTAATG 57.139 33.333 0.00 0.00 31.67 1.90
1981 2042 7.976175 TCGATCCAGATTGATATGTAGTAATGC 59.024 37.037 0.00 0.00 0.00 3.56
1982 2043 7.761249 CGATCCAGATTGATATGTAGTAATGCA 59.239 37.037 0.00 0.00 0.00 3.96
1983 2044 9.610705 GATCCAGATTGATATGTAGTAATGCAT 57.389 33.333 0.00 0.00 0.00 3.96
1984 2045 9.970553 ATCCAGATTGATATGTAGTAATGCATT 57.029 29.630 17.56 17.56 0.00 3.56
2002 2063 3.754955 CATTACTGCATGTGCTCTGTTG 58.245 45.455 6.55 0.00 42.66 3.33
2003 2064 2.549064 TACTGCATGTGCTCTGTTGT 57.451 45.000 6.55 0.00 42.66 3.32
2004 2065 1.683943 ACTGCATGTGCTCTGTTGTT 58.316 45.000 6.55 0.00 42.66 2.83
2005 2066 1.605710 ACTGCATGTGCTCTGTTGTTC 59.394 47.619 6.55 0.00 42.66 3.18
2006 2067 0.953727 TGCATGTGCTCTGTTGTTCC 59.046 50.000 6.55 0.00 42.66 3.62
2007 2068 0.242017 GCATGTGCTCTGTTGTTCCC 59.758 55.000 0.00 0.00 38.21 3.97
2008 2069 1.608055 CATGTGCTCTGTTGTTCCCA 58.392 50.000 0.00 0.00 0.00 4.37
2009 2070 1.955778 CATGTGCTCTGTTGTTCCCAA 59.044 47.619 0.00 0.00 0.00 4.12
2010 2071 1.679139 TGTGCTCTGTTGTTCCCAAG 58.321 50.000 0.00 0.00 0.00 3.61
2011 2072 0.312102 GTGCTCTGTTGTTCCCAAGC 59.688 55.000 0.00 0.00 0.00 4.01
2012 2073 0.106769 TGCTCTGTTGTTCCCAAGCA 60.107 50.000 0.00 0.00 0.00 3.91
2013 2074 1.251251 GCTCTGTTGTTCCCAAGCAT 58.749 50.000 0.00 0.00 0.00 3.79
2014 2075 2.224744 TGCTCTGTTGTTCCCAAGCATA 60.225 45.455 0.00 0.00 0.00 3.14
2015 2076 2.819608 GCTCTGTTGTTCCCAAGCATAA 59.180 45.455 0.00 0.00 0.00 1.90
2016 2077 3.445096 GCTCTGTTGTTCCCAAGCATAAT 59.555 43.478 0.00 0.00 0.00 1.28
2017 2078 4.439289 GCTCTGTTGTTCCCAAGCATAATC 60.439 45.833 0.00 0.00 0.00 1.75
2018 2079 4.922206 TCTGTTGTTCCCAAGCATAATCT 58.078 39.130 0.00 0.00 0.00 2.40
2019 2080 6.061022 TCTGTTGTTCCCAAGCATAATCTA 57.939 37.500 0.00 0.00 0.00 1.98
2020 2081 6.115446 TCTGTTGTTCCCAAGCATAATCTAG 58.885 40.000 0.00 0.00 0.00 2.43
2021 2082 4.640201 TGTTGTTCCCAAGCATAATCTAGC 59.360 41.667 0.00 0.00 0.00 3.42
2022 2083 4.502105 TGTTCCCAAGCATAATCTAGCA 57.498 40.909 0.00 0.00 0.00 3.49
2023 2084 5.052693 TGTTCCCAAGCATAATCTAGCAT 57.947 39.130 0.00 0.00 0.00 3.79
2024 2085 5.448654 TGTTCCCAAGCATAATCTAGCATT 58.551 37.500 0.00 0.00 0.00 3.56
2025 2086 5.893255 TGTTCCCAAGCATAATCTAGCATTT 59.107 36.000 0.00 0.00 0.00 2.32
2026 2087 6.183360 TGTTCCCAAGCATAATCTAGCATTTG 60.183 38.462 0.00 0.00 0.00 2.32
2027 2088 5.448654 TCCCAAGCATAATCTAGCATTTGT 58.551 37.500 0.00 0.00 0.00 2.83
2028 2089 5.300034 TCCCAAGCATAATCTAGCATTTGTG 59.700 40.000 0.00 0.00 0.00 3.33
2029 2090 5.068198 CCCAAGCATAATCTAGCATTTGTGT 59.932 40.000 0.00 0.00 0.00 3.72
2030 2091 6.262944 CCCAAGCATAATCTAGCATTTGTGTA 59.737 38.462 0.00 0.00 0.00 2.90
2031 2092 7.134815 CCAAGCATAATCTAGCATTTGTGTAC 58.865 38.462 0.00 0.00 0.00 2.90
2032 2093 7.201723 CCAAGCATAATCTAGCATTTGTGTACA 60.202 37.037 0.00 0.00 0.00 2.90
2033 2094 7.864108 AGCATAATCTAGCATTTGTGTACAA 57.136 32.000 0.00 0.00 0.00 2.41
2034 2095 7.697691 AGCATAATCTAGCATTTGTGTACAAC 58.302 34.615 0.00 0.00 35.28 3.32
2035 2096 7.336679 AGCATAATCTAGCATTTGTGTACAACA 59.663 33.333 0.00 0.00 35.28 3.33
2059 2120 5.452078 AAAAGTCAAAATGCTTCGATCCA 57.548 34.783 0.00 0.00 0.00 3.41
2060 2121 4.691860 AAGTCAAAATGCTTCGATCCAG 57.308 40.909 0.00 0.00 0.00 3.86
2061 2122 3.012518 AGTCAAAATGCTTCGATCCAGG 58.987 45.455 0.00 0.00 0.00 4.45
2062 2123 2.749621 GTCAAAATGCTTCGATCCAGGT 59.250 45.455 0.00 0.00 0.00 4.00
2063 2124 3.191371 GTCAAAATGCTTCGATCCAGGTT 59.809 43.478 0.00 0.00 0.00 3.50
2064 2125 3.191162 TCAAAATGCTTCGATCCAGGTTG 59.809 43.478 0.00 0.00 0.00 3.77
2065 2126 2.787473 AATGCTTCGATCCAGGTTGA 57.213 45.000 0.00 0.00 0.00 3.18
2066 2127 3.287867 AATGCTTCGATCCAGGTTGAT 57.712 42.857 0.00 0.00 0.00 2.57
2067 2128 4.422073 AATGCTTCGATCCAGGTTGATA 57.578 40.909 0.00 0.00 0.00 2.15
2068 2129 4.630644 ATGCTTCGATCCAGGTTGATAT 57.369 40.909 0.00 0.00 0.00 1.63
2069 2130 5.745312 ATGCTTCGATCCAGGTTGATATA 57.255 39.130 0.00 0.00 0.00 0.86
2070 2131 5.745312 TGCTTCGATCCAGGTTGATATAT 57.255 39.130 0.00 0.00 0.00 0.86
2071 2132 6.850752 TGCTTCGATCCAGGTTGATATATA 57.149 37.500 0.00 0.00 0.00 0.86
2072 2133 6.867550 TGCTTCGATCCAGGTTGATATATAG 58.132 40.000 0.00 0.00 0.00 1.31
2073 2134 6.437477 TGCTTCGATCCAGGTTGATATATAGT 59.563 38.462 0.00 0.00 0.00 2.12
2074 2135 7.614192 TGCTTCGATCCAGGTTGATATATAGTA 59.386 37.037 0.00 0.00 0.00 1.82
2075 2136 8.467598 GCTTCGATCCAGGTTGATATATAGTAA 58.532 37.037 0.00 0.00 0.00 2.24
2078 2139 8.414003 TCGATCCAGGTTGATATATAGTAATGC 58.586 37.037 0.00 0.00 0.00 3.56
2079 2140 8.197439 CGATCCAGGTTGATATATAGTAATGCA 58.803 37.037 0.00 0.00 0.00 3.96
2103 2164 7.962917 CATTAGTGCATGTTTATGTTTTTCCC 58.037 34.615 0.00 0.00 36.65 3.97
2104 2165 5.543507 AGTGCATGTTTATGTTTTTCCCA 57.456 34.783 0.00 0.00 36.65 4.37
2105 2166 5.923204 AGTGCATGTTTATGTTTTTCCCAA 58.077 33.333 0.00 0.00 36.65 4.12
2106 2167 5.990996 AGTGCATGTTTATGTTTTTCCCAAG 59.009 36.000 0.00 0.00 36.65 3.61
2107 2168 4.754114 TGCATGTTTATGTTTTTCCCAAGC 59.246 37.500 0.00 0.00 36.65 4.01
2108 2169 4.754114 GCATGTTTATGTTTTTCCCAAGCA 59.246 37.500 0.00 0.00 36.65 3.91
2109 2170 5.412286 GCATGTTTATGTTTTTCCCAAGCAT 59.588 36.000 0.00 0.00 36.65 3.79
2110 2171 6.593382 GCATGTTTATGTTTTTCCCAAGCATA 59.407 34.615 0.00 0.00 36.65 3.14
2111 2172 7.118971 GCATGTTTATGTTTTTCCCAAGCATAA 59.881 33.333 0.00 1.14 36.65 1.90
2112 2173 9.165035 CATGTTTATGTTTTTCCCAAGCATAAT 57.835 29.630 5.15 0.00 33.70 1.28
2113 2174 8.770438 TGTTTATGTTTTTCCCAAGCATAATC 57.230 30.769 5.15 5.49 33.70 1.75
2114 2175 8.592809 TGTTTATGTTTTTCCCAAGCATAATCT 58.407 29.630 5.15 0.00 33.70 2.40
2117 2178 6.207691 TGTTTTTCCCAAGCATAATCTAGC 57.792 37.500 0.00 0.00 0.00 3.42
2118 2179 5.714333 TGTTTTTCCCAAGCATAATCTAGCA 59.286 36.000 0.00 0.00 0.00 3.49
2119 2180 6.380846 TGTTTTTCCCAAGCATAATCTAGCAT 59.619 34.615 0.00 0.00 0.00 3.79
2120 2181 7.093377 TGTTTTTCCCAAGCATAATCTAGCATT 60.093 33.333 0.00 0.00 0.00 3.56
2121 2182 7.422465 TTTTCCCAAGCATAATCTAGCATTT 57.578 32.000 0.00 0.00 0.00 2.32
