Multiple sequence alignment - TraesCS3B01G267500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G267500 chr3B 100.000 2918 0 0 1 2918 429969643 429972560 0.000000e+00 5389.0
1 TraesCS3B01G267500 chr3D 97.639 1906 41 4 662 2566 331014682 331016584 0.000000e+00 3267.0
2 TraesCS3B01G267500 chr3D 92.663 368 12 6 2549 2915 331016718 331017071 1.550000e-142 516.0
3 TraesCS3B01G267500 chr3D 93.201 353 18 4 1 350 330998902 330999251 5.580000e-142 514.0
4 TraesCS3B01G267500 chr3D 87.702 309 31 4 342 644 331004122 331004429 1.290000e-93 353.0
5 TraesCS3B01G267500 chr3D 100.000 28 0 0 390 417 594862775 594862802 5.000000e-03 52.8
6 TraesCS3B01G267500 chr3A 97.732 1852 39 3 716 2566 447495135 447496984 0.000000e+00 3184.0
7 TraesCS3B01G267500 chr3A 94.340 371 12 2 2549 2918 447497118 447497480 7.060000e-156 560.0
8 TraesCS3B01G267500 chr3A 91.530 366 29 2 66 430 447139134 447139498 1.210000e-138 503.0
9 TraesCS3B01G267500 chr3A 86.792 106 14 0 451 556 28138886 28138991 5.110000e-23 119.0
10 TraesCS3B01G267500 chr1B 85.849 106 15 0 451 556 323339624 323339519 2.380000e-21 113.0
11 TraesCS3B01G267500 chrUn 81.250 144 21 4 451 589 24959877 24959735 8.550000e-21 111.0
12 TraesCS3B01G267500 chr7D 86.735 98 13 0 459 556 46333842 46333745 3.070000e-20 110.0
13 TraesCS3B01G267500 chr5A 86.735 98 13 0 451 548 518944332 518944429 3.070000e-20 110.0
14 TraesCS3B01G267500 chr7B 85.047 107 15 1 451 556 48195432 48195326 1.110000e-19 108.0
15 TraesCS3B01G267500 chr1A 85.714 98 14 0 451 548 572158507 572158604 1.430000e-18 104.0
16 TraesCS3B01G267500 chr5D 83.962 106 17 0 451 556 124918148 124918253 5.140000e-18 102.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G267500 chr3B 429969643 429972560 2917 False 5389.0 5389 100.000 1 2918 1 chr3B.!!$F1 2917
1 TraesCS3B01G267500 chr3D 331014682 331017071 2389 False 1891.5 3267 95.151 662 2915 2 chr3D.!!$F4 2253
2 TraesCS3B01G267500 chr3A 447495135 447497480 2345 False 1872.0 3184 96.036 716 2918 2 chr3A.!!$F3 2202

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
325 326 0.031449 CTAGCGCTTCTAGAGTGGCC 59.969 60.0 18.68 0.0 46.12 5.36 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2133 2135 1.352083 TCCTTGAAGGTCTGGGTCAG 58.648 55.0 11.6 0.0 36.53 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 4.746361 ATCGCCAGATCTTGCTCG 57.254 55.556 16.07 6.75 29.44 5.03
23 24 2.119009 ATCGCCAGATCTTGCTCGA 58.881 52.632 16.07 11.40 35.70 4.04
24 25 0.461548 ATCGCCAGATCTTGCTCGAA 59.538 50.000 16.07 0.77 35.18 3.71
25 26 0.461548 TCGCCAGATCTTGCTCGAAT 59.538 50.000 16.07 0.00 30.86 3.34
26 27 1.134699 TCGCCAGATCTTGCTCGAATT 60.135 47.619 16.07 0.00 30.86 2.17
27 28 1.667724 CGCCAGATCTTGCTCGAATTT 59.332 47.619 16.07 0.00 0.00 1.82
28 29 2.538333 CGCCAGATCTTGCTCGAATTTG 60.538 50.000 16.07 0.00 0.00 2.32
29 30 2.421424 GCCAGATCTTGCTCGAATTTGT 59.579 45.455 11.43 0.00 0.00 2.83
30 31 3.486542 GCCAGATCTTGCTCGAATTTGTC 60.487 47.826 11.43 0.00 0.00 3.18
42 43 3.706698 CGAATTTGTCGGCTAGAGATCA 58.293 45.455 0.00 0.00 46.45 2.92
43 44 3.733224 CGAATTTGTCGGCTAGAGATCAG 59.267 47.826 0.00 0.00 46.45 2.90
44 45 2.586258 TTTGTCGGCTAGAGATCAGC 57.414 50.000 0.00 0.00 38.35 4.26
45 46 0.382158 TTGTCGGCTAGAGATCAGCG 59.618 55.000 0.00 0.00 40.05 5.18
46 47 1.284408 GTCGGCTAGAGATCAGCGG 59.716 63.158 0.00 0.00 40.05 5.52
47 48 1.899054 TCGGCTAGAGATCAGCGGG 60.899 63.158 10.07 0.76 40.05 6.13
48 49 2.925262 CGGCTAGAGATCAGCGGGG 61.925 68.421 0.00 0.00 40.05 5.73
49 50 2.341911 GCTAGAGATCAGCGGGGC 59.658 66.667 0.00 0.00 0.00 5.80
50 51 2.206536 GCTAGAGATCAGCGGGGCT 61.207 63.158 0.00 0.00 40.77 5.19
