Multiple sequence alignment - TraesCS3B01G305700
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G305700 | chr3B | 100.000 | 4281 | 0 | 0 | 1 | 4281 | 491366588 | 491370868 | 0.000000e+00 | 7906.0 |
1 | TraesCS3B01G305700 | chr3B | 83.966 | 237 | 32 | 5 | 3809 | 4042 | 493121873 | 493121640 | 5.570000e-54 | 222.0 |
2 | TraesCS3B01G305700 | chr3B | 100.000 | 60 | 0 | 0 | 1 | 60 | 491362360 | 491362419 | 1.260000e-20 | 111.0 |
3 | TraesCS3B01G305700 | chr3D | 94.479 | 3170 | 100 | 35 | 607 | 3750 | 376813879 | 376816999 | 0.000000e+00 | 4815.0 |
4 | TraesCS3B01G305700 | chr3D | 86.902 | 481 | 49 | 7 | 1 | 472 | 376813344 | 376813819 | 1.050000e-145 | 527.0 |
5 | TraesCS3B01G305700 | chr3D | 84.434 | 212 | 31 | 2 | 3818 | 4027 | 340338391 | 340338180 | 1.560000e-49 | 207.0 |
6 | TraesCS3B01G305700 | chr3D | 96.296 | 81 | 3 | 0 | 522 | 602 | 376813820 | 376813900 | 2.690000e-27 | 134.0 |
7 | TraesCS3B01G305700 | chr3D | 91.011 | 89 | 3 | 2 | 4198 | 4281 | 376819624 | 376819712 | 9.730000e-22 | 115.0 |
8 | TraesCS3B01G305700 | chr3D | 96.000 | 50 | 2 | 0 | 4189 | 4238 | 376819508 | 376819557 | 9.870000e-12 | 82.4 |
9 | TraesCS3B01G305700 | chr3A | 94.877 | 2518 | 90 | 18 | 1015 | 3520 | 501221320 | 501223810 | 0.000000e+00 | 3899.0 |
10 | TraesCS3B01G305700 | chr3A | 88.636 | 572 | 30 | 14 | 377 | 925 | 501220362 | 501220921 | 0.000000e+00 | 664.0 |
11 | TraesCS3B01G305700 | chr3A | 89.205 | 176 | 9 | 7 | 3577 | 3752 | 501224138 | 501224303 | 1.210000e-50 | 211.0 |
12 | TraesCS3B01G305700 | chr3A | 92.157 | 153 | 6 | 2 | 4133 | 4281 | 501224608 | 501224758 | 1.210000e-50 | 211.0 |
13 | TraesCS3B01G305700 | chr7D | 84.884 | 258 | 33 | 5 | 3800 | 4052 | 339118826 | 339118570 | 5.490000e-64 | 255.0 |
14 | TraesCS3B01G305700 | chr5D | 84.746 | 236 | 31 | 5 | 3810 | 4042 | 382871964 | 382871731 | 9.260000e-57 | 231.0 |
15 | TraesCS3B01G305700 | chr7B | 82.946 | 258 | 36 | 7 | 3801 | 4052 | 284149232 | 284148977 | 4.310000e-55 | 226.0 |
16 | TraesCS3B01G305700 | chr7B | 81.743 | 241 | 37 | 7 | 3810 | 4045 | 45843388 | 45843150 | 1.210000e-45 | 195.0 |
17 | TraesCS3B01G305700 | chr7B | 89.583 | 48 | 2 | 3 | 3574 | 3621 | 479780544 | 479780588 | 1.660000e-04 | 58.4 |
18 | TraesCS3B01G305700 | chr1D | 83.966 | 237 | 35 | 3 | 3810 | 4044 | 464601407 | 464601172 | 1.550000e-54 | 224.0 |
19 | TraesCS3B01G305700 | chr6B | 83.544 | 237 | 34 | 5 | 3810 | 4042 | 439062091 | 439062326 | 2.590000e-52 | 217.0 |
20 | TraesCS3B01G305700 | chr6B | 100.000 | 28 | 0 | 0 | 3594 | 3621 | 34926574 | 34926601 | 8.000000e-03 | 52.8 |
21 | TraesCS3B01G305700 | chr2D | 81.481 | 243 | 36 | 9 | 3809 | 4046 | 637678336 | 637678098 | 1.570000e-44 | 191.0 |
22 | TraesCS3B01G305700 | chr6A | 94.286 | 35 | 2 | 0 | 185 | 219 | 421101684 | 421101718 | 2.000000e-03 | 54.7 |
23 | TraesCS3B01G305700 | chr1B | 96.970 | 33 | 0 | 1 | 3594 | 3625 | 509151088 | 509151056 | 2.000000e-03 | 54.7 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G305700 | chr3B | 491366588 | 491370868 | 4280 | False | 7906.00 | 7906 | 100.00000 | 1 | 4281 | 1 | chr3B.!!$F2 | 4280 |
1 | TraesCS3B01G305700 | chr3D | 376813344 | 376819712 | 6368 | False | 1134.68 | 4815 | 92.93760 | 1 | 4281 | 5 | chr3D.!!$F1 | 4280 |
2 | TraesCS3B01G305700 | chr3A | 501220362 | 501224758 | 4396 | False | 1246.25 | 3899 | 91.21875 | 377 | 4281 | 4 | chr3A.!!$F1 | 3904 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
180 | 181 | 0.104304 | AATACCGATGACCAGCGACC | 59.896 | 55.0 | 9.36 | 0.0 | 43.75 | 4.79 | F |
975 | 1033 | 0.107654 | CCCTTCCTTCGCTTCGGATT | 60.108 | 55.0 | 0.00 | 0.0 | 0.00 | 3.01 | F |
978 | 1036 | 0.107848 | TTCCTTCGCTTCGGATTCCC | 60.108 | 55.0 | 0.00 | 0.0 | 0.00 | 3.97 | F |
2752 | 3163 | 0.187117 | TCATGCCCACCTCAACCAAA | 59.813 | 50.0 | 0.00 | 0.0 | 0.00 | 3.28 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1656 | 2028 | 0.458716 | GTGCCTCGACTAACAGAGCC | 60.459 | 60.0 | 0.00 | 0.0 | 33.39 | 4.70 | R |
2834 | 3245 | 0.535780 | CAACAGTTGCAGGGCTCTCA | 60.536 | 55.0 | 0.00 | 0.0 | 0.00 | 3.27 | R |
2948 | 3359 | 2.559668 | CCCTACTACACTGGTCGTTTCA | 59.440 | 50.0 | 0.00 | 0.0 | 0.00 | 2.69 | R |
3996 | 4740 | 0.033601 | TTAAGCATGGCAACCCGGAT | 60.034 | 50.0 | 0.73 | 0.0 | 0.00 | 4.18 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
20 | 21 | 3.194005 | ACAACTGTGACATCCGTTCTT | 57.806 | 42.857 | 0.00 | 0.00 | 0.00 | 2.52 |
47 | 48 | 1.440850 | CGCCAGCGTGACAAACATG | 60.441 | 57.895 | 3.35 | 0.00 | 38.43 | 3.21 |
80 | 81 | 6.469782 | AAACACCATCTTTCACACATCTTT | 57.530 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
81 | 82 | 5.695851 | ACACCATCTTTCACACATCTTTC | 57.304 | 39.130 | 0.00 | 0.00 | 0.00 | 2.62 |
85 | 86 | 6.639686 | CACCATCTTTCACACATCTTTCAAAG | 59.360 | 38.462 | 0.00 | 0.00 | 0.00 | 2.77 |
131 | 132 | 0.673956 | GACAAGACGGGAAGGCCTTC | 60.674 | 60.000 | 33.67 | 33.67 | 38.80 | 3.46 |
150 | 151 | 1.375853 | CTTCCATTTCGATGGCGGCA | 61.376 | 55.000 | 16.34 | 16.34 | 41.43 | 5.69 |
172 | 173 | 2.440539 | ATCGCCTCAATACCGATGAC | 57.559 | 50.000 | 0.00 | 0.00 | 39.89 | 3.06 |
173 | 174 | 0.387929 | TCGCCTCAATACCGATGACC | 59.612 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
176 | 177 | 1.871080 | CCTCAATACCGATGACCAGC | 58.129 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
180 | 181 | 0.104304 | AATACCGATGACCAGCGACC | 59.896 | 55.000 | 9.36 | 0.00 | 43.75 | 4.79 |
185 | 186 | 0.806102 | CGATGACCAGCGACCGAAAT | 60.806 | 55.000 | 0.96 | 0.00 | 43.75 | 2.17 |
226 | 228 | 1.993391 | ACCCTACCATCACCACGGG | 60.993 | 63.158 | 0.00 | 0.00 | 37.70 | 5.28 |
228 | 230 | 1.559065 | CCCTACCATCACCACGGGTT | 61.559 | 60.000 | 0.00 | 0.00 | 36.14 | 4.11 |
229 | 231 | 0.107848 | CCTACCATCACCACGGGTTC | 60.108 | 60.000 | 0.00 | 0.00 | 36.14 | 3.62 |
238 | 240 | 1.277440 | CCACGGGTTCGAAACAACG | 59.723 | 57.895 | 16.38 | 12.74 | 40.11 | 4.10 |
245 | 247 | 1.302366 | GTTCGAAACAACGGGGTCTT | 58.698 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
247 | 249 | 0.464870 | TCGAAACAACGGGGTCTTGA | 59.535 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
250 | 252 | 0.549469 | AAACAACGGGGTCTTGACCT | 59.451 | 50.000 | 17.99 | 0.00 | 0.00 | 3.85 |
285 | 294 | 4.986708 | GGCAAACGAAGGGGCCCA | 62.987 | 66.667 | 27.72 | 0.00 | 40.55 | 5.36 |
289 | 298 | 0.684153 | CAAACGAAGGGGCCCATGAT | 60.684 | 55.000 | 27.72 | 0.62 | 0.00 | 2.45 |
311 | 320 | 3.012959 | TCTCACCAGGGAGAAGGTAGATT | 59.987 | 47.826 | 0.00 | 0.00 | 40.81 | 2.40 |
313 | 322 | 1.840635 | ACCAGGGAGAAGGTAGATTGC | 59.159 | 52.381 | 0.00 | 0.00 | 36.07 | 3.56 |
315 | 324 | 1.141858 | CAGGGAGAAGGTAGATTGCCC | 59.858 | 57.143 | 0.00 | 0.00 | 0.00 | 5.36 |
362 | 371 | 2.360854 | CCCCAAGAGAGGAAGGAGGTAT | 60.361 | 54.545 | 0.00 | 0.00 | 0.00 | 2.73 |
366 | 375 | 4.657969 | CCAAGAGAGGAAGGAGGTATGAAT | 59.342 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
369 | 378 | 6.493189 | AGAGAGGAAGGAGGTATGAATTTC | 57.507 | 41.667 | 0.00 | 0.00 | 0.00 | 2.17 |
372 | 381 | 4.770795 | AGGAAGGAGGTATGAATTTCACG | 58.229 | 43.478 | 0.15 | 0.00 | 0.00 | 4.35 |
373 | 382 | 3.877508 | GGAAGGAGGTATGAATTTCACGG | 59.122 | 47.826 | 0.15 | 0.00 | 0.00 | 4.94 |
374 | 383 | 4.514401 | GAAGGAGGTATGAATTTCACGGT | 58.486 | 43.478 | 0.15 | 0.00 | 0.00 | 4.83 |
375 | 384 | 4.569719 | AGGAGGTATGAATTTCACGGTT | 57.430 | 40.909 | 0.15 | 0.00 | 0.00 | 4.44 |
384 | 393 | 5.688348 | TGAATTTCACGGTTTGTTTTTCG | 57.312 | 34.783 | 0.00 | 0.00 | 0.00 | 3.46 |
390 | 399 | 3.000122 | TCACGGTTTGTTTTTCGTAGACG | 60.000 | 43.478 | 0.00 | 0.00 | 34.32 | 4.18 |
453 | 463 | 1.135527 | GGATCACCGTGATACCGACAA | 59.864 | 52.381 | 14.09 | 0.00 | 37.20 | 3.18 |
