Multiple sequence alignment - TraesCS3B01G267700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G267700 chr3B 100.000 2900 0 0 1 2900 431039140 431042039 0.000000e+00 5356.0
1 TraesCS3B01G267700 chr3B 74.246 796 169 30 1069 1843 602331243 602332023 4.700000e-78 302.0
2 TraesCS3B01G267700 chr3B 74.246 796 169 30 1069 1843 602352325 602353105 4.700000e-78 302.0
3 TraesCS3B01G267700 chr3B 73.742 815 169 29 1074 1858 473694413 473693614 7.910000e-71 278.0
4 TraesCS3B01G267700 chr3B 90.865 208 14 5 436 641 602483764 602483560 1.020000e-69 274.0
5 TraesCS3B01G267700 chr3B 82.969 229 33 5 2497 2724 541513575 541513352 4.900000e-48 202.0
6 TraesCS3B01G267700 chr3B 91.912 136 10 1 92 226 602483906 602483771 3.810000e-44 189.0
7 TraesCS3B01G267700 chr3A 91.388 2125 93 37 799 2898 448701704 448703763 0.000000e+00 2828.0
8 TraesCS3B01G267700 chr3A 74.564 802 162 32 1069 1843 598553486 598554272 2.170000e-81 313.0
9 TraesCS3B01G267700 chr3A 73.432 813 175 29 1074 1858 484636979 484636180 1.710000e-67 267.0
10 TraesCS3B01G267700 chr3A 75.514 584 107 26 1089 1645 625210518 625209944 1.330000e-63 254.0
11 TraesCS3B01G267700 chr3A 96.970 99 2 1 1 99 367494403 367494500 6.430000e-37 165.0
12 TraesCS3B01G267700 chr3A 96.000 100 3 1 1 100 99102215 99102313 8.320000e-36 161.0
13 TraesCS3B01G267700 chr3A 83.708 178 12 2 642 802 448701492 448701669 5.010000e-33 152.0
14 TraesCS3B01G267700 chr3D 94.667 1125 30 14 1016 2140 331657127 331658221 0.000000e+00 1718.0
15 TraesCS3B01G267700 chr3D 89.154 461 31 9 2441 2898 331667766 331668210 9.080000e-155 556.0
16 TraesCS3B01G267700 chr3D 90.886 395 21 8 643 1022 331654954 331655348 1.540000e-142 516.0
17 TraesCS3B01G267700 chr3D 92.000 300 19 4 2132 2429 331666960 331667256 1.610000e-112 416.0
18 TraesCS3B01G267700 chr3D 74.969 811 163 27 1074 1858 363597673 363596877 1.290000e-88 337.0
19 TraesCS3B01G267700 chr3D 74.688 802 161 32 1069 1843 455869722 455870508 4.660000e-83 318.0
20 TraesCS3B01G267700 chr3D 93.889 180 11 0 221 400 2113423 2113244 3.680000e-69 272.0
21 TraesCS3B01G267700 chr3D 75.197 633 117 29 1081 1681 480842451 480843075 2.220000e-66 263.0
22 TraesCS3B01G267700 chr3D 72.990 485 103 18 1169 1642 480120723 480121190 8.380000e-31 145.0
23 TraesCS3B01G267700 chr7B 93.750 256 14 2 386 641 537665946 537666199 1.630000e-102 383.0
24 TraesCS3B01G267700 chr7B 95.192 104 4 1 2 105 280603142 280603040 2.310000e-36 163.0
25 TraesCS3B01G267700 chr7B 95.098 102 5 0 1 102 535136142 535136041 8.320000e-36 161.0
26 TraesCS3B01G267700 chr4B 92.578 256 16 2 386 641 481635669 481635417 5.910000e-97 364.0
27 TraesCS3B01G267700 chr4B 90.441 136 11 1 91 226 481635799 481635666 8.260000e-41 178.0
28 TraesCS3B01G267700 chr4B 76.991 226 40 6 2506 2730 500523504 500523290 5.080000e-23 119.0
29 TraesCS3B01G267700 chr7D 97.006 167 5 0 230 396 517575394 517575228 6.120000e-72 281.0
30 TraesCS3B01G267700 chr7D 94.798 173 8 1 218 389 381458560 381458388 4.760000e-68 268.0
31 TraesCS3B01G267700 chr5A 96.471 170 6 0 223 392 429513631 429513462 6.120000e-72 281.0
32 TraesCS3B01G267700 chr5A 72.350 651 127 34 1082 1700 41373873 41374502 3.870000e-34 156.0
33 TraesCS3B01G267700 chr4D 97.561 164 4 0 230 393 93338047 93338210 6.120000e-72 281.0
34 TraesCS3B01G267700 chr4D 82.609 230 28 8 2506 2729 319269848 319269625 2.950000e-45 193.0
35 TraesCS3B01G267700 chr1A 94.022 184 9 2 214 396 393948443 393948625 7.910000e-71 278.0
36 TraesCS3B01G267700 chr7A 94.886 176 7 2 221 396 541437987 541438160 1.020000e-69 274.0
37 TraesCS3B01G267700 chr7A 87.778 90 10 1 2576 2664 127264798 127264709 1.420000e-18 104.0
38 TraesCS3B01G267700 chr5B 92.973 185 10 3 213 396 427931378 427931196 1.710000e-67 267.0
39 TraesCS3B01G267700 chr5B 95.122 41 2 0 94 134 702367165 702367205 6.710000e-07 65.8
40 TraesCS3B01G267700 chr2A 92.513 187 10 3 209 393 310408116 310407932 6.160000e-67 265.0
41 TraesCS3B01G267700 chr2A 80.952 210 22 10 2556 2760 66570355 66570551 1.800000e-32 150.0
42 TraesCS3B01G267700 chr4A 95.327 107 5 0 1 107 477331693 477331587 1.380000e-38 171.0
43 TraesCS3B01G267700 chr4A 95.238 105 5 0 1 105 248494575 248494679 1.790000e-37 167.0
44 TraesCS3B01G267700 chr1D 81.250 224 30 6 2506 2729 370341358 370341569 1.380000e-38 171.0
45 TraesCS3B01G267700 chr6B 97.000 100 3 0 1 100 495133165 495133264 4.970000e-38 169.0
46 TraesCS3B01G267700 chr6B 94.872 39 2 0 96 134 536694644 536694606 8.680000e-06 62.1
47 TraesCS3B01G267700 chr6A 96.040 101 4 0 1 101 469692624 469692524 6.430000e-37 165.0
48 TraesCS3B01G267700 chr1B 95.146 103 3 2 1 102 257977706 257977605 8.320000e-36 161.0
49 TraesCS3B01G267700 chr5D 78.302 106 20 3 2203 2307 73767256 73767153 6.710000e-07 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G267700 chr3B 431039140 431042039 2899 False 5356 5356 100.0000 1 2900 1 chr3B.!!$F1 2899
1 TraesCS3B01G267700 chr3B 602331243 602332023 780 False 302 302 74.2460 1069 1843 1 chr3B.!!$F2 774
2 TraesCS3B01G267700 chr3B 602352325 602353105 780 False 302 302 74.2460 1069 1843 1 chr3B.!!$F3 774
3 TraesCS3B01G267700 chr3B 473693614 473694413 799 True 278 278 73.7420 1074 1858 1 chr3B.!!$R1 784
4 TraesCS3B01G267700 chr3A 448701492 448703763 2271 False 1490 2828 87.5480 642 2898 2 chr3A.!!$F4 2256
5 TraesCS3B01G267700 chr3A 598553486 598554272 786 False 313 313 74.5640 1069 1843 1 chr3A.!!$F3 774
6 TraesCS3B01G267700 chr3A 484636180 484636979 799 True 267 267 73.4320 1074 1858 1 chr3A.!!$R1 784
7 TraesCS3B01G267700 chr3A 625209944 625210518 574 True 254 254 75.5140 1089 1645 1 chr3A.!!$R2 556
8 TraesCS3B01G267700 chr3D 331654954 331658221 3267 False 1117 1718 92.7765 643 2140 2 chr3D.!!$F4 1497
9 TraesCS3B01G267700 chr3D 331666960 331668210 1250 False 486 556 90.5770 2132 2898 2 chr3D.!!$F5 766
10 TraesCS3B01G267700 chr3D 363596877 363597673 796 True 337 337 74.9690 1074 1858 1 chr3D.!!$R2 784
11 TraesCS3B01G267700 chr3D 455869722 455870508 786 False 318 318 74.6880 1069 1843 1 chr3D.!!$F1 774
12 TraesCS3B01G267700 chr3D 480842451 480843075 624 False 263 263 75.1970 1081 1681 1 chr3D.!!$F3 600

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
124 125 0.032017 TTCCCTCTCACTAGCTCCCC 60.032 60.0 0.00 0.0 0.00 4.81 F
640 641 0.107017 AAATCCTGGATCCGCCACTG 60.107 55.0 10.14 0.0 43.33 3.66 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1033 2889 1.107538 CCGGCGAGTAGGAGAATGGA 61.108 60.0 9.3 0.0 0.0 3.41 R
2525 4934 0.665835 GGATTGTTTCGTGCCACACA 59.334 50.0 0.0 0.0 33.4 3.72 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.798433 TTGCCTGACTTGCGACAT 57.202 50.000 0.00 0.00 0.00 3.06
18 19 3.019964 TTGCCTGACTTGCGACATT 57.980 47.368 0.00 0.00 0.00 2.71
19 20 0.592637 TTGCCTGACTTGCGACATTG 59.407 50.000 0.00 0.00 0.00 2.82
20 21 1.154150 GCCTGACTTGCGACATTGC 60.154 57.895 0.00 0.00 0.00 3.56
21 22 1.580845 GCCTGACTTGCGACATTGCT 61.581 55.000 0.00 0.00 35.36 3.91
22 23 0.877071 CCTGACTTGCGACATTGCTT 59.123 50.000 0.00 0.00 35.36 3.91
23 24 1.267806 CCTGACTTGCGACATTGCTTT 59.732 47.619 0.00 0.00 35.36 3.51
24 25 2.578495 CTGACTTGCGACATTGCTTTC 58.422 47.619 0.00 0.00 35.36 2.62
25 26 1.946081 TGACTTGCGACATTGCTTTCA 59.054 42.857 0.00 0.00 35.36 2.69
26 27 2.357323 TGACTTGCGACATTGCTTTCAA 59.643 40.909 0.00 0.00 36.51 2.69
27 28 3.004629 TGACTTGCGACATTGCTTTCAAT 59.995 39.130 0.00 0.00 43.31 2.57
37 38 2.276472 TGCTTTCAATGCGGTTATGC 57.724 45.000 0.00 0.00 0.00 3.14
38 39 1.135141 TGCTTTCAATGCGGTTATGCC 60.135 47.619 0.00 0.00 0.00 4.40
39 40 1.134946 GCTTTCAATGCGGTTATGCCT 59.865 47.619 0.00 0.00 34.25 4.75
40 41 2.796032 GCTTTCAATGCGGTTATGCCTC 60.796 50.000 0.00 0.00 34.25 4.70
41 42 2.418368 TTCAATGCGGTTATGCCTCT 57.582 45.000 0.00 0.00 34.25 3.69
42 43 3.552132 TTCAATGCGGTTATGCCTCTA 57.448 42.857 0.00 0.00 34.25 2.43
43 44 3.552132 TCAATGCGGTTATGCCTCTAA 57.448 42.857 0.00 0.00 34.25 2.10
44 45 3.466836 TCAATGCGGTTATGCCTCTAAG 58.533 45.455 0.00 0.00 34.25 2.18
45 46 1.884235 ATGCGGTTATGCCTCTAAGC 58.116 50.000 0.00 0.00 34.25 3.09
46 47 0.179056 TGCGGTTATGCCTCTAAGCC 60.179 55.000 0.00 0.00 34.25 4.35
47 48 1.222115 GCGGTTATGCCTCTAAGCCG 61.222 60.000 0.00 0.00 40.52 5.52
48 49 0.104304 CGGTTATGCCTCTAAGCCGT 59.896 55.000 0.00 0.00 33.87 5.68