2122 2183 7.422465 TTTCCCAAGCATAATCTAGCATTTT 57.578 32.000 0.00 0.00 0.00 1.82
2123 2184 6.395426 TCCCAAGCATAATCTAGCATTTTG 57.605 37.500 0.00 0.00 0.00 2.44
2124 2185 5.893255 TCCCAAGCATAATCTAGCATTTTGT 59.107 36.000 0.00 0.00 0.00 2.83
2125 2186 5.981315 CCCAAGCATAATCTAGCATTTTGTG 59.019 40.000 0.00 0.00 0.00 3.33
2126 2187 5.981315 CCAAGCATAATCTAGCATTTTGTGG 59.019 40.000 0.00 0.00 0.00 4.17
2127 2188 5.779529 AGCATAATCTAGCATTTTGTGGG 57.220 39.130 0.00 0.00 0.00 4.61
2128 2189 4.038402 AGCATAATCTAGCATTTTGTGGGC 59.962 41.667 0.00 0.00 0.00 5.36
2129 2190 4.202141 GCATAATCTAGCATTTTGTGGGCA 60.202 41.667 0.00 0.00 0.00 5.36
2130 2191 5.681954 GCATAATCTAGCATTTTGTGGGCAA 60.682 40.000 0.00 0.00 0.00 4.52
2131 2192 3.874392 ATCTAGCATTTTGTGGGCAAC 57.126 42.857 0.00 0.00 33.82 4.17
2132 2193 1.539388 TCTAGCATTTTGTGGGCAACG 59.461 47.619 0.00 0.00 33.82 4.10
2133 2194 1.539388 CTAGCATTTTGTGGGCAACGA 59.461 47.619 0.00 0.00 33.82 3.85
2134 2195 0.749649 AGCATTTTGTGGGCAACGAA 59.250 45.000 0.00 0.00 33.82 3.85
2135 2196 1.137872 AGCATTTTGTGGGCAACGAAA 59.862 42.857 9.84 9.84 44.52 3.46
2136 2197 1.936547 GCATTTTGTGGGCAACGAAAA 59.063 42.857 11.40 7.92 43.80 2.29
2137 2198 2.352960 GCATTTTGTGGGCAACGAAAAA 59.647 40.909 11.40 2.35 43.80 1.94
2138 2199 3.545822 GCATTTTGTGGGCAACGAAAAAG 60.546 43.478 11.40 8.47 43.80 2.27
2139 2200 3.320673 TTTTGTGGGCAACGAAAAAGT 57.679 38.095 4.89 0.00 38.89 2.66
2140 2201 3.320673 TTTGTGGGCAACGAAAAAGTT 57.679 38.095 0.00 0.00 33.82 2.66
2141 2202 4.451629 TTTGTGGGCAACGAAAAAGTTA 57.548 36.364 0.00 0.00 33.82 2.24
2142 2203 4.451629 TTGTGGGCAACGAAAAAGTTAA 57.548 36.364 0.00 0.00 32.35 2.01
2143 2204 4.451629 TGTGGGCAACGAAAAAGTTAAA 57.548 36.364 0.00 0.00 32.35 1.52
2144 2205 4.817517 TGTGGGCAACGAAAAAGTTAAAA 58.182 34.783 0.00 0.00 32.35 1.52
2145 2206 5.420409 TGTGGGCAACGAAAAAGTTAAAAT 58.580 33.333 0.00 0.00 32.35 1.82
2146 2207 5.875359 TGTGGGCAACGAAAAAGTTAAAATT 59.125 32.000 0.00 0.00 32.35 1.82
2147 2208 6.036191 TGTGGGCAACGAAAAAGTTAAAATTC 59.964 34.615 0.00 0.00 32.35 2.17
2148 2209 6.256975 GTGGGCAACGAAAAAGTTAAAATTCT 59.743 34.615 0.00 0.00 32.35 2.40
2149 2210 6.819146 TGGGCAACGAAAAAGTTAAAATTCTT 59.181 30.769 0.00 0.00 32.35 2.52
2150 2211 7.010645 TGGGCAACGAAAAAGTTAAAATTCTTC 59.989 33.333 0.00 0.00 32.35 2.87
2151 2212 7.054998 GGCAACGAAAAAGTTAAAATTCTTCG 58.945 34.615 8.01 8.01 39.88 3.79
2152 2213 7.043920 GGCAACGAAAAAGTTAAAATTCTTCGA 60.044 33.333 13.90 0.00 38.01 3.71
2153 2214 8.476925 GCAACGAAAAAGTTAAAATTCTTCGAT 58.523 29.630 13.90 3.31 38.01 3.59
2154 2215 9.974528 CAACGAAAAAGTTAAAATTCTTCGATC 57.025 29.630 13.90 0.00 38.01 3.69
2155 2216 8.723777 ACGAAAAAGTTAAAATTCTTCGATCC 57.276 30.769 13.90 0.00 38.01 3.36
2156 2217 8.347035 ACGAAAAAGTTAAAATTCTTCGATCCA 58.653 29.630 13.90 0.00 38.01 3.41
2157 2218 8.840867 CGAAAAAGTTAAAATTCTTCGATCCAG 58.159 33.333 4.83 0.00 37.06 3.86
2158 2219 9.129209 GAAAAAGTTAAAATTCTTCGATCCAGG 57.871 33.333 0.00 0.00 0.00 4.45
2159 2220 7.761038 AAAGTTAAAATTCTTCGATCCAGGT 57.239 32.000 0.00 0.00 0.00 4.00
2160 2221 7.761038 AAGTTAAAATTCTTCGATCCAGGTT 57.239 32.000 0.00 0.00 0.00 3.50
2161 2222 8.857694 AAGTTAAAATTCTTCGATCCAGGTTA 57.142 30.769 0.00 0.00 0.00 2.85
2162 2223 8.857694 AGTTAAAATTCTTCGATCCAGGTTAA 57.142 30.769 0.00 0.00 0.00 2.01
2163 2224 9.292195 AGTTAAAATTCTTCGATCCAGGTTAAA 57.708 29.630 0.00 0.00 0.00 1.52
2164 2225 9.902196 GTTAAAATTCTTCGATCCAGGTTAAAA 57.098 29.630 0.00 0.00 0.00 1.52
2167 2228 7.761038 AATTCTTCGATCCAGGTTAAAAAGT 57.239 32.000 0.00 0.00 0.00 2.66
2168 2229 6.796705 TTCTTCGATCCAGGTTAAAAAGTC 57.203 37.500 0.00 0.00 0.00 3.01
2169 2230 5.860611 TCTTCGATCCAGGTTAAAAAGTCA 58.139 37.500 0.00 0.00 0.00 3.41
2170 2231 6.292923 TCTTCGATCCAGGTTAAAAAGTCAA 58.707 36.000 0.00 0.00 0.00 3.18
2171 2232 6.768861 TCTTCGATCCAGGTTAAAAAGTCAAA 59.231 34.615 0.00 0.00 0.00 2.69
2172 2233 7.447238 TCTTCGATCCAGGTTAAAAAGTCAAAT 59.553 33.333 0.00 0.00 0.00 2.32
2173 2234 6.908825 TCGATCCAGGTTAAAAAGTCAAATG 58.091 36.000 0.00 0.00 0.00 2.32
2174 2235 6.072175 TCGATCCAGGTTAAAAAGTCAAATGG 60.072 38.462 0.00 0.00 0.00 3.16
2175 2236 6.072175 CGATCCAGGTTAAAAAGTCAAATGGA 60.072 38.462 0.00 0.00 38.58 3.41
2207 2268 9.542462 TTTATGTACATAGAAATCTAGCCACAC 57.458 33.333 14.96 0.00 0.00 3.82
2208 2269 5.914033 TGTACATAGAAATCTAGCCACACC 58.086 41.667 0.00 0.00 0.00 4.16
2209 2270 4.060038 ACATAGAAATCTAGCCACACCG 57.940 45.455 0.00 0.00 0.00 4.94
2210 2271 3.704566 ACATAGAAATCTAGCCACACCGA 59.295 43.478 0.00 0.00 0.00 4.69
2211 2272 4.345257 ACATAGAAATCTAGCCACACCGAT 59.655 41.667 0.00 0.00 0.00 4.18
2212 2273 3.460857 AGAAATCTAGCCACACCGATC 57.539 47.619 0.00 0.00 0.00 3.69
2213 2274 2.128035 GAAATCTAGCCACACCGATCG 58.872 52.381 8.51 8.51 0.00 3.69
2214 2275 0.249489 AATCTAGCCACACCGATCGC 60.249 55.000 10.32 0.00 0.00 4.58
2215 2276 1.391933 ATCTAGCCACACCGATCGCA 61.392 55.000 10.32 0.00 0.00 5.10
2216 2277 1.153647 CTAGCCACACCGATCGCAA 60.154 57.895 10.32 0.00 0.00 4.85
2217 2278 0.739462 CTAGCCACACCGATCGCAAA 60.739 55.000 10.32 0.00 0.00 3.68
2218 2279 0.320858 TAGCCACACCGATCGCAAAA 60.321 50.000 10.32 0.00 0.00 2.44
2219 2280 1.169661 AGCCACACCGATCGCAAAAA 61.170 50.000 10.32 0.00 0.00 1.94
2236 2297 1.757682 AAAAACCAAGTCCACTGCGA 58.242 45.000 0.00 0.00 0.00 5.10
2237 2298 1.021968 AAAACCAAGTCCACTGCGAC 58.978 50.000 0.00 0.00 0.00 5.19
2238 2299 0.107410 AAACCAAGTCCACTGCGACA 60.107 50.000 0.00 0.00 35.07 4.35
2239 2300 0.107410 AACCAAGTCCACTGCGACAA 60.107 50.000 0.00 0.00 35.07 3.18
2240 2301 0.532862 ACCAAGTCCACTGCGACAAG 60.533 55.000 0.00 0.00 35.07 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 9.958180 TGTATCACTCCTTCATTAATTTCTCAA 57.042 29.630 0.00 0.00 0.00 3.02
5 6 9.605275 CTGTATCACTCCTTCATTAATTTCTCA 57.395 33.333 0.00 0.00 0.00 3.27
6 7 9.606631 ACTGTATCACTCCTTCATTAATTTCTC 57.393 33.333 0.00 0.00 0.00 2.87
7 8 9.606631 GACTGTATCACTCCTTCATTAATTTCT 57.393 33.333 0.00 0.00 0.00 2.52
8 9 8.831550 GGACTGTATCACTCCTTCATTAATTTC 58.168 37.037 0.00 0.00 0.00 2.17