479 | 490 | 0.885879 | TATGCTACTGATACCGGCCG | 59.114 | 55.000 | 21.04 | 21.04 | 0.00 | 6.13 |
485 | 496 | 1.069765 | CTGATACCGGCCGCATCTT | 59.930 | 57.895 | 27.83 | 10.74 | 0.00 | 2.40 |
498 | 509 | 1.818060 | CGCATCTTCCCATCAAAACCA | 59.182 | 47.619 | 0.00 | 0.00 | 0.00 | 3.67 |
503 | 514 | 3.221771 | TCTTCCCATCAAAACCAGTGTG | 58.778 | 45.455 | 0.00 | 0.00 | 0.00 | 3.82 |
504 | 515 | 1.993956 | TCCCATCAAAACCAGTGTGG | 58.006 | 50.000 | 0.00 | 0.00 | 45.02 | 4.17 |
508 | 519 | 2.158986 | CCATCAAAACCAGTGTGGCAAA | 60.159 | 45.455 | 0.00 | 0.00 | 42.67 | 3.68 |
510 | 521 | 1.135257 | TCAAAACCAGTGTGGCAAACG | 60.135 | 47.619 | 1.33 | 0.00 | 42.67 | 3.60 |
511 | 522 | 0.459411 | AAAACCAGTGTGGCAAACGC | 60.459 | 50.000 | 1.33 | 0.00 | 42.67 | 4.84 |
512 | 523 | 1.599606 | AAACCAGTGTGGCAAACGCA | 61.600 | 50.000 | 1.33 | 0.00 | 42.67 | 5.24 |
514 | 525 | 2.186160 | CCAGTGTGGCAAACGCAGA | 61.186 | 57.895 | 1.33 | 0.00 | 42.06 | 4.26 |
515 | 526 | 1.009675 | CAGTGTGGCAAACGCAGAC | 60.010 | 57.895 | 1.33 | 0.00 | 42.06 | 3.51 |
516 | 527 | 2.186826 | AGTGTGGCAAACGCAGACC | 61.187 | 57.895 | 1.33 | 0.00 | 42.06 | 3.85 |
519 | 530 | 2.115052 | TGGCAAACGCAGACCCAT | 59.885 | 55.556 | 0.00 | 0.00 | 0.00 | 4.00 |
520 | 531 | 1.971167 | TGGCAAACGCAGACCCATC | 60.971 | 57.895 | 0.00 | 0.00 | 0.00 | 3.51 |
560 | 584 | 0.387239 | CACGCACATGACTCACGAGA | 60.387 | 55.000 | 0.00 | 0.00 | 0.00 | 4.04 |
561 | 585 | 0.528017 | ACGCACATGACTCACGAGAT | 59.472 | 50.000 | 0.00 | 0.00 | 0.00 | 2.75 |
598 | 652 | 1.760086 | CTGCACCCAACCCAACCAA | 60.760 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
599 | 653 | 1.306141 | TGCACCCAACCCAACCAAA | 60.306 | 52.632 | 0.00 | 0.00 | 0.00 | 3.28 |
600 | 654 | 1.145156 | GCACCCAACCCAACCAAAC | 59.855 | 57.895 | 0.00 | 0.00 | 0.00 | 2.93 |
601 | 655 | 1.826709 | CACCCAACCCAACCAAACC | 59.173 | 57.895 | 0.00 | 0.00 | 0.00 | 3.27 |
602 | 656 | 1.383386 | ACCCAACCCAACCAAACCC | 60.383 | 57.895 | 0.00 | 0.00 | 0.00 | 4.11 |
603 | 657 | 1.383248 | CCCAACCCAACCAAACCCA | 60.383 | 57.895 | 0.00 | 0.00 | 0.00 | 4.51 |
604 | 658 | 0.983378 | CCCAACCCAACCAAACCCAA | 60.983 | 55.000 | 0.00 | 0.00 | 0.00 | 4.12 |
605 | 659 | 0.467804 | CCAACCCAACCAAACCCAAG | 59.532 | 55.000 | 0.00 | 0.00 | 0.00 | 3.61 |
606 | 660 | 0.179059 | CAACCCAACCAAACCCAAGC | 60.179 | 55.000 | 0.00 | 0.00 | 0.00 | 4.01 |
607 | 661 | 0.326143 | AACCCAACCAAACCCAAGCT | 60.326 | 50.000 | 0.00 | 0.00 | 0.00 | 3.74 |
608 | 662 | 1.048160 | ACCCAACCAAACCCAAGCTG | 61.048 | 55.000 | 0.00 | 0.00 | 0.00 | 4.24 |
609 | 663 | 0.758685 | CCCAACCAAACCCAAGCTGA | 60.759 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
610 | 664 | 0.389025 | CCAACCAAACCCAAGCTGAC | 59.611 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
611 | 665 | 0.389025 | CAACCAAACCCAAGCTGACC | 59.611 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
612 | 666 | 0.759060 | AACCAAACCCAAGCTGACCC | 60.759 | 55.000 | 0.00 | 0.00 | 0.00 | 4.46 |
613 | 667 | 2.268076 | CCAAACCCAAGCTGACCCG | 61.268 | 63.158 | 0.00 | 0.00 | 0.00 | 5.28 |
614 | 668 | 1.228124 | CAAACCCAAGCTGACCCGA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 5.14 |
615 | 669 | 0.821711 | CAAACCCAAGCTGACCCGAA | 60.822 | 55.000 | 0.00 | 0.00 | 0.00 | 4.30 |
616 | 670 | 0.822121 | AAACCCAAGCTGACCCGAAC | 60.822 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
617 | 671 | 2.359975 | CCCAAGCTGACCCGAACC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 3.62 |
618 | 672 | 2.429930 | CCAAGCTGACCCGAACCA | 59.570 | 61.111 | 0.00 | 0.00 | 0.00 | 3.67 |
619 | 673 | 1.228124 | CCAAGCTGACCCGAACCAA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.67 |
620 | 674 | 1.515521 | CCAAGCTGACCCGAACCAAC | 61.516 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
621 | 675 | 1.228154 | AAGCTGACCCGAACCAACC | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.77 |
622 | 676 | 1.990160 | AAGCTGACCCGAACCAACCA | 61.990 | 55.000 | 0.00 | 0.00 | 0.00 | 3.67 |
700 | 757 | 4.925861 | GGCGATCTCCCTGCTGGC | 62.926 | 72.222 | 3.63 | 0.00 | 0.00 | 4.85 |
718 | 775 | 1.598601 | GGCCGTCAGTAAACAAACGAA | 59.401 | 47.619 | 8.34 | 0.00 | 37.31 | 3.85 |
729 | 786 | 1.298041 | CAAACGAACACGGCCACAC | 60.298 | 57.895 | 2.24 | 0.00 | 0.00 | 3.82 |
730 | 787 | 1.745864 | AAACGAACACGGCCACACA | 60.746 | 52.632 | 2.24 | 0.00 | 0.00 | 3.72 |
775 | 832 | 4.003788 | CCGAAGTCCACCCACGCT | 62.004 | 66.667 | 0.00 | 0.00 | 0.00 | 5.07 |
876 | 934 | 1.684386 | CGCTCCTCTGATTGGCCTCT | 61.684 | 60.000 | 3.32 | 0.00 | 0.00 | 3.69 |
925 | 983 | 1.646189 | CCGCTTTGCTTCTACTCCTC | 58.354 | 55.000 | 0.00 | 0.00 | 0.00 | 3.71 |
926 | 984 | 1.205893 | CCGCTTTGCTTCTACTCCTCT | 59.794 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
927 | 985 | 2.535331 | CGCTTTGCTTCTACTCCTCTC | 58.465 | 52.381 | 0.00 | 0.00 | 0.00 | 3.20 |
928 | 986 | 2.094494 | CGCTTTGCTTCTACTCCTCTCA | 60.094 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
929 | 987 | 3.258228 | GCTTTGCTTCTACTCCTCTCAC | 58.742 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
930 | 988 | 3.056179 | GCTTTGCTTCTACTCCTCTCACT | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 3.41 |
931 | 989 | 4.743493 | CTTTGCTTCTACTCCTCTCACTC | 58.257 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
973 | 1031 | 2.656069 | CCCCTTCCTTCGCTTCGGA | 61.656 | 63.158 | 0.00 | 0.00 | 0.00 | 4.55 |
974 | 1032 | 1.522569 | CCCTTCCTTCGCTTCGGAT | 59.477 | 57.895 | 0.00 | 0.00 | 0.00 | 4.18 |
975 | 1033 | 0.107654 | CCCTTCCTTCGCTTCGGATT | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
976 | 1034 | 1.291132 | CCTTCCTTCGCTTCGGATTC | 58.709 | 55.000 | 0.00 | 0.00 | 0.00 | 2.52 |
977 | 1035 | 1.291132 | CTTCCTTCGCTTCGGATTCC | 58.709 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
978 | 1036 | 0.107848 | TTCCTTCGCTTCGGATTCCC | 60.108 | 55.000 | 0.00 | 0.00 | 0.00 | 3.97 |
979 | 1037 | 0.976073 | TCCTTCGCTTCGGATTCCCT | 60.976 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
980 | 1038 | 0.530870 | CCTTCGCTTCGGATTCCCTC | 60.531 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
981 | 1039 | 0.530870 | CTTCGCTTCGGATTCCCTCC | 60.531 | 60.000 | 0.00 | 0.00 | 41.07 | 4.30 |
982 | 1040 | 1.968050 | TTCGCTTCGGATTCCCTCCC | 61.968 | 60.000 | 0.00 | 0.00 | 41.49 | 4.30 |
985 | 1043 | 0.250510 | GCTTCGGATTCCCTCCCATC | 60.251 | 60.000 | 0.00 | 0.00 | 41.49 | 3.51 |
988 | 1046 | 2.883828 | CGGATTCCCTCCCATCCCG | 61.884 | 68.421 | 0.00 | 0.00 | 41.49 | 5.14 |
1194 | 1565 | 2.552599 | TCTCTCTGTCTGTCTGTCGT | 57.447 | 50.000 | 0.00 | 0.00 | 0.00 | 4.34 |
1196 | 1567 | 2.147150 | CTCTCTGTCTGTCTGTCGTCA | 58.853 | 52.381 | 0.00 | 0.00 | 0.00 | 4.35 |
1208 | 1579 | 1.339610 | CTGTCGTCATCCATCTCCCTC | 59.660 | 57.143 | 0.00 | 0.00 | 0.00 | 4.30 |
1410 | 1782 | 4.722535 | AGGAAGCAGGCCGAGGGA | 62.723 | 66.667 | 0.00 | 0.00 | 0.00 | 4.20 |
1585 | 1957 | 3.391382 | AGGTACGTGCTCTGCCCC | 61.391 | 66.667 | 3.01 | 0.00 | 0.00 | 5.80 |
1611 | 1983 | 1.446792 | CTTCAGATCCACGCACGCT | 60.447 | 57.895 | 0.00 | 0.00 | 0.00 | 5.07 |
1613 | 1985 | 1.877576 | TTCAGATCCACGCACGCTCT | 61.878 | 55.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1627 | 1999 | 1.723870 | GCTCTGCCAATTACTGCCG | 59.276 | 57.895 | 0.00 | 0.00 | 0.00 | 5.69 |
1643 | 2015 | 0.737715 | GCCGAATGTCTTGCTCTCGT | 60.738 | 55.000 | 0.00 | 0.00 | 0.00 | 4.18 |
1644 | 2016 | 1.272781 | CCGAATGTCTTGCTCTCGTC | 58.727 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
1646 | 2018 | 2.181205 | CGAATGTCTTGCTCTCGTCTC | 58.819 | 52.381 | 0.00 | 0.00 | 0.00 | 3.36 |
1647 | 2019 | 2.181205 | GAATGTCTTGCTCTCGTCTCG | 58.819 | 52.381 | 0.00 | 0.00 | 0.00 | 4.04 |
1648 | 2020 | 1.454201 | ATGTCTTGCTCTCGTCTCGA | 58.546 | 50.000 | 0.00 | 0.00 | 0.00 | 4.04 |