49 50 1.583054 GGTTATGCCTCTAAGCCGTG 58.417 55.000 0.00 0.00 0.00 4.94
50 51 0.938008 GTTATGCCTCTAAGCCGTGC 59.062 55.000 0.00 0.00 0.00 5.34
51 52 0.179056 TTATGCCTCTAAGCCGTGCC 60.179 55.000 0.00 0.00 0.00 5.01
52 53 1.048724 TATGCCTCTAAGCCGTGCCT 61.049 55.000 0.00 0.00 0.00 4.75
53 54 2.202946 GCCTCTAAGCCGTGCCTC 60.203 66.667 0.00 0.00 0.00 4.70
54 55 2.105128 CCTCTAAGCCGTGCCTCG 59.895 66.667 0.00 0.00 39.52 4.63
55 56 2.415608 CCTCTAAGCCGTGCCTCGA 61.416 63.158 0.02 0.00 42.86 4.04
56 57 1.226717 CTCTAAGCCGTGCCTCGAC 60.227 63.158 0.02 0.00 42.86 4.20
57 58 1.934220 CTCTAAGCCGTGCCTCGACA 61.934 60.000 0.02 0.00 42.86 4.35
58 59 1.805945 CTAAGCCGTGCCTCGACAC 60.806 63.158 0.02 0.00 42.86 3.67
64 65 3.986006 GTGCCTCGACACGTGGGA 61.986 66.667 21.57 15.34 40.31 4.37
65 66 3.680786 TGCCTCGACACGTGGGAG 61.681 66.667 24.04 24.04 40.31 4.30
67 68 3.374402 CCTCGACACGTGGGAGCT 61.374 66.667 25.04 4.48 36.95 4.09
68 69 2.044555 CCTCGACACGTGGGAGCTA 61.045 63.158 25.04 4.72 36.95 3.32
69 70 1.384989 CCTCGACACGTGGGAGCTAT 61.385 60.000 25.04 3.08 36.95 2.97
70 71 1.306148 CTCGACACGTGGGAGCTATA 58.694 55.000 21.57 0.00 0.00 1.31
71 72 1.264557 CTCGACACGTGGGAGCTATAG 59.735 57.143 21.57 0.00 0.00 1.31
72 73 0.317938 CGACACGTGGGAGCTATAGC 60.318 60.000 21.57 17.33 42.49 2.97
73 74 0.032267 GACACGTGGGAGCTATAGCC 59.968 60.000 21.17 12.26 43.38 3.93
74 75 1.007271 CACGTGGGAGCTATAGCCG 60.007 63.158 21.17 18.10 43.38 5.52
75 76 2.049063 CGTGGGAGCTATAGCCGC 60.049 66.667 21.17 19.02 43.38 6.53
76 77 2.856628 CGTGGGAGCTATAGCCGCA 61.857 63.158 21.17 21.10 43.38 5.69
77 78 1.674057 GTGGGAGCTATAGCCGCAT 59.326 57.895 24.89 9.43 43.38 4.73
78 79 0.390472 GTGGGAGCTATAGCCGCATC 60.390 60.000 24.89 15.99 43.38 3.91
79 80 1.153745 GGGAGCTATAGCCGCATCG 60.154 63.158 21.17 0.00 43.38 3.84
80 81 1.595993 GGGAGCTATAGCCGCATCGA 61.596 60.000 21.17 0.00 43.38 3.59
81 82 0.179150 GGAGCTATAGCCGCATCGAG 60.179 60.000 21.17 0.00 43.38 4.04
82 83 0.179150 GAGCTATAGCCGCATCGAGG 60.179 60.000 21.17 0.00 43.38 4.63
83 84 1.153745 GCTATAGCCGCATCGAGGG 60.154 63.158 14.13 0.00 34.31 4.30
84 85 1.878656 GCTATAGCCGCATCGAGGGT 61.879 60.000 14.13 0.00 42.74 4.34
85 86 0.109086 CTATAGCCGCATCGAGGGTG 60.109 60.000 0.00 0.00 40.09 4.61
86 87 0.826256 TATAGCCGCATCGAGGGTGT 60.826 55.000 0.00 0.00 40.09 4.16
87 88 1.686325 ATAGCCGCATCGAGGGTGTT 61.686 55.000 0.00 0.00 40.09 3.32
88 89 1.038681 TAGCCGCATCGAGGGTGTTA 61.039 55.000 0.00 0.00 40.09 2.41
89 90 2.171725 GCCGCATCGAGGGTGTTAC 61.172 63.158 0.00 0.00 0.00 2.50
90 91 1.216977 CCGCATCGAGGGTGTTACA 59.783 57.895 0.00 0.00 0.00 2.41
91 92 1.082117 CCGCATCGAGGGTGTTACAC 61.082 60.000 6.99 6.99 0.00 2.90
92 93 1.410737 CGCATCGAGGGTGTTACACG 61.411 60.000 9.52 0.00 34.83 4.49
93 94 1.693083 GCATCGAGGGTGTTACACGC 61.693 60.000 22.31 22.31 45.64 5.34
100 101 0.794473 GGGTGTTACACGCAACTAGC 59.206 55.000 24.30 2.03 44.84 3.42
101 102 1.607251 GGGTGTTACACGCAACTAGCT 60.607 52.381 24.30 0.00 44.84 3.32
102 103 2.140717 GGTGTTACACGCAACTAGCTT 58.859 47.619 9.52 0.00 42.61 3.74
103 104 2.096417 GGTGTTACACGCAACTAGCTTG 60.096 50.000 9.52 0.00 46.99 4.01
104 105 2.096417 GTGTTACACGCAACTAGCTTGG 60.096 50.000 0.00 0.00 45.99 3.61
105 106 2.140717 GTTACACGCAACTAGCTTGGT 58.859 47.619 0.00 0.00 45.99 3.67
106 107 2.536761 TACACGCAACTAGCTTGGTT 57.463 45.000 0.00 0.00 45.99 3.67
107 108 1.226746 ACACGCAACTAGCTTGGTTC 58.773 50.000 0.00 0.00 45.99 3.62
108 109 0.517316 CACGCAACTAGCTTGGTTCC 59.483 55.000 0.00 0.00 42.61 3.62
109 110 0.605589 ACGCAACTAGCTTGGTTCCC 60.606 55.000 0.00 0.00 42.61 3.97
110 111 0.321653 CGCAACTAGCTTGGTTCCCT 60.322 55.000 0.00 0.00 42.61 4.20
111 112 1.454201 GCAACTAGCTTGGTTCCCTC 58.546 55.000 0.00 0.00 41.15 4.30
112 113 1.003696 GCAACTAGCTTGGTTCCCTCT 59.996 52.381 0.00 0.00 41.15 3.69
113 114 2.937433 GCAACTAGCTTGGTTCCCTCTC 60.937 54.545 0.00 0.00 41.15 3.20
114 115 2.303022 CAACTAGCTTGGTTCCCTCTCA 59.697 50.000 0.00 0.00 0.00 3.27
115 116 1.903183 ACTAGCTTGGTTCCCTCTCAC 59.097 52.381 0.00 0.00 0.00 3.51
116 117 2.183679 CTAGCTTGGTTCCCTCTCACT 58.816 52.381 0.00 0.00 0.00 3.41
117 118 2.327325 AGCTTGGTTCCCTCTCACTA 57.673 50.000 0.00 0.00 0.00 2.74
118 119 2.183679 AGCTTGGTTCCCTCTCACTAG 58.816 52.381 0.00 0.00 0.00 2.57
119 120 1.406205 GCTTGGTTCCCTCTCACTAGC 60.406 57.143 0.00 0.00 0.00 3.42
120 121 2.183679 CTTGGTTCCCTCTCACTAGCT 58.816 52.381 0.00 0.00 0.00 3.32
121 122 1.853963 TGGTTCCCTCTCACTAGCTC 58.146 55.000 0.00 0.00 0.00 4.09
122 123 1.116308 GGTTCCCTCTCACTAGCTCC 58.884 60.000 0.00 0.00 0.00 4.70
123 124 1.116308 GTTCCCTCTCACTAGCTCCC 58.884 60.000 0.00 0.00 0.00 4.30
124 125 0.032017 TTCCCTCTCACTAGCTCCCC 60.032 60.000 0.00 0.00 0.00 4.81
125 126 1.830408 CCCTCTCACTAGCTCCCCG 60.830 68.421 0.00 0.00 0.00 5.73
126 127 1.227664 CCTCTCACTAGCTCCCCGA 59.772 63.158 0.00 0.00 0.00 5.14
127 128 1.104577 CCTCTCACTAGCTCCCCGAC 61.105 65.000 0.00 0.00 0.00 4.79
128 129 1.076923 TCTCACTAGCTCCCCGACC 60.077 63.158 0.00 0.00 0.00 4.79
129 130 2.043248 TCACTAGCTCCCCGACCC 60.043 66.667 0.00 0.00 0.00 4.46
130 131 2.363795 CACTAGCTCCCCGACCCA 60.364 66.667 0.00 0.00 0.00 4.51
131 132 2.042843 ACTAGCTCCCCGACCCAG 60.043 66.667 0.00 0.00 0.00 4.45
132 133 2.042843 CTAGCTCCCCGACCCAGT 60.043 66.667 0.00 0.00 0.00 4.00
133 134 1.686110 CTAGCTCCCCGACCCAGTT 60.686 63.158 0.00 0.00 0.00 3.16
134 135 1.229400 TAGCTCCCCGACCCAGTTT 60.229 57.895 0.00 0.00 0.00 2.66
135 136 0.838987 TAGCTCCCCGACCCAGTTTT 60.839 55.000 0.00 0.00 0.00 2.43
136 137 1.228459 GCTCCCCGACCCAGTTTTT 60.228 57.895 0.00 0.00 0.00 1.94
154 155 3.184736 TTTTTGCGAGATAGCCCCC 57.815 52.632 0.00 0.00 36.02 5.40
168 169 4.977393 CCCCCAATCCAGTTACCG 57.023 61.111 0.00 0.00 0.00 4.02
169 170 1.996086 CCCCCAATCCAGTTACCGT 59.004 57.895 0.00 0.00 0.00 4.83
170 171 0.107361 CCCCCAATCCAGTTACCGTC 60.107 60.000 0.00 0.00 0.00 4.79
171 172 0.461339 CCCCAATCCAGTTACCGTCG 60.461 60.000 0.00 0.00 0.00 5.12
172 173 1.087771 CCCAATCCAGTTACCGTCGC 61.088 60.000 0.00 0.00 0.00 5.19
173 174 0.108329 CCAATCCAGTTACCGTCGCT 60.108 55.000 0.00 0.00 0.00 4.93
174 175 0.999406 CAATCCAGTTACCGTCGCTG 59.001 55.000 0.00 0.00 0.00 5.18
175 176 0.892755 AATCCAGTTACCGTCGCTGA 59.107 50.000 4.39 0.00 32.39 4.26
176 177 1.112113 ATCCAGTTACCGTCGCTGAT 58.888 50.000 4.39 0.00 32.39 2.90
177 178 0.892755 TCCAGTTACCGTCGCTGATT 59.107 50.000 4.39 0.00 32.39 2.57
178 179 1.274167 TCCAGTTACCGTCGCTGATTT 59.726 47.619 4.39 0.00 32.39 2.17
179 180 2.073816 CCAGTTACCGTCGCTGATTTT 58.926 47.619 4.39 0.00 32.39 1.82
180 181 2.159707 CCAGTTACCGTCGCTGATTTTG 60.160 50.000 4.39 0.00 32.39 2.44
181 182 1.463444 AGTTACCGTCGCTGATTTTGC 59.537 47.619 0.00 0.00 0.00 3.68
182 183 0.800012 TTACCGTCGCTGATTTTGCC 59.200 50.000 0.00 0.00 0.00 4.52
183 184 1.022451 TACCGTCGCTGATTTTGCCC 61.022 55.000 0.00 0.00 0.00 5.36
184 185 2.331893 CCGTCGCTGATTTTGCCCA 61.332 57.895 0.00 0.00 0.00 5.36
185 186 1.135315 CGTCGCTGATTTTGCCCAG 59.865 57.895 0.00 0.00 0.00 4.45
186 187 1.577328 CGTCGCTGATTTTGCCCAGT 61.577 55.000 0.00 0.00 33.19 4.00
187 188 1.448985 GTCGCTGATTTTGCCCAGTA 58.551 50.000 0.00 0.00 33.19 2.74
188 189 2.017049 GTCGCTGATTTTGCCCAGTAT 58.983 47.619 0.00 0.00 33.19 2.12
189 190 2.423538 GTCGCTGATTTTGCCCAGTATT 59.576 45.455 0.00 0.00 33.19 1.89
190 191 3.625764 GTCGCTGATTTTGCCCAGTATTA 59.374 43.478 0.00 0.00 33.19 0.98
191 192 3.625764 TCGCTGATTTTGCCCAGTATTAC 59.374 43.478 0.00 0.00 33.19 1.89
192 193 3.376859 CGCTGATTTTGCCCAGTATTACA 59.623 43.478 0.00 0.00 33.19 2.41
193 194 4.036734 CGCTGATTTTGCCCAGTATTACAT 59.963 41.667 0.00 0.00 33.19 2.29
194 195 5.284079 GCTGATTTTGCCCAGTATTACATG 58.716 41.667 0.00 0.00 33.19 3.21
195 196 5.067674 GCTGATTTTGCCCAGTATTACATGA 59.932 40.000 0.00 0.00 33.19 3.07
196 197 6.698008 TGATTTTGCCCAGTATTACATGAG 57.302 37.500 0.00 0.00 0.00 2.90
197 198 6.186957 TGATTTTGCCCAGTATTACATGAGT 58.813 36.000 0.00 0.00 0.00 3.41
198 199 6.318648 TGATTTTGCCCAGTATTACATGAGTC 59.681 38.462 0.00 0.00 0.00 3.36
199 200 4.835284 TTGCCCAGTATTACATGAGTCA 57.165 40.909 0.00 0.00 0.00 3.41
200 201 5.372343 TTGCCCAGTATTACATGAGTCAT 57.628 39.130 0.00 0.00 0.00 3.06
201 202 5.372343 TGCCCAGTATTACATGAGTCATT 57.628 39.130 1.86 0.00 0.00 2.57
202 203 5.125356 TGCCCAGTATTACATGAGTCATTG 58.875 41.667 1.86 2.10 0.00 2.82
