>input_sequence_65902
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------------------------------ATGGCTTGTAAACTC-----------------------------------
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----------------------------------------------------------------------AAATGGTCTC
CTCTCCTCTCCATTCTCCTACTCGCCGGCATGGTTGGCATCTCCCATGCCGGCAACATCGCCGTCTACTGGGGCCAGAAC
GGTAACGAGGGCACGCTCGCCGACGCCTGCAACTCCGACCTCTACGCGTACGTCATGGTCTCCTTCCTCAGCACCTTCGG
CAATGGC---CAGACCCCCGCACTCAACCTCGCCGGACACTGCGATCCGCTCTC---CGGCAACTGCAACGTTTTCAGCT
CCGATATCACGACGTGCCAGTCCAACGGCGTCAAGGTGCTCCTCTCTCTCGGCGGCGGCGCCGGCAGCTACGGCCTTTCC
TCCACCGAGGACGCCCAGAGCGTCGCCACCTACCTGTGGGACAACTTCCTCGGCGGCAGCTCGT------------CGTC
CCGCCCGCTCGGCGACGCCGTCCTGGACGGCATCGACTTCGACATCGAGACGGGCAACTCGGCGCACTACGACGAGCTGG
CCACGTTCCTGTCACAGTACAGCGCGCAGGG---------------CAGGAAGGTGTACCTGACGGCGGCGCGGCAGTGC
CCGTACCCGGACGCGTCGCTGGGGCC---------GGCGCTGCAGACGGGGCTGTTCGACAACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGCGAG---CGGGGACGCGAGCAACCTGCAGAGCGCGTGGAATACGTGGACGAGCAGCG
TGAAGGTGTCTGGAGGCTTCTACCTCGGCATGCCGGCCTCGACGGCCGCGGCCGGGAGCGGGTACGTGTCGCCTGGCGAC
CTCACGTCGGCGGTGCTCCCCGGCGTGAAGGGCGCCAGCAACTACGGTGAGATCATGGTGTGGGACCGCTACAACGACGT
GCAGAACAGCTACAGCAGCCAGGTGAAGGATAGCGTCTGA----------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3B_1_TraesCS3B01G267700
TTGCCTGACTTGCGACATTGCTTTCAATGCGGTTATGCCTCTAAGCCGTGCCTCGACACGTGGGAGCTATAGCCGCATCG
AGGGTGTTACACGCAACTAGCTTGGTTCCCTCTCACTAGCTCCCCGACCCAGTTTTTTTTTGCGAGATAGCCCCCCAATC
CAGTTACCGTCGCTGATTTTGCCCAGTATTACATGAGTCATTGACGCCATATCATCATTCTTAGTATTTCCTCCGTTCTT
AAATATTTGTCTTTCTAGATATTTCAACAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAAATATGTCT
ATATACATCCGTATGTGGTGGTCCATTTGAAATCTCTAAAAAAACAAATATTTAGGAACGGAGGGAGTACATGATTTGCT
ACATTTTCTGTGCATGATTTTTCCCGCAACTTAAGGATAATGATGCCATGCCGTGTTTCTAGCCATGAAAAAAATGTACT
ATTGCATAGTAGATGATCTTCAAATTCTTTTCATTTCTTTAAGCTATTTTAGATATTGCTACTGTGATAGGGAAAAAAAG
CTCTTGCTATGTGAACGTTTTAGATATCACGTTGGGGAAAAAAATTGAACACCCAAGTTCGAAATCCTGGATCCGCCACT
GCTCCCGGTCTGCGTACTTGCCAAACTTCCTG-AAAACAGCTCGCTGAAAATTGTACAATGCCAAGATCAATATGCCCAA
CATTTAATGATTTTGTACAAGTATAA-----------------TCCCAACAATTAATGATTCTCTACAACTACATTGAAC
ATGTGGAATTTGCATCAAGT--------------------------------------GATGAAGTCTTCCAAGTCTACG
TGCCAAGTCTTCCAAGTC------------CACTGTCCAGTTTGGAAAAAGCCAACGCCAAACTTGGAACCATTCAACGA
TTCGTCCCTATAAATGG--CCCACAACACCTCTTCACCGCCAAGCAAATCACGTACTAAGACAAAGCATTCGCAAAAGCT
TTACCATCTCGTGCATCGCCGTGACTAACAATGGCTTGTAAACTC-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AAATGGTCTC
CTCTCCTCTCCATTCTCCTACTCGCCGGCATGGTTGGCATCTCCCATGCCGGCAACATCGCCGTCTACTGGGGCCAGAAC
GGTAACGAGGGCACGCTCGCCGACGCCTGCAACTCCGACCTCTACGCGTACGTCATGGTCTCCTTCCTCAGCACCTTCGG
CAATGGC---CAGACCCCCGCACTCAACCTCGCCGGACACTGCGATCCGCTCTC---CGGCAACTGCAACGTTTTCAGCT
CCGATATCACGACGTGCCAGTCCAACGGCGTCAAGGTGCTCCTCTCTCTCGGCGGCGGCGCCGGCAGCTACGGCCTTTCC
TCCACCGAGGACGCCCAGAGCGTCGCCACCTACCTGTGGGACAACTTCCTCGGCGGCAGCTCGT------------CGTC
CCGCCCGCTCGGCGACGCCGTCCTGGACGGCATCGACTTCGACATCGAGACGGGCAACTCGGCGCACTACGACGAGCTGG