1664 | 2036 | 4.021925 | GAGTGCCCCGGCTCTGTT | 62.022 | 66.667 | 14.72 | 0.00 | 43.75 | 3.16 |
1665 | 2037 | 2.606519 | AGTGCCCCGGCTCTGTTA | 60.607 | 61.111 | 9.43 | 0.00 | 42.39 | 2.41 |
1666 | 2038 | 2.125106 | GTGCCCCGGCTCTGTTAG | 60.125 | 66.667 | 7.35 | 0.00 | 42.51 | 2.34 |
1667 | 2039 | 2.606519 | TGCCCCGGCTCTGTTAGT | 60.607 | 61.111 | 7.35 | 0.00 | 42.51 | 2.24 |
1668 | 2040 | 2.187163 | GCCCCGGCTCTGTTAGTC | 59.813 | 66.667 | 0.00 | 0.00 | 38.26 | 2.59 |
1673 | 2045 | 4.816990 | GGCTCTGTTAGTCGAGGC | 57.183 | 61.111 | 0.00 | 0.00 | 43.97 | 4.70 |
1675 | 2047 | 3.037485 | GCTCTGTTAGTCGAGGCAC | 57.963 | 57.895 | 0.00 | 0.00 | 0.00 | 5.01 |
1677 | 2049 | 1.743958 | GCTCTGTTAGTCGAGGCACTA | 59.256 | 52.381 | 0.00 | 0.00 | 41.55 | 2.74 |
1678 | 2050 | 2.359531 | GCTCTGTTAGTCGAGGCACTAT | 59.640 | 50.000 | 0.00 | 0.00 | 41.55 | 2.12 |
1679 | 2051 | 3.181485 | GCTCTGTTAGTCGAGGCACTATT | 60.181 | 47.826 | 0.00 | 0.00 | 41.55 | 1.73 |
1691 | 2063 | 4.681781 | CGAGGCACTATTCAGATTTCACCT | 60.682 | 45.833 | 0.00 | 0.00 | 41.55 | 4.00 |
1697 | 2069 | 6.372659 | GCACTATTCAGATTTCACCTTTGAGA | 59.627 | 38.462 | 0.00 | 0.00 | 31.71 | 3.27 |
1698 | 2070 | 7.066766 | GCACTATTCAGATTTCACCTTTGAGAT | 59.933 | 37.037 | 0.00 | 0.00 | 31.71 | 2.75 |
1700 | 2072 | 8.954350 | ACTATTCAGATTTCACCTTTGAGATTG | 58.046 | 33.333 | 0.00 | 0.00 | 31.71 | 2.67 |
1702 | 2074 | 8.868522 | ATTCAGATTTCACCTTTGAGATTGTA | 57.131 | 30.769 | 0.00 | 0.00 | 31.71 | 2.41 |
1742 | 2133 | 3.380004 | ACTTCAGCGGAACATTTTCACAA | 59.620 | 39.130 | 0.00 | 0.00 | 32.80 | 3.33 |
1811 | 2210 | 6.654582 | TCTCGTGAGATTTGGATCATTTTTGA | 59.345 | 34.615 | 0.00 | 0.00 | 40.84 | 2.69 |
1845 | 2244 | 3.325293 | TGTCTCTGAGCTGAACAATCC | 57.675 | 47.619 | 0.00 | 0.00 | 0.00 | 3.01 |
1904 | 2303 | 3.488778 | CTTCAGGATAAGCATGAGCCT | 57.511 | 47.619 | 0.00 | 0.00 | 33.57 | 4.58 |
1906 | 2305 | 3.721793 | AGGATAAGCATGAGCCTGC | 57.278 | 52.632 | 0.00 | 0.00 | 30.54 | 4.85 |
1912 | 2311 | 3.185155 | GCATGAGCCTGCTGACAC | 58.815 | 61.111 | 0.00 | 0.00 | 39.12 | 3.67 |
1913 | 2312 | 2.747822 | GCATGAGCCTGCTGACACG | 61.748 | 63.158 | 0.00 | 0.00 | 39.12 | 4.49 |
1914 | 2313 | 2.104859 | CATGAGCCTGCTGACACGG | 61.105 | 63.158 | 0.00 | 0.00 | 0.00 | 4.94 |
1991 | 2402 | 0.957395 | CCACTGCCTTGTCGATGCTT | 60.957 | 55.000 | 0.00 | 0.00 | 0.00 | 3.91 |
1995 | 2406 | 0.890542 | TGCCTTGTCGATGCTTGCTT | 60.891 | 50.000 | 0.00 | 0.00 | 0.00 | 3.91 |
2012 | 2423 | 4.320608 | TGCTTCAAGGGAAAATGTCAAC | 57.679 | 40.909 | 0.00 | 0.00 | 31.35 | 3.18 |
2111 | 2522 | 3.174788 | CCGAACCAAAGTAGCGGC | 58.825 | 61.111 | 0.00 | 0.00 | 37.29 | 6.53 |
2209 | 2620 | 5.504010 | CGGTGTACTATATGCAAAGCCAAAG | 60.504 | 44.000 | 0.00 | 0.00 | 0.00 | 2.77 |
2223 | 2634 | 1.405105 | GCCAAAGTCAAGTGAACTGCA | 59.595 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
2720 | 3131 | 1.945662 | GCCACAGCAACTGCAAACG | 60.946 | 57.895 | 4.22 | 0.00 | 45.16 | 3.60 |
2752 | 3163 | 0.187117 | TCATGCCCACCTCAACCAAA | 59.813 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2834 | 3245 | 4.103785 | ACTGCCACATATAAGAATCCTGCT | 59.896 | 41.667 | 0.00 | 0.00 | 0.00 | 4.24 |
2911 | 3322 | 0.246086 | GCGTTTCATCATTTGGGGCA | 59.754 | 50.000 | 0.00 | 0.00 | 0.00 | 5.36 |
3002 | 3413 | 0.981183 | TGGTTGGGAGTATGACGCTT | 59.019 | 50.000 | 0.00 | 0.00 | 0.00 | 4.68 |
3090 | 3501 | 1.593750 | CGAGACTGGCCTGCATAGC | 60.594 | 63.158 | 9.95 | 0.27 | 0.00 | 2.97 |
3122 | 3533 | 3.317993 | GCAGTTGTTGGGTACTTCATTGT | 59.682 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
3234 | 3645 | 6.511416 | CAGATTGGTACAGATCCTTCTACTG | 58.489 | 44.000 | 0.00 | 0.00 | 42.39 | 2.74 |
3266 | 3679 | 6.009589 | TGCTGAAGGGTCAATCTGAAATAAA | 58.990 | 36.000 | 0.00 | 0.00 | 31.88 | 1.40 |
3363 | 3776 | 1.220749 | GGCGATGAACCTGTGCCTA | 59.779 | 57.895 | 0.00 | 0.00 | 42.44 | 3.93 |
3584 | 4269 | 9.488762 | TCATAACTACTCCCTTGATCTAAAAGA | 57.511 | 33.333 | 0.00 | 0.00 | 0.00 | 2.52 |
3621 | 4306 | 7.287512 | AGTTTACGGAGGGAGTATATCTTTC | 57.712 | 40.000 | 0.00 | 0.00 | 0.00 | 2.62 |
3622 | 4307 | 7.068061 | AGTTTACGGAGGGAGTATATCTTTCT | 58.932 | 38.462 | 0.00 | 0.00 | 0.00 | 2.52 |
3653 | 4338 | 3.747099 | ATTGCGTTTCAGATGTAGCAC | 57.253 | 42.857 | 0.00 | 0.00 | 34.13 | 4.40 |
3669 | 4356 | 4.581409 | TGTAGCACCTTCTTTTTAACACCC | 59.419 | 41.667 | 0.00 | 0.00 | 0.00 | 4.61 |
3672 | 4359 | 3.304458 | GCACCTTCTTTTTAACACCCTCG | 60.304 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
3697 | 4384 | 1.877637 | AGCAGTATGTGTGCGAACAA | 58.122 | 45.000 | 0.00 | 0.00 | 46.06 | 2.83 |
3701 | 4388 | 2.095819 | CAGTATGTGTGCGAACAATGCA | 60.096 | 45.455 | 0.00 | 0.00 | 40.70 | 3.96 |
3716 | 4403 | 3.322828 | ACAATGCAACTGGAGAAAGCAAT | 59.677 | 39.130 | 0.00 | 0.00 | 38.85 | 3.56 |
3721 | 4408 | 4.340666 | TGCAACTGGAGAAAGCAATTGTTA | 59.659 | 37.500 | 7.40 | 0.00 | 31.42 | 2.41 |
3752 | 4439 | 2.027377 | TGGAAAATAACGGCCGGAACTA | 60.027 | 45.455 | 31.76 | 15.16 | 0.00 | 2.24 |
3753 | 4440 | 2.610833 | GGAAAATAACGGCCGGAACTAG | 59.389 | 50.000 | 31.76 | 0.00 | 0.00 | 2.57 |
3754 | 4441 | 3.524541 | GAAAATAACGGCCGGAACTAGA | 58.475 | 45.455 | 31.76 | 6.19 | 0.00 | 2.43 |
3755 | 4442 | 2.884894 | AATAACGGCCGGAACTAGAG | 57.115 | 50.000 | 31.76 | 0.00 | 0.00 | 2.43 |
3758 | 4502 | 0.323725 | AACGGCCGGAACTAGAGGTA | 60.324 | 55.000 | 31.76 | 0.00 | 0.00 | 3.08 |
3793 | 4537 | 6.704493 | TGAACAAACCACTACTTGCTAGTAAG | 59.296 | 38.462 | 17.90 | 17.90 | 36.46 | 2.34 |
3795 | 4539 | 7.005709 | ACAAACCACTACTTGCTAGTAAGAT | 57.994 | 36.000 | 25.11 | 12.70 | 36.46 | 2.40 |
3797 | 4541 | 8.591072 | ACAAACCACTACTTGCTAGTAAGATTA | 58.409 | 33.333 | 25.11 | 8.77 | 36.46 | 1.75 |
3799 | 4543 | 9.601217 | AAACCACTACTTGCTAGTAAGATTATG | 57.399 | 33.333 | 25.11 | 16.14 | 36.46 | 1.90 |
3800 | 4544 | 8.307582 | ACCACTACTTGCTAGTAAGATTATGT | 57.692 | 34.615 | 25.11 | 13.60 | 36.46 | 2.29 |
3801 | 4545 | 8.759782 | ACCACTACTTGCTAGTAAGATTATGTT | 58.240 | 33.333 | 25.11 | 5.36 | 36.46 | 2.71 |
3802 | 4546 | 9.601217 | CCACTACTTGCTAGTAAGATTATGTTT | 57.399 | 33.333 | 25.11 | 4.68 | 36.46 | 2.83 |
3814 | 4558 | 9.682465 | AGTAAGATTATGTTTCTTTTAGGACCC | 57.318 | 33.333 | 0.00 | 0.00 | 35.19 | 4.46 |
3815 | 4559 | 7.956328 | AAGATTATGTTTCTTTTAGGACCCC | 57.044 | 36.000 | 0.00 | 0.00 | 29.12 | 4.95 |
3817 | 4561 | 7.475299 | AGATTATGTTTCTTTTAGGACCCCAA | 58.525 | 34.615 | 0.00 | 0.00 | 0.00 | 4.12 |
3818 | 4562 | 8.122481 | AGATTATGTTTCTTTTAGGACCCCAAT | 58.878 | 33.333 | 0.00 | 0.00 | 0.00 | 3.16 |
3819 | 4563 | 9.416284 | GATTATGTTTCTTTTAGGACCCCAATA | 57.584 | 33.333 | 0.00 | 0.00 | 0.00 | 1.90 |
3820 | 4564 | 9.777008 | ATTATGTTTCTTTTAGGACCCCAATAA | 57.223 | 29.630 | 0.00 | 0.00 | 0.00 | 1.40 |
3824 | 4568 | 7.179516 | TGTTTCTTTTAGGACCCCAATAAATCC | 59.820 | 37.037 | 0.00 | 0.00 | 0.00 | 3.01 |
3825 | 4569 | 6.668133 | TCTTTTAGGACCCCAATAAATCCT | 57.332 | 37.500 | 0.00 | 0.00 | 44.03 | 3.24 |
3826 | 4570 | 6.431722 | TCTTTTAGGACCCCAATAAATCCTG | 58.568 | 40.000 | 1.83 | 0.00 | 41.76 | 3.86 |
3828 | 4572 | 6.410222 | TTTAGGACCCCAATAAATCCTGAA | 57.590 | 37.500 | 1.83 | 0.00 | 41.76 | 3.02 |
3829 | 4573 | 4.251103 | AGGACCCCAATAAATCCTGAAC | 57.749 | 45.455 | 0.00 | 0.00 | 40.18 | 3.18 |
3830 | 4574 | 3.596046 | AGGACCCCAATAAATCCTGAACA | 59.404 | 43.478 | 0.00 | 0.00 | 40.18 | 3.18 |
3831 | 4575 | 4.232820 | AGGACCCCAATAAATCCTGAACAT | 59.767 | 41.667 | 0.00 | 0.00 | 40.18 | 2.71 |
3832 | 4576 | 4.962362 | GGACCCCAATAAATCCTGAACATT | 59.038 | 41.667 | 0.00 | 0.00 | 0.00 | 2.71 |
3833 | 4577 | 5.069119 | GGACCCCAATAAATCCTGAACATTC | 59.931 | 44.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3834 | 4578 | 4.644685 | ACCCCAATAAATCCTGAACATTCG | 59.355 | 41.667 | 0.00 | 0.00 | 0.00 | 3.34 |