203 204 5.104569 TGCCCAGTATTACATGAGTCATTGA 60.105 40.000 1.86 0.00 0.00 2.57
204 205 5.237344 GCCCAGTATTACATGAGTCATTGAC 59.763 44.000 8.82 8.82 0.00 3.18
205 206 5.463392 CCCAGTATTACATGAGTCATTGACG 59.537 44.000 11.01 0.00 37.67 4.35
206 207 5.050769 CCAGTATTACATGAGTCATTGACGC 60.051 44.000 12.95 12.95 37.67 5.19
207 208 5.050490 AGTATTACATGAGTCATTGACGCC 58.950 41.667 16.46 10.69 37.67 5.68
208 209 3.326836 TTACATGAGTCATTGACGCCA 57.673 42.857 16.46 15.25 37.67 5.69
209 210 2.408271 ACATGAGTCATTGACGCCAT 57.592 45.000 16.46 16.56 37.67 4.40
210 211 3.541996 ACATGAGTCATTGACGCCATA 57.458 42.857 19.81 4.96 37.67 2.74
211 212 4.077300 ACATGAGTCATTGACGCCATAT 57.923 40.909 19.81 11.54 37.67 1.78
212 213 4.060900 ACATGAGTCATTGACGCCATATC 58.939 43.478 19.81 9.74 37.67 1.63
213 214 3.817709 TGAGTCATTGACGCCATATCA 57.182 42.857 16.46 8.67 37.67 2.15
214 215 4.341366 TGAGTCATTGACGCCATATCAT 57.659 40.909 16.46 0.00 37.67 2.45
215 216 4.309933 TGAGTCATTGACGCCATATCATC 58.690 43.478 16.46 4.44 37.67 2.92
216 217 4.202243 TGAGTCATTGACGCCATATCATCA 60.202 41.667 16.46 6.76 37.67 3.07
217 218 4.903054 AGTCATTGACGCCATATCATCAT 58.097 39.130 11.01 0.00 37.67 2.45
218 219 5.311265 AGTCATTGACGCCATATCATCATT 58.689 37.500 11.01 0.00 37.67 2.57
219 220 5.410746 AGTCATTGACGCCATATCATCATTC 59.589 40.000 11.01 0.00 37.67 2.67
220 221 5.410746 GTCATTGACGCCATATCATCATTCT 59.589 40.000 0.13 0.00 0.00 2.40
221 222 5.999600 TCATTGACGCCATATCATCATTCTT 59.000 36.000 0.00 0.00 0.00 2.52
222 223 7.118245 GTCATTGACGCCATATCATCATTCTTA 59.882 37.037 0.13 0.00 0.00 2.10
223 224 7.332678 TCATTGACGCCATATCATCATTCTTAG 59.667 37.037 0.00 0.00 0.00 2.18
224 225 6.101650 TGACGCCATATCATCATTCTTAGT 57.898 37.500 0.00 0.00 0.00 2.24
225 226 7.227049 TGACGCCATATCATCATTCTTAGTA 57.773 36.000 0.00 0.00 0.00 1.82
226 227 7.840931 TGACGCCATATCATCATTCTTAGTAT 58.159 34.615 0.00 0.00 0.00 2.12
227 228 8.314021 TGACGCCATATCATCATTCTTAGTATT 58.686 33.333 0.00 0.00 0.00 1.89
228 229 9.155975 GACGCCATATCATCATTCTTAGTATTT 57.844 33.333 0.00 0.00 0.00 1.40
229 230 9.155975 ACGCCATATCATCATTCTTAGTATTTC 57.844 33.333 0.00 0.00 0.00 2.17
230 231 8.607459 CGCCATATCATCATTCTTAGTATTTCC 58.393 37.037 0.00 0.00 0.00 3.13
231 232 9.678260 GCCATATCATCATTCTTAGTATTTCCT 57.322 33.333 0.00 0.00 0.00 3.36
235 236 7.361457 TCATCATTCTTAGTATTTCCTCCGT 57.639 36.000 0.00 0.00 0.00 4.69
236 237 7.792032 TCATCATTCTTAGTATTTCCTCCGTT 58.208 34.615 0.00 0.00 0.00 4.44
237 238 7.926555 TCATCATTCTTAGTATTTCCTCCGTTC 59.073 37.037 0.00 0.00 0.00 3.95
238 239 7.419711 TCATTCTTAGTATTTCCTCCGTTCT 57.580 36.000 0.00 0.00 0.00 3.01
239 240 7.848128 TCATTCTTAGTATTTCCTCCGTTCTT 58.152 34.615 0.00 0.00 0.00 2.52
240 241 8.974238 TCATTCTTAGTATTTCCTCCGTTCTTA 58.026 33.333 0.00 0.00 0.00 2.10
241 242 9.595823 CATTCTTAGTATTTCCTCCGTTCTTAA 57.404 33.333 0.00 0.00 0.00 1.85
251 252 8.857694 TTTCCTCCGTTCTTAAATATTTGTCT 57.142 30.769 11.05 0.00 0.00 3.41
252 253 8.857694 TTCCTCCGTTCTTAAATATTTGTCTT 57.142 30.769 11.05 0.00 0.00 3.01
253 254 8.857694 TCCTCCGTTCTTAAATATTTGTCTTT 57.142 30.769 11.05 0.00 0.00 2.52
254 255 8.943002 TCCTCCGTTCTTAAATATTTGTCTTTC 58.057 33.333 11.05 0.00 0.00 2.62
255 256 8.947115 CCTCCGTTCTTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
273 274 9.996554 TGTCTTTCTAGATATTTCAACAAGTGA 57.003 29.630 0.00 0.00 31.86 3.41
282 283 9.302345 AGATATTTCAACAAGTGACTACATACG 57.698 33.333 0.00 0.00 35.39 3.06
283 284 6.721571 ATTTCAACAAGTGACTACATACGG 57.278 37.500 0.00 0.00 35.39 4.02
284 285 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
285 286 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
286 287 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
287 288 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
288 289 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
289 290 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
290 291 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
291 292 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
292 293 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
293 294 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
294 295 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
295 296 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
296 297 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
297 298 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
298 299 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
299 300 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
300 301 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
301 302 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
302 303 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
303 304 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
304 305 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
305 306 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
338 339 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
339 340 7.153217 TGTCTATATACATCCGTATGTGGTG 57.847 40.000 3.56 0.00 45.99 4.17
340 341 6.152154 TGTCTATATACATCCGTATGTGGTGG 59.848 42.308 3.56 0.00 45.99 4.61
341 342 6.152323 GTCTATATACATCCGTATGTGGTGGT 59.848 42.308 3.56 0.00 45.99 4.16
342 343 3.746045 ATACATCCGTATGTGGTGGTC 57.254 47.619 3.56 0.00 45.99 4.02
343 344 0.539986 ACATCCGTATGTGGTGGTCC 59.460 55.000 0.00 0.00 44.79 4.46
344 345 0.539518 CATCCGTATGTGGTGGTCCA 59.460 55.000 0.00 0.00 42.05 4.02
345 346 1.140852 CATCCGTATGTGGTGGTCCAT 59.859 52.381 0.00 0.00 46.20 3.41
346 347 1.281419 TCCGTATGTGGTGGTCCATT 58.719 50.000 0.00 0.00 46.20 3.16
347 348 1.631388 TCCGTATGTGGTGGTCCATTT 59.369 47.619 0.00 0.00 46.20 2.32
348 349 1.742831 CCGTATGTGGTGGTCCATTTG 59.257 52.381 0.00 0.00 46.20 2.32
349 350 2.616765 CCGTATGTGGTGGTCCATTTGA 60.617 50.000 0.00 0.00 46.20 2.69
350 351 3.078097 CGTATGTGGTGGTCCATTTGAA 58.922 45.455 0.00 0.00 46.20 2.69
351 352 3.504134 CGTATGTGGTGGTCCATTTGAAA 59.496 43.478 0.00 0.00 46.20 2.69
352 353 4.157656 CGTATGTGGTGGTCCATTTGAAAT 59.842 41.667 0.00 0.00 46.20 2.17
353 354 4.806640 ATGTGGTGGTCCATTTGAAATC 57.193 40.909 0.00 0.00 46.20 2.17
354 355 3.843422 TGTGGTGGTCCATTTGAAATCT 58.157 40.909 0.00 0.00 46.20 2.40
355 356 3.826157 TGTGGTGGTCCATTTGAAATCTC 59.174 43.478 0.00 0.00 46.20 2.75
356 357 4.082125 GTGGTGGTCCATTTGAAATCTCT 58.918 43.478 0.00 0.00 46.20 3.10
357 358 5.222027 TGTGGTGGTCCATTTGAAATCTCTA 60.222 40.000 0.00 0.00 46.20 2.43
358 359 5.710099 GTGGTGGTCCATTTGAAATCTCTAA 59.290 40.000 0.00 0.00 46.20 2.10
359 360 6.208599 GTGGTGGTCCATTTGAAATCTCTAAA 59.791 38.462 0.00 0.00 46.20 1.85
360 361 6.780031 TGGTGGTCCATTTGAAATCTCTAAAA 59.220 34.615 0.00 0.00 39.03 1.52
361 362 7.288852 TGGTGGTCCATTTGAAATCTCTAAAAA 59.711 33.333 0.00 0.00 39.03 1.94
384 385 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
385 386 5.703730 ACAAATATTTAGGAACGGAGGGA 57.296 39.130 0.00 0.00 0.00 4.20
386 387 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
387 388 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
388 389 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
389 390 6.416631 AATATTTAGGAACGGAGGGAGTAC 57.583 41.667 0.00 0.00 0.00 2.73
390 391 2.905415 TTAGGAACGGAGGGAGTACA 57.095 50.000 0.00 0.00 0.00 2.90
391 392 3.393426 TTAGGAACGGAGGGAGTACAT 57.607 47.619 0.00 0.00 0.00 2.29
392 393 1.486211 AGGAACGGAGGGAGTACATG 58.514 55.000 0.00 0.00 0.00 3.21
393 394 1.006758 AGGAACGGAGGGAGTACATGA 59.993 52.381 0.00 0.00 0.00 3.07
394 395 2.040178 GGAACGGAGGGAGTACATGAT 58.960 52.381 0.00 0.00 0.00 2.45
395 396 2.434702 GGAACGGAGGGAGTACATGATT 59.565 50.000 0.00 0.00 0.00 2.57
396 397 3.118371 GGAACGGAGGGAGTACATGATTT 60.118 47.826 0.00 0.00 0.00 2.17
397 398 3.543680 ACGGAGGGAGTACATGATTTG 57.456 47.619 0.00 0.00 0.00 2.32
398 399 2.213499 CGGAGGGAGTACATGATTTGC 58.787 52.381 0.00 0.00 0.00 3.68
399 400 2.158900 CGGAGGGAGTACATGATTTGCT 60.159 50.000 0.00 0.00 0.00 3.91
400 401 3.069586 CGGAGGGAGTACATGATTTGCTA 59.930 47.826 0.00 0.00 0.00 3.49
401 402 4.381411 GGAGGGAGTACATGATTTGCTAC 58.619 47.826 0.00 0.00 0.00 3.58
402 403 4.141711 GGAGGGAGTACATGATTTGCTACA 60.142 45.833 0.00 0.00 0.00 2.74
403 404 5.455326 GGAGGGAGTACATGATTTGCTACAT 60.455 44.000 0.00 0.00 0.00 2.29
404 405 6.006275 AGGGAGTACATGATTTGCTACATT 57.994 37.500 0.00 0.00 0.00 2.71