CCACGTTCCTGTCACAGTACAGCGCGCAGGG---------------CAGGAAGGTGTACCTGACGGCGGCGCGGCAGTGC
CCGTACCCGGACGCGTCGCTGGGGCC---------GGCGCTGCAGACGGGGCTGTTCGACAACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGCGAG---CGGGGACGCGAGCAACCTGCAGAGCGCGTGGAATACGTGGACGAGCAGCG
TGAAGGTGTCTGGAGGCTTCTACCTCGGCATGCCGGCCTCGACGGCCGCGGCCGGGAGCGGGTACGTGTCGCCTGGCGAC
CTCACGTCGGCGGTGCTCCCCGGCGTGAAGGGCGCCAGCAACTACGGTGAGATCATGGTGTGGGACCGCTACAACGACGT
GCAGAACAGCTACAGCAGCCAGGTGAAGGATAGCGTCTGAGTCTTCGCGCGCGCGCGCGGGAAGTGCGACCGTG-CACTA
CACAATAAATCACTCTTTTCTTGACATACAATAAATCAGATATAGGAGTAT--ATAATACTTCTACTACATATGG----C
ATGCCCATGAAGTGGCTAAGTTGATTTGGGACTGGATAATAAGAGCGGGCGAGCTTGGGTCGTGGTAGAAATGATATGGA
TGCTTGGTGTACACTTGCAACACATGCCCTGAGATAAATAAAGTAATTTGGTATCCATCCGGGTTACTATTACACTGTTA
CTACATTCAAAAATAAAGGATTTCAATACAAATCTGACGTAGGATATTTTAGGGCTAAAAAT-CTGACGCCCTCAGGTAC
GTCAAATCCAGATCGAACGTATGGCAATTAATCGTTGTAGCATGGTATTTTTTTTCTGTTGATTTTTTACGTTACATGGG
CATTTTTACTGTAGAACATGGCAAATCCTATGCCGAAAGCATGGTAATTTTATCT-TTTTTGCATGGCAAATCTGGCCGT
TACTTTTAGCGCTTAAAACCTTGTGGATA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CATATTGTGCGCACTGATCAGCGAGATGCAAAG
TTAGGGTAAAAAA-ACATCAACTAATATTTTGACCCAAATGATAAGTGCCGTATGTGTGGCACGAAACAATCCGAGCTTA
ACATTTTTTTC-AACTAAAGTTGTCATCCGAAAAGGAAAAAAATCCTAAAAAAACTGAAACTTGTCATCCGAAAATAAAA
TTG-CCATGTTTAACAACTAAAGTTGTCATCCTCGCCTTGCGTCACT-AAACTTGCCATAAAAACATTTGAAATTGCCAT
GTGTTCGTGCCACACGTGTGTGTGTGACACTTTTCAGGGGGTCCTATTTTGATGACTAATCAGAATTTTCACATCAACTA
ATAAAAAAGTTTGACCGACTGAA--ATTCGGTCACCAGTCTCACGACGACTAAGCGTTAACAC------CTGCATGATGG
ACGGGCCCCAACAGTATTCCGGTCGCGGGTCAAGATTCC
>chr3A_642
--------------------------------------------------------------------------------
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-CTCCCGGTCTGCATACTTGCCAGACTTCCAG-AAAACAGCTCGCTGAAAATTGGATGATCCCAATATCAATATGCCCAA
CATTTAATGATTTTGTACAAGTATAGTCCTTCTACAAGTATAGTCCCAACAATTAATGATTTTCTACAAGTACATTGAGC
ATGTGGAATTTGCACCAAGTAAGCGATCAAATCTTCCATTCCCCGCAAAAAAAAAAGCGATCAAATCTTCCAAGCCTCCG
TGCCAAACTTCCTAGGTACGGT------AACACTGTCCACTTTGAAAAGAGCCAACTCCAAACTTGGAACCATTCAACGA
TTCGTCCCTATAAATGGTACCCACAATACCTCTTCATCGCCAAGCAAATCACGTACTA---CAAAGTATTCGTAAAAGCT
TGACCATCTGGTGCGTCGCTGTGACTAACAATGGCTTGTGAACTC-----------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------AAATGGTCTC
CTCTCCTCCCCATTCTCCTACTCGCCGGCATGGTTGGCATCTCCCACGCCGGCAACATCGCCGTCTACTGGGGCCAGAAC
GGTAACGAGGGCACGCTCGCCGACGCCTGCAACTCCGGCCTCTACGCGTACGTCATGGTCTCCTTCCTCAGCACCTTCGG
CAATGGC---CAGACCCCCGCCATCAACCTCGCCGGACACTGCGATCCGCTCTC---CGGCAACTGCAACGTCTTCAGCT
CCGACATCACGACGTGCCAGTCCAACGGCGTCAAGGTGCTCCTCTCTCTCGGCGGCGGCGCCGGCAGCTACGGCCTTTCC
TCCAGCGAGGACGCCCAGAGCGTCGCCACCTACCTGTGGGACAACTTCCTCGGCGGCAGCTCGT------------CGTC
CCGCCCGCTCGGCGACGCCGTCCTGGACGGCATCGACTTCGACATCGAGACGGGCAACTCGGCGCACTACGACGAGCTGG
CCACGTTCCTGTCACAGTACAGCGCGCAGGG---------------CAGGAAGGTGTACCTGACGGCGGCGCCGCAGTGC
CCGTACCCGGACGCGTCGCTGGGGCC---------GGCGCTGCAGACGGGGCTGTTCGACAACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGCGAG---CGGGGACGCGAGCAACCTGCTGAGCGCGTGGAACACGTGGACGAGCAGCG