3835 | 4579 | 4.037923 | CCCCAATAAATCCTGAACATTCGG | 59.962 | 45.833 | 0.00 | 0.00 | 0.00 | 4.30 |
3836 | 4580 | 4.887071 | CCCAATAAATCCTGAACATTCGGA | 59.113 | 41.667 | 1.83 | 5.09 | 35.56 | 4.55 |
3837 | 4581 | 5.536161 | CCCAATAAATCCTGAACATTCGGAT | 59.464 | 40.000 | 1.83 | 7.01 | 40.07 | 4.18 |
3838 | 4582 | 6.040842 | CCCAATAAATCCTGAACATTCGGATT | 59.959 | 38.462 | 17.53 | 17.53 | 44.51 | 3.01 |
3843 | 4587 | 5.757850 | ATCCTGAACATTCGGATTTAAGC | 57.242 | 39.130 | 1.83 | 0.00 | 37.33 | 3.09 |
3844 | 4588 | 4.584874 | TCCTGAACATTCGGATTTAAGCA | 58.415 | 39.130 | 1.83 | 0.00 | 35.56 | 3.91 |
3845 | 4589 | 5.192927 | TCCTGAACATTCGGATTTAAGCAT | 58.807 | 37.500 | 1.83 | 0.00 | 35.56 | 3.79 |
3846 | 4590 | 5.066375 | TCCTGAACATTCGGATTTAAGCATG | 59.934 | 40.000 | 1.83 | 0.00 | 35.56 | 4.06 |
3847 | 4591 | 5.163622 | CCTGAACATTCGGATTTAAGCATGT | 60.164 | 40.000 | 1.83 | 0.00 | 35.56 | 3.21 |
3849 | 4593 | 5.414144 | TGAACATTCGGATTTAAGCATGTCA | 59.586 | 36.000 | 0.00 | 0.00 | 0.00 | 3.58 |
3850 | 4594 | 6.095300 | TGAACATTCGGATTTAAGCATGTCAT | 59.905 | 34.615 | 0.00 | 0.00 | 0.00 | 3.06 |
3851 | 4595 | 6.455360 | ACATTCGGATTTAAGCATGTCATT | 57.545 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3852 | 4596 | 6.498304 | ACATTCGGATTTAAGCATGTCATTC | 58.502 | 36.000 | 0.00 | 0.00 | 0.00 | 2.67 |
3853 | 4597 | 6.319658 | ACATTCGGATTTAAGCATGTCATTCT | 59.680 | 34.615 | 0.00 | 0.00 | 0.00 | 2.40 |
3855 | 4599 | 5.427378 | TCGGATTTAAGCATGTCATTCTGA | 58.573 | 37.500 | 0.00 | 0.00 | 0.00 | 3.27 |
3856 | 4600 | 5.879777 | TCGGATTTAAGCATGTCATTCTGAA | 59.120 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3857 | 4601 | 5.967674 | CGGATTTAAGCATGTCATTCTGAAC | 59.032 | 40.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3894 | 4638 | 4.099266 | AACTTTAGTTGATGCAAAGTGGCA | 59.901 | 37.500 | 0.00 | 0.00 | 40.63 | 4.92 |
3895 | 4639 | 5.395103 | AACTTTAGTTGATGCAAAGTGGCAA | 60.395 | 36.000 | 0.00 | 0.00 | 40.63 | 4.52 |
3896 | 4640 | 7.394280 | AACTTTAGTTGATGCAAAGTGGCAAC | 61.394 | 38.462 | 0.00 | 0.00 | 40.63 | 4.17 |
3919 | 4663 | 6.354130 | ACTTTAGTTGTGAACACATGGTACT | 58.646 | 36.000 | 8.46 | 10.83 | 41.52 | 2.73 |
3920 | 4664 | 6.826741 | ACTTTAGTTGTGAACACATGGTACTT | 59.173 | 34.615 | 12.88 | 2.17 | 41.52 | 2.24 |
3921 | 4665 | 7.338449 | ACTTTAGTTGTGAACACATGGTACTTT | 59.662 | 33.333 | 12.88 | 0.00 | 41.52 | 2.66 |
3922 | 4666 | 5.499139 | AGTTGTGAACACATGGTACTTTG | 57.501 | 39.130 | 8.46 | 0.00 | 41.52 | 2.77 |
3925 | 4669 | 3.880490 | TGTGAACACATGGTACTTTGTCC | 59.120 | 43.478 | 3.39 | 0.00 | 36.21 | 4.02 |
3926 | 4670 | 3.252458 | GTGAACACATGGTACTTTGTCCC | 59.748 | 47.826 | 0.00 | 0.00 | 0.00 | 4.46 |
3927 | 4671 | 3.117851 | TGAACACATGGTACTTTGTCCCA | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 4.37 |
3928 | 4672 | 3.140325 | ACACATGGTACTTTGTCCCAG | 57.860 | 47.619 | 0.00 | 0.00 | 0.00 | 4.45 |
3929 | 4673 | 2.441750 | ACACATGGTACTTTGTCCCAGT | 59.558 | 45.455 | 0.00 | 0.00 | 0.00 | 4.00 |
3930 | 4674 | 3.117663 | ACACATGGTACTTTGTCCCAGTT | 60.118 | 43.478 | 0.00 | 0.00 | 0.00 | 3.16 |
3937 | 4681 | 7.663043 | TGGTACTTTGTCCCAGTTTATTTTT | 57.337 | 32.000 | 0.00 | 0.00 | 0.00 | 1.94 |
3963 | 4707 | 9.935241 | TTTGTTAGAAAATTGCCATATTTGCTA | 57.065 | 25.926 | 0.00 | 0.00 | 35.48 | 3.49 |
3964 | 4708 | 9.935241 | TTGTTAGAAAATTGCCATATTTGCTAA | 57.065 | 25.926 | 10.29 | 10.29 | 40.71 | 3.09 |
3968 | 4712 | 7.267857 | AGAAAATTGCCATATTTGCTAACCTC | 58.732 | 34.615 | 0.00 | 0.00 | 32.69 | 3.85 |
3970 | 4714 | 1.946768 | TGCCATATTTGCTAACCTCGC | 59.053 | 47.619 | 0.00 | 0.00 | 0.00 | 5.03 |
3971 | 4715 | 1.266989 | GCCATATTTGCTAACCTCGCC | 59.733 | 52.381 | 0.00 | 0.00 | 0.00 | 5.54 |
3972 | 4716 | 2.851195 | CCATATTTGCTAACCTCGCCT | 58.149 | 47.619 | 0.00 | 0.00 | 0.00 | 5.52 |
3974 | 4718 | 3.466836 | CATATTTGCTAACCTCGCCTGA | 58.533 | 45.455 | 0.00 | 0.00 | 0.00 | 3.86 |
3975 | 4719 | 2.489938 | ATTTGCTAACCTCGCCTGAA | 57.510 | 45.000 | 0.00 | 0.00 | 0.00 | 3.02 |
3977 | 4721 | 0.685097 | TTGCTAACCTCGCCTGAACT | 59.315 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3978 | 4722 | 1.552578 | TGCTAACCTCGCCTGAACTA | 58.447 | 50.000 | 0.00 | 0.00 | 0.00 | 2.24 |
3979 | 4723 | 1.897133 | TGCTAACCTCGCCTGAACTAA | 59.103 | 47.619 | 0.00 | 0.00 | 0.00 | 2.24 |
3980 | 4724 | 2.300723 | TGCTAACCTCGCCTGAACTAAA | 59.699 | 45.455 | 0.00 | 0.00 | 0.00 | 1.85 |
3982 | 4726 | 3.616802 | GCTAACCTCGCCTGAACTAAAGT | 60.617 | 47.826 | 0.00 | 0.00 | 0.00 | 2.66 |
3983 | 4727 | 3.487120 | AACCTCGCCTGAACTAAAGTT | 57.513 | 42.857 | 0.00 | 0.00 | 41.64 | 2.66 |
3984 | 4728 | 2.767505 | ACCTCGCCTGAACTAAAGTTG | 58.232 | 47.619 | 0.00 | 0.00 | 38.56 | 3.16 |
3985 | 4729 | 1.464997 | CCTCGCCTGAACTAAAGTTGC | 59.535 | 52.381 | 0.00 | 0.00 | 38.56 | 4.17 |
3986 | 4730 | 1.464997 | CTCGCCTGAACTAAAGTTGCC | 59.535 | 52.381 | 0.00 | 0.00 | 38.56 | 4.52 |
3989 | 4733 | 2.414559 | CGCCTGAACTAAAGTTGCCATG | 60.415 | 50.000 | 0.00 | 0.00 | 38.56 | 3.66 |
3991 | 4735 | 3.255642 | GCCTGAACTAAAGTTGCCATGAA | 59.744 | 43.478 | 0.00 | 0.00 | 38.56 | 2.57 |
3992 | 4736 | 4.261994 | GCCTGAACTAAAGTTGCCATGAAA | 60.262 | 41.667 | 0.00 | 0.00 | 38.56 | 2.69 |
3993 | 4737 | 5.738783 | GCCTGAACTAAAGTTGCCATGAAAA | 60.739 | 40.000 | 0.00 | 0.00 | 38.56 | 2.29 |
3994 | 4738 | 5.922544 | CCTGAACTAAAGTTGCCATGAAAAG | 59.077 | 40.000 | 0.00 | 0.00 | 38.56 | 2.27 |
3995 | 4739 | 5.288804 | TGAACTAAAGTTGCCATGAAAAGC | 58.711 | 37.500 | 0.00 | 0.00 | 38.56 | 3.51 |
3996 | 4740 | 4.935352 | ACTAAAGTTGCCATGAAAAGCA | 57.065 | 36.364 | 0.00 | 0.00 | 37.18 | 3.91 |
3998 | 4742 | 5.473039 | ACTAAAGTTGCCATGAAAAGCATC | 58.527 | 37.500 | 0.00 | 0.00 | 39.11 | 3.91 |
3999 | 4743 | 3.323751 | AAGTTGCCATGAAAAGCATCC | 57.676 | 42.857 | 0.00 | 0.00 | 39.11 | 3.51 |
4002 | 4746 | 1.321805 | TGCCATGAAAAGCATCCGGG | 61.322 | 55.000 | 0.00 | 0.00 | 34.15 | 5.73 |
4003 | 4747 | 1.322538 | GCCATGAAAAGCATCCGGGT | 61.323 | 55.000 | 0.00 | 0.00 | 34.15 | 5.28 |
4004 | 4748 | 1.185315 | CCATGAAAAGCATCCGGGTT | 58.815 | 50.000 | 0.00 | 0.00 | 39.32 | 4.11 |
4005 | 4749 | 1.135024 | CCATGAAAAGCATCCGGGTTG | 60.135 | 52.381 | 0.00 | 0.46 | 37.28 | 3.77 |
4007 | 4751 | 1.215382 | GAAAAGCATCCGGGTTGCC | 59.785 | 57.895 | 23.01 | 7.27 | 41.06 | 4.52 |
4008 | 4752 | 1.531739 | GAAAAGCATCCGGGTTGCCA | 61.532 | 55.000 | 23.01 | 0.00 | 41.06 | 4.92 |
4011 | 4755 | 4.211502 | GCATCCGGGTTGCCATGC | 62.212 | 66.667 | 17.45 | 12.43 | 35.23 | 4.06 |
4012 | 4756 | 2.440796 | CATCCGGGTTGCCATGCT | 60.441 | 61.111 | 0.00 | 0.00 | 0.00 | 3.79 |
4013 | 4757 | 2.053865 | CATCCGGGTTGCCATGCTT | 61.054 | 57.895 | 0.00 | 0.00 | 0.00 | 3.91 |
4014 | 4758 | 0.751277 | CATCCGGGTTGCCATGCTTA | 60.751 | 55.000 | 0.00 | 0.00 | 0.00 | 3.09 |
4015 | 4759 | 0.033601 | ATCCGGGTTGCCATGCTTAA | 60.034 | 50.000 | 0.00 | 0.00 | 0.00 | 1.85 |
4016 | 4760 | 0.251386 | TCCGGGTTGCCATGCTTAAA | 60.251 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
4017 | 4761 | 0.605589 | CCGGGTTGCCATGCTTAAAA | 59.394 | 50.000 | 0.00 | 0.00 | 0.00 | 1.52 |
4018 | 4762 | 1.206849 | CCGGGTTGCCATGCTTAAAAT | 59.793 | 47.619 | 0.00 | 0.00 | 0.00 | 1.82 |
4019 | 4763 | 2.539476 | CGGGTTGCCATGCTTAAAATC | 58.461 | 47.619 | 0.00 | 0.00 | 0.00 | 2.17 |
4020 | 4764 | 2.738321 | CGGGTTGCCATGCTTAAAATCC | 60.738 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
4024 | 4768 | 4.154015 | GGTTGCCATGCTTAAAATCCAAAC | 59.846 | 41.667 | 0.00 | 0.00 | 0.00 | 2.93 |
4025 | 4769 | 3.583806 | TGCCATGCTTAAAATCCAAACG | 58.416 | 40.909 | 0.00 | 0.00 | 0.00 | 3.60 |
4026 | 4770 | 3.006323 | TGCCATGCTTAAAATCCAAACGT | 59.994 | 39.130 | 0.00 | 0.00 | 0.00 | 3.99 |