69 70 3.124921 CGGGGTGTTGGCGATGAC 61.125 66.667 0.00 0.00 0.00 3.06
70 71 3.124921 GGGGTGTTGGCGATGACG 61.125 66.667 0.00 0.00 42.93 4.35
71 72 2.358247 GGGTGTTGGCGATGACGT 60.358 61.111 0.00 0.00 41.98 4.34
72 73 2.677003 GGGTGTTGGCGATGACGTG 61.677 63.158 0.00 0.00 41.98 4.49
73 74 2.173382 GTGTTGGCGATGACGTGC 59.827 61.111 0.00 0.00 41.98 5.34
74 75 3.410516 TGTTGGCGATGACGTGCG 61.411 61.111 0.00 0.00 41.98 5.34
75 76 4.147322 GTTGGCGATGACGTGCGG 62.147 66.667 0.00 0.00 41.98 5.69
76 77 4.673298 TTGGCGATGACGTGCGGT 62.673 61.111 0.00 0.00 41.98 5.68
80 81 3.179265 CGATGACGTGCGGTGGTC 61.179 66.667 0.00 0.00 34.56 4.02
81 82 3.179265 GATGACGTGCGGTGGTCG 61.179 66.667 0.00 0.00 42.76 4.79
82 83 4.735132 ATGACGTGCGGTGGTCGG 62.735 66.667 0.00 0.00 39.69 4.79
84 85 4.041917 GACGTGCGGTGGTCGGTA 62.042 66.667 0.00 0.00 39.69 4.02
85 86 3.958822 GACGTGCGGTGGTCGGTAG 62.959 68.421 0.00 0.00 39.69 3.18
86 87 3.740397 CGTGCGGTGGTCGGTAGA 61.740 66.667 0.00 0.00 39.69 2.59
87 88 2.181021 GTGCGGTGGTCGGTAGAG 59.819 66.667 0.00 0.00 39.69 2.43
88 89 3.066190 TGCGGTGGTCGGTAGAGG 61.066 66.667 0.00 0.00 39.69 3.69
89 90 4.509737 GCGGTGGTCGGTAGAGGC 62.510 72.222 0.00 0.00 39.69 4.70
90 91 3.066190 CGGTGGTCGGTAGAGGCA 61.066 66.667 0.00 0.00 34.75 4.75
91 92 2.642254 CGGTGGTCGGTAGAGGCAA 61.642 63.158 0.00 0.00 34.75 4.52
92 93 1.905512 GGTGGTCGGTAGAGGCAAT 59.094 57.895 0.00 0.00 0.00 3.56
93 94 0.462047 GGTGGTCGGTAGAGGCAATG 60.462 60.000 0.00 0.00 0.00 2.82
94 95 0.249398 GTGGTCGGTAGAGGCAATGT 59.751 55.000 0.00 0.00 0.00 2.71
95 96 0.535335 TGGTCGGTAGAGGCAATGTC 59.465 55.000 0.00 0.00 0.00 3.06
96 97 0.535335 GGTCGGTAGAGGCAATGTCA 59.465 55.000 0.00 0.00 0.00 3.58
97 98 1.139058 GGTCGGTAGAGGCAATGTCAT 59.861 52.381 0.00 0.00 0.00 3.06
98 99 2.474816 GTCGGTAGAGGCAATGTCATC 58.525 52.381 0.00 0.00 0.00 2.92
99 100 2.107366 TCGGTAGAGGCAATGTCATCA 58.893 47.619 0.00 0.00 0.00 3.07
100 101 2.101415 TCGGTAGAGGCAATGTCATCAG 59.899 50.000 0.00 0.00 0.00 2.90
101 102 2.216898 GGTAGAGGCAATGTCATCAGC 58.783 52.381 2.43 2.43 0.00 4.26
102 103 2.420547 GGTAGAGGCAATGTCATCAGCA 60.421 50.000 11.09 0.00 0.00 4.41
103 104 1.747709 AGAGGCAATGTCATCAGCAC 58.252 50.000 11.09 5.86 0.00 4.40
104 105 0.737219 GAGGCAATGTCATCAGCACC 59.263 55.000 11.09 0.00 0.00 5.01
105 106 0.038599 AGGCAATGTCATCAGCACCA 59.961 50.000 11.09 0.00 0.00 4.17
106 107 0.454600 GGCAATGTCATCAGCACCAG 59.545 55.000 11.09 0.00 0.00 4.00
107 108 1.456296 GCAATGTCATCAGCACCAGA 58.544 50.000 5.58 0.00 0.00 3.86
108 109 1.400846 GCAATGTCATCAGCACCAGAG 59.599 52.381 5.58 0.00 0.00 3.35
109 110 2.708051 CAATGTCATCAGCACCAGAGT 58.292 47.619 0.00 0.00 0.00 3.24
111 112 0.322648 TGTCATCAGCACCAGAGTGG 59.677 55.000 0.00 0.00 44.69 4.00
112 113 0.610174 GTCATCAGCACCAGAGTGGA 59.390 55.000 0.00 0.00 44.69 4.02
113 114 1.209019 GTCATCAGCACCAGAGTGGAT 59.791 52.381 0.00 0.00 44.69 3.41
114 115 1.208776 TCATCAGCACCAGAGTGGATG 59.791 52.381 0.00 0.00 44.69 3.51
115 116 1.065636 CATCAGCACCAGAGTGGATGT 60.066 52.381 0.00 0.00 44.69 3.06
116 117 0.322648 TCAGCACCAGAGTGGATGTG 59.677 55.000 0.00 0.00 44.69 3.21
118 119 2.042831 GCACCAGAGTGGATGTGGC 61.043 63.158 0.00 0.00 46.53 5.01
119 120 1.681666 CACCAGAGTGGATGTGGCT 59.318 57.895 0.00 0.00 46.53 4.75
120 121 0.675837 CACCAGAGTGGATGTGGCTG 60.676 60.000 0.00 0.00 46.53 4.85
121 122 0.837691 ACCAGAGTGGATGTGGCTGA 60.838 55.000 0.00 0.00 46.53 4.26
122 123 0.107800 CCAGAGTGGATGTGGCTGAG 60.108 60.000 0.00 0.00 40.96 3.35
123 124 0.900421 CAGAGTGGATGTGGCTGAGA 59.100 55.000 0.00 0.00 0.00 3.27