TGAAGGTGTCCGGGGGCTTCTACCTCGGCGTGCCGGCCTCGACGGCCGCGGCCGGGAGCGGGTACGTGTCGCCTGGCGAC
CTCACGTCGGCGGTGCTCCCCGGCGTGAAGGGCGCCAGCAACTACGGTGGGATCATGGTGTGGGACCGCTACAACGACGT
GCAGAACAGCTACAGCAGCCAGGTGAAGGATAGCGTCTGAGTCTTCGCGCGCGCGCGGGGGAAGTGCGACCATG-CACTA
CACAATAAATCAC--------------------------ATACAGGAGTATAAATAATACTTCTACTACATATTACGTAC
ATGCCCATGAAGTGGCTAAGTTGATTTGGGGCTGGATAATAAGAGCGGGCGAGCTTGGGTCGTAGCAGAAATGATATGGA
TGCTTGGTGTACACTTGCAACACATGCCCTGAGATAAATAAAGTAATTTGGTATCCATCCGGGTTACTATTACACTGTTA
CTACATTCGAAAATAAAGGATTTCAATACAAATCTGACGTTGGATATTTTAGGGCTAAAAAT-CTGACGCCCTCAGGTAC
GTCAAATCCAGGTCGAACATATGGCAATTAATCGCTGTAGCATGGTAA--TTTTTCTGTTGATTTTTTACGTTACATGGG
CATTTTTACTGTAGAACATGGCAAATCCTATGCACAAAGCATGGTAATTTTATCT-TTTTTGCATGGCAAATCTGGCCGT
TACTTTTAGCGTTTAAAACCTTGTGGATA---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------CATATCGTGCGCACTAATCAGCGAGATGCAAAG
TTAGGGTAAAAAAAACATCAACCAATATTTTGACCCAAATGATAAGTGTCACACGTGTAGCAAGAAGCAATCCGGCCCTG
ACA-TTTTTTTTAACTAAAGTTGTCATTCAAAAAGAAAAAAAATCTTT-AAAAACTGAAGCTTGCCATCCGAATAAGAAA
TTTATCATGCTTAACAACTAAAGTTATCATCCTCGC-----GTCACT-AAATTGCCATAGAAAACATTCAGAATTGCCAT
G--------------------------CACTTTTCAGGGGGTCCTATTTTGATGACTAATCAGAATTTTCACATCAACTA
ATAAGACAGTTTGATCGACTGAAATATTCGGTCATCAGTCTCACGACGACTAAGCGTAAGCGTTAAAGACTGCATGATGG
ACGTGCCCCAACAGTATTC-GGTCGCAGGTCAAGATT--
>chr3D_643
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--TCCCAGTATGTGTAGTTGCCAAACTTCCTGAAAAACAGCTCGCTGAAAATTAAACAATCCCAAGATCAATATGCCAAA
CATTTAATGATTTTGTACAAGTATAC-----------------TCCCAACAATTAATGATTTTCTACAAGTACATTGAGC
ATGTGGAATTTGCACCAAGT--------------------------------------GATCAAGTCTTCCAAGTCTACG
TGCCAAACTTTCTAGGTACGGTAGAACAAACACTGTCCAGTTTGGAAAAAGCCAACGCCAAACTTGGAACCATTCAACAA
TTCGTCCCTATAAATGGCACCCACAACACCTCTTCACCGCCAAGCAAATCACGTACTAAGACAAAGCATTGGCAAAAGCT
TTACCATCTCGTGCATCGCCGTGACTAACAATGGCTTGTAAGCTCAAATGGTTGTTAGTAGTAATCTTGACATGCATAGA
TTGTTAGCCGCATGCATACAGGAGCGTGGATCACGGTCAGTTAGCCGGGCCATATTCAGTTGGTTGGCTGGCTTGATGTG
TTCAGGTTGTTAGCTAGCTTTGTGCATGAAATTGTGAGTGGACTCGGTCATTAGAGGATAACCACCATGATGGAGTAGTG
GCCGGTGTGTTGGCCGGATCGTGCATGCATGGATGCATGCAAGTTAGTTGGATTAGTAGGAGTTAGAGAGTTGTGAGATG
CAACTAGAGGGAGGAAGACGACGCGGCGCTGCGAGGAGGCGGCGCCAAAAATTGGTATTCAGAGCCACAAGGTTCGAGGG
GCGGCCGTGGCGCGCGGTGGCGTCCGCGGCGAGTACGGTGTGCGCGGCCGACATGGAGGCATCGGCTGCGACGCGCGGCG
AGCGCGTGGCGACGGCAACGCGCGGCGAGTCCATGGCTGTGCGGTGTGATGTTGTGCGCGCGAAGGGCACGGCAGTCGTG
GAGACGAGGAGGTCGCGAAGGACCTGCGTGGTGGCGCAGAGGTCGCGACGGCTCGGCGCGACAACCGTGGAGGCGCGTGG
CACGGAGACGCGGCGTGGCGGCGCACGGGACTGCGGGCTGCTGCAGCGCCAGCGAGTGGCGGCTTGTGCCGGAGACGCAG
CGGAGGCGTACATGGCGACGAGGCGACGACGAGGAGCCAGGGCCCCTGTCGGCAGGCCGTGCGGCGAGGCCACGGCTTAG
GGGGTGAGTGTTGGCCAGAATAAGCCGCGGCGCCAGTGTCGGACACGTTGGGCGCGTGTATAGGCGCGTGCCGGGTGTGT
CAGGCGCGGCGGGACCGCGGTGTAGGCGTGTGTGGTCGGGCTCGTCGGGCGCGACGGATTCGCGCGGGACGTGCGGGACG
CACGGGTGCAGTCGGGCTCGTCGGGCGCGTCGGGTACGTGCGGGACGCACTGGTGCGGTCGGGCTCGTCGGGTACGCCGG
GTGCGCGCGGAACGCGCGGGGCGTAGAGGGACGTCAGGCGTGTGTTGCCGGCGGAGGAGGAGCTCGGCGTATGTCGCCGG
AGACGTGATGGGGCACGATGGGACCGGCGTCAGTGCGTCAGGTCAGGTCCGTGGCGGTGAGACCGGCGTCGTTGCGCCAG
GTCGAGTCCGCGGGTTGGGTCACGGTCGTGGCGACGACGACGACGGGAGCTGCGACAACTCCGGCGAAGGCAAGTCAAGA