405 406 6.426587 AGGGAGTACATGATTTGCTACATTT 58.573 36.000 0.00 0.00 0.00 2.32
406 407 6.891908 AGGGAGTACATGATTTGCTACATTTT 59.108 34.615 0.00 0.00 0.00 1.82
407 408 7.067494 AGGGAGTACATGATTTGCTACATTTTC 59.933 37.037 0.00 0.00 0.00 2.29
408 409 7.067494 GGGAGTACATGATTTGCTACATTTTCT 59.933 37.037 0.00 0.00 0.00 2.52
409 410 7.912250 GGAGTACATGATTTGCTACATTTTCTG 59.088 37.037 0.00 0.00 0.00 3.02
410 411 8.340618 AGTACATGATTTGCTACATTTTCTGT 57.659 30.769 0.00 0.00 42.13 3.41
411 412 8.239314 AGTACATGATTTGCTACATTTTCTGTG 58.761 33.333 0.00 0.00 38.92 3.66
412 413 5.865552 ACATGATTTGCTACATTTTCTGTGC 59.134 36.000 0.00 0.00 38.92 4.57
413 414 5.450592 TGATTTGCTACATTTTCTGTGCA 57.549 34.783 0.00 0.00 38.92 4.57
414 415 6.028146 TGATTTGCTACATTTTCTGTGCAT 57.972 33.333 0.00 0.00 39.73 3.96
415 416 5.865013 TGATTTGCTACATTTTCTGTGCATG 59.135 36.000 0.00 0.00 39.73 4.06
416 417 5.450592 TTTGCTACATTTTCTGTGCATGA 57.549 34.783 0.00 0.00 39.73 3.07
417 418 5.648178 TTGCTACATTTTCTGTGCATGAT 57.352 34.783 0.00 0.00 39.73 2.45
418 419 5.648178 TGCTACATTTTCTGTGCATGATT 57.352 34.783 0.00 0.00 38.92 2.57
419 420 6.028146 TGCTACATTTTCTGTGCATGATTT 57.972 33.333 0.00 0.00 38.92 2.17
420 421 6.457355 TGCTACATTTTCTGTGCATGATTTT 58.543 32.000 0.00 0.00 38.92 1.82
421 422 6.930164 TGCTACATTTTCTGTGCATGATTTTT 59.070 30.769 0.00 0.00 38.92 1.94
422 423 7.116662 TGCTACATTTTCTGTGCATGATTTTTC 59.883 33.333 0.00 0.00 38.92 2.29
423 424 6.790285 ACATTTTCTGTGCATGATTTTTCC 57.210 33.333 0.00 0.00 36.48 3.13
424 425 5.702209 ACATTTTCTGTGCATGATTTTTCCC 59.298 36.000 0.00 0.00 36.48 3.97
425 426 3.574284 TTCTGTGCATGATTTTTCCCG 57.426 42.857 0.00 0.00 0.00 5.14
426 427 1.202114 TCTGTGCATGATTTTTCCCGC 59.798 47.619 0.00 0.00 0.00 6.13
427 428 0.964700 TGTGCATGATTTTTCCCGCA 59.035 45.000 0.00 0.00 0.00 5.69
428 429 1.342496 TGTGCATGATTTTTCCCGCAA 59.658 42.857 0.00 0.00 0.00 4.85
429 430 1.726248 GTGCATGATTTTTCCCGCAAC 59.274 47.619 0.00 0.00 0.00 4.17
430 431 1.617850 TGCATGATTTTTCCCGCAACT 59.382 42.857 0.00 0.00 0.00 3.16
431 432 2.036992 TGCATGATTTTTCCCGCAACTT 59.963 40.909 0.00 0.00 0.00 2.66
432 433 3.256879 TGCATGATTTTTCCCGCAACTTA 59.743 39.130 0.00 0.00 0.00 2.24
433 434 4.241681 GCATGATTTTTCCCGCAACTTAA 58.758 39.130 0.00 0.00 0.00 1.85
434 435 4.327087 GCATGATTTTTCCCGCAACTTAAG 59.673 41.667 0.00 0.00 0.00 1.85
435 436 4.513198 TGATTTTTCCCGCAACTTAAGG 57.487 40.909 7.53 0.00 0.00 2.69
436 437 4.145807 TGATTTTTCCCGCAACTTAAGGA 58.854 39.130 7.53 0.00 0.00 3.36
437 438 4.770010 TGATTTTTCCCGCAACTTAAGGAT 59.230 37.500 7.53 0.00 0.00 3.24
438 439 5.946972 TGATTTTTCCCGCAACTTAAGGATA 59.053 36.000 7.53 0.00 0.00 2.59
439 440 6.434652 TGATTTTTCCCGCAACTTAAGGATAA 59.565 34.615 7.53 0.00 0.00 1.75
440 441 6.844097 TTTTTCCCGCAACTTAAGGATAAT 57.156 33.333 7.53 0.00 0.00 1.28
441 442 5.828299 TTTCCCGCAACTTAAGGATAATG 57.172 39.130 7.53 0.00 0.00 1.90
442 443 4.764050 TCCCGCAACTTAAGGATAATGA 57.236 40.909 7.53 0.00 0.00 2.57
443 444 5.304686 TCCCGCAACTTAAGGATAATGAT 57.695 39.130 7.53 0.00 0.00 2.45
444 445 5.063204 TCCCGCAACTTAAGGATAATGATG 58.937 41.667 7.53 0.00 0.00 3.07
445 446 4.320494 CCCGCAACTTAAGGATAATGATGC 60.320 45.833 7.53 3.66 0.00 3.91
446 447 4.320494 CCGCAACTTAAGGATAATGATGCC 60.320 45.833 7.53 0.00 0.00 4.40
447 448 4.275689 CGCAACTTAAGGATAATGATGCCA 59.724 41.667 7.53 0.00 0.00 4.92
448 449 5.048504 CGCAACTTAAGGATAATGATGCCAT 60.049 40.000 7.53 0.00 33.66 4.40
449 450 6.154445 GCAACTTAAGGATAATGATGCCATG 58.846 40.000 7.53 0.00 32.36 3.66
450 451 5.972107 ACTTAAGGATAATGATGCCATGC 57.028 39.130 7.53 0.00 32.36 4.06
451 452 4.768968 ACTTAAGGATAATGATGCCATGCC 59.231 41.667 7.53 0.00 32.36 4.40
452 453 1.830279 AGGATAATGATGCCATGCCG 58.170 50.000 0.00 0.00 32.36 5.69
453 454 1.074405 AGGATAATGATGCCATGCCGT 59.926 47.619 0.00 0.00 32.36 5.68
454 455 1.200716 GGATAATGATGCCATGCCGTG 59.799 52.381 0.00 0.00 32.36 4.94
455 456 1.881973 GATAATGATGCCATGCCGTGT 59.118 47.619 0.00 0.00 32.36 4.49
456 457 1.761449 TAATGATGCCATGCCGTGTT 58.239 45.000 0.00 0.00 32.36 3.32
457 458 0.896923 AATGATGCCATGCCGTGTTT 59.103 45.000 0.00 0.00 32.36 2.83
458 459 0.457035 ATGATGCCATGCCGTGTTTC 59.543 50.000 0.00 0.00 0.00 2.78
459 460 0.608856 TGATGCCATGCCGTGTTTCT 60.609 50.000 0.00 0.00 0.00 2.52
460 461 1.339535 TGATGCCATGCCGTGTTTCTA 60.340 47.619 0.00 0.00 0.00 2.10
461 462 1.331756 GATGCCATGCCGTGTTTCTAG 59.668 52.381 0.00 0.00 0.00 2.43
462 463 1.305219 TGCCATGCCGTGTTTCTAGC 61.305 55.000 0.00 0.00 0.00 3.42
463 464 1.993369 GCCATGCCGTGTTTCTAGCC 61.993 60.000 0.00 0.00 0.00 3.93
464 465 0.676466 CCATGCCGTGTTTCTAGCCA 60.676 55.000 0.00 0.00 0.00 4.75
465 466 1.382522 CATGCCGTGTTTCTAGCCAT 58.617 50.000 0.00 0.00 0.00 4.40
466 467 1.064505 CATGCCGTGTTTCTAGCCATG 59.935 52.381 0.00 0.00 0.00 3.66
467 468 0.323302 TGCCGTGTTTCTAGCCATGA 59.677 50.000 0.00 0.00 0.00 3.07
468 469 1.271108 TGCCGTGTTTCTAGCCATGAA 60.271 47.619 0.00 0.00 0.00 2.57
469 470 1.810151 GCCGTGTTTCTAGCCATGAAA 59.190 47.619 0.00 0.00 0.00 2.69
470 471 2.227865 GCCGTGTTTCTAGCCATGAAAA 59.772 45.455 0.00 0.00 35.54 2.29
471 472 3.305064 GCCGTGTTTCTAGCCATGAAAAA 60.305 43.478 0.00 0.00 35.54 1.94
507 508 9.842775 TTGCATAGTAGATGATCTTCAAATTCT 57.157 29.630 0.00 4.55 0.00 2.40
508 509 9.842775 TGCATAGTAGATGATCTTCAAATTCTT 57.157 29.630 0.00 0.00 0.00 2.52
551 552 9.950496 ATTTTAGATATTGCTACTGTGATAGGG 57.050 33.333 0.00 0.00 0.00 3.53
552 553 8.721133 TTTAGATATTGCTACTGTGATAGGGA 57.279 34.615 0.00 0.00 0.00 4.20
553 554 8.721133 TTAGATATTGCTACTGTGATAGGGAA 57.279 34.615 0.00 0.00 0.00 3.97
554 555 7.618019 AGATATTGCTACTGTGATAGGGAAA 57.382 36.000 0.00 0.00 0.00 3.13
555 556 8.034313 AGATATTGCTACTGTGATAGGGAAAA 57.966 34.615 0.00 0.00 0.00 2.29
556 557 8.494433 AGATATTGCTACTGTGATAGGGAAAAA 58.506 33.333 0.00 0.00 0.00 1.94
579 580 3.813529 GCTCTTGCTATGTGAACGTTT 57.186 42.857 0.46 0.00 36.03 3.60
580 581 4.147219 GCTCTTGCTATGTGAACGTTTT 57.853 40.909 0.46 0.00 36.03 2.43
581 582 5.277601 GCTCTTGCTATGTGAACGTTTTA 57.722 39.130 0.46 0.00 36.03 1.52
582 583 5.316770 GCTCTTGCTATGTGAACGTTTTAG 58.683 41.667 0.46 3.45 36.03 1.85
583 584 5.120208 GCTCTTGCTATGTGAACGTTTTAGA 59.880 40.000 0.46 0.00 36.03 2.10
584 585 6.183360 GCTCTTGCTATGTGAACGTTTTAGAT 60.183 38.462 0.46 1.84 36.03 1.98
585 586 7.010183 GCTCTTGCTATGTGAACGTTTTAGATA 59.990 37.037 0.46 2.97 36.03 1.98
586 587 8.942338 TCTTGCTATGTGAACGTTTTAGATAT 57.058 30.769 0.46 0.00 0.00 1.63
587 588 9.031360 TCTTGCTATGTGAACGTTTTAGATATC 57.969 33.333 0.46 0.00 0.00 1.63
588 589 8.710835 TTGCTATGTGAACGTTTTAGATATCA 57.289 30.769 0.46 3.09 0.00 2.15
589 590 8.126871 TGCTATGTGAACGTTTTAGATATCAC 57.873 34.615 0.46 3.89 38.08 3.06
590 591 7.043656 TGCTATGTGAACGTTTTAGATATCACG 60.044 37.037 0.46 8.51 39.91 4.35
596 597 4.186159 ACGTTTTAGATATCACGTTGGGG 58.814 43.478 11.85 0.00 43.10 4.96
597 598 4.081531 ACGTTTTAGATATCACGTTGGGGA 60.082 41.667 11.85 0.00 43.10 4.81
598 599 4.871557 CGTTTTAGATATCACGTTGGGGAA 59.128 41.667 5.32 0.00 0.00 3.97
599 600 5.352016 CGTTTTAGATATCACGTTGGGGAAA 59.648 40.000 5.32 0.00 0.00 3.13
600 601 6.128227 CGTTTTAGATATCACGTTGGGGAAAA 60.128 38.462 5.32 0.00 0.00 2.29
601 602 7.573469 CGTTTTAGATATCACGTTGGGGAAAAA 60.573 37.037 5.32 0.00 0.00 1.94
626 627 3.554259 GAACACCCAAGTTCGAAATCC 57.446 47.619 0.00 0.00 38.58 3.01
627 628 2.951229 ACACCCAAGTTCGAAATCCT 57.049 45.000 0.00 0.00 0.00 3.24
628 629 2.504367 ACACCCAAGTTCGAAATCCTG 58.496 47.619 0.00 0.00 0.00 3.86
629 630 1.812571 CACCCAAGTTCGAAATCCTGG 59.187 52.381 8.94 8.94 0.00 4.45
630 631 1.702957 ACCCAAGTTCGAAATCCTGGA 59.297 47.619 15.96 0.00 0.00 3.86
631 632 2.308866 ACCCAAGTTCGAAATCCTGGAT 59.691 45.455 15.96 2.57 0.00 3.41
632 633 2.945668 CCCAAGTTCGAAATCCTGGATC 59.054 50.000 15.96 0.00 0.00 3.36
633 634 2.945668 CCAAGTTCGAAATCCTGGATCC 59.054 50.000 10.14 4.20 0.00 3.36
634 635 2.604046 AGTTCGAAATCCTGGATCCG 57.396 50.000 19.22 19.22 0.00 4.18
635 636 0.938008 GTTCGAAATCCTGGATCCGC 59.062 55.000 20.01 9.05 0.00 5.54
636 637 0.179056 TTCGAAATCCTGGATCCGCC 60.179 55.000 20.01 6.91 37.10 6.13
637 638 1.146041 CGAAATCCTGGATCCGCCA 59.854 57.895 10.14 0.00 46.96 5.69
638 639 1.160329 CGAAATCCTGGATCCGCCAC 61.160 60.000 10.14 0.00 43.33 5.01
639 640 0.181350 GAAATCCTGGATCCGCCACT 59.819 55.000 10.14 0.00 43.33 4.00