124 125 1.134759 CAGAGTGGATGTGGCTGAGAG 60.135 57.143 0.00 0.00 0.00 3.20
125 126 0.177604 GAGTGGATGTGGCTGAGAGG 59.822 60.000 0.00 0.00 0.00 3.69
126 127 1.222936 GTGGATGTGGCTGAGAGGG 59.777 63.158 0.00 0.00 0.00 4.30
127 128 1.997311 TGGATGTGGCTGAGAGGGG 60.997 63.158 0.00 0.00 0.00 4.79
128 129 2.191641 GATGTGGCTGAGAGGGGC 59.808 66.667 0.00 0.00 0.00 5.80
129 130 3.746949 GATGTGGCTGAGAGGGGCG 62.747 68.421 0.00 0.00 0.00 6.13
149 150 2.361104 GCGGTGGGCAAGGATGAA 60.361 61.111 0.00 0.00 42.87 2.57
150 151 2.409870 GCGGTGGGCAAGGATGAAG 61.410 63.158 0.00 0.00 42.87 3.02
151 152 1.299648 CGGTGGGCAAGGATGAAGA 59.700 57.895 0.00 0.00 0.00 2.87
152 153 0.322456 CGGTGGGCAAGGATGAAGAA 60.322 55.000 0.00 0.00 0.00 2.52
153 154 1.467920 GGTGGGCAAGGATGAAGAAG 58.532 55.000 0.00 0.00 0.00 2.85
154 155 1.004745 GGTGGGCAAGGATGAAGAAGA 59.995 52.381 0.00 0.00 0.00 2.87
155 156 2.555227 GGTGGGCAAGGATGAAGAAGAA 60.555 50.000 0.00 0.00 0.00 2.52
156 157 3.157087 GTGGGCAAGGATGAAGAAGAAA 58.843 45.455 0.00 0.00 0.00 2.52
157 158 3.573967 GTGGGCAAGGATGAAGAAGAAAA 59.426 43.478 0.00 0.00 0.00 2.29
158 159 4.039124 GTGGGCAAGGATGAAGAAGAAAAA 59.961 41.667 0.00 0.00 0.00 1.94
179 180 6.959639 AAAAATTATACTCATCGTGGCCAT 57.040 33.333 9.72 0.00 0.00 4.40
181 182 7.672983 AAAATTATACTCATCGTGGCCATAG 57.327 36.000 9.72 6.80 0.00 2.23
182 183 6.605471 AATTATACTCATCGTGGCCATAGA 57.395 37.500 9.72 13.02 0.00 1.98
183 184 5.644977 TTATACTCATCGTGGCCATAGAG 57.355 43.478 9.72 16.14 0.00 2.43
184 185 1.043816 ACTCATCGTGGCCATAGAGG 58.956 55.000 22.40 19.76 41.84 3.69
185 186 1.332195 CTCATCGTGGCCATAGAGGA 58.668 55.000 21.59 21.59 41.22 3.71
186 187 1.271934 CTCATCGTGGCCATAGAGGAG 59.728 57.143 28.61 28.61 41.22 3.69
187 188 1.043816 CATCGTGGCCATAGAGGAGT 58.956 55.000 9.72 0.00 41.22 3.85
188 189 2.158519 TCATCGTGGCCATAGAGGAGTA 60.159 50.000 19.90 3.77 41.22 2.59
189 190 2.447408 TCGTGGCCATAGAGGAGTAA 57.553 50.000 9.72 0.00 41.22 2.24
190 191 2.742348 TCGTGGCCATAGAGGAGTAAA 58.258 47.619 9.72 0.00 41.22 2.01
191 192 3.305720 TCGTGGCCATAGAGGAGTAAAT 58.694 45.455 9.72 0.00 41.22 1.40
192 193 4.476297 TCGTGGCCATAGAGGAGTAAATA 58.524 43.478 9.72 0.00 41.22 1.40
193 194 5.084519 TCGTGGCCATAGAGGAGTAAATAT 58.915 41.667 9.72 0.00 41.22 1.28
194 195 6.250711 TCGTGGCCATAGAGGAGTAAATATA 58.749 40.000 9.72 0.00 41.22 0.86
195 196 6.722590 TCGTGGCCATAGAGGAGTAAATATAA 59.277 38.462 9.72 0.00 41.22 0.98
196 197 7.036220 CGTGGCCATAGAGGAGTAAATATAAG 58.964 42.308 9.72 0.00 41.22 1.73
197 198 7.331791 GTGGCCATAGAGGAGTAAATATAAGG 58.668 42.308 9.72 0.00 41.22 2.69
198 199 7.023120 TGGCCATAGAGGAGTAAATATAAGGT 58.977 38.462 0.00 0.00 41.22 3.50
199 200 7.038302 TGGCCATAGAGGAGTAAATATAAGGTG 60.038 40.741 0.00 0.00 41.22 4.00
200 201 6.819146 GCCATAGAGGAGTAAATATAAGGTGC 59.181 42.308 0.00 0.00 41.22 5.01
201 202 7.331791 CCATAGAGGAGTAAATATAAGGTGCC 58.668 42.308 0.00 0.00 41.22 5.01
202 203 5.470047 AGAGGAGTAAATATAAGGTGCCG 57.530 43.478 0.00 0.00 0.00 5.69
203 204 5.145564 AGAGGAGTAAATATAAGGTGCCGA 58.854 41.667 0.00 0.00 0.00 5.54
204 205 5.601313 AGAGGAGTAAATATAAGGTGCCGAA 59.399 40.000 0.00 0.00 0.00 4.30
205 206 6.270231 AGAGGAGTAAATATAAGGTGCCGAAT 59.730 38.462 0.00 0.00 0.00 3.34
206 207 6.231211 AGGAGTAAATATAAGGTGCCGAATG 58.769 40.000 0.00 0.00 0.00 2.67
207 208 5.411669 GGAGTAAATATAAGGTGCCGAATGG 59.588 44.000 0.00 0.00 38.77 3.16
208 209 5.937111 AGTAAATATAAGGTGCCGAATGGT 58.063 37.500 0.00 0.00 37.67 3.55
209 210 6.362248 AGTAAATATAAGGTGCCGAATGGTT 58.638 36.000 0.00 0.00 37.67 3.67
210 211 6.831868 AGTAAATATAAGGTGCCGAATGGTTT 59.168 34.615 0.00 0.00 37.67 3.27