TTAGAAGGGAAAATGTTAGTAGTAATCTTGACATGCATAGATTGTTAGCCGCATGCATACAGGAGCGTGGATCACGGTCA
GTTAGCCGGGCCATATTCAATTGGTTGGCTGACTTGATGTGTTCAGGTTGTTGGCTAGCTTTGTGCATGAAATTGTGAGT
GGACTCGGTCATTAGAGGATAACCACCACGATGGAGTAGTGGCCGGTGTGTTGGCCGGATCGTGCGTGCATGGATGCATG
CAAGTTAGTTGGATTAGTAGGAGTTAGCAGCCGAGTGTGGCGGCTGGCCAGTGCGTGTGTGAGTCTTCTGTACTGGTATT
TAAAGTGATCAGGTGAATGAGAAAGAGCGGCCGTGTGGGCTGAGAAAACAATGTAGTGCTTGTGGGTGCCAAGGGAGAGT
CTCGGCAAAGCCTGTGTGTTCTTTTTTGGTGTATATGCGTGCGTGTGTGTAAAGTTCATTACCATGTGTGTGTTTGTGAG
AGAAGAGAAGAGAGAAACCTCAGCAGAGTTGTGAGATCTAACTAGAGGGAGGAAGACGACGCGGCGCCAAAAATGGTCTC
CTCTCCTCCCCATTCTCCTACTCGCCGGCATGGTTGGCATCTCCCAAGCCGGCAACATCGCCGTCTACTGGGGCCAGAAC
GGTAACGAGGGCACGCTCGTCGACGCCTGCAACTCCGGCCTCTACGCATACGTCATGGTCTCCTTCCTCAGCACCTTCGG
CAATGGC---CAGACCCCCGCACTCAACCTCGCCGGACACTGCGATCCGCTCTC---CGGCAACTGCAACGTCTTCAGCT
CCGACATCACGACGTGCCAGTCCAACGGCGTTAAGGTGCTCCTCTCTCTCGGCGGCGGCGCCGGCAGCTACGGCCTCTCC
TCCACCGAGGACGCGCAGAGCGTCGCCACCTACCTGTGGGACAACTTCCTCGGCGGCAGCGCGT------------CGTC
CCGCCCGCTCGGCGACGCCGCCCTGGACGGCATCGACTTCGACATCGAGACGGGCAACTCGGCGCACTACGACGAGCTGG
CCACGTTCCTGTCCCAGTACAGCGCGCAGGG---------------CAGGAAGGTGTACCTGACGGCGGCGCCGCAGTGC
CCGTACCCGGACGCGTCACTGGCGCC---------GGCGCTGCAGACGGGGCTGTTCGACAACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGCGAG---CGGGGACGCGAGCAACCTGCAGAGCGCGTGGAACACGTGGACGAGCAGCG
TGAAGGTGTCCGGGGGCTTCTACCTCGGCGTGCCGGCCTCGACGGCCGCGGCCGGGAGCGGGTACGTGCCGCCTGGCGAC
CTCACGTCGGCGGTGCTCCCCGGCGTGAAGAGCGCCAGCAACTACGGTGGGATCATGGTGTGGGACCGCTACAACGACGT
GCAGAACAGCTACAGCAGCCAGGTGAAGGATAGCGTCTGAGTCTTCGCGCGCGCGCGCGGGAAGTGCGATCATACCACTA
CACAATAAATCAC--------------------------ATATAGGAGTATA--TAATACTTCTACATAT-------TAC
ATGCCCATGGAGTGGCTAAGTTGATTTGGGACTGGATAATAAGAGCGGGCGAGCTGGGGTCGTAGTAGAAATGATATGGA
TGC--GGTGTACACTTGCAACACATGCCCTGAGATAAATAAAGTAAT---------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3B_1069
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-------------------------------------------CCACGGCGGCAGCATCGCCATCTACTGGGGCCAGAAC
GGCAACGAGGGCACCCTGGCCGAGACCTGCAGCACCGGCAACTACGCCTTCGTCAACATCGCCTTCCTCTGCAGCTTCGG
GTCGGCCCAGGAGACCCCGCAGCTCAACCTGGCGGGCCACTGCGACCCCTACTC---CAACGCCTGCACCAACCTCACCG
CCGACATCAACCTCTGCCAGTCCAAGGGCGTCAAGGTCATGCTCTCCATCGGCGGGGGCGCCGGCGGGTACACGCTCAAC
TCCGAGCAGGACGCGGCCGACCTGGCCAAGTACATCTGGGACAGCTTCCTCGGCGGGAGCTCACCCAAG-----------
-CGGCCGCTCGGCGCCGCCGTACTCGACGGCGTCGACTTCGACATCGAGGGAGGGAACCCAGACTACTACGGCGCCCTGG
CGGCGCACCTCAAGGCCTACGGCG------GCAAGGGGGGCAGCAAGG---AGGTGTACCTGTCGGCGGCGCCGCAGTGC
CCGTTCCCGGACCAGT---------GGGTCGGCAAGGCGCTCCAGACCGGCCTCTTCGACTACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGTGCA---GGGGGACACGGCCAACCTCATGGACTCGTGGAAGCAGTGGACGTCGGGGG
TCCACGCCAAGTACATCTT---CCTCGGGCTGCCGGCGGCGCCGGCGGCCGCAGGGAGCGGGTTCATACCGGCGGGGAGC
CTGGAGTCGCAGGTGCTCCCGGCGCTCAAGGGCTCCAGCAAGTACGGAGGGGTGATGCTGTGG-----------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3B_1069
--------------------------------------------------------------------------------