4027 | 4771 | 3.612423 | GCCATGCTTAAAATCCAAACGTC | 59.388 | 43.478 | 0.00 | 0.00 | 0.00 | 4.34 |
4028 | 4772 | 4.618227 | GCCATGCTTAAAATCCAAACGTCT | 60.618 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
4029 | 4773 | 5.392595 | GCCATGCTTAAAATCCAAACGTCTA | 60.393 | 40.000 | 0.00 | 0.00 | 0.00 | 2.59 |
4030 | 4774 | 6.258160 | CCATGCTTAAAATCCAAACGTCTAG | 58.742 | 40.000 | 0.00 | 0.00 | 0.00 | 2.43 |
4032 | 4776 | 5.553123 | TGCTTAAAATCCAAACGTCTAGGA | 58.447 | 37.500 | 6.11 | 6.11 | 35.59 | 2.94 |
4033 | 4777 | 6.177610 | TGCTTAAAATCCAAACGTCTAGGAT | 58.822 | 36.000 | 9.76 | 9.76 | 43.77 | 3.24 |
4042 | 4786 | 8.980481 | ATCCAAACGTCTAGGATTTATCATTT | 57.020 | 30.769 | 9.76 | 0.00 | 39.02 | 2.32 |
4044 | 4788 | 7.223971 | TCCAAACGTCTAGGATTTATCATTTCG | 59.776 | 37.037 | 0.00 | 0.00 | 0.00 | 3.46 |
4093 | 6716 | 6.823689 | AGATTGGTCGTTCATAGCAAAGTTAT | 59.176 | 34.615 | 0.00 | 0.00 | 37.81 | 1.89 |
4159 | 6866 | 6.407202 | AGACTCCAGTATTTTACATGACACC | 58.593 | 40.000 | 0.00 | 0.00 | 0.00 | 4.16 |
4162 | 6869 | 5.172934 | TCCAGTATTTTACATGACACCGAC | 58.827 | 41.667 | 0.00 | 0.00 | 0.00 | 4.79 |
4238 | 7083 | 6.043474 | ACAACAACCAAATACTACTACCTGGA | 59.957 | 38.462 | 0.00 | 0.00 | 0.00 | 3.86 |
4244 | 7201 | 6.271624 | ACCAAATACTACTACCTGGAACTTGT | 59.728 | 38.462 | 0.00 | 0.00 | 0.00 | 3.16 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
16 | 17 | 1.452145 | GCTGGCGTTGTCCCAAAGAA | 61.452 | 55.000 | 0.00 | 0.00 | 30.66 | 2.52 |
34 | 35 | 2.458951 | TCTTTTGCATGTTTGTCACGC | 58.541 | 42.857 | 0.00 | 0.00 | 35.67 | 5.34 |
76 | 77 | 3.890756 | TGCTTCTTGGCATCTTTGAAAGA | 59.109 | 39.130 | 10.39 | 10.39 | 42.69 | 2.52 |
104 | 105 | 2.721425 | TCCCGTCTTGTCCTTGTTTT | 57.279 | 45.000 | 0.00 | 0.00 | 0.00 | 2.43 |
150 | 151 | 4.495422 | GTCATCGGTATTGAGGCGATAAT | 58.505 | 43.478 | 0.00 | 0.00 | 0.00 | 1.28 |
162 | 163 | 1.740285 | GGTCGCTGGTCATCGGTAT | 59.260 | 57.895 | 0.00 | 0.00 | 0.00 | 2.73 |
164 | 165 | 4.129737 | CGGTCGCTGGTCATCGGT | 62.130 | 66.667 | 0.00 | 0.00 | 0.00 | 4.69 |
165 | 166 | 2.829043 | TTTCGGTCGCTGGTCATCGG | 62.829 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
166 | 167 | 0.806102 | ATTTCGGTCGCTGGTCATCG | 60.806 | 55.000 | 0.00 | 0.00 | 0.00 | 3.84 |
172 | 173 | 1.278238 | GTGTAGATTTCGGTCGCTGG | 58.722 | 55.000 | 0.00 | 0.00 | 0.00 | 4.85 |
173 | 174 | 1.135083 | AGGTGTAGATTTCGGTCGCTG | 60.135 | 52.381 | 0.00 | 0.00 | 0.00 | 5.18 |
176 | 177 | 4.741342 | AGTTTAGGTGTAGATTTCGGTCG | 58.259 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
180 | 181 | 8.996271 | AGGTTTTTAGTTTAGGTGTAGATTTCG | 58.004 | 33.333 | 0.00 | 0.00 | 0.00 | 3.46 |
185 | 186 | 7.219322 | GGTGAGGTTTTTAGTTTAGGTGTAGA | 58.781 | 38.462 | 0.00 | 0.00 | 0.00 | 2.59 |
226 | 228 | 1.003223 | CAAGACCCCGTTGTTTCGAAC | 60.003 | 52.381 | 0.00 | 0.00 | 0.00 | 3.95 |
228 | 230 | 0.464870 | TCAAGACCCCGTTGTTTCGA | 59.535 | 50.000 | 0.00 | 0.00 | 0.00 | 3.71 |
229 | 231 | 0.584876 | GTCAAGACCCCGTTGTTTCG | 59.415 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
245 | 247 | 0.178944 | TTGACGGAGGGAAGAGGTCA | 60.179 | 55.000 | 0.00 | 0.00 | 35.97 | 4.02 |
247 | 249 | 0.977395 | CTTTGACGGAGGGAAGAGGT | 59.023 | 55.000 | 0.00 | 0.00 | 0.00 | 3.85 |
250 | 252 | 0.685097 | CCACTTTGACGGAGGGAAGA | 59.315 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
285 | 294 | 2.293452 | ACCTTCTCCCTGGTGAGATCAT | 60.293 | 50.000 | 13.41 | 2.83 | 40.89 | 2.45 |
289 | 298 | 2.000803 | TCTACCTTCTCCCTGGTGAGA | 58.999 | 52.381 | 9.86 | 9.86 | 39.58 | 3.27 |
315 | 324 | 1.689233 | TAGCAGCTAGGGTGTGGGG | 60.689 | 63.158 | 0.00 | 0.00 | 33.19 | 4.96 |
343 | 352 | 3.647636 | TCATACCTCCTTCCTCTCTTGG | 58.352 | 50.000 | 0.00 | 0.00 | 0.00 | 3.61 |
344 | 353 | 5.885449 | ATTCATACCTCCTTCCTCTCTTG | 57.115 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
345 | 354 | 6.445139 | TGAAATTCATACCTCCTTCCTCTCTT | 59.555 | 38.462 | 0.00 | 0.00 | 0.00 | 2.85 |
362 | 371 | 5.162075 | ACGAAAAACAAACCGTGAAATTCA | 58.838 | 33.333 | 0.00 | 0.00 | 33.69 | 2.57 |
366 | 375 | 5.323105 | GTCTACGAAAAACAAACCGTGAAA | 58.677 | 37.500 | 0.00 | 0.00 | 36.58 | 2.69 |
369 | 378 | 3.242059 | ACGTCTACGAAAAACAAACCGTG | 60.242 | 43.478 | 9.86 | 0.00 | 43.02 | 4.94 |
372 | 381 | 5.608206 | CGTCTACGTCTACGAAAAACAAACC | 60.608 | 44.000 | 15.31 | 0.00 | 41.55 | 3.27 |
373 | 382 | 5.349920 | CGTCTACGTCTACGAAAAACAAAC | 58.650 | 41.667 | 15.31 | 0.00 | 41.55 | 2.93 |
374 | 383 | 4.085619 | GCGTCTACGTCTACGAAAAACAAA | 60.086 | 41.667 | 22.31 | 0.00 | 41.55 | 2.83 |
375 | 384 | 3.421888 | GCGTCTACGTCTACGAAAAACAA | 59.578 | 43.478 | 22.31 | 0.00 | 41.55 | 2.83 |
390 | 399 | 2.846039 | TTGATTCGAGAGGCGTCTAC | 57.154 | 50.000 | 9.29 | 2.63 | 41.80 | 2.59 |
453 | 463 | 5.125739 | GCCGGTATCAGTAGCATATTAGAGT | 59.874 | 44.000 | 1.90 | 0.00 | 0.00 | 3.24 |
479 | 490 | 2.827921 | ACTGGTTTTGATGGGAAGATGC | 59.172 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
485 | 496 | 1.993956 | CCACACTGGTTTTGATGGGA | 58.006 | 50.000 | 0.00 | 0.00 | 31.35 | 4.37 |
498 | 509 | 2.186826 | GGTCTGCGTTTGCCACACT | 61.187 | 57.895 | 0.00 | 0.00 | 41.78 | 3.55 |
503 | 514 | 2.700773 | GGATGGGTCTGCGTTTGCC | 61.701 | 63.158 | 0.00 | 0.00 | 41.78 | 4.52 |
504 | 515 | 1.971167 | TGGATGGGTCTGCGTTTGC | 60.971 | 57.895 | 0.00 | 0.00 | 43.20 | 3.68 |
508 | 519 | 4.760047 | GCGTGGATGGGTCTGCGT | 62.760 | 66.667 | 0.00 | 0.00 | 0.00 | 5.24 |
510 | 521 | 3.127533 | GTGCGTGGATGGGTCTGC | 61.128 | 66.667 | 0.00 | 0.00 | 0.00 | 4.26 |
511 | 522 | 0.677731 | AATGTGCGTGGATGGGTCTG | 60.678 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
512 | 523 | 0.038166 | AAATGTGCGTGGATGGGTCT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 3.85 |
514 | 525 | 0.038166 | AGAAATGTGCGTGGATGGGT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 4.51 |
515 | 526 | 1.176527 | AAGAAATGTGCGTGGATGGG | 58.823 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
516 | 527 | 3.302365 | AAAAGAAATGTGCGTGGATGG | 57.698 | 42.857 | 0.00 | 0.00 | 0.00 | 3.51 |
519 | 530 | 5.918011 | GTGATTAAAAAGAAATGTGCGTGGA | 59.082 | 36.000 | 0.00 | 0.00 | 0.00 | 4.02 |
520 | 531 | 5.164196 | CGTGATTAAAAAGAAATGTGCGTGG | 60.164 | 40.000 | 0.00 | 0.00 | 0.00 | 4.94 |
560 | 584 | 0.900182 | TGTCACGCTCAGGTCTCCAT | 60.900 | 55.000 | 0.00 | 0.00 | 0.00 | 3.41 |
561 | 585 | 1.530655 | TGTCACGCTCAGGTCTCCA | 60.531 | 57.895 | 0.00 | 0.00 | 0.00 | 3.86 |
598 | 652 | 1.228154 | GTTCGGGTCAGCTTGGGTT | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 4.11 |
599 | 653 | 2.430367 | GTTCGGGTCAGCTTGGGT | 59.570 | 61.111 | 0.00 | 0.00 | 0.00 | 4.51 |
600 | 654 | 2.359975 | GGTTCGGGTCAGCTTGGG | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.12 |
601 | 655 | 1.228124 | TTGGTTCGGGTCAGCTTGG | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.61 |
602 | 656 | 1.515521 | GGTTGGTTCGGGTCAGCTTG | 61.516 | 60.000 | 0.00 | 0.00 | 0.00 | 4.01 |
603 | 657 | 1.228154 | GGTTGGTTCGGGTCAGCTT | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.74 |
604 | 658 | 2.397413 | CTGGTTGGTTCGGGTCAGCT | 62.397 | 60.000 | 0.00 | 0.00 | 0.00 | 4.24 |
605 | 659 | 1.966451 | CTGGTTGGTTCGGGTCAGC | 60.966 | 63.158 | 0.00 | 0.00 | 0.00 | 4.26 |
606 | 660 | 0.602905 | GTCTGGTTGGTTCGGGTCAG | 60.603 | 60.000 | 0.00 | 0.00 | 0.00 | 3.51 |
607 | 661 | 1.448497 | GTCTGGTTGGTTCGGGTCA | 59.552 | 57.895 | 0.00 | 0.00 | 0.00 | 4.02 |
608 | 662 | 1.302271 | GGTCTGGTTGGTTCGGGTC | 60.302 | 63.158 | 0.00 | 0.00 | 0.00 | 4.46 |
609 | 663 | 2.833957 | GGTCTGGTTGGTTCGGGT | 59.166 | 61.111 | 0.00 | 0.00 | 0.00 | 5.28 |
610 | 664 | 2.358247 | CGGTCTGGTTGGTTCGGG | 60.358 | 66.667 | 0.00 | 0.00 | 0.00 | 5.14 |
611 | 665 | 1.666872 | GACGGTCTGGTTGGTTCGG | 60.667 | 63.158 | 0.00 | 0.00 | 0.00 | 4.30 |