640 641 0.107017 AAATCCTGGATCCGCCACTG 60.107 55.000 10.14 0.00 43.33 3.66
693 695 3.715628 AAACAGCTCGCTGAAAATTGT 57.284 38.095 24.30 0.00 46.30 2.71
699 701 4.556135 CAGCTCGCTGAAAATTGTACAATG 59.444 41.667 21.46 9.83 46.30 2.82
771 790 8.956426 TCCCAACAATTAATGATTCTCTACAAC 58.044 33.333 0.00 0.00 0.00 3.32
796 815 5.553123 ACATTGAACATGTGGAATTTGCAT 58.447 33.333 0.00 0.00 0.00 3.96
830 887 2.069273 CTTCCAAGTCTACGTGCCAAG 58.931 52.381 0.00 0.00 0.00 3.61
831 888 1.045407 TCCAAGTCTACGTGCCAAGT 58.955 50.000 0.00 0.00 0.00 3.16
832 889 1.000506 TCCAAGTCTACGTGCCAAGTC 59.999 52.381 0.00 0.00 0.00 3.01
836 893 1.272769 AGTCTACGTGCCAAGTCTTCC 59.727 52.381 0.00 0.00 0.00 3.46
838 895 1.689813 TCTACGTGCCAAGTCTTCCAA 59.310 47.619 0.00 0.00 0.00 3.53
841 898 0.868406 CGTGCCAAGTCTTCCAAGTC 59.132 55.000 0.00 0.00 0.00 3.01
1033 2889 3.245948 ACTCAAATGGTCTCCTCTCCTCT 60.246 47.826 0.00 0.00 0.00 3.69
1071 2927 0.757935 GCATGGTTGGCATCTCCCAT 60.758 55.000 0.00 0.00 38.20 4.00
1142 2998 4.717629 CGACGCCTGCAACTCCGA 62.718 66.667 0.00 0.00 0.00 4.55
1263 3125 0.517316 GCAACGTTTTCAGCTCCGAT 59.483 50.000 0.00 0.00 0.00 4.18
1683 3584 2.816958 CTGCAGAGCGCGTGGAAT 60.817 61.111 8.42 0.00 46.97 3.01
1729 3630 3.617368 GAGGCTTCTACCTCGGCA 58.383 61.111 0.00 0.00 46.52 5.69
1829 3730 2.048597 CGCCAGCAACTACGGTGA 60.049 61.111 0.00 0.00 36.48 4.02
1956 3858 7.744087 TGCACTACACAATAAATCACTCTTT 57.256 32.000 0.00 0.00 0.00 2.52
1957 3859 8.165239 TGCACTACACAATAAATCACTCTTTT 57.835 30.769 0.00 0.00 0.00 2.27
1958 3860 8.289618 TGCACTACACAATAAATCACTCTTTTC 58.710 33.333 0.00 0.00 0.00 2.29
1959 3861 8.507249 GCACTACACAATAAATCACTCTTTTCT 58.493 33.333 0.00 0.00 0.00 2.52
1964 3866 8.902806 ACACAATAAATCACTCTTTTCTTGACA 58.097 29.630 0.00 0.00 0.00 3.58
1965 3867 9.903682 CACAATAAATCACTCTTTTCTTGACAT 57.096 29.630 0.00 0.00 0.00 3.06
2213 4121 8.786826 AAGGATTTCAATACAAATCTGACGTA 57.213 30.769 0.00 0.00 41.00 3.57
2286 4195 4.114073 TCGAACGTATGGCAATTAATCGT 58.886 39.130 12.71 5.94 0.00 3.73
2299 4208 6.293955 GGCAATTAATCGTTGTAGCATGGTAT 60.294 38.462 8.06 0.00 0.00 2.73
2300 4209 7.138736 GCAATTAATCGTTGTAGCATGGTATT 58.861 34.615 8.06 0.86 0.00 1.89
2301 4210 7.647715 GCAATTAATCGTTGTAGCATGGTATTT 59.352 33.333 8.06 0.00 0.00 1.40
2455 4863 2.871633 TGGATACATATTGTGCGCACTG 59.128 45.455 37.59 29.23 46.17 3.66
2522 4931 2.364632 TGACCCAAATGATAAGTGCCG 58.635 47.619 0.00 0.00 0.00 5.69
2523 4932 2.290641 TGACCCAAATGATAAGTGCCGT 60.291 45.455 0.00 0.00 0.00 5.68
2525 4934 4.134563 GACCCAAATGATAAGTGCCGTAT 58.865 43.478 0.00 0.00 0.00 3.06
2538 4947 2.534452 CCGTATGTGTGGCACGAAA 58.466 52.632 13.77 0.79 37.89 3.46
2546 4955 0.533085 TGTGGCACGAAACAATCCGA 60.533 50.000 13.77 0.00 0.00 4.55
2547 4956 0.165944 GTGGCACGAAACAATCCGAG 59.834 55.000 0.00 0.00 0.00 4.63
2549 4958 1.298859 GGCACGAAACAATCCGAGCT 61.299 55.000 0.00 0.00 41.00 4.09
2551 4960 1.730064 GCACGAAACAATCCGAGCTTA 59.270 47.619 0.00 0.00 38.85 3.09
2555 4964 4.000988 ACGAAACAATCCGAGCTTAACAT 58.999 39.130 0.00 0.00 0.00 2.71
2586 4996 5.941948 ACTAAAGTTGTCATCCGAAAAGG 57.058 39.130 0.00 0.00 42.97 3.11
2626 5036 6.391227 AACTGAAACTTGTCATCCGAAAAT 57.609 33.333 0.00 0.00 0.00 1.82
2634 5045 7.581011 ACTTGTCATCCGAAAATAAAATTGC 57.419 32.000 0.00 0.00 0.00 3.56
2666 5077 2.973945 ACTAAAGTTGTCATCCTCGCC 58.026 47.619 0.00 0.00 0.00 5.54
2667 5078 2.567615 ACTAAAGTTGTCATCCTCGCCT 59.432 45.455 0.00 0.00 0.00 5.52
2668 5079 2.568623 AAAGTTGTCATCCTCGCCTT 57.431 45.000 0.00 0.00 0.00 4.35
2669 5080 1.813513 AAGTTGTCATCCTCGCCTTG 58.186 50.000 0.00 0.00 0.00 3.61
2670 5081 0.674895 AGTTGTCATCCTCGCCTTGC 60.675 55.000 0.00 0.00 0.00 4.01
2683 5095 2.316119 GCCTTGCGTCACTAAACTTG 57.684 50.000 0.00 0.00 0.00 3.16
2685 5097 1.069227 CCTTGCGTCACTAAACTTGCC 60.069 52.381 0.00 0.00 0.00 4.52
2686 5098 1.601903 CTTGCGTCACTAAACTTGCCA 59.398 47.619 0.00 0.00 0.00 4.92
2687 5099 1.890876 TGCGTCACTAAACTTGCCAT 58.109 45.000 0.00 0.00 0.00 4.40
2697 5109 9.040939 GTCACTAAACTTGCCATAAAAACATTT 57.959 29.630 0.00 0.00 0.00 2.32
2699 5111 9.039870 CACTAAACTTGCCATAAAAACATTTGA 57.960 29.630 0.00 0.00 0.00 2.69
2711 5123 9.119329 CATAAAAACATTTGAAATTGCCATGTG 57.881 29.630 0.11 0.00 0.00 3.21
2848 5262 2.032117 TCACGACGACTAAGCGTTAACA 60.032 45.455 0.00 0.00 45.72 2.41
2849 5263 2.088056 CACGACGACTAAGCGTTAACAC 59.912 50.000 0.00 0.00 45.72 3.32
2864 5284 0.677731 AACACCTGCATGATGGACGG 60.678 55.000 10.76 0.00 0.00 4.79
2880 5300 1.453197 CGGGCCCCAACAGTATTCC 60.453 63.158 18.66 0.00 0.00 3.01
2898 5318 2.165301 CGGTCGCGGGTCAAGATTC 61.165 63.158 6.13 0.00 0.00 2.52
2899 5319 1.814169 GGTCGCGGGTCAAGATTCC 60.814 63.158 6.13 0.00 0.00 3.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.592637 CAATGTCGCAAGTCAGGCAA 59.407 50.000 0.00 0.00 39.11 4.52
1 2 1.855213 GCAATGTCGCAAGTCAGGCA 61.855 55.000 0.00 0.00 39.11 4.75
2 3 1.154150 GCAATGTCGCAAGTCAGGC 60.154 57.895 0.00 0.00 39.11 4.85
3 4 0.877071 AAGCAATGTCGCAAGTCAGG 59.123 50.000 0.00 0.00 39.11 3.86
4 5 2.031769 TGAAAGCAATGTCGCAAGTCAG 60.032 45.455 0.00 0.00 39.11 3.51
5 6 1.946081 TGAAAGCAATGTCGCAAGTCA 59.054 42.857 0.00 0.00 40.25 3.41
6 7 2.686558 TGAAAGCAATGTCGCAAGTC 57.313 45.000 0.00 0.00 39.48 3.01
7 8 3.648339 ATTGAAAGCAATGTCGCAAGT 57.352 38.095 0.00 0.00 42.91 3.16
16 17 3.189285 GCATAACCGCATTGAAAGCAAT 58.811 40.909 0.00 0.00 45.33 3.56
17 18 2.605030 GCATAACCGCATTGAAAGCAA 58.395 42.857 0.00 0.00 38.60 3.91
18 19 1.135141 GGCATAACCGCATTGAAAGCA 60.135 47.619 0.00 0.00 0.00 3.91
19 20 1.134946 AGGCATAACCGCATTGAAAGC 59.865 47.619 0.00 0.00 46.52 3.51
20 21 2.684881 AGAGGCATAACCGCATTGAAAG 59.315 45.455 0.00 0.00 46.52 2.62
21 22 2.722094 AGAGGCATAACCGCATTGAAA 58.278 42.857 0.00 0.00 46.52 2.69
22 23 2.418368 AGAGGCATAACCGCATTGAA 57.582 45.000 0.00 0.00 46.52 2.69
23 24 3.466836 CTTAGAGGCATAACCGCATTGA 58.533 45.455 0.00 0.00 46.52 2.57
24 25 2.031682 GCTTAGAGGCATAACCGCATTG 60.032 50.000 0.00 0.00 46.52 2.82
25 26 2.222027 GCTTAGAGGCATAACCGCATT 58.778 47.619 0.00 0.00 46.52 3.56
26 27 1.543429 GGCTTAGAGGCATAACCGCAT 60.543 52.381 0.00 0.00 46.52 4.73
27 28 0.179056 GGCTTAGAGGCATAACCGCA 60.179 55.000 0.00 0.00 46.52 5.69
28 29 1.222115 CGGCTTAGAGGCATAACCGC 61.222 60.000 2.40 0.00 46.52 5.68
29 30 0.104304 ACGGCTTAGAGGCATAACCG 59.896 55.000 15.16 15.16 46.52 4.44
30 31 1.583054 CACGGCTTAGAGGCATAACC 58.417 55.000 2.40 0.00 41.44 2.85
31 32 0.938008 GCACGGCTTAGAGGCATAAC 59.062 55.000 2.40 0.00 41.44 1.89
32 33 0.179056 GGCACGGCTTAGAGGCATAA 60.179 55.000 2.40 0.00 41.44 1.90
33 34 1.048724 AGGCACGGCTTAGAGGCATA 61.049 55.000 2.40 0.00 41.44 3.14
34 35 2.190578 GGCACGGCTTAGAGGCAT 59.809 61.111 2.40 0.00 41.44 4.40
35 36 3.003173 AGGCACGGCTTAGAGGCA 61.003 61.111 2.40 0.00 41.44 4.75
36 37 2.202946 GAGGCACGGCTTAGAGGC 60.203 66.667 0.00 0.00 37.44 4.70
37 38 2.105128 CGAGGCACGGCTTAGAGG 59.895 66.667 0.00 0.00 38.46 3.69
38 39 1.226717 GTCGAGGCACGGCTTAGAG 60.227 63.158 0.62 0.00 43.76 2.43
39 40 2.882876 GTCGAGGCACGGCTTAGA 59.117 61.111 0.62 0.00 43.76 2.10
47 48 3.916392 CTCCCACGTGTCGAGGCAC 62.916 68.421 15.65 0.00 36.35 5.01
48 49 3.680786 CTCCCACGTGTCGAGGCA 61.681 66.667 15.65 0.00 36.35 4.75
50 51 1.384989 ATAGCTCCCACGTGTCGAGG 61.385 60.000 23.66 14.89 37.35 4.63
51 52 1.264557 CTATAGCTCCCACGTGTCGAG 59.735 57.143 20.16 20.16 0.00 4.04
52 53 1.306148 CTATAGCTCCCACGTGTCGA 58.694 55.000 15.65 8.55 0.00 4.20
53 54 0.317938 GCTATAGCTCCCACGTGTCG 60.318 60.000 17.75 4.04 38.21 4.35
54 55 0.032267 GGCTATAGCTCCCACGTGTC 59.968 60.000 23.53 0.00 41.70 3.67
55 56 1.735376 CGGCTATAGCTCCCACGTGT 61.735 60.000 23.53 0.00 41.70 4.49
56 57 1.007271 CGGCTATAGCTCCCACGTG 60.007 63.158 23.53 9.08 41.70 4.49
57 58 2.857744 GCGGCTATAGCTCCCACGT 61.858 63.158 23.53 0.00 41.70 4.49
58 59 2.049063 GCGGCTATAGCTCCCACG 60.049 66.667 23.53 18.20 41.70 4.94
59 60 0.390472 GATGCGGCTATAGCTCCCAC 60.390 60.000 23.53 6.29 41.70 4.61
60 61 1.877576 CGATGCGGCTATAGCTCCCA 61.878 60.000 23.53 17.22 41.70 4.37
61 62 1.153745 CGATGCGGCTATAGCTCCC 60.154 63.158 23.53 12.57 41.70 4.30
62 63 0.179150 CTCGATGCGGCTATAGCTCC 60.179 60.000 23.53 14.86 41.70 4.70
63 64 0.179150 CCTCGATGCGGCTATAGCTC 60.179 60.000 23.53 15.77 41.70 4.09
64 65 1.599606 CCCTCGATGCGGCTATAGCT 61.600 60.000 23.53 4.19 41.70 3.32