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-------------------------------------------CCACGGCGGCAGCATCGCCATCTACTGGGGCCAGAAC
GGCAACGAGGGCACCCTGGCCGAGACCTGCAGCACCGGCAACTACGCCTTCGTCAACATCGCCTTCCTCTGCAGCTTCGG
GTCGGCCCAGGAGACCCCGCAGCTCAACCTGGCGGGCCACTGCGACCCCTACTC---CAACGCCTGCACCAACCTCACCG
CCGACATCAACCTCTGCCAGTCCAAGGGCGTCAAGGTCATGCTCTCCATCGGCGGGGGCGCCGGCGGGTACACGCTCAAC
TCCGAGCAGGACGCGGCCGACCTGGCCAAGTACATCTGGGACAGCTTCCTCGGCGGGAGCTCACCCAAG-----------
-CGGCCGCTCGGCGCCGCCGTACTCGACGGCGTCGACTTCGACATCGAGGGAGGGAACCCAGACTACTACGGCGCCCTGG
CGGCGCACCTCAAGGCCTACGGCG------GCAAGGGGGGCAGCAAGG---AGGTGTACCTGTCGGCGGCGCCGCAGTGC
CCGTTCCCGGACCAGT---------GGGTCGGCAAGGCGCTCCAGACCGGCCTCTTCGACTACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGTGCA---GGGGGACACGGCCAACCTCATGGACTCGTGGAAGCAGTGGACGTCGGGGG
TCCACGCCAAGTACATCTT---CCTCGGGCTGCCGGCGGCGCCGGCGGCCGCAGGGAGCGGGTTCATACCGGCGGGGAGC
CTGGAGTCGCAGGTGCTCCCGGCGCTCAAGGGCTCCAGCAAGTACGGAGGGGTGATGCTGTGG-----------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3A_1069
--------------------------------------------------------------------------------
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-------------------------------------------CCACGGCGGCAGCATCGCCATCTACTGGGGCCAGAAC
GGCAACGAGGGCACCCTGGCCGAGACCTGCAGCACCGGCAACTACGCCTTTGTCAACATCGCCTTCCTCTGCAGCTTCGG
GTCGGCCCAGCAGACCCCGCAGCTCAACCTGGCGGGCCACTGCGACCCCTACTC---CGACGCCTGCACCAACCTCACCG
CCGACATCAACCTCTGCCAGTCCAAGGGCGTCAAGGTGATGCTCTCCATCGGCGGGGGCGCCGGCGGGTACACGCTCAAC
TCCGAGCAGGACGCGGCCGACCTGGCCAAGTACATCTGGGACAACTTCCTCGGCGGGAGCTCGCCCAAG-----------
-CGGCCGCTCGGCGCCGCCGTGCTGGACGGCGTCGACTTCGACATTGAGGGAGGGAACCCGGACTACTACGGCGCGCTGG
CGGCGCACCTCAAGGCCTACGGCGGCAAGGGCAAGGGGGGCAGCAAGG---AGGTGTACCTGTCGGCGGCGCCGCAGTGC
CCGTTCCCGGACCAGT---------GGGTCGGCAAGGCGCTCGAGACGGGCCTCTTCGACTACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGTGCA---GGGGGACACGGCCAACCTCATGGACTCGTGGAAGCAGTGGACGTCGGGGG
TCCACGCCAAGTACATCTT---CCTCGGGCTGCCGGCGGCTCCGGCGGCGGCGGGGAGCGGGTTCATACCGGCGGGGAGC
CTGGAGTCGCAGGTGCTCCCGGCGCTCAAGGGCTCCAGCAAGTACGGAGGGGTGATGCTGTGG-----------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3D_1069
--------------------------------------------------------------------------------
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-------------------------------------------CCACGGCGGCAGCATCGCCATCTACTGGGGCCAGAAC
GGCAACGAGGGCACCCTGGCCGAGACCTGCAGCACGGGCAACTACGCCTTCGTCAACATCGCTTTCCTCTGCAGCTTCGG
GTCGGCCCAGGAGACCCCGCAGCTCAACCTGGCGGGCCACTGCGACCCCTACTC---CAACGCCTGCACCAACCTCACCG
CCGACATCAACCTCTGCCAGTCCAAGGGCGTCAAGGTGATGCTCTCCATCGGCGGCGGCGCCGGCGGGTACACGCTCAAC
TCCGAGCAGGACGCCGCCGACCTCGCGAAGTACATCTGGGACAGCTTCCTCGGCGGGAGCTCGCCCAAG-----------
-CGGCCGCTCGGCGCCGCCGTGCTCGACGGCGTCGACTTCGACATCGAGGGAGGGAACCCGGACTACTACGGCGCGCTGG
CGGCGCACCTCAAGGCCTACGGCGGCAAGGGCAAGGGGGGCAGCAAGG---AGGTGTACCTGTCGGCGGCGCCGCAGTGC
CCGTTCCCGGACCAGT---------GGGTCGGCAAGGCGCTCCAGACCGGCCTCTTCGACTACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACGTGCA---GGGGGACACGGCCAACCTCATGGACTCGTGGAAGCAGTGGACGTCGGGGG
TCCACGCCAAGTACATCTT---CCTCGGGCTGCCGGCGGCGCCGGCGGCGGCCGGGAGCGGGTTCATACCGGCGGGGAGC