612 | 666 | 0.666577 | GAGACGGTCTGGTTGGTTCG | 60.667 | 60.000 | 16.72 | 0.00 | 0.00 | 3.95 |
613 | 667 | 0.320508 | GGAGACGGTCTGGTTGGTTC | 60.321 | 60.000 | 16.72 | 0.00 | 0.00 | 3.62 |
614 | 668 | 1.752833 | GGAGACGGTCTGGTTGGTT | 59.247 | 57.895 | 16.72 | 0.00 | 0.00 | 3.67 |
615 | 669 | 2.214920 | GGGAGACGGTCTGGTTGGT | 61.215 | 63.158 | 16.72 | 0.00 | 0.00 | 3.67 |
616 | 670 | 2.663196 | GGGAGACGGTCTGGTTGG | 59.337 | 66.667 | 16.72 | 0.00 | 0.00 | 3.77 |
617 | 671 | 2.261671 | CGGGAGACGGTCTGGTTG | 59.738 | 66.667 | 16.72 | 0.00 | 39.42 | 3.77 |
700 | 757 | 3.600346 | GTGTTCGTTTGTTTACTGACGG | 58.400 | 45.455 | 0.00 | 0.00 | 36.27 | 4.79 |
718 | 775 | 1.600636 | CTTGGATGTGTGGCCGTGT | 60.601 | 57.895 | 0.00 | 0.00 | 0.00 | 4.49 |
729 | 786 | 3.118992 | TGAGATCTGGTTCGACTTGGATG | 60.119 | 47.826 | 0.00 | 0.00 | 0.00 | 3.51 |
730 | 787 | 3.099905 | TGAGATCTGGTTCGACTTGGAT | 58.900 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
775 | 832 | 1.064825 | GACAAGTGGGGAAAGAGGGA | 58.935 | 55.000 | 0.00 | 0.00 | 0.00 | 4.20 |
876 | 934 | 3.845781 | AAAGCAGAGTGAAACAGAGGA | 57.154 | 42.857 | 0.00 | 0.00 | 41.43 | 3.71 |
973 | 1031 | 1.770518 | GGACGGGATGGGAGGGAAT | 60.771 | 63.158 | 0.00 | 0.00 | 0.00 | 3.01 |
974 | 1032 | 2.366435 | GGACGGGATGGGAGGGAA | 60.366 | 66.667 | 0.00 | 0.00 | 0.00 | 3.97 |
975 | 1033 | 4.492303 | GGGACGGGATGGGAGGGA | 62.492 | 72.222 | 0.00 | 0.00 | 0.00 | 4.20 |
977 | 1035 | 4.499116 | AGGGGACGGGATGGGAGG | 62.499 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
978 | 1036 | 2.844839 | GAGGGGACGGGATGGGAG | 60.845 | 72.222 | 0.00 | 0.00 | 0.00 | 4.30 |
979 | 1037 | 4.492303 | GGAGGGGACGGGATGGGA | 62.492 | 72.222 | 0.00 | 0.00 | 0.00 | 4.37 |
1013 | 1071 | 2.829003 | TTTTGGGTTGGTGCGCGA | 60.829 | 55.556 | 12.10 | 0.00 | 0.00 | 5.87 |
1171 | 1542 | 3.559655 | CGACAGACAGACAGAGAGATAGG | 59.440 | 52.174 | 0.00 | 0.00 | 0.00 | 2.57 |
1194 | 1565 | 3.076182 | GGTAGTAGGAGGGAGATGGATGA | 59.924 | 52.174 | 0.00 | 0.00 | 0.00 | 2.92 |
1196 | 1567 | 3.072086 | TGGTAGTAGGAGGGAGATGGAT | 58.928 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
1208 | 1579 | 1.217244 | GCGTGGTGGTGGTAGTAGG | 59.783 | 63.158 | 0.00 | 0.00 | 0.00 | 3.18 |
1410 | 1782 | 1.808799 | CTCGAGCGAATGCAGCAGT | 60.809 | 57.895 | 0.00 | 0.00 | 46.23 | 4.40 |
1585 | 1957 | 4.918201 | GGATCTGAAGGCGGGGCG | 62.918 | 72.222 | 0.00 | 0.00 | 0.00 | 6.13 |
1627 | 1999 | 2.159503 | TCGAGACGAGAGCAAGACATTC | 60.160 | 50.000 | 0.00 | 0.00 | 0.00 | 2.67 |
1647 | 2019 | 2.579684 | CTAACAGAGCCGGGGCACTC | 62.580 | 65.000 | 12.97 | 0.21 | 44.88 | 3.51 |
1648 | 2020 | 2.606519 | TAACAGAGCCGGGGCACT | 60.607 | 61.111 | 12.97 | 8.26 | 44.88 | 4.40 |
1649 | 2021 | 2.125106 | CTAACAGAGCCGGGGCAC | 60.125 | 66.667 | 12.97 | 5.66 | 44.88 | 5.01 |
1650 | 2022 | 2.606519 | ACTAACAGAGCCGGGGCA | 60.607 | 61.111 | 12.97 | 0.00 | 44.88 | 5.36 |
1651 | 2023 | 2.187163 | GACTAACAGAGCCGGGGC | 59.813 | 66.667 | 2.18 | 0.18 | 42.33 | 5.80 |
1652 | 2024 | 2.005960 | CTCGACTAACAGAGCCGGGG | 62.006 | 65.000 | 2.18 | 0.00 | 0.00 | 5.73 |
1653 | 2025 | 1.433879 | CTCGACTAACAGAGCCGGG | 59.566 | 63.158 | 2.18 | 0.00 | 0.00 | 5.73 |
1654 | 2026 | 1.433879 | CCTCGACTAACAGAGCCGG | 59.566 | 63.158 | 0.00 | 0.00 | 33.39 | 6.13 |
1655 | 2027 | 1.226717 | GCCTCGACTAACAGAGCCG | 60.227 | 63.158 | 0.00 | 0.00 | 33.39 | 5.52 |
1656 | 2028 | 0.458716 | GTGCCTCGACTAACAGAGCC | 60.459 | 60.000 | 0.00 | 0.00 | 33.39 | 4.70 |
1657 | 2029 | 0.528470 | AGTGCCTCGACTAACAGAGC | 59.472 | 55.000 | 0.00 | 0.00 | 33.39 | 4.09 |
1658 | 2030 | 4.096532 | TGAATAGTGCCTCGACTAACAGAG | 59.903 | 45.833 | 0.00 | 0.00 | 32.19 | 3.35 |
1659 | 2031 | 4.014406 | TGAATAGTGCCTCGACTAACAGA | 58.986 | 43.478 | 0.00 | 0.00 | 32.19 | 3.41 |
1660 | 2032 | 4.096532 | TCTGAATAGTGCCTCGACTAACAG | 59.903 | 45.833 | 0.00 | 0.00 | 37.76 | 3.16 |
1661 | 2033 | 4.014406 | TCTGAATAGTGCCTCGACTAACA | 58.986 | 43.478 | 0.00 | 0.00 | 32.19 | 2.41 |
1662 | 2034 | 4.634184 | TCTGAATAGTGCCTCGACTAAC | 57.366 | 45.455 | 0.00 | 0.00 | 32.19 | 2.34 |
1663 | 2035 | 5.854010 | AATCTGAATAGTGCCTCGACTAA | 57.146 | 39.130 | 0.00 | 0.00 | 32.19 | 2.24 |
1664 | 2036 | 5.359860 | TGAAATCTGAATAGTGCCTCGACTA | 59.640 | 40.000 | 0.00 | 0.00 | 32.97 | 2.59 |
1665 | 2037 | 4.160439 | TGAAATCTGAATAGTGCCTCGACT | 59.840 | 41.667 | 0.00 | 0.00 | 0.00 | 4.18 |
1666 | 2038 | 4.268884 | GTGAAATCTGAATAGTGCCTCGAC | 59.731 | 45.833 | 0.00 | 0.00 | 0.00 | 4.20 |
1667 | 2039 | 4.433615 | GTGAAATCTGAATAGTGCCTCGA | 58.566 | 43.478 | 0.00 | 0.00 | 0.00 | 4.04 |
1668 | 2040 | 3.557595 | GGTGAAATCTGAATAGTGCCTCG | 59.442 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
1669 | 2041 | 4.775236 | AGGTGAAATCTGAATAGTGCCTC | 58.225 | 43.478 | 0.00 | 0.00 | 0.00 | 4.70 |
1670 | 2042 | 4.851639 | AGGTGAAATCTGAATAGTGCCT | 57.148 | 40.909 | 0.00 | 0.00 | 0.00 | 4.75 |
1671 | 2043 | 5.415701 | TCAAAGGTGAAATCTGAATAGTGCC | 59.584 | 40.000 | 0.00 | 0.00 | 0.00 | 5.01 |
1672 | 2044 | 6.372659 | TCTCAAAGGTGAAATCTGAATAGTGC | 59.627 | 38.462 | 0.00 | 0.00 | 31.88 | 4.40 |
1673 | 2045 | 7.912056 | TCTCAAAGGTGAAATCTGAATAGTG | 57.088 | 36.000 | 0.00 | 0.00 | 31.88 | 2.74 |
1674 | 2046 | 8.954350 | CAATCTCAAAGGTGAAATCTGAATAGT | 58.046 | 33.333 | 0.00 | 0.00 | 31.88 | 2.12 |
1675 | 2047 | 8.954350 | ACAATCTCAAAGGTGAAATCTGAATAG | 58.046 | 33.333 | 0.00 | 0.00 | 31.88 | 1.73 |
1676 | 2048 | 8.868522 | ACAATCTCAAAGGTGAAATCTGAATA | 57.131 | 30.769 | 0.00 | 0.00 | 31.88 | 1.75 |
1677 | 2049 | 7.771927 | ACAATCTCAAAGGTGAAATCTGAAT | 57.228 | 32.000 | 0.00 | 0.00 | 31.88 | 2.57 |
1678 | 2050 | 7.939039 | ACTACAATCTCAAAGGTGAAATCTGAA | 59.061 | 33.333 | 0.00 | 0.00 | 31.88 | 3.02 |
1679 | 2051 | 7.388776 | CACTACAATCTCAAAGGTGAAATCTGA | 59.611 | 37.037 | 0.00 | 0.00 | 31.88 | 3.27 |
1691 | 2063 | 5.705441 | CCTTAAGCACCACTACAATCTCAAA | 59.295 | 40.000 | 0.00 | 0.00 | 0.00 | 2.69 |
1697 | 2069 | 4.910458 | ACTCCTTAAGCACCACTACAAT | 57.090 | 40.909 | 0.00 | 0.00 | 0.00 | 2.71 |
1698 | 2070 | 4.699925 | AACTCCTTAAGCACCACTACAA | 57.300 | 40.909 | 0.00 | 0.00 | 0.00 | 2.41 |
1700 | 2072 | 5.402997 | AGTAACTCCTTAAGCACCACTAC | 57.597 | 43.478 | 0.00 | 0.00 | 0.00 | 2.73 |
1702 | 2074 | 4.347000 | TGAAGTAACTCCTTAAGCACCACT | 59.653 | 41.667 | 0.00 | 0.00 | 0.00 | 4.00 |
1742 | 2133 | 5.970023 | CGTACGTAGTTTAAGAATAGCAGCT | 59.030 | 40.000 | 7.22 | 0.00 | 37.78 | 4.24 |
1811 | 2210 | 7.388224 | CAGCTCAGAGACATATTCTTAATGCAT | 59.612 | 37.037 | 0.00 | 0.00 | 33.22 | 3.96 |
1906 | 2305 | 4.374702 | GTTGCTGCGCCGTGTCAG | 62.375 | 66.667 | 4.18 | 0.00 | 0.00 | 3.51 |
1907 | 2306 | 4.908687 | AGTTGCTGCGCCGTGTCA | 62.909 | 61.111 | 4.18 | 0.00 | 0.00 | 3.58 |
1908 | 2307 | 4.374702 | CAGTTGCTGCGCCGTGTC | 62.375 | 66.667 | 4.18 | 0.00 | 0.00 | 3.67 |
1914 | 2313 | 4.283403 | TTTGGCCAGTTGCTGCGC | 62.283 | 61.111 | 5.11 | 0.00 | 40.92 | 6.09 |
1991 | 2402 | 3.243367 | CGTTGACATTTTCCCTTGAAGCA | 60.243 | 43.478 | 0.00 | 0.00 | 0.00 | 3.91 |
1995 | 2406 | 4.393834 | TGATCGTTGACATTTTCCCTTGA | 58.606 | 39.130 | 0.00 | 0.00 | 0.00 | 3.02 |
2012 | 2423 | 1.267235 | GCGAATTGTGTGCTCTGATCG | 60.267 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2111 | 2522 | 5.050490 | ACTAGTTGCTGCAGAATATAACCG | 58.950 | 41.667 | 20.43 | 9.79 | 0.00 | 4.44 |
2209 | 2620 | 2.826428 | TCTCTGTGCAGTTCACTTGAC | 58.174 | 47.619 | 0.00 | 0.00 | 45.81 | 3.18 |
2223 | 2634 | 0.748450 | TCGGACGGTTTGTTCTCTGT | 59.252 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
2411 | 2822 | 4.908687 | TGCTGTTGCGCGACAGGT | 62.909 | 61.111 | 43.42 | 0.00 | 45.59 | 4.00 |
2720 | 3131 | 2.516460 | CATGAGGCCTGGCTCTGC | 60.516 | 66.667 | 12.00 | 1.03 | 0.00 | 4.26 |