65 66 1.153745 CCCTCGATGCGGCTATAGC 60.154 63.158 16.78 16.78 41.14 2.97
66 67 0.109086 CACCCTCGATGCGGCTATAG 60.109 60.000 0.00 0.00 0.00 1.31
67 68 0.826256 ACACCCTCGATGCGGCTATA 60.826 55.000 0.00 0.00 0.00 1.31
68 69 1.686325 AACACCCTCGATGCGGCTAT 61.686 55.000 0.00 0.00 0.00 2.97
69 70 1.038681 TAACACCCTCGATGCGGCTA 61.039 55.000 0.00 0.00 0.00 3.93
70 71 2.355986 TAACACCCTCGATGCGGCT 61.356 57.895 0.00 0.00 0.00 5.52
71 72 2.171725 GTAACACCCTCGATGCGGC 61.172 63.158 0.00 0.00 0.00 6.53
72 73 1.082117 GTGTAACACCCTCGATGCGG 61.082 60.000 0.00 0.00 36.32 5.69
73 74 1.410737 CGTGTAACACCCTCGATGCG 61.411 60.000 0.00 0.00 35.74 4.73
74 75 1.693083 GCGTGTAACACCCTCGATGC 61.693 60.000 0.00 0.00 35.74 3.91
75 76 0.389296 TGCGTGTAACACCCTCGATG 60.389 55.000 0.00 0.00 35.74 3.84
76 77 0.319083 TTGCGTGTAACACCCTCGAT 59.681 50.000 0.00 0.00 35.74 3.59
77 78 0.598158 GTTGCGTGTAACACCCTCGA 60.598 55.000 0.00 0.00 35.74 4.04
78 79 0.599204 AGTTGCGTGTAACACCCTCG 60.599 55.000 3.72 0.00 35.74 4.63
79 80 2.334838 CTAGTTGCGTGTAACACCCTC 58.665 52.381 3.72 0.00 35.74 4.30
80 81 1.607251 GCTAGTTGCGTGTAACACCCT 60.607 52.381 3.72 0.00 35.74 4.34
81 82 0.794473 GCTAGTTGCGTGTAACACCC 59.206 55.000 3.72 0.00 35.74 4.61
104 105 1.116308 GGGAGCTAGTGAGAGGGAAC 58.884 60.000 0.00 0.00 0.00 3.62
105 106 0.032017 GGGGAGCTAGTGAGAGGGAA 60.032 60.000 0.00 0.00 0.00 3.97
106 107 1.621377 GGGGAGCTAGTGAGAGGGA 59.379 63.158 0.00 0.00 0.00 4.20
107 108 1.830408 CGGGGAGCTAGTGAGAGGG 60.830 68.421 0.00 0.00 0.00 4.30
108 109 1.104577 GTCGGGGAGCTAGTGAGAGG 61.105 65.000 0.00 0.00 0.00 3.69
109 110 1.104577 GGTCGGGGAGCTAGTGAGAG 61.105 65.000 0.00 0.00 0.00 3.20
110 111 1.076923 GGTCGGGGAGCTAGTGAGA 60.077 63.158 0.00 0.00 0.00 3.27
111 112 2.128507 GGGTCGGGGAGCTAGTGAG 61.129 68.421 0.00 0.00 0.00 3.51
112 113 2.043248 GGGTCGGGGAGCTAGTGA 60.043 66.667 0.00 0.00 0.00 3.41
113 114 2.363795 TGGGTCGGGGAGCTAGTG 60.364 66.667 0.00 0.00 0.00 2.74
114 115 2.042843 CTGGGTCGGGGAGCTAGT 60.043 66.667 0.00 0.00 34.71 2.57
115 116 1.265454 AAACTGGGTCGGGGAGCTAG 61.265 60.000 6.64 6.64 42.75 3.42
116 117 0.838987 AAAACTGGGTCGGGGAGCTA 60.839 55.000 0.00 0.00 0.00 3.32
117 118 1.716028 AAAAACTGGGTCGGGGAGCT 61.716 55.000 0.00 0.00 0.00 4.09
118 119 1.228459 AAAAACTGGGTCGGGGAGC 60.228 57.895 0.00 0.00 0.00 4.70
136 137 3.184736 GGGGGCTATCTCGCAAAAA 57.815 52.632 0.00 0.00 0.00 1.94
137 138 4.977393 GGGGGCTATCTCGCAAAA 57.023 55.556 0.00 0.00 0.00 2.44
151 152 0.107361 GACGGTAACTGGATTGGGGG 60.107 60.000 0.00 0.00 0.00 5.40
152 153 0.461339 CGACGGTAACTGGATTGGGG 60.461 60.000 0.00 0.00 0.00 4.96
153 154 1.087771 GCGACGGTAACTGGATTGGG 61.088 60.000 0.00 0.00 0.00 4.12
154 155 0.108329 AGCGACGGTAACTGGATTGG 60.108 55.000 0.00 0.00 0.00 3.16
155 156 0.999406 CAGCGACGGTAACTGGATTG 59.001 55.000 0.00 0.00 0.00 2.67
156 157 0.892755 TCAGCGACGGTAACTGGATT 59.107 50.000 0.00 0.00 32.19 3.01
157 158 1.112113 ATCAGCGACGGTAACTGGAT 58.888 50.000 0.00 0.00 32.19 3.41
158 159 0.892755 AATCAGCGACGGTAACTGGA 59.107 50.000 0.00 0.00 32.19 3.86
159 160 1.722011 AAATCAGCGACGGTAACTGG 58.278 50.000 0.00 0.00 32.19 4.00
160 161 2.724839 GCAAAATCAGCGACGGTAACTG 60.725 50.000 0.00 0.00 0.00 3.16
161 162 1.463444 GCAAAATCAGCGACGGTAACT 59.537 47.619 0.00 0.00 0.00 2.24
162 163 1.465187 GGCAAAATCAGCGACGGTAAC 60.465 52.381 0.00 0.00 0.00 2.50
163 164 0.800012 GGCAAAATCAGCGACGGTAA 59.200 50.000 0.00 0.00 0.00 2.85
164 165 1.022451 GGGCAAAATCAGCGACGGTA 61.022 55.000 0.00 0.00 0.00 4.02
165 166 2.332654 GGGCAAAATCAGCGACGGT 61.333 57.895 0.00 0.00 0.00 4.83
166 167 2.257286 CTGGGCAAAATCAGCGACGG 62.257 60.000 0.00 0.00 0.00 4.79
167 168 1.135315 CTGGGCAAAATCAGCGACG 59.865 57.895 0.00 0.00 0.00 5.12
168 169 1.448985 TACTGGGCAAAATCAGCGAC 58.551 50.000 0.00 0.00 34.57 5.19
169 170 2.418368 ATACTGGGCAAAATCAGCGA 57.582 45.000 0.00 0.00 34.57 4.93
170 171 3.376859 TGTAATACTGGGCAAAATCAGCG 59.623 43.478 0.00 0.00 34.57 5.18
171 172 4.981806 TGTAATACTGGGCAAAATCAGC 57.018 40.909 0.00 0.00 34.57 4.26
172 173 6.319658 ACTCATGTAATACTGGGCAAAATCAG 59.680 38.462 0.00 0.00 37.07 2.90
173 174 6.186957 ACTCATGTAATACTGGGCAAAATCA 58.813 36.000 0.00 0.00 0.00 2.57
174 175 6.318648 TGACTCATGTAATACTGGGCAAAATC 59.681 38.462 0.00 0.00 0.00 2.17
175 176 6.186957 TGACTCATGTAATACTGGGCAAAAT 58.813 36.000 0.00 0.00 0.00 1.82
176 177 5.565509 TGACTCATGTAATACTGGGCAAAA 58.434 37.500 0.00 0.00 0.00 2.44
177 178 5.172687 TGACTCATGTAATACTGGGCAAA 57.827 39.130 0.00 0.00 0.00 3.68
178 179 4.835284 TGACTCATGTAATACTGGGCAA 57.165 40.909 0.00 0.00 0.00 4.52
179 180 5.104569 TCAATGACTCATGTAATACTGGGCA 60.105 40.000 0.00 0.00 0.00 5.36
180 181 5.237344 GTCAATGACTCATGTAATACTGGGC 59.763 44.000 6.07 0.00 0.00 5.36
181 182 5.463392 CGTCAATGACTCATGTAATACTGGG 59.537 44.000 11.92 0.00 0.00 4.45
182 183 5.050769 GCGTCAATGACTCATGTAATACTGG 60.051 44.000 11.92 0.00 0.00 4.00
183 184 5.050769 GGCGTCAATGACTCATGTAATACTG 60.051 44.000 11.92 0.00 0.00 2.74
184 185 5.050490 GGCGTCAATGACTCATGTAATACT 58.950 41.667 11.92 0.00 0.00 2.12
185 186 4.808895 TGGCGTCAATGACTCATGTAATAC 59.191 41.667 11.92 0.00 0.00 1.89
186 187 5.017294 TGGCGTCAATGACTCATGTAATA 57.983 39.130 11.92 0.00 0.00 0.98
187 188 3.872696 TGGCGTCAATGACTCATGTAAT 58.127 40.909 11.92 0.00 0.00 1.89
188 189 3.326836 TGGCGTCAATGACTCATGTAA 57.673 42.857 11.92 0.00 0.00 2.41
189 190 3.541996 ATGGCGTCAATGACTCATGTA 57.458 42.857 11.92 0.00 0.00 2.29
190 191 2.408271 ATGGCGTCAATGACTCATGT 57.592 45.000 11.92 0.00 0.00 3.21
191 192 4.060205 TGATATGGCGTCAATGACTCATG 58.940 43.478 20.85 5.74 31.06 3.07
192 193 4.341366 TGATATGGCGTCAATGACTCAT 57.659 40.909 11.92 15.61 32.38 2.90
193 194 3.817709 TGATATGGCGTCAATGACTCA 57.182 42.857 11.92 9.86 0.00 3.41
194 195 4.309933 TGATGATATGGCGTCAATGACTC 58.690 43.478 11.92 3.03 31.24 3.36
195 196 4.341366 TGATGATATGGCGTCAATGACT 57.659 40.909 11.92 0.00 31.24 3.41
196 197 5.410746 AGAATGATGATATGGCGTCAATGAC 59.589 40.000 2.75 2.75 37.35 3.06
197 198 5.554070 AGAATGATGATATGGCGTCAATGA 58.446 37.500 0.00 0.00 37.35 2.57
198 199 5.874895 AGAATGATGATATGGCGTCAATG 57.125 39.130 0.00 0.00 37.35 2.82
199 200 7.164122 ACTAAGAATGATGATATGGCGTCAAT 58.836 34.615 0.00 0.00 37.35 2.57
200 201 6.524734 ACTAAGAATGATGATATGGCGTCAA 58.475 36.000 0.00 0.00 37.35 3.18
201 202 6.101650 ACTAAGAATGATGATATGGCGTCA 57.898 37.500 0.00 0.00 38.11 4.35
202 203 8.709386 AATACTAAGAATGATGATATGGCGTC 57.291 34.615 0.00 0.00 0.00 5.19
203 204 9.155975 GAAATACTAAGAATGATGATATGGCGT 57.844 33.333 0.00 0.00 0.00 5.68
204 205 8.607459 GGAAATACTAAGAATGATGATATGGCG 58.393 37.037 0.00 0.00 0.00 5.69
205 206 9.678260 AGGAAATACTAAGAATGATGATATGGC 57.322 33.333 0.00 0.00 0.00 4.40
209 210 9.090103 ACGGAGGAAATACTAAGAATGATGATA 57.910 33.333 0.00 0.00 0.00 2.15
210 211 7.967908 ACGGAGGAAATACTAAGAATGATGAT 58.032 34.615 0.00 0.00 0.00 2.45
211 212 7.361457 ACGGAGGAAATACTAAGAATGATGA 57.639 36.000 0.00 0.00 0.00 2.92
212 213 7.928706 AGAACGGAGGAAATACTAAGAATGATG 59.071 37.037 0.00 0.00 0.00 3.07
213 214 8.024145 AGAACGGAGGAAATACTAAGAATGAT 57.976 34.615 0.00 0.00 0.00 2.45
214 215 7.419711 AGAACGGAGGAAATACTAAGAATGA 57.580 36.000 0.00 0.00 0.00 2.57
215 216 9.595823 TTAAGAACGGAGGAAATACTAAGAATG 57.404 33.333 0.00 0.00 0.00 2.67
225 226 9.462606 AGACAAATATTTAAGAACGGAGGAAAT 57.537 29.630 0.00 0.00 0.00 2.17
226 227 8.857694 AGACAAATATTTAAGAACGGAGGAAA 57.142 30.769 0.00 0.00 0.00 3.13
227 228 8.857694 AAGACAAATATTTAAGAACGGAGGAA 57.142 30.769 0.00 0.00 0.00 3.36
228 229 8.857694 AAAGACAAATATTTAAGAACGGAGGA 57.142 30.769 0.00 0.00 0.00 3.71
229 230 8.947115 AGAAAGACAAATATTTAAGAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
247 248 9.996554 TCACTTGTTGAAATATCTAGAAAGACA 57.003 29.630 0.00 0.00 33.57 3.41
256 257 9.302345 CGTATGTAGTCACTTGTTGAAATATCT 57.698 33.333 0.00 0.00 35.39 1.98
257 258 8.540492 CCGTATGTAGTCACTTGTTGAAATATC 58.460 37.037 0.00 0.00 35.39 1.63
258 259 8.255206 TCCGTATGTAGTCACTTGTTGAAATAT 58.745 33.333 0.00 0.00 35.39 1.28
259 260 7.604549 TCCGTATGTAGTCACTTGTTGAAATA 58.395 34.615 0.00 0.00 35.39 1.40
260 261 6.460781 TCCGTATGTAGTCACTTGTTGAAAT 58.539 36.000 0.00 0.00 35.39 2.17
261 262 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
262 263 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