CTGGAGTCGCAGGTGCTCCCGGCGCTCAAGGGCTCCAGCAAGTACGGAGGGGTGATGCTGTGG-----------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3B_1074
--------------------------------------------------------------------------------
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------------------------------------------------CCGCCAACATCGCCGTCTACTGGGGTCAGAAC
GCCACCGAGGGCACGCTCAGGGACACATGCGGCACCGGGCTCTACGCGTACGTCAACCTCGCGTTCCTCTCCATCTTCGG
CGCCGGC---CGTGCTCCGGTCCTCAACCTCGCTGACCACTGCGACCCCCCTTC---GGGGACTTGCGCGTCTCTCGCCG
CTGACATCGCGTCATGCCAGTCCGCCGGCGTGAAGGTGCTGCTCAGCATGGGCGGCGGCGCGCTCGGGTACAACCTGTCC
TCGCCCTCCGACGCGCAGGACGTGGCAACCTACCTATGGGACAACTTCCTCGGCGGCACCGTCGCCGGCGCCGCCGCGCC
CCGCCCGCTCGGCGACGCGGTGCTGGACGGTGTCGACTTCGACATAGAGGCCCCG---TCTCTGTACTACGACGACCTCG
CCAGGAGCCTGACGTCGCTGTA---CAAGGGCGACACCGGCGGCAAGA---AGTACATGCTCACCGCGGCGCCGCAGTGC
CCGTTCCCGGACACGTCTCTCAAG---------ACCGCGCTCGCCACGGGGCTGTTCGACCGCGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTTCGCGCA---CGGAGACGCGGGCACGCTGCAGAGCGCGTGGGGGCAGTGGACGGCGGCTC
TGCCGTCGGCGAGCGTA---TACCTCGGCCTGCCGGCGTCGCGGGATGCCGCCAGCAGCGGGTTCGTCGACGCGGACACG
CTCGTGTCGCAGGTGCTGCCGCTGGTGGAAGGCGCGCCCAATTACGGCGGGGTCATGCTGTGGAGCCGCTCCTACGAC--
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---------------------------------------
>chr3A_1074
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------------------------------------------------CCGCCAACATCGCCGTCTACTGGGGTCAGAAC
GCCACCGAGGGCACGCTCAGGGACACATGCGGCACGGGACTCTACGCTTACGTCAACCTCGCGTTCCTCTCCATCTTCGG
CGCCGGC---CGTGCTCCGGTCCTCAACCTCGCAGACCACTGCGACCCACCCTC---GGGGTCGTGCGCGACCCTCGCCG
CCGACATCGCGTCATGCCAGTCCGCCGGCGTGAAGGTGCTGCTCAGCATGGGCGGCGGCGCGCTCGGGTACAACCTGTCC
TCGCCCTCCGACGCGCAGGCCGTGGCCACCTACCTATGGGACAACTTCCTGGGCGGCACCGCCGCCGGCGCCGCCGCGCC
CCGCCCTCTCGGCGACGCGGTGCTGGACGGCGTCGACTTCGACATAGAGGCCCCG---TCGCTGTACTACGACGACCTCG
CCAGGAGCCTGACGTCGCTGTA---CAAGGGCGACACCGGCGGCAAGA---AGTACATGCTCACCGCGGCGCCGCAGTGC
CCGTTCCCGGACGCGTCCCTCAAG---------ACCGCGCTCGCCACGGGGCTGTTCGACCGCGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTTCGCGCG---CGGGGACGCGGGCACGCTCCAGAGCGCGTGGGGGCAGTGGACGGCGGCTC
TGCCGTCGGCGTTCGTG---TACCTCGGCCTGCCGGCGTCGCTGGATGCTGCCGGCAGCGGGTTCGTCGACGCGGACACG
CTCGTGTCGCAGGTGCTGCCGATGGTCGAAAGCGCGCCCAATTACGGCGGGGTCATGCTGTGGAGCCGCTCCTACGAC--
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3D_1074
--------------------------------------------------------------------------------
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------------------------------------------------CCGCCAACATCGCCGTCTACTGGGGTCAGAAC
GCCACCGAGGGCACGCTCAGGGACACATGCGGCACCGGTCTCTACGCCTACGTCAACCTCGCGTTCCTCTCCATCTTCGG
CGCCGGC---CGTGCCCCGGTCCTCAACCTCGCAGACCACTGCGACCCGCCCTC---GGGGTCGTGCGCGACCCTCGCCG
CCGACATCGGGTCCTGCCAGTCCGCCGGCGTCAAGGTGTTGCTCAGCATGGGCGGCGGCGCGCTCGGGTACAACCTCTCC
TCCCCCTCCGACGCGCAGGACGTGGCCACCTACCTATGGGACAACTTCCTCGGCGGCACCGGCGCCGG---CGCCGCGCC
CCGCCCGCTCGGCGACGCGGTGCTGGACGGCATCGACTTCGACATAGAGGCCCCG---TCCGAGCACTACGACGACCTCG