9 10 8.328758 TGGACTGTATCACTCCTTCATTAATTT 58.671 33.333 0.00 0.00 0.00 1.82
10 11 7.861629 TGGACTGTATCACTCCTTCATTAATT 58.138 34.615 0.00 0.00 0.00 1.40
11 12 7.437713 TGGACTGTATCACTCCTTCATTAAT 57.562 36.000 0.00 0.00 0.00 1.40
12 13 6.867519 TGGACTGTATCACTCCTTCATTAA 57.132 37.500 0.00 0.00 0.00 1.40
13 14 8.547481 TTATGGACTGTATCACTCCTTCATTA 57.453 34.615 0.00 0.00 0.00 1.90
14 15 5.965033 ATGGACTGTATCACTCCTTCATT 57.035 39.130 0.00 0.00 0.00 2.57
15 16 7.623999 ATTATGGACTGTATCACTCCTTCAT 57.376 36.000 0.00 0.00 0.00 2.57
16 17 7.092891 ACAATTATGGACTGTATCACTCCTTCA 60.093 37.037 0.00 0.00 0.00 3.02
17 18 7.275920 ACAATTATGGACTGTATCACTCCTTC 58.724 38.462 0.00 0.00 0.00 3.46
18 19 7.126421 AGACAATTATGGACTGTATCACTCCTT 59.874 37.037 0.00 0.00 0.00 3.36
19 20 6.613271 AGACAATTATGGACTGTATCACTCCT 59.387 38.462 0.00 0.00 0.00 3.69
20 21 6.821388 AGACAATTATGGACTGTATCACTCC 58.179 40.000 0.00 0.00 0.00 3.85
21 22 9.817809 TTAAGACAATTATGGACTGTATCACTC 57.182 33.333 0.00 0.00 0.00 3.51
22 23 9.601217 GTTAAGACAATTATGGACTGTATCACT 57.399 33.333 0.00 0.00 0.00 3.41
23 24 8.827677 GGTTAAGACAATTATGGACTGTATCAC 58.172 37.037 0.00 0.00 0.00 3.06
24 25 8.768397 AGGTTAAGACAATTATGGACTGTATCA 58.232 33.333 0.00 0.00 0.00 2.15
25 26 9.614792 AAGGTTAAGACAATTATGGACTGTATC 57.385 33.333 0.00 0.00 0.00 2.24
26 27 9.975218 AAAGGTTAAGACAATTATGGACTGTAT 57.025 29.630 0.00 0.00 0.00 2.29
27 28 9.802039 AAAAGGTTAAGACAATTATGGACTGTA 57.198 29.630 0.00 0.00 0.00 2.74
28 29 8.706322 AAAAGGTTAAGACAATTATGGACTGT 57.294 30.769 0.00 0.00 0.00 3.55
53 54 6.049955 AGGCTAGCTGTAGTGTATGAAAAA 57.950 37.500 15.72 0.00 0.00 1.94
54 55 5.677319 AGGCTAGCTGTAGTGTATGAAAA 57.323 39.130 15.72 0.00 0.00 2.29
55 56 5.422331 AGAAGGCTAGCTGTAGTGTATGAAA 59.578 40.000 15.72 0.00 0.00 2.69
56 57 4.956700 AGAAGGCTAGCTGTAGTGTATGAA 59.043 41.667 15.72 0.00 0.00 2.57
57 58 4.537751 AGAAGGCTAGCTGTAGTGTATGA 58.462 43.478 15.72 0.00 0.00 2.15
58 59 4.339530 TGAGAAGGCTAGCTGTAGTGTATG 59.660 45.833 15.72 0.00 0.00 2.39
59 60 4.339814 GTGAGAAGGCTAGCTGTAGTGTAT 59.660 45.833 15.72 0.00 0.00 2.29
60 61 3.695060 GTGAGAAGGCTAGCTGTAGTGTA 59.305 47.826 15.72 0.00 0.00 2.90
61 62 2.494073 GTGAGAAGGCTAGCTGTAGTGT 59.506 50.000 15.72 0.00 0.00 3.55
62 63 2.757868 AGTGAGAAGGCTAGCTGTAGTG 59.242 50.000 15.72 0.00 0.00 2.74
63 64 3.094484 AGTGAGAAGGCTAGCTGTAGT 57.906 47.619 15.72 0.00 0.00 2.73
64 65 4.642885 ACTTAGTGAGAAGGCTAGCTGTAG 59.357 45.833 15.72 0.00 0.00 2.74
65 66 4.399618 CACTTAGTGAGAAGGCTAGCTGTA 59.600 45.833 15.72 0.00 35.23 2.74
66 67 3.194542 CACTTAGTGAGAAGGCTAGCTGT 59.805 47.826 15.72 2.11 35.23 4.40
67 68 3.445450 TCACTTAGTGAGAAGGCTAGCTG 59.555 47.826 15.72 0.00 37.67 4.24
68 69 3.702792 TCACTTAGTGAGAAGGCTAGCT 58.297 45.455 15.72 0.00 37.67 3.32
69 70 4.457834 TTCACTTAGTGAGAAGGCTAGC 57.542 45.455 14.99 6.04 43.69 3.42
70 71 5.866633 CAGTTTCACTTAGTGAGAAGGCTAG 59.133 44.000 14.99 0.00 43.69 3.42
71 72 5.538813 TCAGTTTCACTTAGTGAGAAGGCTA 59.461 40.000 14.99 0.00 43.69 3.93
72 73 4.345257 TCAGTTTCACTTAGTGAGAAGGCT 59.655 41.667 14.99 7.56 43.69 4.58
73 74 4.632153 TCAGTTTCACTTAGTGAGAAGGC 58.368 43.478 14.99 5.60 43.69 4.35
74 75 6.090483 TCTCAGTTTCACTTAGTGAGAAGG 57.910 41.667 14.99 6.89 44.79 3.46
77 78 6.716934 AGTTCTCAGTTTCACTTAGTGAGA 57.283 37.500 14.99 8.36 45.60 3.27
78 79 7.543868 CCATAGTTCTCAGTTTCACTTAGTGAG 59.456 40.741 14.99 4.22 43.69 3.51
79 80 7.015292 ACCATAGTTCTCAGTTTCACTTAGTGA 59.985 37.037 11.42 11.42 41.09 3.41
80 81 7.155328 ACCATAGTTCTCAGTTTCACTTAGTG 58.845 38.462 5.94 5.94 34.45 2.74
81 82 7.015292 TGACCATAGTTCTCAGTTTCACTTAGT 59.985 37.037 0.00 0.00 0.00 2.24
82 83 7.378966 TGACCATAGTTCTCAGTTTCACTTAG 58.621 38.462 0.00 0.00 0.00 2.18
83 84 7.297936 TGACCATAGTTCTCAGTTTCACTTA 57.702 36.000 0.00 0.00 0.00 2.24
84 85 6.174720 TGACCATAGTTCTCAGTTTCACTT 57.825 37.500 0.00 0.00 0.00 3.16
85 86 5.808366 TGACCATAGTTCTCAGTTTCACT 57.192 39.130 0.00 0.00 0.00 3.41
86 87 8.723942 ATATTGACCATAGTTCTCAGTTTCAC 57.276 34.615 0.00 0.00 0.00 3.18
90 91 9.823647 CTGTAATATTGACCATAGTTCTCAGTT 57.176 33.333 0.00 0.00 0.00 3.16
91 92 8.424918 CCTGTAATATTGACCATAGTTCTCAGT 58.575 37.037 0.00 0.00 0.00 3.41
92 93 8.642432 TCCTGTAATATTGACCATAGTTCTCAG 58.358 37.037 0.00 0.00 0.00 3.35
93 94 8.547481 TCCTGTAATATTGACCATAGTTCTCA 57.453 34.615 0.00 0.00 0.00 3.27
94 95 9.832445 TTTCCTGTAATATTGACCATAGTTCTC 57.168 33.333 0.00 0.00 0.00 2.87
95 96 9.838339 CTTTCCTGTAATATTGACCATAGTTCT 57.162 33.333 0.00 0.00 0.00 3.01
96 97 9.057089 CCTTTCCTGTAATATTGACCATAGTTC 57.943 37.037 0.00 0.00 0.00 3.01
97 98 8.778059 TCCTTTCCTGTAATATTGACCATAGTT 58.222 33.333 0.00 0.00 0.00 2.24
98 99 8.331931 TCCTTTCCTGTAATATTGACCATAGT 57.668 34.615 0.00 0.00 0.00 2.12
99 100 8.432805 ACTCCTTTCCTGTAATATTGACCATAG 58.567 37.037 0.00 0.00 0.00 2.23
100 101 8.210946 CACTCCTTTCCTGTAATATTGACCATA 58.789 37.037 0.00 0.00 0.00 2.74
101 102 7.056635 CACTCCTTTCCTGTAATATTGACCAT 58.943 38.462 0.00 0.00 0.00 3.55
102 103 6.214615 TCACTCCTTTCCTGTAATATTGACCA 59.785 38.462 0.00 0.00 0.00 4.02
103 104 6.650120 TCACTCCTTTCCTGTAATATTGACC 58.350 40.000 0.00 0.00 0.00 4.02
104 105 7.065923 GGTTCACTCCTTTCCTGTAATATTGAC 59.934 40.741 0.00 0.00 0.00 3.18
105 106 7.110155 GGTTCACTCCTTTCCTGTAATATTGA 58.890 38.462 0.00 0.00 0.00 2.57
106 107 6.884295 TGGTTCACTCCTTTCCTGTAATATTG 59.116 38.462 0.00 0.00 0.00 1.90
107 108 7.027874 TGGTTCACTCCTTTCCTGTAATATT 57.972 36.000 0.00 0.00 0.00 1.28
108 109 6.636454 TGGTTCACTCCTTTCCTGTAATAT 57.364 37.500 0.00 0.00 0.00 1.28
109 110 6.235664 GTTGGTTCACTCCTTTCCTGTAATA 58.764 40.000 0.00 0.00 0.00 0.98
110 111 4.993705 TGGTTCACTCCTTTCCTGTAAT 57.006 40.909 0.00 0.00 0.00 1.89
111 112 4.457466 GTTGGTTCACTCCTTTCCTGTAA 58.543 43.478 0.00 0.00 0.00 2.41
112 113 3.181448 GGTTGGTTCACTCCTTTCCTGTA 60.181 47.826 0.00 0.00 0.00 2.74
113 114 2.422945 GGTTGGTTCACTCCTTTCCTGT 60.423 50.000 0.00 0.00 0.00 4.00
114 115 2.158608 AGGTTGGTTCACTCCTTTCCTG 60.159 50.000 0.00 0.00 0.00 3.86