263 264 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
264 265 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
265 266 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
266 267 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
267 268 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
268 269 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
269 270 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
270 271 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
271 272 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
272 273 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
273 274 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
274 275 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
275 276 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
276 277 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
277 278 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
278 279 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
279 280 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
280 281 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
281 282 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
282 283 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
283 284 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
312 313 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
313 314 8.899771 CACCACATACGGATGTATATAGACATA 58.100 37.037 14.23 0.00 44.82 2.29
314 315 7.147897 CCACCACATACGGATGTATATAGACAT 60.148 40.741 14.23 12.70 44.82 3.06
315 316 6.152154 CCACCACATACGGATGTATATAGACA 59.848 42.308 14.23 2.07 44.82 3.41
316 317 6.152323 ACCACCACATACGGATGTATATAGAC 59.848 42.308 14.23 0.00 44.82 2.59
317 318 6.250711 ACCACCACATACGGATGTATATAGA 58.749 40.000 14.23 0.00 44.82 1.98
318 319 6.405508 GGACCACCACATACGGATGTATATAG 60.406 46.154 14.23 0.00 44.82 1.31
319 320 5.419788 GGACCACCACATACGGATGTATATA 59.580 44.000 14.23 0.00 44.82 0.86
320 321 4.222145 GGACCACCACATACGGATGTATAT 59.778 45.833 14.23 0.00 44.82 0.86
321 322 3.575256 GGACCACCACATACGGATGTATA 59.425 47.826 14.23 0.00 44.82 1.47
322 323 2.367567 GGACCACCACATACGGATGTAT 59.632 50.000 14.23 1.38 44.82 2.29
323 324 1.758280 GGACCACCACATACGGATGTA 59.242 52.381 14.23 0.00 44.82 2.29
325 326 0.539518 TGGACCACCACATACGGATG 59.460 55.000 5.94 5.94 41.77 3.51
326 327 3.000002 TGGACCACCACATACGGAT 58.000 52.632 0.00 0.00 41.77 4.18
327 328 4.543195 TGGACCACCACATACGGA 57.457 55.556 0.00 0.00 41.77 4.69
336 337 6.834168 TTTAGAGATTTCAAATGGACCACC 57.166 37.500 0.00 0.00 0.00 4.61
359 360 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
360 361 6.949463 TCCCTCCGTTCCTAAATATTTGTTTT 59.051 34.615 11.05 0.00 0.00 2.43
361 362 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
362 363 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
363 364 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
364 365 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
365 366 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
366 367 5.901276 TGTACTCCCTCCGTTCCTAAATATT 59.099 40.000 0.00 0.00 0.00 1.28
367 368 5.461327 TGTACTCCCTCCGTTCCTAAATAT 58.539 41.667 0.00 0.00 0.00 1.28
368 369 4.870636 TGTACTCCCTCCGTTCCTAAATA 58.129 43.478 0.00 0.00 0.00 1.40
369 370 3.716431 TGTACTCCCTCCGTTCCTAAAT 58.284 45.455 0.00 0.00 0.00 1.40
370 371 3.173953 TGTACTCCCTCCGTTCCTAAA 57.826 47.619 0.00 0.00 0.00 1.85
371 372 2.905415 TGTACTCCCTCCGTTCCTAA 57.095 50.000 0.00 0.00 0.00 2.69
372 373 2.242965 TCATGTACTCCCTCCGTTCCTA 59.757 50.000 0.00 0.00 0.00 2.94
373 374 1.006758 TCATGTACTCCCTCCGTTCCT 59.993 52.381 0.00 0.00 0.00 3.36
374 375 1.481871 TCATGTACTCCCTCCGTTCC 58.518 55.000 0.00 0.00 0.00 3.62
375 376 3.821421 AATCATGTACTCCCTCCGTTC 57.179 47.619 0.00 0.00 0.00 3.95
376 377 3.873910 CAAATCATGTACTCCCTCCGTT 58.126 45.455 0.00 0.00 0.00 4.44
377 378 2.420129 GCAAATCATGTACTCCCTCCGT 60.420 50.000 0.00 0.00 0.00 4.69
378 379 2.158900 AGCAAATCATGTACTCCCTCCG 60.159 50.000 0.00 0.00 0.00 4.63
379 380 3.567478 AGCAAATCATGTACTCCCTCC 57.433 47.619 0.00 0.00 0.00 4.30
380 381 5.023533 TGTAGCAAATCATGTACTCCCTC 57.976 43.478 0.00 0.00 0.00 4.30
381 382 5.636903 ATGTAGCAAATCATGTACTCCCT 57.363 39.130 0.00 0.00 0.00 4.20
382 383 6.699575 AAATGTAGCAAATCATGTACTCCC 57.300 37.500 0.00 0.00 0.00 4.30
383 384 7.912250 CAGAAAATGTAGCAAATCATGTACTCC 59.088 37.037 0.00 0.00 0.00 3.85
384 385 8.454106 ACAGAAAATGTAGCAAATCATGTACTC 58.546 33.333 0.00 0.00 41.60 2.59
385 386 8.239314 CACAGAAAATGTAGCAAATCATGTACT 58.761 33.333 0.00 0.00 41.41 2.73
386 387 7.008628 GCACAGAAAATGTAGCAAATCATGTAC 59.991 37.037 0.00 0.00 41.41 2.90
387 388 7.028962 GCACAGAAAATGTAGCAAATCATGTA 58.971 34.615 0.00 0.00 41.41 2.29
388 389 5.865552 GCACAGAAAATGTAGCAAATCATGT 59.134 36.000 0.00 0.00 41.41 3.21
389 390 5.865013 TGCACAGAAAATGTAGCAAATCATG 59.135 36.000 0.00 0.00 41.41 3.07
390 391 6.028146 TGCACAGAAAATGTAGCAAATCAT 57.972 33.333 0.00 0.00 41.41 2.45
391 392 5.450592 TGCACAGAAAATGTAGCAAATCA 57.549 34.783 0.00 0.00 41.41 2.57
392 393 6.094719 TCATGCACAGAAAATGTAGCAAATC 58.905 36.000 0.00 0.00 43.90 2.17
393 394 6.028146 TCATGCACAGAAAATGTAGCAAAT 57.972 33.333 0.00 0.00 43.90 2.32
394 395 5.450592 TCATGCACAGAAAATGTAGCAAA 57.549 34.783 0.00 0.86 43.90 3.68
395 396 5.648178 ATCATGCACAGAAAATGTAGCAA 57.352 34.783 0.00 0.00 43.90 3.91
396 397 5.648178 AATCATGCACAGAAAATGTAGCA 57.352 34.783 0.00 0.00 44.40 3.49
397 398 6.956299 AAAATCATGCACAGAAAATGTAGC 57.044 33.333 0.00 0.00 41.41 3.58
398 399 7.063780 GGGAAAAATCATGCACAGAAAATGTAG 59.936 37.037 0.00 0.00 41.41 2.74
399 400 6.873076 GGGAAAAATCATGCACAGAAAATGTA 59.127 34.615 0.00 0.00 41.41 2.29
400 401 5.702209 GGGAAAAATCATGCACAGAAAATGT 59.298 36.000 0.00 0.00 45.43 2.71
401 402 5.163933 CGGGAAAAATCATGCACAGAAAATG 60.164 40.000 0.00 0.00 0.00 2.32
402 403 4.931002 CGGGAAAAATCATGCACAGAAAAT 59.069 37.500 0.00 0.00 0.00 1.82
403 404 4.305769 CGGGAAAAATCATGCACAGAAAA 58.694 39.130 0.00 0.00 0.00 2.29
404 405 3.860378 GCGGGAAAAATCATGCACAGAAA 60.860 43.478 0.00 0.00 0.00 2.52
405 406 2.352617 GCGGGAAAAATCATGCACAGAA 60.353 45.455 0.00 0.00 0.00 3.02
406 407 1.202114 GCGGGAAAAATCATGCACAGA 59.798 47.619 0.00 0.00 0.00 3.41
407 408 1.067706 TGCGGGAAAAATCATGCACAG 60.068 47.619 0.00 0.00 0.00 3.66
408 409 0.964700 TGCGGGAAAAATCATGCACA 59.035 45.000 0.00 0.00 0.00 4.57
409 410 1.726248 GTTGCGGGAAAAATCATGCAC 59.274 47.619 0.00 0.00 31.16 4.57
410 411 1.617850 AGTTGCGGGAAAAATCATGCA 59.382 42.857 0.00 0.00 0.00 3.96
411 412 2.368655 AGTTGCGGGAAAAATCATGC 57.631 45.000 0.00 0.00 0.00 4.06
412 413 4.864247 CCTTAAGTTGCGGGAAAAATCATG 59.136 41.667 0.97 0.00 0.00 3.07
413 414 4.770010 TCCTTAAGTTGCGGGAAAAATCAT 59.230 37.500 0.97 0.00 0.00 2.45
414 415 4.145807 TCCTTAAGTTGCGGGAAAAATCA 58.854 39.130 0.97 0.00 0.00 2.57
415 416 4.776795 TCCTTAAGTTGCGGGAAAAATC 57.223 40.909 0.97 0.00 0.00 2.17
416 417 6.844097 TTATCCTTAAGTTGCGGGAAAAAT 57.156 33.333 0.97 0.00 0.00 1.82
417 418 6.434652 TCATTATCCTTAAGTTGCGGGAAAAA 59.565 34.615 0.97 0.00 0.00 1.94
418 419 5.946972 TCATTATCCTTAAGTTGCGGGAAAA 59.053 36.000 0.97 0.00 0.00 2.29
419 420 5.502079 TCATTATCCTTAAGTTGCGGGAAA 58.498 37.500 0.97 0.00 0.00 3.13
420 421 5.105567 TCATTATCCTTAAGTTGCGGGAA 57.894 39.130 0.97 0.00 0.00 3.97
421 422 4.764050 TCATTATCCTTAAGTTGCGGGA 57.236 40.909 0.97 0.00 0.00 5.14
422 423 4.320494 GCATCATTATCCTTAAGTTGCGGG 60.320 45.833 0.97 0.00 0.00 6.13
423 424 4.320494 GGCATCATTATCCTTAAGTTGCGG 60.320 45.833 0.97 0.00 0.00 5.69
424 425 4.275689 TGGCATCATTATCCTTAAGTTGCG 59.724 41.667 0.97 0.00 0.00 4.85
425 426 5.772825 TGGCATCATTATCCTTAAGTTGC 57.227 39.130 0.97 0.00 0.00 4.17
426 427 6.154445 GCATGGCATCATTATCCTTAAGTTG 58.846 40.000 0.00 0.00 0.00 3.16
427 428 5.244626 GGCATGGCATCATTATCCTTAAGTT 59.755 40.000 15.47 0.00 0.00 2.66
428 429 4.768968 GGCATGGCATCATTATCCTTAAGT 59.231 41.667 15.47 0.00 0.00 2.24
429 430 4.142534 CGGCATGGCATCATTATCCTTAAG 60.143 45.833 20.37 0.00 0.00 1.85
430 431 3.758023 CGGCATGGCATCATTATCCTTAA 59.242 43.478 20.37 0.00 0.00 1.85
431 432 3.244875 ACGGCATGGCATCATTATCCTTA 60.245 43.478 20.37 0.00 0.00 2.69
432 433 2.165167 CGGCATGGCATCATTATCCTT 58.835 47.619 20.37 0.00 0.00 3.36
433 434 1.074405 ACGGCATGGCATCATTATCCT 59.926 47.619 20.37 0.00 0.00 3.24