211 212 5.514274 AATATAAGGTGCCGAATGGTTTG 57.486 39.130 0.00 0.00 37.67 2.93
212 213 2.570415 TAAGGTGCCGAATGGTTTGA 57.430 45.000 0.00 0.00 37.67 2.69
213 214 1.247567 AAGGTGCCGAATGGTTTGAG 58.752 50.000 0.00 0.00 37.67 3.02
214 215 0.609131 AGGTGCCGAATGGTTTGAGG 60.609 55.000 0.00 0.00 37.67 3.86
215 216 0.608035 GGTGCCGAATGGTTTGAGGA 60.608 55.000 0.00 0.00 37.67 3.71
216 217 0.804989 GTGCCGAATGGTTTGAGGAG 59.195 55.000 0.00 0.00 37.67 3.69
217 218 0.400213 TGCCGAATGGTTTGAGGAGT 59.600 50.000 0.00 0.00 37.67 3.85
218 219 1.626321 TGCCGAATGGTTTGAGGAGTA 59.374 47.619 0.00 0.00 37.67 2.59
219 220 2.039216 TGCCGAATGGTTTGAGGAGTAA 59.961 45.455 0.00 0.00 37.67 2.24
220 221 3.078837 GCCGAATGGTTTGAGGAGTAAA 58.921 45.455 0.00 0.00 37.67 2.01
221 222 3.694566 GCCGAATGGTTTGAGGAGTAAAT 59.305 43.478 0.00 0.00 37.67 1.40
222 223 4.157840 GCCGAATGGTTTGAGGAGTAAATT 59.842 41.667 0.00 0.00 37.67 1.82
223 224 5.336451 GCCGAATGGTTTGAGGAGTAAATTT 60.336 40.000 0.00 0.00 37.67 1.82
224 225 6.687604 CCGAATGGTTTGAGGAGTAAATTTT 58.312 36.000 0.00 0.00 0.00 1.82
225 226 7.151976 CCGAATGGTTTGAGGAGTAAATTTTT 58.848 34.615 0.00 0.00 0.00 1.94
226 227 8.301002 CCGAATGGTTTGAGGAGTAAATTTTTA 58.699 33.333 0.00 0.00 0.00 1.52
227 228 9.855021 CGAATGGTTTGAGGAGTAAATTTTTAT 57.145 29.630 0.00 0.00 0.00 1.40
230 231 8.129496 TGGTTTGAGGAGTAAATTTTTATCCC 57.871 34.615 0.00 0.00 0.00 3.85
231 232 7.953493 TGGTTTGAGGAGTAAATTTTTATCCCT 59.047 33.333 0.00 0.00 33.20 4.20
232 233 8.812972 GGTTTGAGGAGTAAATTTTTATCCCTT 58.187 33.333 0.00 0.00 31.76 3.95
250 251 7.344599 ATCCCTTTAAAGGATATAAGGGGTC 57.655 40.000 31.89 0.00 46.03 4.46
251 252 6.012771 ATCCCTTTAAAGGATATAAGGGGTCG 60.013 42.308 31.89 12.70 46.03 4.79
252 253 8.143418 ATCCCTTTAAAGGATATAAGGGGTCGA 61.143 40.741 31.89 17.03 46.03 4.20
256 257 9.654663 CTTTAAAGGATATAAGGGGTCGATTAG 57.345 37.037 7.37 0.00 0.00 1.73
257 258 6.622427 AAAGGATATAAGGGGTCGATTAGG 57.378 41.667 0.00 0.00 0.00 2.69
258 259 5.547631 AGGATATAAGGGGTCGATTAGGA 57.452 43.478 0.00 0.00 0.00 2.94
259 260 5.912103 AGGATATAAGGGGTCGATTAGGAA 58.088 41.667 0.00 0.00 0.00 3.36
260 261 5.720520 AGGATATAAGGGGTCGATTAGGAAC 59.279 44.000 0.00 0.00 0.00 3.62
261 262 5.393896 GGATATAAGGGGTCGATTAGGAACG 60.394 48.000 0.00 0.00 0.00 3.95
262 263 1.856629 AAGGGGTCGATTAGGAACGA 58.143 50.000 0.00 0.00 36.18 3.85
263 264 2.083628 AGGGGTCGATTAGGAACGAT 57.916 50.000 0.00 0.00 40.50 3.73
264 265 2.395619 AGGGGTCGATTAGGAACGATT 58.604 47.619 0.00 0.00 40.50 3.34
265 266 2.770232 AGGGGTCGATTAGGAACGATTT 59.230 45.455 0.00 0.00 40.50 2.17
266 267 3.962718 AGGGGTCGATTAGGAACGATTTA 59.037 43.478 0.00 0.00 40.50 1.40
267 268 4.406649 AGGGGTCGATTAGGAACGATTTAA 59.593 41.667 0.00 0.00 40.50 1.52
268 269 5.071384 AGGGGTCGATTAGGAACGATTTAAT 59.929 40.000 0.00 0.00 40.50 1.40
269 270 5.761726 GGGGTCGATTAGGAACGATTTAATT 59.238 40.000 0.00 0.00 40.50 1.40
270 271 6.261603 GGGGTCGATTAGGAACGATTTAATTT 59.738 38.462 0.00 0.00 40.50 1.82
271 272 7.201758 GGGGTCGATTAGGAACGATTTAATTTT 60.202 37.037 0.00 0.00 40.50 1.82
272 273 8.186163 GGGTCGATTAGGAACGATTTAATTTTT 58.814 33.333 0.00 0.00 40.50 1.94
317 318 3.912907 GGCCCGCTAGCGCTTCTA 61.913 66.667 31.35 0.00 38.24 2.10
318 319 2.355244 GCCCGCTAGCGCTTCTAG 60.355 66.667 31.35 16.14 46.01 2.43
319 320 2.846652 GCCCGCTAGCGCTTCTAGA 61.847 63.158 31.35 0.00 46.12 2.43
320 321 1.284408 CCCGCTAGCGCTTCTAGAG 59.716 63.158 31.35 14.66 46.12 2.43
321 322 1.448922 CCCGCTAGCGCTTCTAGAGT 61.449 60.000 31.35 0.00 46.12 3.24
322 323 0.317436 CCGCTAGCGCTTCTAGAGTG 60.317 60.000 31.35 13.36 46.12 3.51