115 116 2.136026 AGGTTGGTTCACTCCTTTCCT 58.864 47.619 0.00 0.00 0.00 3.36
116 117 2.230660 CAGGTTGGTTCACTCCTTTCC 58.769 52.381 0.00 0.00 0.00 3.13
117 118 2.618709 CACAGGTTGGTTCACTCCTTTC 59.381 50.000 0.00 0.00 0.00 2.62
118 119 2.654863 CACAGGTTGGTTCACTCCTTT 58.345 47.619 0.00 0.00 0.00 3.11
119 120 1.133792 CCACAGGTTGGTTCACTCCTT 60.134 52.381 0.00 0.00 41.10 3.36
120 121 0.474184 CCACAGGTTGGTTCACTCCT 59.526 55.000 0.00 0.00 41.10 3.69
121 122 3.021451 CCACAGGTTGGTTCACTCC 57.979 57.895 0.00 0.00 41.10 3.85
132 133 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
133 134 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
134 135 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
135 136 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
136 137 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
137 138 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
138 139 1.913419 TGTCCCTCTAACCATCCAACC 59.087 52.381 0.00 0.00 0.00 3.77
139 140 2.572104 AGTGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
140 141 2.571653 CAGTGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
141 142 2.187958 CAGTGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
142 143 1.486726 CCAGTGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
143 144 2.188817 ACCAGTGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
144 145 2.344093 ACCAGTGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
145 146 3.371965 GATACCAGTGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
146 147 2.699321 GGATACCAGTGTCCCTCTAACC 59.301 54.545 2.30 0.00 35.14 2.85
161 162 1.768725 TCCTAATGGGCTGGGGATACC 60.769 57.143 0.00 0.00 46.71 2.73
162 163 1.742308 TCCTAATGGGCTGGGGATAC 58.258 55.000 0.00 0.00 34.39 2.24
163 164 2.278245 CATCCTAATGGGCTGGGGATA 58.722 52.381 0.00 0.00 35.34 2.59
164 165 1.078955 CATCCTAATGGGCTGGGGAT 58.921 55.000 0.00 0.00 37.28 3.85
165 166 1.719063 GCATCCTAATGGGCTGGGGA 61.719 60.000 0.00 0.00 33.19 4.81
166 167 1.228675 GCATCCTAATGGGCTGGGG 60.229 63.158 0.00 0.00 33.19 4.96
167 168 1.601759 CGCATCCTAATGGGCTGGG 60.602 63.158 0.00 0.00 38.77 4.45
168 169 4.069869 CGCATCCTAATGGGCTGG 57.930 61.111 0.00 0.00 38.77 4.85
172 173 1.605710 CTGAAAGCGCATCCTAATGGG 59.394 52.381 11.47 0.00 45.93 4.00
173 174 2.032550 CACTGAAAGCGCATCCTAATGG 59.967 50.000 11.47 0.00 37.60 3.16
174 175 2.032550 CCACTGAAAGCGCATCCTAATG 59.967 50.000 11.47 0.00 37.60 1.90
175 176 2.292267 CCACTGAAAGCGCATCCTAAT 58.708 47.619 11.47 0.00 37.60 1.73
176 177 1.678728 CCCACTGAAAGCGCATCCTAA 60.679 52.381 11.47 0.00 37.60 2.69
177 178 0.107703 CCCACTGAAAGCGCATCCTA 60.108 55.000 11.47 0.00 37.60 2.94
178 179 1.377725 CCCACTGAAAGCGCATCCT 60.378 57.895 11.47 0.00 37.60 3.24
179 180 1.372087 CTCCCACTGAAAGCGCATCC 61.372 60.000 11.47 0.00 37.60 3.51
180 181 1.372087 CCTCCCACTGAAAGCGCATC 61.372 60.000 11.47 8.39 37.60 3.91
181 182 1.377725 CCTCCCACTGAAAGCGCAT 60.378 57.895 11.47 0.00 37.60 4.73
182 183 2.032528 CCTCCCACTGAAAGCGCA 59.967 61.111 11.47 0.00 37.60 6.09
183 184 1.743252 CTCCTCCCACTGAAAGCGC 60.743 63.158 0.00 0.00 37.60 5.92
184 185 0.390472 GTCTCCTCCCACTGAAAGCG 60.390 60.000 0.00 0.00 37.60 4.68
185 186 0.390472 CGTCTCCTCCCACTGAAAGC 60.390 60.000 0.00 0.00 37.60 3.51
186 187 0.969894 ACGTCTCCTCCCACTGAAAG 59.030 55.000 0.00 0.00 42.29 2.62
187 188 1.343465 GAACGTCTCCTCCCACTGAAA 59.657 52.381 0.00 0.00 0.00 2.69
188 189 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
189 190 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
190 191 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
191 192 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
212 213 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
213 214 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
226 227 7.246311 TCTTAAGATTTACGAAGTCACCGTAG 58.754 38.462 0.00 0.00 43.93 3.51
227 228 7.144722 TCTTAAGATTTACGAAGTCACCGTA 57.855 36.000 0.00 0.00 43.93 4.02
228 229 6.017400 TCTTAAGATTTACGAAGTCACCGT 57.983 37.500 0.00 0.00 43.93 4.83
229 230 6.750501 TCATCTTAAGATTTACGAAGTCACCG 59.249 38.462 15.49 0.00 35.39 4.94
230 231 8.649973 ATCATCTTAAGATTTACGAAGTCACC 57.350 34.615 15.49 0.00 35.39 4.02
234 235 9.209175 GGCATATCATCTTAAGATTTACGAAGT 57.791 33.333 15.49 0.00 37.29 3.01
235 236 8.376203 CGGCATATCATCTTAAGATTTACGAAG 58.624 37.037 15.49 3.04 31.21 3.79
236 237 7.330946 CCGGCATATCATCTTAAGATTTACGAA 59.669 37.037 15.49 0.00 31.21 3.85
237 238 6.811665 CCGGCATATCATCTTAAGATTTACGA 59.188 38.462 15.49 10.07 31.21 3.43
238 239 6.455646 GCCGGCATATCATCTTAAGATTTACG 60.456 42.308 24.80 12.15 31.21 3.18
239 240 6.595716 AGCCGGCATATCATCTTAAGATTTAC 59.404 38.462 31.54 2.79 31.21 2.01
240 241 6.711277 AGCCGGCATATCATCTTAAGATTTA 58.289 36.000 31.54 10.60 31.21 1.40
241 242 5.564550 AGCCGGCATATCATCTTAAGATTT 58.435 37.500 31.54 8.78 31.21 2.17
242 243 5.171339 AGCCGGCATATCATCTTAAGATT 57.829 39.130 31.54 5.12 31.21 2.40
243 244 4.223700 TGAGCCGGCATATCATCTTAAGAT 59.776 41.667 31.54 12.37 34.56 2.40
244 245 3.578282 TGAGCCGGCATATCATCTTAAGA 59.422 43.478 31.54 7.82 0.00 2.10
245 246 3.930336 TGAGCCGGCATATCATCTTAAG 58.070 45.455 31.54 0.00 0.00 1.85
246 247 3.324846 ACTGAGCCGGCATATCATCTTAA 59.675 43.478 31.54 0.00 0.00 1.85
247 248 2.899900 ACTGAGCCGGCATATCATCTTA 59.100 45.455 31.54 0.00 0.00 2.10
248 249 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
249 250 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
250 251 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
251 252 1.274728 GAGACTGAGCCGGCATATCAT 59.725 52.381 31.54 13.17 0.00 2.45
252 253 0.676184 GAGACTGAGCCGGCATATCA 59.324 55.000 31.54 22.44 0.00 2.15
253 254 0.965439 AGAGACTGAGCCGGCATATC 59.035 55.000 31.54 18.63 0.00 1.63
254 255 0.965439 GAGAGACTGAGCCGGCATAT 59.035 55.000 31.54 8.11 0.00 1.78
255 256 1.448119 CGAGAGACTGAGCCGGCATA 61.448 60.000 31.54 16.21 0.00 3.14
256 257 2.780094 CGAGAGACTGAGCCGGCAT 61.780 63.158 31.54 14.28 0.00 4.40