CCAGGAGCCTCACGTCGCTGTA---CAAGGGCGACACCGGCGGCAAGA---AGTACATGCTCACCGCGGCGCCGCAGTGC
CCGTTCCCGGACGCGTCCCTCAAG---------ACCGCGCTCGCCACGGGGCTGTTCGACCGCGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTTCGCGCG---CGGGGACGCGGGCACGCTGCAGAGCGCGTGGCGGCAGTGGACGGCGGCTT
TGCCGTCGGCGACAGTT---TACCTCGGCCTGCCGGCGTCGTCGGATGCTGCCGGCAGCGGGTTCGTCGACGCGGACACG
CTCGTGTCGCAGGTGCTGCCGCTGGTGGAAGGCGCGCCCAATTACGGCGGGGTCATGCTGTGGAGCCGCTCCTACGAC--
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---------------------------------------
>chr3D_1081
--------------------------------------------------------------------------------
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-------------------------------------------------------CATCGCGATCTACTGGGGCCAGAAC
GGCAACGAGGGCACGCTGGCGCAGGCGTGCGCGACGGGAAACTACAAGTTCGTCAACGTGGCCTTCCTCTTCACCTTCGG
CAAGGGC---CAGAAGCCGCTGCTGAACCTGGCCGGGCACTGCGACCCGGCGACCAGCGGCTCGTGCACCTTCGTGGGCG
CCGACGTCAAGTCCTGCCAGAGCCGCGGCATCAAGGTCCTGCTCTCCATCGGCGGCGGCGTCGGCAGCTACGGCCTCTCG
TCCGCCGCCGACGCCAAGCAGGTCGCGGAGTACCTCTGGGAGAACTACCTCGGCGGCACGTCGACGACG-----------
-AGGCCCCTCGGCGACGCGGTCCTCGACGGCGTCGACTTCGACATCGAGAGCGGCGGGAGCGCGCACTGGGACGACCTGG
CGCGGGAGCTCAAGAAGTACTCGG------GGAAGGGAAGCGCCTACAAGCCGGTGTACCTGGCGGCGGCGCCGCAGTGC
CCGTTCCCGGACGCGATGCTCGGCGGGCTCGGCGGCGCGCTCGGCACGGGGCTGTTCGACTACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTACACCAAGGCCGGCGGGGCGGGCAACCTGGCGAGCGCGTGG-------------------
--------------------------------------------------------------------------------
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---------------------------------------
>chr3A_1089
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------TCTACTGGGGCCAGAAC
GGCAACGAAGGCACGCTGGCGCAGACGTGCGCGAGCGGGAACTACAGGTTCGTCAACGTGGCCTTCCTGTACACCTTCGG
CAAGGGC---CAGACGCCGCTGCTGAACCTGGCGGGGCACTGCGACCCGGCGTCCAACGGCT---GCACCGGCGTGGGCG
CCGACGTCAGGTCCTGCCAGCGCCTCGGCGTCAAGGTCATGCTCTCCATCGGCGGCGGCGTCGGCAGCTACGGCCTCTCG
TCCCGCGCGGACGCCAGGCTGGTCGCGAGGCACCTCTGGGAGAACTACCTCGGCGGCACGTCCGCGACG-----------
-AGGCCCCTCGGCGACGCGGTGCTCGACGGCGTCGACTTCGACATCGAGAGCGGCGGGAGCGCGCACTGGGACGAGCTGG
CGCGGGAGCTCAAGAAGTATTCGG------GGAAGGGGCGCGAGCACAGGAAAGTGTACCTGGCGGCGGCGCCGCAGTGC
CCGTTCCCGGACGCGTCGCTCGGCGGGCTCGGCGGCGCGCTCGGCACGGGCCTGTTCGACTACGTGTGGGTGCAGTTCTA
CAACAACCCGCCGTGCCAGTAC----------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------
>chr3D_2132
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------TAAAGTAATTTGGCATCCATCCGGGTTAATTTTACACTATTA
CTACATTCGAAAATAAAGGATTTCAATACAAATCTGAGGTCAG-TATTTTAGGGCTAAAAATTCTGACGCTCTCAGGTAC
GTCAAATCCAGATCAAACGTATGGCAATTAATCGCTGTAGCATGATAA--ATTTTCTGTTGATTTTTTACGTTACATGGC
CATTTTCACTGTAGAACATGGCAAATCCTATGCACAAAGCATGGTAATTTTATCTGTTTTTGCATGGCAAATCTGGCCGT
TATTTTTAGCGCTTAAAATCTGACTTCAGATTTTTAACATTTCCGAAAATAAAAGTAGTACACTATTACTAATAGCCTAC
TTGGTAACCTTTGGGAAGAGGAACGGGCGTTTGTGCCAGGGAGTTCATCAACGGAGTAGTTGTGGGAAATAGAATTTACT
CCCATTCCCTTATTTGATATGCGATGGGAATTAGTTCGCGATAAAGGCCTACCCACAAATTAACAGTGTCCCCATGGGAA
GAAATTGATGATTGGCACTCTCAGCTCCCATTCCCTTCCTTCTTAAACTCCCGATCCCTCTTAACAATCAGTGGGCTTTT