323 324 0.317436 CGCTAGCGCTTCTAGAGTGG 60.317 60.000 26.07 0.00 46.12 4.00
324 325 0.596341 GCTAGCGCTTCTAGAGTGGC 60.596 60.000 18.68 0.00 46.12 5.01
325 326 0.031449 CTAGCGCTTCTAGAGTGGCC 59.969 60.000 18.68 0.00 46.12 5.36
326 327 1.725557 TAGCGCTTCTAGAGTGGCCG 61.726 60.000 18.68 2.53 36.37 6.13
327 328 3.064987 GCGCTTCTAGAGTGGCCGA 62.065 63.158 0.00 0.00 36.37 5.54
328 329 1.736586 CGCTTCTAGAGTGGCCGAT 59.263 57.895 0.00 0.00 32.09 4.18
329 330 0.318275 CGCTTCTAGAGTGGCCGATC 60.318 60.000 0.00 0.00 32.09 3.69
330 331 0.032815 GCTTCTAGAGTGGCCGATCC 59.967 60.000 0.00 0.00 0.00 3.36
331 332 1.403814 CTTCTAGAGTGGCCGATCCA 58.596 55.000 0.00 0.00 44.18 3.41
344 345 6.783708 TGGCCGATCCAAAAAGTTAATATT 57.216 33.333 0.00 0.00 43.21 1.28
345 346 6.568869 TGGCCGATCCAAAAAGTTAATATTG 58.431 36.000 0.00 0.00 43.21 1.90
346 347 6.153680 TGGCCGATCCAAAAAGTTAATATTGT 59.846 34.615 0.00 0.00 43.21 2.71
347 348 6.475402 GGCCGATCCAAAAAGTTAATATTGTG 59.525 38.462 0.00 0.00 34.01 3.33
348 349 6.475402 GCCGATCCAAAAAGTTAATATTGTGG 59.525 38.462 0.00 6.20 0.00 4.17
349 350 6.475402 CCGATCCAAAAAGTTAATATTGTGGC 59.525 38.462 0.00 0.00 0.00 5.01
350 351 6.475402 CGATCCAAAAAGTTAATATTGTGGCC 59.525 38.462 0.00 0.00 0.00 5.36
351 352 6.043854 TCCAAAAAGTTAATATTGTGGCCC 57.956 37.500 0.00 0.00 0.00 5.80
352 353 5.046231 TCCAAAAAGTTAATATTGTGGCCCC 60.046 40.000 0.00 0.00 0.00 5.80
353 354 5.182487 CAAAAAGTTAATATTGTGGCCCCC 58.818 41.667 0.00 0.00 0.00 5.40
354 355 4.346478 AAAGTTAATATTGTGGCCCCCT 57.654 40.909 0.00 0.00 0.00 4.79
355 356 5.475398 AAAGTTAATATTGTGGCCCCCTA 57.525 39.130 0.00 0.00 0.00 3.53
356 357 5.475398 AAGTTAATATTGTGGCCCCCTAA 57.525 39.130 0.00 0.00 0.00 2.69
357 358 5.679817 AGTTAATATTGTGGCCCCCTAAT 57.320 39.130 0.00 0.00 0.00 1.73
358 359 6.038170 AGTTAATATTGTGGCCCCCTAATT 57.962 37.500 0.00 0.00 0.00 1.40
359 360 7.169287 AGTTAATATTGTGGCCCCCTAATTA 57.831 36.000 0.00 0.00 0.00 1.40
360 361 7.775729 AGTTAATATTGTGGCCCCCTAATTAT 58.224 34.615 0.00 0.00 0.00 1.28
361 362 8.907050 AGTTAATATTGTGGCCCCCTAATTATA 58.093 33.333 0.00 0.00 0.00 0.98
362 363 9.536510 GTTAATATTGTGGCCCCCTAATTATAA 57.463 33.333 0.00 0.00 0.00 0.98
365 366 6.933514 ATTGTGGCCCCCTAATTATAAATG 57.066 37.500 0.00 0.00 0.00 2.32
366 367 5.671463 TGTGGCCCCCTAATTATAAATGA 57.329 39.130 0.00 0.00 0.00 2.57
367 368 6.031964 TGTGGCCCCCTAATTATAAATGAA 57.968 37.500 0.00 0.00 0.00 2.57
368 369 6.444704 TGTGGCCCCCTAATTATAAATGAAA 58.555 36.000 0.00 0.00 0.00 2.69
369 370 6.903534 TGTGGCCCCCTAATTATAAATGAAAA 59.096 34.615 0.00 0.00 0.00 2.29
370 371 7.570607 TGTGGCCCCCTAATTATAAATGAAAAT 59.429 33.333 0.00 0.00 0.00 1.82
371 372 9.095700 GTGGCCCCCTAATTATAAATGAAAATA 57.904 33.333 0.00 0.00 0.00 1.40
372 373 9.320295 TGGCCCCCTAATTATAAATGAAAATAG 57.680 33.333 0.00 0.00 0.00 1.73
373 374 9.321532 GGCCCCCTAATTATAAATGAAAATAGT 57.678 33.333 0.00 0.00 0.00 2.12
381 382 9.816354 AATTATAAATGAAAATAGTTTGCCGCT 57.184 25.926 0.00 0.00 0.00 5.52
382 383 8.850454 TTATAAATGAAAATAGTTTGCCGCTC 57.150 30.769 0.00 0.00 0.00 5.03
383 384 2.892373 TGAAAATAGTTTGCCGCTCG 57.108 45.000 0.00 0.00 0.00 5.03
384 385 2.418692 TGAAAATAGTTTGCCGCTCGA 58.581 42.857 0.00 0.00 0.00 4.04
385 386 2.809119 TGAAAATAGTTTGCCGCTCGAA 59.191 40.909 0.00 0.00 0.00 3.71
386 387 3.251245 TGAAAATAGTTTGCCGCTCGAAA 59.749 39.130 0.00 0.00 0.00 3.46
387 388 2.894307 AATAGTTTGCCGCTCGAAAC 57.106 45.000 0.00 0.00 33.11 2.78
388 389 2.094762 ATAGTTTGCCGCTCGAAACT 57.905 45.000 10.97 10.97 43.28 2.66
389 390 1.425412 TAGTTTGCCGCTCGAAACTC 58.575 50.000 9.83 0.00 40.69 3.01
390 391 0.531974 AGTTTGCCGCTCGAAACTCA 60.532 50.000 2.32 0.00 37.80 3.41