257 258 3.443925 CGAGAGACTGAGCCGGCA 61.444 66.667 31.54 7.98 0.00 5.69
258 259 2.606155 CTTCGAGAGACTGAGCCGGC 62.606 65.000 21.89 21.89 41.84 6.13
259 260 1.431440 CTTCGAGAGACTGAGCCGG 59.569 63.158 0.00 0.00 41.84 6.13
260 261 1.309499 ACCTTCGAGAGACTGAGCCG 61.309 60.000 0.00 0.00 41.84 5.52
261 262 0.172352 CACCTTCGAGAGACTGAGCC 59.828 60.000 0.00 0.00 41.84 4.70
262 263 0.457681 GCACCTTCGAGAGACTGAGC 60.458 60.000 0.00 0.00 41.84 4.26
263 264 1.132262 GAGCACCTTCGAGAGACTGAG 59.868 57.143 0.00 0.00 41.84 3.35
264 265 1.169577 GAGCACCTTCGAGAGACTGA 58.830 55.000 0.00 0.00 41.84 3.41
265 266 0.884514 TGAGCACCTTCGAGAGACTG 59.115 55.000 0.00 0.00 41.84 3.51
266 267 1.846007 ATGAGCACCTTCGAGAGACT 58.154 50.000 0.00 0.00 41.84 3.24
267 268 3.490078 CCTTATGAGCACCTTCGAGAGAC 60.490 52.174 0.00 0.00 41.84 3.36
268 269 2.690497 CCTTATGAGCACCTTCGAGAGA 59.310 50.000 0.00 0.00 39.20 3.10
269 270 2.690497 TCCTTATGAGCACCTTCGAGAG 59.310 50.000 0.00 0.00 0.00 3.20
270 271 2.735151 TCCTTATGAGCACCTTCGAGA 58.265 47.619 0.00 0.00 0.00 4.04
271 272 3.742433 ATCCTTATGAGCACCTTCGAG 57.258 47.619 0.00 0.00 0.00 4.04
272 273 3.574396 CCTATCCTTATGAGCACCTTCGA 59.426 47.826 0.00 0.00 0.00 3.71
273 274 3.574396 TCCTATCCTTATGAGCACCTTCG 59.426 47.826 0.00 0.00 0.00 3.79
274 275 5.012561 ACATCCTATCCTTATGAGCACCTTC 59.987 44.000 0.00 0.00 0.00 3.46
275 276 4.910304 ACATCCTATCCTTATGAGCACCTT 59.090 41.667 0.00 0.00 0.00 3.50
276 277 4.285517 CACATCCTATCCTTATGAGCACCT 59.714 45.833 0.00 0.00 0.00 4.00
277 278 4.040952 ACACATCCTATCCTTATGAGCACC 59.959 45.833 0.00 0.00 0.00 5.01
278 279 4.993584 CACACATCCTATCCTTATGAGCAC 59.006 45.833 0.00 0.00 0.00 4.40
279 280 4.655649 ACACACATCCTATCCTTATGAGCA 59.344 41.667 0.00 0.00 0.00 4.26
280 281 4.993584 CACACACATCCTATCCTTATGAGC 59.006 45.833 0.00 0.00 0.00 4.26
281 282 6.166984 ACACACACATCCTATCCTTATGAG 57.833 41.667 0.00 0.00 0.00 2.90
282 283 6.560003 AACACACACATCCTATCCTTATGA 57.440 37.500 0.00 0.00 0.00 2.15
283 284 8.908786 ATAAACACACACATCCTATCCTTATG 57.091 34.615 0.00 0.00 0.00 1.90
285 286 8.647796 CCTATAAACACACACATCCTATCCTTA 58.352 37.037 0.00 0.00 0.00 2.69
286 287 7.347222 TCCTATAAACACACACATCCTATCCTT 59.653 37.037 0.00 0.00 0.00 3.36
287 288 6.844388 TCCTATAAACACACACATCCTATCCT 59.156 38.462 0.00 0.00 0.00 3.24
288 289 7.062749 TCCTATAAACACACACATCCTATCC 57.937 40.000 0.00 0.00 0.00 2.59
289 290 8.993121 CATTCCTATAAACACACACATCCTATC 58.007 37.037 0.00 0.00 0.00 2.08
290 291 8.713971 TCATTCCTATAAACACACACATCCTAT 58.286 33.333 0.00 0.00 0.00 2.57
291 292 8.084985 TCATTCCTATAAACACACACATCCTA 57.915 34.615 0.00 0.00 0.00 2.94
292 293 6.957631 TCATTCCTATAAACACACACATCCT 58.042 36.000 0.00 0.00 0.00 3.24
293 294 6.823689 ACTCATTCCTATAAACACACACATCC 59.176 38.462 0.00 0.00 0.00 3.51
294 295 7.334421 ACACTCATTCCTATAAACACACACATC 59.666 37.037 0.00 0.00 0.00 3.06
295 296 7.168219 ACACTCATTCCTATAAACACACACAT 58.832 34.615 0.00 0.00 0.00 3.21
296 297 6.530120 ACACTCATTCCTATAAACACACACA 58.470 36.000 0.00 0.00 0.00 3.72
297 298 8.604035 CATACACTCATTCCTATAAACACACAC 58.396 37.037 0.00 0.00 0.00 3.82
298 299 7.279981 GCATACACTCATTCCTATAAACACACA 59.720 37.037 0.00 0.00 0.00 3.72
299 300 7.516785 CGCATACACTCATTCCTATAAACACAC 60.517 40.741 0.00 0.00 0.00 3.82
300 301 6.478673 CGCATACACTCATTCCTATAAACACA 59.521 38.462 0.00 0.00 0.00 3.72
301 302 6.564125 GCGCATACACTCATTCCTATAAACAC 60.564 42.308 0.30 0.00 0.00 3.32
302 303 5.465390 GCGCATACACTCATTCCTATAAACA 59.535 40.000 0.30 0.00 0.00 2.83
303 304 5.388475 CGCGCATACACTCATTCCTATAAAC 60.388 44.000 8.75 0.00 0.00 2.01
304 305 4.684242 CGCGCATACACTCATTCCTATAAA 59.316 41.667 8.75 0.00 0.00 1.40
305 306 4.234574 CGCGCATACACTCATTCCTATAA 58.765 43.478 8.75 0.00 0.00 0.98
306 307 3.254903 ACGCGCATACACTCATTCCTATA 59.745 43.478 5.73 0.00 0.00 1.31
307 308 2.035961 ACGCGCATACACTCATTCCTAT 59.964 45.455 5.73 0.00 0.00 2.57
308 309 1.407618 ACGCGCATACACTCATTCCTA 59.592 47.619 5.73 0.00 0.00 2.94
309 310 0.175760 ACGCGCATACACTCATTCCT 59.824 50.000 5.73 0.00 0.00 3.36
310 311 1.847818 TACGCGCATACACTCATTCC 58.152 50.000 5.73 0.00 0.00 3.01
311 312 2.794910 ACATACGCGCATACACTCATTC 59.205 45.455 5.73 0.00 0.00 2.67
312 313 2.821546 ACATACGCGCATACACTCATT 58.178 42.857 5.73 0.00 0.00 2.57
313 314 2.509052 ACATACGCGCATACACTCAT 57.491 45.000 5.73 0.00 0.00 2.90
314 315 3.423996 TTACATACGCGCATACACTCA 57.576 42.857 5.73 0.00 0.00 3.41
315 316 4.966850 ATTTACATACGCGCATACACTC 57.033 40.909 5.73 0.00 0.00 3.51
316 317 7.595875 TGTAATATTTACATACGCGCATACACT 59.404 33.333 5.73 0.00 0.00 3.55
317 318 7.722336 TGTAATATTTACATACGCGCATACAC 58.278 34.615 5.73 0.00 0.00 2.90
318 319 7.062488 CCTGTAATATTTACATACGCGCATACA 59.938 37.037 5.73 0.00 0.00 2.29
319 320 7.274033 TCCTGTAATATTTACATACGCGCATAC 59.726 37.037 5.73 0.00 0.00 2.39
320 321 7.314393 TCCTGTAATATTTACATACGCGCATA 58.686 34.615 5.73 0.00 0.00 3.14
321 322 6.160684 TCCTGTAATATTTACATACGCGCAT 58.839 36.000 5.73 0.00 0.00 4.73
322 323 5.530712 TCCTGTAATATTTACATACGCGCA 58.469 37.500 5.73 0.00 0.00 6.09
323 324 6.456447 TTCCTGTAATATTTACATACGCGC 57.544 37.500 5.73 0.00 0.00 6.86
324 325 7.383029 TCCTTTCCTGTAATATTTACATACGCG 59.617 37.037 3.53 3.53 0.00 6.01
325 326 8.597662 TCCTTTCCTGTAATATTTACATACGC 57.402 34.615 0.00 0.00 0.00 4.42
379 380 7.413877 CGGTTGAGACGATAAAACTAGACTAGT 60.414 40.741 9.45 9.45 41.73 2.57
444 453 4.165950 ACTTATGTGGAAGGCACATGGATA 59.834 41.667 0.01 0.00 42.52 2.59
456 465 4.787551 ACACAGGTTTCACTTATGTGGAA 58.212 39.130 8.74 3.75 44.27 3.53
466 475 3.139077 CCCAGAACTACACAGGTTTCAC 58.861 50.000 0.00 0.00 0.00 3.18
499 508 2.872001 GCTCTCGTCGTGAGCGTG 60.872 66.667 27.52 5.43 45.73 5.34
520 529 1.071471 GGAGGGATATGCCACCACG 59.929 63.158 22.20 0.00 38.95 4.94
538 547 3.716006 CCAAGTCAGTGCGCCACG 61.716 66.667 4.18 0.00 39.64 4.94
787 806 1.329599 GCGGATAATTGGTGGAACGAC 59.670 52.381 0.00 0.00 38.12 4.34
789 808 1.374560 TGCGGATAATTGGTGGAACG 58.625 50.000 0.00 0.00 38.12 3.95