2752 | 3163 | 4.208403 | TGCAGTGGCTGGGCTTGT | 62.208 | 61.111 | 0.00 | 0.00 | 41.91 | 3.16 |
2808 | 3219 | 5.237996 | CAGGATTCTTATATGTGGCAGTGTG | 59.762 | 44.000 | 0.00 | 0.00 | 0.00 | 3.82 |
2834 | 3245 | 0.535780 | CAACAGTTGCAGGGCTCTCA | 60.536 | 55.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2911 | 3322 | 9.976511 | CATATGGATTCTTATGCAAGATTTGTT | 57.023 | 29.630 | 0.00 | 0.00 | 40.47 | 2.83 |
2948 | 3359 | 2.559668 | CCCTACTACACTGGTCGTTTCA | 59.440 | 50.000 | 0.00 | 0.00 | 0.00 | 2.69 |
3090 | 3501 | 0.387622 | CAACAACTGCCCATTCTGCG | 60.388 | 55.000 | 0.00 | 0.00 | 0.00 | 5.18 |
3122 | 3533 | 8.472007 | AGTCATGGAAATAAGTTTTGTGGTAA | 57.528 | 30.769 | 0.00 | 0.00 | 0.00 | 2.85 |
3363 | 3776 | 8.932945 | AAACTCGTCATATATTCATATCGCAT | 57.067 | 30.769 | 0.00 | 0.00 | 0.00 | 4.73 |
3549 | 4205 | 6.909550 | AGGGAGTAGTTATGAGCTATTGAG | 57.090 | 41.667 | 0.00 | 0.00 | 0.00 | 3.02 |
3584 | 4269 | 8.103305 | TCCCTCCGTAAACTAATACTATACGAT | 58.897 | 37.037 | 5.32 | 0.00 | 41.21 | 3.73 |
3587 | 4272 | 8.628630 | ACTCCCTCCGTAAACTAATACTATAC | 57.371 | 38.462 | 0.00 | 0.00 | 0.00 | 1.47 |
3591 | 4276 | 9.460019 | GATATACTCCCTCCGTAAACTAATACT | 57.540 | 37.037 | 0.00 | 0.00 | 0.00 | 2.12 |
3604 | 4289 | 7.070821 | TGGTTTACAGAAAGATATACTCCCTCC | 59.929 | 40.741 | 0.00 | 0.00 | 0.00 | 4.30 |
3621 | 4306 | 6.607689 | TCTGAAACGCAATTATGGTTTACAG | 58.392 | 36.000 | 13.69 | 13.69 | 33.17 | 2.74 |
3622 | 4307 | 6.561737 | TCTGAAACGCAATTATGGTTTACA | 57.438 | 33.333 | 1.96 | 0.00 | 33.17 | 2.41 |
3653 | 4338 | 3.746940 | TCCGAGGGTGTTAAAAAGAAGG | 58.253 | 45.455 | 0.00 | 0.00 | 0.00 | 3.46 |
3669 | 4356 | 3.246226 | GCACACATACTGCTTATTCCGAG | 59.754 | 47.826 | 0.00 | 0.00 | 0.00 | 4.63 |
3672 | 4359 | 3.194861 | TCGCACACATACTGCTTATTCC | 58.805 | 45.455 | 0.00 | 0.00 | 32.03 | 3.01 |
3697 | 4384 | 3.322828 | ACAATTGCTTTCTCCAGTTGCAT | 59.677 | 39.130 | 5.05 | 0.00 | 34.46 | 3.96 |
3701 | 4388 | 5.594317 | ACAGTAACAATTGCTTTCTCCAGTT | 59.406 | 36.000 | 5.05 | 0.00 | 0.00 | 3.16 |
3716 | 4403 | 9.239002 | CGTTATTTTCCAAAATCACAGTAACAA | 57.761 | 29.630 | 0.45 | 0.00 | 39.24 | 2.83 |
3721 | 4408 | 5.227152 | GCCGTTATTTTCCAAAATCACAGT | 58.773 | 37.500 | 0.45 | 0.00 | 39.24 | 3.55 |
3752 | 4439 | 7.039270 | GGTTTGTTCAACATTTTTGTACCTCT | 58.961 | 34.615 | 0.00 | 0.00 | 37.07 | 3.69 |
3753 | 4440 | 6.814146 | TGGTTTGTTCAACATTTTTGTACCTC | 59.186 | 34.615 | 0.00 | 0.00 | 37.07 | 3.85 |
3754 | 4441 | 6.592220 | GTGGTTTGTTCAACATTTTTGTACCT | 59.408 | 34.615 | 0.00 | 0.00 | 37.07 | 3.08 |
3755 | 4442 | 6.592220 | AGTGGTTTGTTCAACATTTTTGTACC | 59.408 | 34.615 | 0.00 | 0.00 | 37.07 | 3.34 |
3758 | 4502 | 7.382898 | AGTAGTGGTTTGTTCAACATTTTTGT | 58.617 | 30.769 | 0.00 | 0.00 | 37.07 | 2.83 |
3793 | 4537 | 7.712204 | TTGGGGTCCTAAAAGAAACATAATC | 57.288 | 36.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3795 | 4539 | 9.603189 | TTTATTGGGGTCCTAAAAGAAACATAA | 57.397 | 29.630 | 0.00 | 0.00 | 0.00 | 1.90 |
3797 | 4541 | 8.679344 | ATTTATTGGGGTCCTAAAAGAAACAT | 57.321 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
3799 | 4543 | 7.399191 | AGGATTTATTGGGGTCCTAAAAGAAAC | 59.601 | 37.037 | 0.00 | 0.00 | 39.25 | 2.78 |
3800 | 4544 | 7.398904 | CAGGATTTATTGGGGTCCTAAAAGAAA | 59.601 | 37.037 | 0.00 | 0.00 | 39.01 | 2.52 |
3801 | 4545 | 6.895204 | CAGGATTTATTGGGGTCCTAAAAGAA | 59.105 | 38.462 | 0.00 | 0.00 | 39.01 | 2.52 |
3802 | 4546 | 6.218730 | TCAGGATTTATTGGGGTCCTAAAAGA | 59.781 | 38.462 | 0.00 | 0.00 | 39.01 | 2.52 |
3803 | 4547 | 6.431722 | TCAGGATTTATTGGGGTCCTAAAAG | 58.568 | 40.000 | 0.00 | 0.00 | 39.01 | 2.27 |
3804 | 4548 | 6.410222 | TCAGGATTTATTGGGGTCCTAAAA | 57.590 | 37.500 | 0.00 | 0.00 | 39.01 | 1.52 |
3806 | 4550 | 5.254267 | TGTTCAGGATTTATTGGGGTCCTAA | 59.746 | 40.000 | 0.00 | 0.00 | 39.01 | 2.69 |
3807 | 4551 | 4.791334 | TGTTCAGGATTTATTGGGGTCCTA | 59.209 | 41.667 | 0.00 | 0.00 | 39.01 | 2.94 |
3808 | 4552 | 3.596046 | TGTTCAGGATTTATTGGGGTCCT | 59.404 | 43.478 | 0.00 | 0.00 | 41.65 | 3.85 |
3810 | 4554 | 5.221048 | CGAATGTTCAGGATTTATTGGGGTC | 60.221 | 44.000 | 0.00 | 0.00 | 0.00 | 4.46 |
3811 | 4555 | 4.644685 | CGAATGTTCAGGATTTATTGGGGT | 59.355 | 41.667 | 0.00 | 0.00 | 0.00 | 4.95 |
3814 | 4558 | 6.639632 | ATCCGAATGTTCAGGATTTATTGG | 57.360 | 37.500 | 10.99 | 0.00 | 37.33 | 3.16 |
3817 | 4561 | 8.352942 | GCTTAAATCCGAATGTTCAGGATTTAT | 58.647 | 33.333 | 27.94 | 18.60 | 46.57 | 1.40 |
3818 | 4562 | 7.338196 | TGCTTAAATCCGAATGTTCAGGATTTA | 59.662 | 33.333 | 26.15 | 26.15 | 46.28 | 1.40 |
3820 | 4564 | 5.652014 | TGCTTAAATCCGAATGTTCAGGATT | 59.348 | 36.000 | 17.88 | 17.88 | 44.51 | 3.01 |
3824 | 4568 | 5.883661 | ACATGCTTAAATCCGAATGTTCAG | 58.116 | 37.500 | 0.00 | 0.00 | 0.00 | 3.02 |
3825 | 4569 | 5.414144 | TGACATGCTTAAATCCGAATGTTCA | 59.586 | 36.000 | 0.00 | 0.00 | 0.00 | 3.18 |
3826 | 4570 | 5.879237 | TGACATGCTTAAATCCGAATGTTC | 58.121 | 37.500 | 0.00 | 0.00 | 0.00 | 3.18 |
3828 | 4572 | 6.319658 | AGAATGACATGCTTAAATCCGAATGT | 59.680 | 34.615 | 0.00 | 0.00 | 0.00 | 2.71 |
3829 | 4573 | 6.635641 | CAGAATGACATGCTTAAATCCGAATG | 59.364 | 38.462 | 0.00 | 0.00 | 39.69 | 2.67 |
3830 | 4574 | 6.543465 | TCAGAATGACATGCTTAAATCCGAAT | 59.457 | 34.615 | 0.00 | 0.00 | 42.56 | 3.34 |
3831 | 4575 | 5.879777 | TCAGAATGACATGCTTAAATCCGAA | 59.120 | 36.000 | 0.00 | 0.00 | 42.56 | 4.30 |
3832 | 4576 | 5.427378 | TCAGAATGACATGCTTAAATCCGA | 58.573 | 37.500 | 0.00 | 0.00 | 42.56 | 4.55 |
3833 | 4577 | 5.739752 | TCAGAATGACATGCTTAAATCCG | 57.260 | 39.130 | 0.00 | 0.00 | 42.56 | 4.18 |
3869 | 4613 | 8.297290 | TGCCACTTTGCATCAACTAAAGTTGT | 62.297 | 38.462 | 19.45 | 7.25 | 44.59 | 3.32 |
3871 | 4615 | 4.099266 | TGCCACTTTGCATCAACTAAAGTT | 59.901 | 37.500 | 0.00 | 0.00 | 41.30 | 2.66 |
3872 | 4616 | 3.636300 | TGCCACTTTGCATCAACTAAAGT | 59.364 | 39.130 | 0.00 | 0.00 | 43.30 | 2.66 |
3874 | 4618 | 4.099266 | AGTTGCCACTTTGCATCAACTAAA | 59.901 | 37.500 | 4.36 | 0.00 | 43.60 | 1.85 |
3875 | 4619 | 3.636300 | AGTTGCCACTTTGCATCAACTAA | 59.364 | 39.130 | 4.36 | 0.00 | 43.60 | 2.24 |
3876 | 4620 | 3.221771 | AGTTGCCACTTTGCATCAACTA | 58.778 | 40.909 | 4.36 | 0.00 | 43.60 | 2.24 |
3877 | 4621 | 2.034124 | AGTTGCCACTTTGCATCAACT | 58.966 | 42.857 | 0.00 | 0.00 | 41.70 | 3.16 |
3878 | 4622 | 2.514205 | AGTTGCCACTTTGCATCAAC | 57.486 | 45.000 | 0.00 | 0.00 | 41.70 | 3.18 |
3894 | 4638 | 6.826741 | AGTACCATGTGTTCACAACTAAAGTT | 59.173 | 34.615 | 9.68 | 0.00 | 39.12 | 2.66 |
3895 | 4639 | 6.354130 | AGTACCATGTGTTCACAACTAAAGT | 58.646 | 36.000 | 9.68 | 4.54 | 0.00 | 2.66 |
3896 | 4640 | 6.861065 | AGTACCATGTGTTCACAACTAAAG | 57.139 | 37.500 | 9.68 | 0.00 | 0.00 | 1.85 |
3897 | 4641 | 7.121463 | ACAAAGTACCATGTGTTCACAACTAAA | 59.879 | 33.333 | 9.68 | 0.00 | 0.00 | 1.85 |
3898 | 4642 | 6.600032 | ACAAAGTACCATGTGTTCACAACTAA | 59.400 | 34.615 | 9.68 | 0.00 | 0.00 | 2.24 |
3899 | 4643 | 6.116806 | ACAAAGTACCATGTGTTCACAACTA | 58.883 | 36.000 | 9.68 | 0.00 | 0.00 | 2.24 |
3900 | 4644 | 4.947388 | ACAAAGTACCATGTGTTCACAACT | 59.053 | 37.500 | 9.68 | 6.04 | 0.00 | 3.16 |
3901 | 4645 | 5.243426 | ACAAAGTACCATGTGTTCACAAC | 57.757 | 39.130 | 9.68 | 3.92 | 0.00 | 3.32 |
3902 | 4646 | 4.336993 | GGACAAAGTACCATGTGTTCACAA | 59.663 | 41.667 | 9.68 | 0.00 | 0.00 | 3.33 |
3903 | 4647 | 3.880490 | GGACAAAGTACCATGTGTTCACA | 59.120 | 43.478 | 8.09 | 8.09 | 0.00 | 3.58 |
3904 | 4648 | 3.252458 | GGGACAAAGTACCATGTGTTCAC | 59.748 | 47.826 | 5.92 | 0.00 | 36.34 | 3.18 |
3905 | 4649 | 3.117851 | TGGGACAAAGTACCATGTGTTCA | 60.118 | 43.478 | 5.92 | 0.26 | 42.36 | 3.18 |
3906 | 4650 | 3.482436 | TGGGACAAAGTACCATGTGTTC | 58.518 | 45.455 | 5.92 | 0.00 | 42.36 | 3.18 |