391 392 0.517316 GTTTGCCGCTCGAAACTCAT 59.483 50.000 0.00 0.00 0.00 2.90
392 393 1.730064 GTTTGCCGCTCGAAACTCATA 59.270 47.619 0.00 0.00 0.00 2.15
393 394 2.309528 TTGCCGCTCGAAACTCATAT 57.690 45.000 0.00 0.00 0.00 1.78
394 395 2.309528 TGCCGCTCGAAACTCATATT 57.690 45.000 0.00 0.00 0.00 1.28
395 396 3.446310 TGCCGCTCGAAACTCATATTA 57.554 42.857 0.00 0.00 0.00 0.98
396 397 3.381045 TGCCGCTCGAAACTCATATTAG 58.619 45.455 0.00 0.00 0.00 1.73
397 398 2.731976 GCCGCTCGAAACTCATATTAGG 59.268 50.000 0.00 0.00 0.00 2.69
398 399 3.552273 GCCGCTCGAAACTCATATTAGGA 60.552 47.826 0.00 0.00 0.00 2.94
399 400 4.617959 CCGCTCGAAACTCATATTAGGAA 58.382 43.478 0.00 0.00 0.00 3.36
400 401 5.047847 CCGCTCGAAACTCATATTAGGAAA 58.952 41.667 0.00 0.00 0.00 3.13
401 402 5.522460 CCGCTCGAAACTCATATTAGGAAAA 59.478 40.000 0.00 0.00 0.00 2.29
402 403 6.292381 CCGCTCGAAACTCATATTAGGAAAAG 60.292 42.308 0.00 0.00 0.00 2.27
403 404 6.255887 CGCTCGAAACTCATATTAGGAAAAGT 59.744 38.462 0.00 0.00 0.00 2.66
404 405 7.402640 GCTCGAAACTCATATTAGGAAAAGTG 58.597 38.462 0.00 0.00 0.00 3.16
405 406 7.277981 GCTCGAAACTCATATTAGGAAAAGTGA 59.722 37.037 0.00 0.00 0.00 3.41
406 407 9.151471 CTCGAAACTCATATTAGGAAAAGTGAA 57.849 33.333 0.00 0.00 0.00 3.18
407 408 8.932791 TCGAAACTCATATTAGGAAAAGTGAAC 58.067 33.333 0.00 0.00 0.00 3.18
408 409 8.717821 CGAAACTCATATTAGGAAAAGTGAACA 58.282 33.333 0.00 0.00 0.00 3.18
411 412 9.520515 AACTCATATTAGGAAAAGTGAACATGT 57.479 29.630 0.00 0.00 0.00 3.21
412 413 8.950210 ACTCATATTAGGAAAAGTGAACATGTG 58.050 33.333 0.00 0.00 0.00 3.21
413 414 8.862325 TCATATTAGGAAAAGTGAACATGTGT 57.138 30.769 0.00 0.00 0.00 3.72
414 415 8.729756 TCATATTAGGAAAAGTGAACATGTGTG 58.270 33.333 0.00 0.00 0.00 3.82
415 416 8.729756 CATATTAGGAAAAGTGAACATGTGTGA 58.270 33.333 0.00 0.00 0.00 3.58
416 417 7.581213 ATTAGGAAAAGTGAACATGTGTGAA 57.419 32.000 0.00 0.00 0.00 3.18
417 418 7.581213 TTAGGAAAAGTGAACATGTGTGAAT 57.419 32.000 0.00 0.00 0.00 2.57
418 419 8.684386 TTAGGAAAAGTGAACATGTGTGAATA 57.316 30.769 0.00 0.00 0.00 1.75
419 420 7.206981 AGGAAAAGTGAACATGTGTGAATAG 57.793 36.000 0.00 0.00 0.00 1.73
420 421 6.998074 AGGAAAAGTGAACATGTGTGAATAGA 59.002 34.615 0.00 0.00 0.00 1.98
421 422 7.502226 AGGAAAAGTGAACATGTGTGAATAGAA 59.498 33.333 0.00 0.00 0.00 2.10
422 423 8.134895 GGAAAAGTGAACATGTGTGAATAGAAA 58.865 33.333 0.00 0.00 0.00 2.52
423 424 9.173939 GAAAAGTGAACATGTGTGAATAGAAAG 57.826 33.333 0.00 0.00 0.00 2.62
424 425 8.450578 AAAGTGAACATGTGTGAATAGAAAGA 57.549 30.769 0.00 0.00 0.00 2.52
425 426 8.450578 AAGTGAACATGTGTGAATAGAAAGAA 57.549 30.769 0.00 0.00 0.00 2.52
426 427 7.865707 AGTGAACATGTGTGAATAGAAAGAAC 58.134 34.615 0.00 0.00 0.00 3.01
427 428 7.498900 AGTGAACATGTGTGAATAGAAAGAACA 59.501 33.333 0.00 0.00 0.00 3.18
428 429 8.128582 GTGAACATGTGTGAATAGAAAGAACAA 58.871 33.333 0.00 0.00 0.00 2.83
429 430 8.681806 TGAACATGTGTGAATAGAAAGAACAAA 58.318 29.630 0.00 0.00 0.00 2.83
430 431 9.515020 GAACATGTGTGAATAGAAAGAACAAAA 57.485 29.630 0.00 0.00 0.00 2.44
431 432 9.868277 AACATGTGTGAATAGAAAGAACAAAAA 57.132 25.926 0.00 0.00 0.00 1.94
447 448 8.601845 AGAACAAAAATAATTACAAAGCACCC 57.398 30.769 0.00 0.00 0.00 4.61
448 449 8.207545 AGAACAAAAATAATTACAAAGCACCCA 58.792 29.630 0.00 0.00 0.00 4.51
449 450 8.916628 AACAAAAATAATTACAAAGCACCCAT 57.083 26.923 0.00 0.00 0.00 4.00
455 456 7.765695 ATAATTACAAAGCACCCATATGAGG 57.234 36.000 3.65 6.49 0.00 3.86
463 464 3.264477 CCCATATGAGGGGTCTGGT 57.736 57.895 3.65 0.00 45.60 4.00
464 465 1.522900 CCCATATGAGGGGTCTGGTT 58.477 55.000 3.65 0.00 45.60 3.67
465 466 1.852965 CCCATATGAGGGGTCTGGTTT 59.147 52.381 3.65 0.00 45.60 3.27