832 852 1.603326 TCGGCGGTTACAAAAGAAACC 59.397 47.619 7.21 0.00 41.48 3.27
885 906 4.819105 TGGATCAGCGGTATTTATAGGG 57.181 45.455 0.00 0.00 0.00 3.53
912 934 4.539870 GATGGTGTGAGTTTGAATGTGTG 58.460 43.478 0.00 0.00 0.00 3.82
914 936 3.498018 TCGATGGTGTGAGTTTGAATGTG 59.502 43.478 0.00 0.00 0.00 3.21
919 947 3.676291 TGATCGATGGTGTGAGTTTGA 57.324 42.857 0.54 0.00 0.00 2.69
925 953 2.083774 GGCTTTTGATCGATGGTGTGA 58.916 47.619 0.54 0.00 0.00 3.58
1027 1077 0.320771 ACGATCAACACCAGGCAGAC 60.321 55.000 0.00 0.00 0.00 3.51
1033 1083 2.002586 CAGGCTAACGATCAACACCAG 58.997 52.381 0.00 0.00 0.00 4.00
1092 1142 2.202743 GCAGCATAGACGACGCCA 60.203 61.111 0.00 0.00 0.00 5.69
1315 1372 3.864686 GCATGGCACCGTGCGTAG 61.865 66.667 17.58 9.90 46.88 3.51
1816 1877 5.163652 GGTTTTACAACATATCTCACTGCCC 60.164 44.000 0.00 0.00 34.15 5.36
1817 1878 5.648092 AGGTTTTACAACATATCTCACTGCC 59.352 40.000 0.00 0.00 34.15 4.85
1818 1879 6.403636 CCAGGTTTTACAACATATCTCACTGC 60.404 42.308 0.00 0.00 34.15 4.40
1819 1880 6.403636 GCCAGGTTTTACAACATATCTCACTG 60.404 42.308 0.00 0.00 34.15 3.66
1820 1881 5.648092 GCCAGGTTTTACAACATATCTCACT 59.352 40.000 0.00 0.00 34.15 3.41
1821 1882 5.163652 GGCCAGGTTTTACAACATATCTCAC 60.164 44.000 0.00 0.00 34.15 3.51
1822 1883 4.947388 GGCCAGGTTTTACAACATATCTCA 59.053 41.667 0.00 0.00 34.15 3.27
1823 1884 4.035208 CGGCCAGGTTTTACAACATATCTC 59.965 45.833 2.24 0.00 34.15 2.75
1824 1885 3.945285 CGGCCAGGTTTTACAACATATCT 59.055 43.478 2.24 0.00 34.15 1.98
1825 1886 3.942748 TCGGCCAGGTTTTACAACATATC 59.057 43.478 2.24 0.00 34.15 1.63
1826 1887 3.958018 TCGGCCAGGTTTTACAACATAT 58.042 40.909 2.24 0.00 34.15 1.78
1827 1888 3.420300 TCGGCCAGGTTTTACAACATA 57.580 42.857 2.24 0.00 34.15 2.29
1828 1889 2.279935 TCGGCCAGGTTTTACAACAT 57.720 45.000 2.24 0.00 34.15 2.71
1829 1890 2.054232 TTCGGCCAGGTTTTACAACA 57.946 45.000 2.24 0.00 34.15 3.33
1830 1891 2.099427 TGTTTCGGCCAGGTTTTACAAC 59.901 45.455 2.24 0.00 0.00 3.32
1831 1892 2.376109 TGTTTCGGCCAGGTTTTACAA 58.624 42.857 2.24 0.00 0.00 2.41
1832 1893 2.054232 TGTTTCGGCCAGGTTTTACA 57.946 45.000 2.24 0.00 0.00 2.41
1833 1894 2.295070 ACATGTTTCGGCCAGGTTTTAC 59.705 45.455 2.24 0.00 0.00 2.01
1834 1895 2.588620 ACATGTTTCGGCCAGGTTTTA 58.411 42.857 2.24 0.00 0.00 1.52
1835 1896 1.408969 ACATGTTTCGGCCAGGTTTT 58.591 45.000 2.24 0.00 0.00 2.43
1836 1897 2.279935 TACATGTTTCGGCCAGGTTT 57.720 45.000 2.30 0.00 0.00 3.27
1837 1898 2.279935 TTACATGTTTCGGCCAGGTT 57.720 45.000 2.30 0.00 0.00 3.50
1838 1899 2.507407 ATTACATGTTTCGGCCAGGT 57.493 45.000 2.30 0.00 0.00 4.00
1839 1900 4.338118 ACATTATTACATGTTTCGGCCAGG 59.662 41.667 2.30 0.00 33.29 4.45
1840 1901 5.499139 ACATTATTACATGTTTCGGCCAG 57.501 39.130 2.30 0.00 33.29 4.85
1841 1902 7.575414 AATACATTATTACATGTTTCGGCCA 57.425 32.000 2.30 0.00 38.40 5.36
1842 1903 8.944212 GTAATACATTATTACATGTTTCGGCC 57.056 34.615 2.30 0.00 46.11 6.13
1859 1920 8.623903 CCAATTTGTGAGCATGTAGTAATACAT 58.376 33.333 9.96 9.96 40.99 2.29
1860 1921 7.415095 GCCAATTTGTGAGCATGTAGTAATACA 60.415 37.037 5.37 5.37 0.00 2.29
1861 1922 6.912591 GCCAATTTGTGAGCATGTAGTAATAC 59.087 38.462 0.00 0.00 0.00 1.89
1862 1923 6.601217 TGCCAATTTGTGAGCATGTAGTAATA 59.399 34.615 0.00 0.00 31.10 0.98
1863 1924 5.418524 TGCCAATTTGTGAGCATGTAGTAAT 59.581 36.000 0.00 0.00 31.10 1.89
1864 1925 4.764308 TGCCAATTTGTGAGCATGTAGTAA 59.236 37.500 0.00 0.00 31.10 2.24
1865 1926 4.331108 TGCCAATTTGTGAGCATGTAGTA 58.669 39.130 0.00 0.00 31.10 1.82
1866 1927 3.156293 TGCCAATTTGTGAGCATGTAGT 58.844 40.909 0.00 0.00 31.10 2.73
1867 1928 3.192001 ACTGCCAATTTGTGAGCATGTAG 59.808 43.478 0.00 0.00 34.30 2.74
1868 1929 3.156293 ACTGCCAATTTGTGAGCATGTA 58.844 40.909 0.00 0.00 34.30 2.29
1869 1930 1.965643 ACTGCCAATTTGTGAGCATGT 59.034 42.857 0.00 0.00 34.30 3.21
1870 1931 2.736144 ACTGCCAATTTGTGAGCATG 57.264 45.000 0.28 0.00 34.30 4.06
1871 1932 3.424703 ACTACTGCCAATTTGTGAGCAT 58.575 40.909 0.28 0.00 34.30 3.79
1872 1933 2.862541 ACTACTGCCAATTTGTGAGCA 58.137 42.857 0.00 0.00 33.86 4.26
1873 1934 5.371115 TTTACTACTGCCAATTTGTGAGC 57.629 39.130 0.00 0.00 0.00 4.26
1895 1956 3.192633 GCGTTACCATCCACTCCATTTTT 59.807 43.478 0.00 0.00 0.00 1.94
1896 1957 2.752903 GCGTTACCATCCACTCCATTTT 59.247 45.455 0.00 0.00 0.00 1.82
1897 1958 2.290641 TGCGTTACCATCCACTCCATTT 60.291 45.455 0.00 0.00 0.00 2.32
1898 1959 1.280710 TGCGTTACCATCCACTCCATT 59.719 47.619 0.00 0.00 0.00 3.16
1899 1960 0.908910 TGCGTTACCATCCACTCCAT 59.091 50.000 0.00 0.00 0.00 3.41
1900 1961 0.687920 TTGCGTTACCATCCACTCCA 59.312 50.000 0.00 0.00 0.00 3.86
1901 1962 1.816074 TTTGCGTTACCATCCACTCC 58.184 50.000 0.00 0.00 0.00 3.85
1902 1963 3.907894 TTTTTGCGTTACCATCCACTC 57.092 42.857 0.00 0.00 0.00 3.51
1942 2003 9.667107 TCAATCTGGATCGAAGTATTTTAACTT 57.333 29.630 0.00 0.00 42.36 2.66
1943 2004 9.838339 ATCAATCTGGATCGAAGTATTTTAACT 57.162 29.630 0.00 0.00 0.00 2.24
1947 2008 9.784531 ACATATCAATCTGGATCGAAGTATTTT 57.215 29.630 0.00 0.00 0.00 1.82
1950 2011 9.249053 ACTACATATCAATCTGGATCGAAGTAT 57.751 33.333 0.00 0.00 0.00 2.12
1951 2012 8.637196 ACTACATATCAATCTGGATCGAAGTA 57.363 34.615 0.00 0.00 0.00 2.24
1952 2013 7.531857 ACTACATATCAATCTGGATCGAAGT 57.468 36.000 0.00 0.00 0.00 3.01
1954 2015 9.860898 CATTACTACATATCAATCTGGATCGAA 57.139 33.333 0.00 0.00 0.00 3.71
1955 2016 7.976175 GCATTACTACATATCAATCTGGATCGA 59.024 37.037 0.00 0.00 0.00 3.59
1956 2017 7.761249 TGCATTACTACATATCAATCTGGATCG 59.239 37.037 0.00 0.00 0.00 3.69
1957 2018 9.610705 ATGCATTACTACATATCAATCTGGATC 57.389 33.333 0.00 0.00 0.00 3.36
1958 2019 9.970553 AATGCATTACTACATATCAATCTGGAT 57.029 29.630 11.02 0.00 0.00 3.41
1980 2041 1.741706 ACAGAGCACATGCAGTAATGC 59.258 47.619 8.51 8.51 45.16 3.56
1981 2042 3.189910 ACAACAGAGCACATGCAGTAATG 59.810 43.478 6.64 2.46 45.16 1.90
1982 2043 3.415212 ACAACAGAGCACATGCAGTAAT 58.585 40.909 6.64 0.00 45.16 1.89
1983 2044 2.849942 ACAACAGAGCACATGCAGTAA 58.150 42.857 6.64 0.00 45.16 2.24
1984 2045 2.549064 ACAACAGAGCACATGCAGTA 57.451 45.000 6.64 0.00 45.16 2.74