3907 | 4651 | 3.117663 | ACTGGGACAAAGTACCATGTGTT | 60.118 | 43.478 | 0.78 | 0.00 | 46.56 | 3.32 |
3908 | 4652 | 2.441750 | ACTGGGACAAAGTACCATGTGT | 59.558 | 45.455 | 0.78 | 0.00 | 46.56 | 3.72 |
3910 | 4654 | 3.876309 | AACTGGGACAAAGTACCATGT | 57.124 | 42.857 | 0.78 | 1.04 | 46.56 | 3.21 |
3911 | 4655 | 6.834168 | AATAAACTGGGACAAAGTACCATG | 57.166 | 37.500 | 0.78 | 0.00 | 46.56 | 3.66 |
3913 | 4657 | 7.663043 | AAAAATAAACTGGGACAAAGTACCA | 57.337 | 32.000 | 0.45 | 0.45 | 45.48 | 3.25 |
3937 | 4681 | 8.845413 | AGCAAATATGGCAATTTTCTAACAAA | 57.155 | 26.923 | 0.00 | 0.00 | 0.00 | 2.83 |
3938 | 4682 | 9.935241 | TTAGCAAATATGGCAATTTTCTAACAA | 57.065 | 25.926 | 15.60 | 4.97 | 32.95 | 2.83 |
3939 | 4683 | 9.364989 | GTTAGCAAATATGGCAATTTTCTAACA | 57.635 | 29.630 | 27.29 | 12.25 | 45.15 | 2.41 |
3940 | 4684 | 8.817100 | GGTTAGCAAATATGGCAATTTTCTAAC | 58.183 | 33.333 | 26.06 | 26.06 | 45.12 | 2.34 |
3941 | 4685 | 8.757877 | AGGTTAGCAAATATGGCAATTTTCTAA | 58.242 | 29.630 | 15.60 | 15.60 | 34.41 | 2.10 |
3942 | 4686 | 8.305046 | AGGTTAGCAAATATGGCAATTTTCTA | 57.695 | 30.769 | 0.00 | 1.30 | 0.00 | 2.10 |
3943 | 4687 | 7.186570 | AGGTTAGCAAATATGGCAATTTTCT | 57.813 | 32.000 | 0.00 | 2.25 | 0.00 | 2.52 |
3944 | 4688 | 6.198966 | CGAGGTTAGCAAATATGGCAATTTTC | 59.801 | 38.462 | 0.00 | 0.00 | 0.00 | 2.29 |
3945 | 4689 | 6.042143 | CGAGGTTAGCAAATATGGCAATTTT | 58.958 | 36.000 | 0.00 | 0.00 | 0.00 | 1.82 |
3947 | 4691 | 4.499696 | GCGAGGTTAGCAAATATGGCAATT | 60.500 | 41.667 | 0.00 | 0.00 | 34.19 | 2.32 |
3948 | 4692 | 3.004734 | GCGAGGTTAGCAAATATGGCAAT | 59.995 | 43.478 | 0.00 | 0.00 | 34.19 | 3.56 |
3949 | 4693 | 2.357637 | GCGAGGTTAGCAAATATGGCAA | 59.642 | 45.455 | 0.00 | 0.00 | 34.19 | 4.52 |
3950 | 4694 | 1.946768 | GCGAGGTTAGCAAATATGGCA | 59.053 | 47.619 | 0.00 | 0.00 | 34.19 | 4.92 |
3951 | 4695 | 1.266989 | GGCGAGGTTAGCAAATATGGC | 59.733 | 52.381 | 0.00 | 0.00 | 36.08 | 4.40 |
3952 | 4696 | 2.549754 | CAGGCGAGGTTAGCAAATATGG | 59.450 | 50.000 | 0.00 | 0.00 | 36.08 | 2.74 |
3953 | 4697 | 3.466836 | TCAGGCGAGGTTAGCAAATATG | 58.533 | 45.455 | 0.00 | 0.00 | 36.08 | 1.78 |
3954 | 4698 | 3.838244 | TCAGGCGAGGTTAGCAAATAT | 57.162 | 42.857 | 0.00 | 0.00 | 36.08 | 1.28 |
3955 | 4699 | 3.055385 | AGTTCAGGCGAGGTTAGCAAATA | 60.055 | 43.478 | 0.00 | 0.00 | 36.08 | 1.40 |
3956 | 4700 | 2.084546 | GTTCAGGCGAGGTTAGCAAAT | 58.915 | 47.619 | 0.00 | 0.00 | 36.08 | 2.32 |
3957 | 4701 | 1.071699 | AGTTCAGGCGAGGTTAGCAAA | 59.928 | 47.619 | 0.00 | 0.00 | 36.08 | 3.68 |
3958 | 4702 | 0.685097 | AGTTCAGGCGAGGTTAGCAA | 59.315 | 50.000 | 0.00 | 0.00 | 36.08 | 3.91 |
3959 | 4703 | 1.552578 | TAGTTCAGGCGAGGTTAGCA | 58.447 | 50.000 | 0.00 | 0.00 | 36.08 | 3.49 |
3960 | 4704 | 2.667473 | TTAGTTCAGGCGAGGTTAGC | 57.333 | 50.000 | 0.00 | 0.00 | 0.00 | 3.09 |
3963 | 4707 | 3.139077 | CAACTTTAGTTCAGGCGAGGTT | 58.861 | 45.455 | 0.00 | 0.00 | 35.83 | 3.50 |
3964 | 4708 | 2.767505 | CAACTTTAGTTCAGGCGAGGT | 58.232 | 47.619 | 0.00 | 0.00 | 35.83 | 3.85 |
3965 | 4709 | 1.464997 | GCAACTTTAGTTCAGGCGAGG | 59.535 | 52.381 | 0.00 | 0.00 | 35.83 | 4.63 |
3968 | 4712 | 1.234821 | TGGCAACTTTAGTTCAGGCG | 58.765 | 50.000 | 0.00 | 0.00 | 35.83 | 5.52 |
3970 | 4714 | 5.452078 | TTTCATGGCAACTTTAGTTCAGG | 57.548 | 39.130 | 0.00 | 0.00 | 35.83 | 3.86 |
3971 | 4715 | 5.403466 | GCTTTTCATGGCAACTTTAGTTCAG | 59.597 | 40.000 | 0.00 | 0.00 | 35.83 | 3.02 |
3972 | 4716 | 5.163468 | TGCTTTTCATGGCAACTTTAGTTCA | 60.163 | 36.000 | 0.00 | 0.00 | 35.83 | 3.18 |
3974 | 4718 | 5.275067 | TGCTTTTCATGGCAACTTTAGTT | 57.725 | 34.783 | 0.00 | 0.00 | 39.12 | 2.24 |
3975 | 4719 | 4.935352 | TGCTTTTCATGGCAACTTTAGT | 57.065 | 36.364 | 0.00 | 0.00 | 35.40 | 2.24 |
3977 | 4721 | 4.617995 | CGGATGCTTTTCATGGCAACTTTA | 60.618 | 41.667 | 0.00 | 0.00 | 41.90 | 1.85 |
3978 | 4722 | 3.667360 | GGATGCTTTTCATGGCAACTTT | 58.333 | 40.909 | 0.00 | 0.00 | 41.90 | 2.66 |
3979 | 4723 | 2.353011 | CGGATGCTTTTCATGGCAACTT | 60.353 | 45.455 | 0.00 | 0.00 | 41.90 | 2.66 |
3980 | 4724 | 1.203052 | CGGATGCTTTTCATGGCAACT | 59.797 | 47.619 | 0.00 | 0.00 | 41.90 | 3.16 |
3982 | 4726 | 0.531657 | CCGGATGCTTTTCATGGCAA | 59.468 | 50.000 | 0.00 | 0.00 | 41.90 | 4.52 |
3983 | 4727 | 1.321805 | CCCGGATGCTTTTCATGGCA | 61.322 | 55.000 | 0.73 | 0.00 | 42.80 | 4.92 |
3984 | 4728 | 1.322538 | ACCCGGATGCTTTTCATGGC | 61.323 | 55.000 | 0.73 | 0.00 | 35.05 | 4.40 |
3985 | 4729 | 1.135024 | CAACCCGGATGCTTTTCATGG | 60.135 | 52.381 | 0.73 | 0.00 | 35.05 | 3.66 |
3986 | 4730 | 1.736696 | GCAACCCGGATGCTTTTCATG | 60.737 | 52.381 | 20.81 | 0.00 | 40.64 | 3.07 |
3989 | 4733 | 1.215382 | GGCAACCCGGATGCTTTTC | 59.785 | 57.895 | 25.07 | 10.15 | 43.34 | 2.29 |
3991 | 4735 | 1.305213 | ATGGCAACCCGGATGCTTT | 60.305 | 52.632 | 25.07 | 13.92 | 43.34 | 3.51 |
3992 | 4736 | 2.053865 | CATGGCAACCCGGATGCTT | 61.054 | 57.895 | 25.07 | 14.20 | 43.34 | 3.91 |
3993 | 4737 | 2.440796 | CATGGCAACCCGGATGCT | 60.441 | 61.111 | 25.07 | 9.41 | 43.34 | 3.79 |
3994 | 4738 | 4.211502 | GCATGGCAACCCGGATGC | 62.212 | 66.667 | 20.17 | 20.17 | 43.08 | 3.91 |
3995 | 4739 | 0.751277 | TAAGCATGGCAACCCGGATG | 60.751 | 55.000 | 0.73 | 2.24 | 0.00 | 3.51 |
3996 | 4740 | 0.033601 | TTAAGCATGGCAACCCGGAT | 60.034 | 50.000 | 0.73 | 0.00 | 0.00 | 4.18 |
3998 | 4742 | 0.605589 | TTTTAAGCATGGCAACCCGG | 59.394 | 50.000 | 0.00 | 0.00 | 0.00 | 5.73 |
3999 | 4743 | 2.539476 | GATTTTAAGCATGGCAACCCG | 58.461 | 47.619 | 0.00 | 0.00 | 0.00 | 5.28 |
4002 | 4746 | 4.143137 | CGTTTGGATTTTAAGCATGGCAAC | 60.143 | 41.667 | 0.00 | 0.00 | 0.00 | 4.17 |
4003 | 4747 | 3.993081 | CGTTTGGATTTTAAGCATGGCAA | 59.007 | 39.130 | 0.00 | 0.00 | 0.00 | 4.52 |
4004 | 4748 | 3.006323 | ACGTTTGGATTTTAAGCATGGCA | 59.994 | 39.130 | 0.00 | 0.00 | 0.00 | 4.92 |
4005 | 4749 | 3.584834 | ACGTTTGGATTTTAAGCATGGC | 58.415 | 40.909 | 0.00 | 0.00 | 0.00 | 4.40 |
4007 | 4751 | 6.093495 | TCCTAGACGTTTGGATTTTAAGCATG | 59.907 | 38.462 | 0.00 | 0.00 | 0.00 | 4.06 |
4008 | 4752 | 6.177610 | TCCTAGACGTTTGGATTTTAAGCAT | 58.822 | 36.000 | 0.00 | 0.00 | 0.00 | 3.79 |
4017 | 4761 | 8.980481 | AAATGATAAATCCTAGACGTTTGGAT | 57.020 | 30.769 | 10.74 | 10.74 | 42.28 | 3.41 |
4018 | 4762 | 7.223971 | CGAAATGATAAATCCTAGACGTTTGGA | 59.776 | 37.037 | 7.41 | 7.41 | 35.13 | 3.53 |
4019 | 4763 | 7.011109 | ACGAAATGATAAATCCTAGACGTTTGG | 59.989 | 37.037 | 0.00 | 0.00 | 0.00 | 3.28 |
4020 | 4764 | 7.906160 | ACGAAATGATAAATCCTAGACGTTTG | 58.094 | 34.615 | 0.00 | 0.00 | 0.00 | 2.93 |
4024 | 4768 | 7.932120 | AGAACGAAATGATAAATCCTAGACG | 57.068 | 36.000 | 0.00 | 0.00 | 0.00 | 4.18 |
4033 | 4777 | 8.178964 | CGGGACATAAAAGAACGAAATGATAAA | 58.821 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
4034 | 4778 | 7.201661 | CCGGGACATAAAAGAACGAAATGATAA | 60.202 | 37.037 | 0.00 | 0.00 | 0.00 | 1.75 |
4035 | 4779 | 6.259167 | CCGGGACATAAAAGAACGAAATGATA | 59.741 | 38.462 | 0.00 | 0.00 | 0.00 | 2.15 |
4036 | 4780 | 5.065988 | CCGGGACATAAAAGAACGAAATGAT | 59.934 | 40.000 | 0.00 | 0.00 | 0.00 | 2.45 |
4037 | 4781 | 4.393680 | CCGGGACATAAAAGAACGAAATGA | 59.606 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
4040 | 4784 | 3.075884 | CCCGGGACATAAAAGAACGAAA | 58.924 | 45.455 | 18.48 | 0.00 | 0.00 | 3.46 |
4041 | 4785 | 2.302445 | TCCCGGGACATAAAAGAACGAA | 59.698 | 45.455 | 22.63 | 0.00 | 0.00 | 3.85 |
4042 | 4786 | 1.901159 | TCCCGGGACATAAAAGAACGA | 59.099 | 47.619 | 22.63 | 0.00 | 0.00 | 3.85 |
4196 | 7041 | 3.764434 | TGTTGTGGTAAAGGCTTCAAACA | 59.236 | 39.130 | 0.00 | 0.00 | 0.00 | 2.83 |
4238 | 7083 | 1.227999 | CCGCACCGTGATCACAAGTT | 61.228 | 55.000 | 24.93 | 3.32 | 0.00 | 2.66 |
4244 | 7201 | 3.932580 | GAGCACCGCACCGTGATCA | 62.933 | 63.158 | 1.65 | 0.00 | 46.10 | 2.92 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.