466 467 2.244769 CCCATATGAGGGGTCTGGTTTT 59.755 50.000 3.65 0.00 45.60 2.43
467 468 3.461831 CCCATATGAGGGGTCTGGTTTTA 59.538 47.826 3.65 0.00 45.60 1.52
468 469 4.079443 CCCATATGAGGGGTCTGGTTTTAA 60.079 45.833 3.65 0.00 45.60 1.52
469 470 5.515106 CCATATGAGGGGTCTGGTTTTAAA 58.485 41.667 3.65 0.00 0.00 1.52
470 471 5.955355 CCATATGAGGGGTCTGGTTTTAAAA 59.045 40.000 3.65 0.00 0.00 1.52
471 472 6.439058 CCATATGAGGGGTCTGGTTTTAAAAA 59.561 38.462 3.65 0.00 0.00 1.94
472 473 7.125659 CCATATGAGGGGTCTGGTTTTAAAAAT 59.874 37.037 3.65 0.00 0.00 1.82
473 474 9.196139 CATATGAGGGGTCTGGTTTTAAAAATA 57.804 33.333 1.31 0.00 0.00 1.40
474 475 9.951866 ATATGAGGGGTCTGGTTTTAAAAATAT 57.048 29.630 1.31 0.00 0.00 1.28
475 476 7.712204 TGAGGGGTCTGGTTTTAAAAATATC 57.288 36.000 1.31 0.00 0.00 1.63
476 477 6.376018 TGAGGGGTCTGGTTTTAAAAATATCG 59.624 38.462 1.31 0.00 0.00 2.92
477 478 6.250711 AGGGGTCTGGTTTTAAAAATATCGT 58.749 36.000 1.31 0.00 0.00 3.73
478 479 6.376299 AGGGGTCTGGTTTTAAAAATATCGTC 59.624 38.462 1.31 0.00 0.00 4.20
479 480 6.151480 GGGGTCTGGTTTTAAAAATATCGTCA 59.849 38.462 1.31 0.00 0.00 4.35
480 481 7.147966 GGGGTCTGGTTTTAAAAATATCGTCAT 60.148 37.037 1.31 0.00 0.00 3.06
481 482 8.895737 GGGTCTGGTTTTAAAAATATCGTCATA 58.104 33.333 1.31 0.00 0.00 2.15
493 494 8.746052 AAAATATCGTCATAAGGAATCCAACA 57.254 30.769 0.61 0.00 0.00 3.33
494 495 7.969536 AATATCGTCATAAGGAATCCAACAG 57.030 36.000 0.61 0.00 0.00 3.16
495 496 4.819105 TCGTCATAAGGAATCCAACAGT 57.181 40.909 0.61 0.00 0.00 3.55
496 497 4.503910 TCGTCATAAGGAATCCAACAGTG 58.496 43.478 0.61 0.00 0.00 3.66
497 498 4.221924 TCGTCATAAGGAATCCAACAGTGA 59.778 41.667 0.61 0.00 0.00 3.41
498 499 4.935205 CGTCATAAGGAATCCAACAGTGAA 59.065 41.667 0.61 0.00 0.00 3.18
499 500 5.063944 CGTCATAAGGAATCCAACAGTGAAG 59.936 44.000 0.61 0.00 0.00 3.02
500 501 6.173339 GTCATAAGGAATCCAACAGTGAAGA 58.827 40.000 0.61 0.00 0.00 2.87
501 502 6.092807 GTCATAAGGAATCCAACAGTGAAGAC 59.907 42.308 0.61 0.00 0.00 3.01
502 503 3.045601 AGGAATCCAACAGTGAAGACG 57.954 47.619 0.61 0.00 0.00 4.18
503 504 2.076863 GGAATCCAACAGTGAAGACGG 58.923 52.381 0.00 0.00 0.00 4.79
504 505 2.289444 GGAATCCAACAGTGAAGACGGA 60.289 50.000 0.00 0.00 0.00 4.69
505 506 3.600388 GAATCCAACAGTGAAGACGGAT 58.400 45.455 0.00 0.00 34.74 4.18
506 507 2.743636 TCCAACAGTGAAGACGGATC 57.256 50.000 0.00 0.00 0.00 3.36
507 508 2.248248 TCCAACAGTGAAGACGGATCT 58.752 47.619 0.00 0.00 36.42 2.75
508 509 2.029020 TCCAACAGTGAAGACGGATCTG 60.029 50.000 0.00 0.00 34.48 2.90
509 510 2.029020 CCAACAGTGAAGACGGATCTGA 60.029 50.000 9.00 0.00 34.48 3.27
510 511 3.554960 CCAACAGTGAAGACGGATCTGAA 60.555 47.826 9.00 0.00 34.48 3.02
511 512 4.248859 CAACAGTGAAGACGGATCTGAAT 58.751 43.478 9.00 0.00 34.48 2.57
512 513 4.543590 ACAGTGAAGACGGATCTGAATT 57.456 40.909 9.00 1.98 34.48 2.17
513 514 4.499183 ACAGTGAAGACGGATCTGAATTC 58.501 43.478 9.00 11.79 34.48 2.17
514 515 3.868077 CAGTGAAGACGGATCTGAATTCC 59.132 47.826 9.00 6.29 34.48 3.01
521 522 1.954927 GGATCTGAATTCCGACCCAC 58.045 55.000 5.42 0.00 0.00 4.61
522 523 1.571919 GATCTGAATTCCGACCCACG 58.428 55.000 2.27 0.00 42.18 4.94
589 590 7.696992 ACACATAAATATGGTTTTCCGTTCT 57.303 32.000 5.48 0.00 44.36 3.01
590 591 7.535139 ACACATAAATATGGTTTTCCGTTCTG 58.465 34.615 5.48 0.00 44.36 3.02
591 592 7.392113 ACACATAAATATGGTTTTCCGTTCTGA 59.608 33.333 5.48 0.00 44.36 3.27
592 593 8.405531 CACATAAATATGGTTTTCCGTTCTGAT 58.594 33.333 5.48 0.00 44.36 2.90
593 594 8.966868 ACATAAATATGGTTTTCCGTTCTGATT 58.033 29.630 5.48 0.00 44.36 2.57
594 595 9.450807 CATAAATATGGTTTTCCGTTCTGATTC 57.549 33.333 0.00 0.00 44.36 2.52