ATTCTCCTTACTAAGGGTTTTTCTTCGAGGGGGGTTACGGGTATGTGTTCCTATCATTACACCAAAAATATTTGCCTTGC
ATCTGGTTTTGCGAGTGACACCAAAGTTAGCATTACAATAACAAAATAAATAGGCACTCTATCTTATTTTTGCCAAATAG
CGGACTAAGTAACAAGCACAGAAAACGTGCACCAAAATTTTGTCAGCCATATTGTGCGCACTAATCAGCGAGATGCAAAG
TTAGGGT-AAAAAAACATCAACCAATATTTTGACCCAAATGGTAAGTGCCACACGTGTGGCATGAAGCAATTCGGTCCTG
ACA-TTTTTTC-AACTAAAGTTGTCATCCAAAAAGAAAAGAAAAA-TAAAAAAACTGAAACTTGCCATCCGAAAAAAAA-
TTG-TCATGTTTAACAATTAAAGTTGTCATCCTCGC-----GTCACTGAACTTGCCATAAAAAATATTCGGAATTGCCAT
GTATTCGTGCCACACA------TGTGACACTTTTCAGGGGGTCCTATTTTGATGACTAATCAGAATTTTCACATCAACTA
ATAAGAAAGTTTGACCGACTGAAATATTCGGTCACCAGTCTCACGACGACTAAGCGTTAACT-------CTGCATGATGG
ACGTGCCCCAACAGTATTC-GGTCGCGGGTCGAGATT--
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S-----------------------------------------------------S-----S-------------------
-------------------------S-----------------------------------S-------S--------S-
--------------S----------------------------------------------S------------------
------SSS---S-S--S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------S-------------------------------------S---------------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------S------------------S--------------------------------------------------
-------------------------------------------------S------------------------------
-----------------------------------------------------------------------S--------
-------------SSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------SS-----
---------------------------------------------------------------S----------------
--------------------------------------------------------------------------------
--------S-------------------------------S---------------------------------------
----------------------------------S------------SSS------------------------------
---------------------------------SS---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
----------------------S---------------------------SS-S--------S---S-------SS-S-S
---S-------------------------S-----S---------S------------------S----------S----
----S-------------------------------SSSSS----------S-SS-SSS---------S-S---------
--S------------SSSSSSS----------------------------------------------------------
----S--------------------------------------------------------SS-----------------
---S---------------S-----------------SS
>forward_125
--------------------------------------------------------------------------------
-------------------------TTCCCTCTCACTAGCTCCCC-----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------
>reverse_2889
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------TCCATTCTCCTACTCGCCGG----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
>forward_641
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------AAATCCTGGATCCGCCACT
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------
>reverse_4934
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------TGTGTGGCACGAAACAATCC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------