1985 2046 1.605710 GAACAACAGAGCACATGCAGT 59.394 47.619 6.64 0.00 45.16 4.40
1986 2047 1.068748 GGAACAACAGAGCACATGCAG 60.069 52.381 6.64 0.00 45.16 4.41
1987 2048 0.953727 GGAACAACAGAGCACATGCA 59.046 50.000 6.64 0.00 45.16 3.96
1988 2049 0.242017 GGGAACAACAGAGCACATGC 59.758 55.000 0.00 0.00 42.49 4.06
1989 2050 1.608055 TGGGAACAACAGAGCACATG 58.392 50.000 0.00 0.00 37.44 3.21
1991 2052 6.803787 TATGCTTGGGAACAACAGAGCACA 62.804 45.833 0.00 0.00 46.33 4.57
1992 2053 3.654888 ATGCTTGGGAACAACAGAGCAC 61.655 50.000 0.00 0.00 46.33 4.40
2001 2062 4.502105 TGCTAGATTATGCTTGGGAACA 57.498 40.909 0.00 0.00 39.83 3.18
2002 2063 6.183360 ACAAATGCTAGATTATGCTTGGGAAC 60.183 38.462 0.00 0.00 0.00 3.62
2003 2064 5.893255 ACAAATGCTAGATTATGCTTGGGAA 59.107 36.000 0.00 0.00 0.00 3.97
2004 2065 5.300034 CACAAATGCTAGATTATGCTTGGGA 59.700 40.000 0.00 0.00 0.00 4.37
2005 2066 5.068198 ACACAAATGCTAGATTATGCTTGGG 59.932 40.000 0.00 0.00 0.00 4.12
2006 2067 6.140303 ACACAAATGCTAGATTATGCTTGG 57.860 37.500 0.00 0.00 0.00 3.61
2007 2068 7.696755 TGTACACAAATGCTAGATTATGCTTG 58.303 34.615 0.00 0.00 0.00 4.01
2008 2069 7.864108 TGTACACAAATGCTAGATTATGCTT 57.136 32.000 0.00 0.00 0.00 3.91
2009 2070 7.336679 TGTTGTACACAAATGCTAGATTATGCT 59.663 33.333 0.00 0.00 37.63 3.79
2010 2071 7.471721 TGTTGTACACAAATGCTAGATTATGC 58.528 34.615 0.00 0.00 37.63 3.14
2036 2097 5.841810 TGGATCGAAGCATTTTGACTTTTT 58.158 33.333 0.00 0.00 29.55 1.94
2037 2098 5.452078 TGGATCGAAGCATTTTGACTTTT 57.548 34.783 0.00 0.00 29.55 2.27
2038 2099 4.082571 CCTGGATCGAAGCATTTTGACTTT 60.083 41.667 0.00 0.00 29.55 2.66
2039 2100 3.441572 CCTGGATCGAAGCATTTTGACTT 59.558 43.478 0.00 0.00 29.55 3.01
2040 2101 3.012518 CCTGGATCGAAGCATTTTGACT 58.987 45.455 0.00 0.00 29.55 3.41
2041 2102 2.749621 ACCTGGATCGAAGCATTTTGAC 59.250 45.455 0.00 0.00 29.55 3.18
2042 2103 3.071874 ACCTGGATCGAAGCATTTTGA 57.928 42.857 0.00 0.00 0.00 2.69
2043 2104 3.191162 TCAACCTGGATCGAAGCATTTTG 59.809 43.478 0.00 0.00 0.00 2.44
2044 2105 3.420893 TCAACCTGGATCGAAGCATTTT 58.579 40.909 0.00 0.00 0.00 1.82
2045 2106 3.071874 TCAACCTGGATCGAAGCATTT 57.928 42.857 0.00 0.00 0.00 2.32
2046 2107 2.787473 TCAACCTGGATCGAAGCATT 57.213 45.000 0.00 0.00 0.00 3.56
2047 2108 4.630644 ATATCAACCTGGATCGAAGCAT 57.369 40.909 0.00 0.00 0.00 3.79
2048 2109 5.745312 ATATATCAACCTGGATCGAAGCA 57.255 39.130 0.00 0.00 0.00 3.91
2049 2110 6.868622 ACTATATATCAACCTGGATCGAAGC 58.131 40.000 0.00 0.00 0.00 3.86
2052 2113 8.414003 GCATTACTATATATCAACCTGGATCGA 58.586 37.037 0.00 0.00 0.00 3.59
2053 2114 8.197439 TGCATTACTATATATCAACCTGGATCG 58.803 37.037 0.00 0.00 0.00 3.69
2078 2139 7.601886 TGGGAAAAACATAAACATGCACTAATG 59.398 33.333 0.00 0.00 0.00 1.90
2079 2140 7.675062 TGGGAAAAACATAAACATGCACTAAT 58.325 30.769 0.00 0.00 0.00 1.73
2080 2141 7.055667 TGGGAAAAACATAAACATGCACTAA 57.944 32.000 0.00 0.00 0.00 2.24
2081 2142 6.656632 TGGGAAAAACATAAACATGCACTA 57.343 33.333 0.00 0.00 0.00 2.74
2082 2143 5.543507 TGGGAAAAACATAAACATGCACT 57.456 34.783 0.00 0.00 0.00 4.40
2083 2144 5.334028 GCTTGGGAAAAACATAAACATGCAC 60.334 40.000 0.00 0.00 0.00 4.57
2084 2145 4.754114 GCTTGGGAAAAACATAAACATGCA 59.246 37.500 0.00 0.00 0.00 3.96
2085 2146 4.754114 TGCTTGGGAAAAACATAAACATGC 59.246 37.500 0.00 0.00 0.00 4.06
2086 2147 8.545229 TTATGCTTGGGAAAAACATAAACATG 57.455 30.769 0.00 0.00 31.99 3.21
2087 2148 9.382275 GATTATGCTTGGGAAAAACATAAACAT 57.618 29.630 0.00 0.00 36.93 2.71
2088 2149 8.592809 AGATTATGCTTGGGAAAAACATAAACA 58.407 29.630 0.00 0.00 36.93 2.83
2091 2152 8.413229 GCTAGATTATGCTTGGGAAAAACATAA 58.587 33.333 0.00 0.00 37.54 1.90
2092 2153 7.559533 TGCTAGATTATGCTTGGGAAAAACATA 59.440 33.333 0.00 0.00 0.00 2.29
2093 2154 6.380846 TGCTAGATTATGCTTGGGAAAAACAT 59.619 34.615 0.00 0.00 0.00 2.71
2094 2155 5.714333 TGCTAGATTATGCTTGGGAAAAACA 59.286 36.000 0.00 0.00 0.00 2.83
2095 2156 6.207691 TGCTAGATTATGCTTGGGAAAAAC 57.792 37.500 0.00 0.00 0.00 2.43
2096 2157 7.422465 AATGCTAGATTATGCTTGGGAAAAA 57.578 32.000 0.00 0.00 0.00 1.94
2097 2158 7.422465 AAATGCTAGATTATGCTTGGGAAAA 57.578 32.000 0.00 0.00 0.00 2.29
2098 2159 7.093377 ACAAAATGCTAGATTATGCTTGGGAAA 60.093 33.333 0.00 0.00 0.00 3.13
2099 2160 6.380846 ACAAAATGCTAGATTATGCTTGGGAA 59.619 34.615 0.00 0.00 0.00 3.97
2100 2161 5.893255 ACAAAATGCTAGATTATGCTTGGGA 59.107 36.000 0.00 0.00 0.00 4.37
2101 2162 5.981315 CACAAAATGCTAGATTATGCTTGGG 59.019 40.000 0.00 0.00 0.00 4.12
2102 2163 5.981315 CCACAAAATGCTAGATTATGCTTGG 59.019 40.000 0.00 0.00 0.00 3.61
2103 2164 5.981315 CCCACAAAATGCTAGATTATGCTTG 59.019 40.000 0.00 0.00 0.00 4.01
2104 2165 5.452356 GCCCACAAAATGCTAGATTATGCTT 60.452 40.000 0.00 0.00 0.00 3.91
2105 2166 4.038402 GCCCACAAAATGCTAGATTATGCT 59.962 41.667 0.00 0.00 0.00 3.79
2106 2167 4.202141 TGCCCACAAAATGCTAGATTATGC 60.202 41.667 0.00 0.00 0.00 3.14
2107 2168 5.518848 TGCCCACAAAATGCTAGATTATG 57.481 39.130 0.00 0.00 0.00 1.90
2108 2169 5.450412 CGTTGCCCACAAAATGCTAGATTAT 60.450 40.000 0.00 0.00 37.58 1.28
2109 2170 4.142491 CGTTGCCCACAAAATGCTAGATTA 60.142 41.667 0.00 0.00 37.58 1.75
2110 2171 3.367292 CGTTGCCCACAAAATGCTAGATT 60.367 43.478 0.00 0.00 37.58 2.40
2111 2172 2.164219 CGTTGCCCACAAAATGCTAGAT 59.836 45.455 0.00 0.00 37.58 1.98
2112 2173 1.539388 CGTTGCCCACAAAATGCTAGA 59.461 47.619 0.00 0.00 37.58 2.43
2113 2174 1.539388 TCGTTGCCCACAAAATGCTAG 59.461 47.619 0.00 0.00 37.58 3.42
2114 2175 1.610363 TCGTTGCCCACAAAATGCTA 58.390 45.000 0.00 0.00 37.58 3.49
2115 2176 0.749649 TTCGTTGCCCACAAAATGCT 59.250 45.000 0.00 0.00 37.58 3.79
2116 2177 1.576356 TTTCGTTGCCCACAAAATGC 58.424 45.000 0.00 0.00 37.58 3.56
2117 2178 3.620821 ACTTTTTCGTTGCCCACAAAATG 59.379 39.130 0.00 0.00 37.58 2.32
2118 2179 3.867857 ACTTTTTCGTTGCCCACAAAAT 58.132 36.364 0.00 0.00 37.58 1.82
2119 2180 3.320673 ACTTTTTCGTTGCCCACAAAA 57.679 38.095 0.00 0.00 37.58 2.44
2120 2181 3.320673 AACTTTTTCGTTGCCCACAAA 57.679 38.095 0.00 0.00 37.58 2.83
2121 2182 4.451629 TTAACTTTTTCGTTGCCCACAA 57.548 36.364 0.00 0.00 0.00 3.33