434 435 1.200716 CACGGCATGGCATCATTATCC 59.799 52.381 20.37 0.00 0.00 2.59
435 436 1.881973 ACACGGCATGGCATCATTATC 59.118 47.619 20.37 0.00 0.00 1.75
436 437 1.985473 ACACGGCATGGCATCATTAT 58.015 45.000 20.37 0.00 0.00 1.28
437 438 1.761449 AACACGGCATGGCATCATTA 58.239 45.000 20.37 0.00 0.00 1.90
438 439 0.896923 AAACACGGCATGGCATCATT 59.103 45.000 20.37 5.84 0.00 2.57
439 440 0.457035 GAAACACGGCATGGCATCAT 59.543 50.000 20.37 0.48 0.00 2.45
440 441 0.608856 AGAAACACGGCATGGCATCA 60.609 50.000 20.37 0.00 0.00 3.07
441 442 1.331756 CTAGAAACACGGCATGGCATC 59.668 52.381 20.37 8.70 0.00 3.91
442 443 1.382522 CTAGAAACACGGCATGGCAT 58.617 50.000 20.37 0.00 0.00 4.40
443 444 1.305219 GCTAGAAACACGGCATGGCA 61.305 55.000 20.37 0.00 0.00 4.92
444 445 1.429423 GCTAGAAACACGGCATGGC 59.571 57.895 9.69 9.69 0.00 4.40
445 446 0.676466 TGGCTAGAAACACGGCATGG 60.676 55.000 0.00 0.00 0.00 3.66
446 447 1.382522 ATGGCTAGAAACACGGCATG 58.617 50.000 0.00 0.00 41.58 4.06
447 448 1.065491 TCATGGCTAGAAACACGGCAT 60.065 47.619 0.00 0.00 43.57 4.40
448 449 0.323302 TCATGGCTAGAAACACGGCA 59.677 50.000 0.00 0.00 37.63 5.69
449 450 1.448985 TTCATGGCTAGAAACACGGC 58.551 50.000 0.00 0.00 0.00 5.68
450 451 4.497473 TTTTTCATGGCTAGAAACACGG 57.503 40.909 0.00 0.00 34.94 4.94
481 482 9.842775 AGAATTTGAAGATCATCTACTATGCAA 57.157 29.630 0.00 0.00 0.00 4.08
482 483 9.842775 AAGAATTTGAAGATCATCTACTATGCA 57.157 29.630 0.00 0.00 0.00 3.96
525 526 9.950496 CCCTATCACAGTAGCAATATCTAAAAT 57.050 33.333 0.00 0.00 0.00 1.82
526 527 9.154632 TCCCTATCACAGTAGCAATATCTAAAA 57.845 33.333 0.00 0.00 0.00 1.52
527 528 8.721133 TCCCTATCACAGTAGCAATATCTAAA 57.279 34.615 0.00 0.00 0.00 1.85
528 529 8.721133 TTCCCTATCACAGTAGCAATATCTAA 57.279 34.615 0.00 0.00 0.00 2.10
529 530 8.721133 TTTCCCTATCACAGTAGCAATATCTA 57.279 34.615 0.00 0.00 0.00 1.98
530 531 7.618019 TTTCCCTATCACAGTAGCAATATCT 57.382 36.000 0.00 0.00 0.00 1.98
531 532 8.677148 TTTTTCCCTATCACAGTAGCAATATC 57.323 34.615 0.00 0.00 0.00 1.63
559 560 3.813529 AAACGTTCACATAGCAAGAGC 57.186 42.857 0.00 0.00 42.56 4.09
560 561 6.706055 TCTAAAACGTTCACATAGCAAGAG 57.294 37.500 0.00 0.00 0.00 2.85
561 562 8.942338 ATATCTAAAACGTTCACATAGCAAGA 57.058 30.769 0.00 0.00 0.00 3.02
562 563 8.817100 TGATATCTAAAACGTTCACATAGCAAG 58.183 33.333 0.00 0.00 0.00 4.01
563 564 8.600625 GTGATATCTAAAACGTTCACATAGCAA 58.399 33.333 0.00 0.00 34.92 3.91
564 565 7.043656 CGTGATATCTAAAACGTTCACATAGCA 60.044 37.037 0.00 2.54 34.57 3.49
565 566 7.043590 ACGTGATATCTAAAACGTTCACATAGC 60.044 37.037 11.85 0.00 46.27 2.97
566 567 8.336498 ACGTGATATCTAAAACGTTCACATAG 57.664 34.615 11.85 2.83 46.27 2.23
575 576 4.435425 TCCCCAACGTGATATCTAAAACG 58.565 43.478 10.73 10.73 41.64 3.60
576 577 6.746745 TTTCCCCAACGTGATATCTAAAAC 57.253 37.500 3.98 0.00 0.00 2.43
577 578 7.762588 TTTTTCCCCAACGTGATATCTAAAA 57.237 32.000 3.98 0.00 0.00 1.52
599 600 5.331876 TCGAACTTGGGTGTTCAATTTTT 57.668 34.783 7.91 0.00 44.59 1.94
600 601 4.993029 TCGAACTTGGGTGTTCAATTTT 57.007 36.364 7.91 0.00 44.59 1.82
601 602 4.993029 TTCGAACTTGGGTGTTCAATTT 57.007 36.364 0.00 0.00 44.59 1.82
602 603 4.993029 TTTCGAACTTGGGTGTTCAATT 57.007 36.364 0.00 0.00 44.59 2.32
603 604 4.022329 GGATTTCGAACTTGGGTGTTCAAT 60.022 41.667 0.00 1.76 44.59 2.57
604 605 3.316868 GGATTTCGAACTTGGGTGTTCAA 59.683 43.478 0.00 0.00 44.59 2.69
605 606 2.882137 GGATTTCGAACTTGGGTGTTCA 59.118 45.455 0.00 0.00 44.59 3.18
606 607 3.058224 CAGGATTTCGAACTTGGGTGTTC 60.058 47.826 0.00 0.00 41.91 3.18
607 608 2.884639 CAGGATTTCGAACTTGGGTGTT 59.115 45.455 0.00 0.00 0.00 3.32
608 609 2.504367 CAGGATTTCGAACTTGGGTGT 58.496 47.619 0.00 0.00 0.00 4.16
609 610 1.812571 CCAGGATTTCGAACTTGGGTG 59.187 52.381 8.55 0.00 31.11 4.61
610 611 1.702957 TCCAGGATTTCGAACTTGGGT 59.297 47.619 14.45 0.00 34.67 4.51
611 612 2.489938 TCCAGGATTTCGAACTTGGG 57.510 50.000 14.45 6.44 34.67 4.12
612 613 2.945668 GGATCCAGGATTTCGAACTTGG 59.054 50.000 6.95 9.81 35.12 3.61
613 614 2.609459 CGGATCCAGGATTTCGAACTTG 59.391 50.000 13.41 0.00 0.00 3.16
614 615 2.906354 CGGATCCAGGATTTCGAACTT 58.094 47.619 13.41 0.00 0.00 2.66
615 616 1.473434 GCGGATCCAGGATTTCGAACT 60.473 52.381 22.75 0.00 0.00 3.01
616 617 0.938008 GCGGATCCAGGATTTCGAAC 59.062 55.000 22.75 8.39 0.00 3.95
617 618 0.179056 GGCGGATCCAGGATTTCGAA 60.179 55.000 22.75 0.00 34.01 3.71
618 619 1.334384 TGGCGGATCCAGGATTTCGA 61.334 55.000 22.75 6.80 40.72 3.71
619 620 1.146041 TGGCGGATCCAGGATTTCG 59.854 57.895 13.41 17.17 40.72 3.46
634 635 4.767255 CAGACCGGGAGCAGTGGC 62.767 72.222 6.32 0.00 41.61 5.01
635 636 4.767255 GCAGACCGGGAGCAGTGG 62.767 72.222 6.32 0.00 0.00 4.00
638 639 3.449227 TACGCAGACCGGGAGCAG 61.449 66.667 6.32 5.93 42.52 4.24
639 640 3.755628 GTACGCAGACCGGGAGCA 61.756 66.667 6.32 0.00 42.52 4.26
640 641 3.003113 AAGTACGCAGACCGGGAGC 62.003 63.158 6.32 5.58 42.52 4.70
693 695 4.523943 GGGCATATTGATCTTGGCATTGTA 59.476 41.667 11.81 0.00 37.64 2.41
699 701 2.694628 TGTTGGGCATATTGATCTTGGC 59.305 45.455 0.00 0.00 35.37 4.52
744 746 9.699410 TTGTAGAGAATCATTAATTGTTGGGAT 57.301 29.630 0.00 0.00 37.82 3.85
763 782 6.873605 TCCACATGTTCAATGTAGTTGTAGAG 59.126 38.462 0.00 0.00 38.95 2.43
771 790 6.157904 TGCAAATTCCACATGTTCAATGTAG 58.842 36.000 0.00 0.00 0.00 2.74
780 799 4.281435 TCACTTGATGCAAATTCCACATGT 59.719 37.500 0.00 0.00 0.00 3.21
796 815 5.070981 AGACTTGGAAGACTTCATCACTTGA 59.929 40.000 16.85 0.00 0.00 3.02
805 862 2.987821 GCACGTAGACTTGGAAGACTTC 59.012 50.000 6.66 6.66 33.32 3.01
830 887 1.416401 TGGACAGTGGACTTGGAAGAC 59.584 52.381 0.00 0.00 0.00 3.01
831 888 1.694150 CTGGACAGTGGACTTGGAAGA 59.306 52.381 0.00 0.00 0.00 2.87
832 889 1.417890 ACTGGACAGTGGACTTGGAAG 59.582 52.381 3.82 0.00 40.75 3.46
836 893 1.949525 CCAAACTGGACAGTGGACTTG 59.050 52.381 5.63 6.67 40.96 3.16
838 895 1.507140 TCCAAACTGGACAGTGGACT 58.493 50.000 5.63 0.00 42.67 3.85
1033 2889 1.107538 CCGGCGAGTAGGAGAATGGA 61.108 60.000 9.30 0.00 0.00 3.41
1263 3125 1.245376 TGGACTGGCACGTCGTGATA 61.245 55.000 28.83 14.67 35.23 2.15
2010 3914 3.213264 CCACTTCATGGGCATGCC 58.787 61.111 29.47 29.47 45.95 4.40
2076 3984 6.006449 ACCAAGCATCCATATCATTTCTACC 58.994 40.000 0.00 0.00 0.00 3.18
2213 4121 9.355916 GTCAGATTTTTAGCCCTAAAATATCCT 57.644 33.333 12.48 6.44 42.48 3.24
2455 4863 3.247173 CCTAACTTTGCATCTCGCTGATC 59.753 47.826 0.00 0.00 43.06 2.92
2522 4931 3.488489 GATTGTTTCGTGCCACACATAC 58.512 45.455 0.00 0.00 33.40 2.39
2523 4932 2.486203 GGATTGTTTCGTGCCACACATA 59.514 45.455 0.00 0.00 33.40 2.29
2525 4934 0.665835 GGATTGTTTCGTGCCACACA 59.334 50.000 0.00 0.00 33.40 3.72
2534 4943 4.600012 ATGTTAAGCTCGGATTGTTTCG 57.400 40.909 0.00 0.00 0.00 3.46
2615 5025 6.638610 ACATGGCAATTTTATTTTCGGATGA 58.361 32.000 0.00 0.00 0.00 2.92
2667 5078 1.669604 TGGCAAGTTTAGTGACGCAA 58.330 45.000 0.00 0.00 0.00 4.85
2668 5079 1.890876 ATGGCAAGTTTAGTGACGCA 58.109 45.000 0.00 0.00 0.00 5.24
2669 5080 4.413495 TTTATGGCAAGTTTAGTGACGC 57.587 40.909 0.00 0.00 0.00 5.19
2670 5081 6.202937 TGTTTTTATGGCAAGTTTAGTGACG 58.797 36.000 0.00 0.00 0.00 4.35
2680 5092 7.326547 GGCAATTTCAAATGTTTTTATGGCAAG 59.673 33.333 0.00 0.00 0.00 4.01
2682 5094 6.263842 TGGCAATTTCAAATGTTTTTATGGCA 59.736 30.769 1.85 1.85 37.30 4.92
2683 5095 6.675987 TGGCAATTTCAAATGTTTTTATGGC 58.324 32.000 0.00 0.00 0.00 4.40
2685 5097 9.119329 CACATGGCAATTTCAAATGTTTTTATG 57.881 29.630 0.00 0.00 29.20 1.90
2686 5098 8.848182 ACACATGGCAATTTCAAATGTTTTTAT 58.152 25.926 0.00 0.00 29.20 1.40
2687 5099 8.218338 ACACATGGCAATTTCAAATGTTTTTA 57.782 26.923 0.00 0.00 29.20 1.52
2697 5109 2.861750 GCACGAACACATGGCAATTTCA 60.862 45.455 0.00 0.00 0.00 2.69
2699 5111 1.605202 GGCACGAACACATGGCAATTT 60.605 47.619 0.00 0.00 40.91 1.82
2729 5141 1.409521 CCCCCTGAAAAGTGTCACACA 60.410 52.381 11.40 0.00 36.74 3.72
2730 5142 1.318576 CCCCCTGAAAAGTGTCACAC 58.681 55.000 0.00 0.00 34.10 3.82
2793 5205 5.270853 CGAATTTCAGTCGGTCAAACTTTT 58.729 37.500 0.00 0.00 34.85 2.27
2848 5262 2.591753 CCCGTCCATCATGCAGGT 59.408 61.111 0.00 0.00 0.00 4.00
2849 5263 2.903855 GCCCGTCCATCATGCAGG 60.904 66.667 0.00 0.00 0.00 4.85
2864 5284 1.453197 CCGGAATACTGTTGGGGCC 60.453 63.158 0.00 0.00 0.00 5.80
2880 5300 2.125673 AATCTTGACCCGCGACCG 60.126 61.111 8.23 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.