2122 2183 4.451629 TTTAACTTTTTCGTTGCCCACA 57.548 36.364 0.00 0.00 0.00 4.17
2123 2184 5.977171 ATTTTAACTTTTTCGTTGCCCAC 57.023 34.783 0.00 0.00 0.00 4.61
2124 2185 6.342111 AGAATTTTAACTTTTTCGTTGCCCA 58.658 32.000 0.00 0.00 0.00 5.36
2125 2186 6.838198 AGAATTTTAACTTTTTCGTTGCCC 57.162 33.333 0.00 0.00 0.00 5.36
2126 2187 7.043920 TCGAAGAATTTTAACTTTTTCGTTGCC 60.044 33.333 15.90 0.00 37.69 4.52
2127 2188 7.823692 TCGAAGAATTTTAACTTTTTCGTTGC 58.176 30.769 15.90 0.00 37.69 4.17
2128 2189 9.974528 GATCGAAGAATTTTAACTTTTTCGTTG 57.025 29.630 15.90 4.06 43.58 4.10
2129 2190 9.177304 GGATCGAAGAATTTTAACTTTTTCGTT 57.823 29.630 15.90 10.49 43.58 3.85
2130 2191 8.347035 TGGATCGAAGAATTTTAACTTTTTCGT 58.653 29.630 15.90 7.55 43.58 3.85
2131 2192 8.722342 TGGATCGAAGAATTTTAACTTTTTCG 57.278 30.769 12.18 12.18 43.58 3.46
2132 2193 9.129209 CCTGGATCGAAGAATTTTAACTTTTTC 57.871 33.333 0.00 0.00 43.58 2.29
2133 2194 8.638873 ACCTGGATCGAAGAATTTTAACTTTTT 58.361 29.630 0.00 0.00 43.58 1.94
2134 2195 8.178313 ACCTGGATCGAAGAATTTTAACTTTT 57.822 30.769 0.00 0.00 43.58 2.27
2135 2196 7.761038 ACCTGGATCGAAGAATTTTAACTTT 57.239 32.000 0.00 0.00 43.58 2.66
2136 2197 7.761038 AACCTGGATCGAAGAATTTTAACTT 57.239 32.000 0.00 0.00 43.58 2.66
2137 2198 8.857694 TTAACCTGGATCGAAGAATTTTAACT 57.142 30.769 0.00 0.00 43.58 2.24
2138 2199 9.902196 TTTTAACCTGGATCGAAGAATTTTAAC 57.098 29.630 0.00 0.00 43.58 2.01
2141 2202 8.638873 ACTTTTTAACCTGGATCGAAGAATTTT 58.361 29.630 0.00 0.00 43.58 1.82
2142 2203 8.178313 ACTTTTTAACCTGGATCGAAGAATTT 57.822 30.769 0.00 0.00 43.58 1.82
2143 2204 7.447238 TGACTTTTTAACCTGGATCGAAGAATT 59.553 33.333 0.00 0.00 43.58 2.17
2144 2205 6.940298 TGACTTTTTAACCTGGATCGAAGAAT 59.060 34.615 0.00 0.00 43.58 2.40
2145 2206 6.292923 TGACTTTTTAACCTGGATCGAAGAA 58.707 36.000 0.00 0.00 43.58 2.52
2146 2207 5.860611 TGACTTTTTAACCTGGATCGAAGA 58.139 37.500 0.00 0.00 45.75 2.87
2147 2208 6.554334 TTGACTTTTTAACCTGGATCGAAG 57.446 37.500 0.00 0.66 0.00 3.79
2148 2209 6.945938 TTTGACTTTTTAACCTGGATCGAA 57.054 33.333 0.00 0.00 0.00 3.71
2149 2210 6.072175 CCATTTGACTTTTTAACCTGGATCGA 60.072 38.462 0.00 0.00 0.00 3.59
2150 2211 6.072175 TCCATTTGACTTTTTAACCTGGATCG 60.072 38.462 0.00 0.00 0.00 3.69
2151 2212 7.090808 GTCCATTTGACTTTTTAACCTGGATC 58.909 38.462 0.00 0.00 41.03 3.36
2152 2213 6.553100 TGTCCATTTGACTTTTTAACCTGGAT 59.447 34.615 0.00 0.00 44.75 3.41
2153 2214 5.894393 TGTCCATTTGACTTTTTAACCTGGA 59.106 36.000 0.00 0.00 44.75 3.86
2154 2215 6.155475 TGTCCATTTGACTTTTTAACCTGG 57.845 37.500 0.00 0.00 44.75 4.45
2155 2216 7.264947 ACTTGTCCATTTGACTTTTTAACCTG 58.735 34.615 0.00 0.00 44.75 4.00
2156 2217 7.418337 ACTTGTCCATTTGACTTTTTAACCT 57.582 32.000 0.00 0.00 44.75 3.50
2157 2218 8.487313 AAACTTGTCCATTTGACTTTTTAACC 57.513 30.769 0.00 0.00 44.75 2.85
2161 2222 9.665719 ACATAAAACTTGTCCATTTGACTTTTT 57.334 25.926 0.00 0.00 44.75 1.94
2163 2224 9.744468 GTACATAAAACTTGTCCATTTGACTTT 57.256 29.630 0.00 0.00 44.75 2.66
2164 2225 8.908903 TGTACATAAAACTTGTCCATTTGACTT 58.091 29.630 0.00 0.00 44.75 3.01
2165 2226 8.458573 TGTACATAAAACTTGTCCATTTGACT 57.541 30.769 0.00 0.00 44.75 3.41
2181 2242 9.542462 GTGTGGCTAGATTTCTATGTACATAAA 57.458 33.333 16.17 11.00 0.00 1.40
2182 2243 8.148351 GGTGTGGCTAGATTTCTATGTACATAA 58.852 37.037 16.17 4.62 0.00 1.90
2183 2244 7.523216 CGGTGTGGCTAGATTTCTATGTACATA 60.523 40.741 14.75 14.75 0.00 2.29
2184 2245 6.525629 GGTGTGGCTAGATTTCTATGTACAT 58.474 40.000 13.93 13.93 0.00 2.29
2185 2246 5.451381 CGGTGTGGCTAGATTTCTATGTACA 60.451 44.000 0.00 0.00 0.00 2.90
2186 2247 4.982916 CGGTGTGGCTAGATTTCTATGTAC 59.017 45.833 0.00 0.00 0.00 2.90
2187 2248 4.891168 TCGGTGTGGCTAGATTTCTATGTA 59.109 41.667 0.00 0.00 0.00 2.29
2188 2249 3.704566 TCGGTGTGGCTAGATTTCTATGT 59.295 43.478 0.00 0.00 0.00 2.29
2189 2250 4.322080 TCGGTGTGGCTAGATTTCTATG 57.678 45.455 0.00 0.00 0.00 2.23
2190 2251 4.321304 CGATCGGTGTGGCTAGATTTCTAT 60.321 45.833 7.38 0.00 0.00 1.98
2191 2252 3.004419 CGATCGGTGTGGCTAGATTTCTA 59.996 47.826 7.38 0.00 0.00 2.10
2192 2253 2.223829 CGATCGGTGTGGCTAGATTTCT 60.224 50.000 7.38 0.00 0.00 2.52
2193 2254 2.128035 CGATCGGTGTGGCTAGATTTC 58.872 52.381 7.38 0.00 0.00 2.17
2194 2255 1.806623 GCGATCGGTGTGGCTAGATTT 60.807 52.381 18.30 0.00 0.00 2.17
2195 2256 0.249489 GCGATCGGTGTGGCTAGATT 60.249 55.000 18.30 0.00 0.00 2.40
2196 2257 1.364171 GCGATCGGTGTGGCTAGAT 59.636 57.895 18.30 0.00 0.00 1.98
2197 2258 1.600511 TTGCGATCGGTGTGGCTAGA 61.601 55.000 18.30 0.00 0.00 2.43
2198 2259 0.739462 TTTGCGATCGGTGTGGCTAG 60.739 55.000 18.30 0.00 0.00 3.42
2199 2260 0.320858 TTTTGCGATCGGTGTGGCTA 60.321 50.000 18.30 0.00 0.00 3.93
2200 2261 1.169661 TTTTTGCGATCGGTGTGGCT 61.170 50.000 18.30 0.00 0.00 4.75
2201 2262 1.284408 TTTTTGCGATCGGTGTGGC 59.716 52.632 18.30 0.00 0.00 5.01
2217 2278 1.404035 GTCGCAGTGGACTTGGTTTTT 59.596 47.619 0.00 0.00 34.09 1.94
2218 2279 1.021968 GTCGCAGTGGACTTGGTTTT 58.978 50.000 0.00 0.00 34.09 2.43
2219 2280 0.107410 TGTCGCAGTGGACTTGGTTT 60.107 50.000 11.48 0.00 37.81 3.27
2220 2281 0.107410 TTGTCGCAGTGGACTTGGTT 60.107 50.000 11.48 0.00 37.81 3.67
2221 2282 0.532862 CTTGTCGCAGTGGACTTGGT 60.533 55.000 11.48 0.00 37.81 3.67
2222 2283 1.845809 GCTTGTCGCAGTGGACTTGG 61.846 60.000 11.48 4.94 37.81 3.61
2223 2284 1.571460 GCTTGTCGCAGTGGACTTG 59.429 57.895 11.48 6.70 37.81 3.16
2224 2285 1.598130 GGCTTGTCGCAGTGGACTT 60.598 57.895 11.48 0.00 41.67 3.01
2225 2286 2.031163 GGCTTGTCGCAGTGGACT 59.969 61.111 11.48 0.00 41.67 3.85
2226 2287 1.672356 ATGGCTTGTCGCAGTGGAC 60.672 57.895 5.16 5.16 41.67 4.02
2227 2288 1.672030 CATGGCTTGTCGCAGTGGA 60.672 57.895 0.00 0.00 41.67 4.02
2228 2289 1.968017 ACATGGCTTGTCGCAGTGG 60.968 57.895 0.00 0.00 41.67 4.00
2229 2290 1.208358 CACATGGCTTGTCGCAGTG 59.792 57.895 2.62 0.00 41.67 3.66
2230 2291 2.620112 GCACATGGCTTGTCGCAGT 61.620 57.895 16.91 0.00 41.67 4.40
2231 2292 2.177531 GCACATGGCTTGTCGCAG 59.822 61.111 16.91 4.40 41.67 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.