595 596 5.734855 ATATGGTTTTCCGTTCTGATTCG 57.265 39.130 0.00 0.00 44.36 3.34
596 597 3.114668 TGGTTTTCCGTTCTGATTCGA 57.885 42.857 4.75 0.00 44.36 3.71
597 598 3.670625 TGGTTTTCCGTTCTGATTCGAT 58.329 40.909 0.00 0.00 44.36 3.59
598 599 4.069304 TGGTTTTCCGTTCTGATTCGATT 58.931 39.130 0.00 0.00 44.36 3.34
599 600 4.083537 TGGTTTTCCGTTCTGATTCGATTG 60.084 41.667 0.00 0.00 44.36 2.67
600 601 4.403453 GTTTTCCGTTCTGATTCGATTGG 58.597 43.478 0.00 0.00 0.00 3.16
601 602 3.328382 TTCCGTTCTGATTCGATTGGT 57.672 42.857 0.00 0.00 0.00 3.67
602 603 2.616960 TCCGTTCTGATTCGATTGGTG 58.383 47.619 0.00 0.00 0.00 4.17
603 604 2.028476 TCCGTTCTGATTCGATTGGTGT 60.028 45.455 0.00 0.00 0.00 4.16
604 605 3.193903 TCCGTTCTGATTCGATTGGTGTA 59.806 43.478 0.00 0.00 0.00 2.90
605 606 3.930229 CCGTTCTGATTCGATTGGTGTAA 59.070 43.478 0.00 0.00 0.00 2.41
606 607 4.032900 CCGTTCTGATTCGATTGGTGTAAG 59.967 45.833 0.00 0.00 0.00 2.34
607 608 4.625742 CGTTCTGATTCGATTGGTGTAAGT 59.374 41.667 0.00 0.00 0.00 2.24
608 609 5.803461 CGTTCTGATTCGATTGGTGTAAGTA 59.197 40.000 0.00 0.00 0.00 2.24
609 610 6.475727 CGTTCTGATTCGATTGGTGTAAGTAT 59.524 38.462 0.00 0.00 0.00 2.12
610 611 7.646526 CGTTCTGATTCGATTGGTGTAAGTATA 59.353 37.037 0.00 0.00 0.00 1.47
611 612 9.477484 GTTCTGATTCGATTGGTGTAAGTATAT 57.523 33.333 0.00 0.00 0.00 0.86
618 619 8.583810 TCGATTGGTGTAAGTATATTTAGTGC 57.416 34.615 0.00 0.00 0.00 4.40
619 620 7.380333 TCGATTGGTGTAAGTATATTTAGTGCG 59.620 37.037 0.00 0.00 0.00 5.34
620 621 7.380333 CGATTGGTGTAAGTATATTTAGTGCGA 59.620 37.037 0.00 0.00 0.00 5.10
621 622 8.951787 ATTGGTGTAAGTATATTTAGTGCGAA 57.048 30.769 0.00 0.00 0.00 4.70
622 623 7.760131 TGGTGTAAGTATATTTAGTGCGAAC 57.240 36.000 0.00 0.00 0.00 3.95
623 624 7.321908 TGGTGTAAGTATATTTAGTGCGAACA 58.678 34.615 0.00 0.00 0.00 3.18
624 625 7.818446 TGGTGTAAGTATATTTAGTGCGAACAA 59.182 33.333 0.00 0.00 0.00 2.83
625 626 8.325997 GGTGTAAGTATATTTAGTGCGAACAAG 58.674 37.037 0.00 0.00 0.00 3.16
626 627 7.844653 GTGTAAGTATATTTAGTGCGAACAAGC 59.155 37.037 0.00 0.00 37.71 4.01
627 628 6.978343 AAGTATATTTAGTGCGAACAAGCA 57.022 33.333 0.00 0.00 45.96 3.91
633 634 4.471761 TGCGAACAAGCACATGGA 57.528 50.000 0.00 0.00 42.92 3.41
634 635 2.246841 TGCGAACAAGCACATGGAG 58.753 52.632 0.00 0.00 42.92 3.86
635 636 0.534877 TGCGAACAAGCACATGGAGT 60.535 50.000 0.00 0.00 42.92 3.85
636 637 1.270571 TGCGAACAAGCACATGGAGTA 60.271 47.619 0.00 0.00 42.92 2.59
637 638 1.128692 GCGAACAAGCACATGGAGTAC 59.871 52.381 0.00 0.00 37.05 2.73
638 639 2.688507 CGAACAAGCACATGGAGTACT 58.311 47.619 0.00 0.00 0.00 2.73
639 640 3.845178 CGAACAAGCACATGGAGTACTA 58.155 45.455 0.00 0.00 0.00 1.82
640 641 3.859961 CGAACAAGCACATGGAGTACTAG 59.140 47.826 0.00 0.00 0.00 2.57
641 642 3.252974 ACAAGCACATGGAGTACTAGC 57.747 47.619 0.00 0.00 0.00 3.42
642 643 2.567169 ACAAGCACATGGAGTACTAGCA 59.433 45.455 0.00 0.00 0.00 3.49
643 644 3.198635 ACAAGCACATGGAGTACTAGCAT 59.801 43.478 0.00 0.00 0.00 3.79
644 645 4.405680 ACAAGCACATGGAGTACTAGCATA 59.594 41.667 0.00 0.00 0.00 3.14
645 646 5.104941 ACAAGCACATGGAGTACTAGCATAA 60.105 40.000 0.00 0.00 0.00 1.90
646 647 5.614324 AGCACATGGAGTACTAGCATAAA 57.386 39.130 0.00 0.00 0.00 1.40
647 648 5.989477 AGCACATGGAGTACTAGCATAAAA 58.011 37.500 0.00 0.00 0.00 1.52
648 649 6.414732 AGCACATGGAGTACTAGCATAAAAA 58.585 36.000 0.00 0.00 0.00 1.94
1638 1639 1.902508 CCTTCTCCTAAGGTGCTCACA 59.097 52.381 2.21 0.00 32.78 3.58
1683 1684 5.398012 GGTGAAGCCTAACAATAAGGGATCT 60.398 44.000 0.00 0.00 34.46 2.75
1709 1710 2.980233 GCAGGTTGCGGTGAAGCT 60.980 61.111 0.00 0.00 38.13 3.74
1719 1720 3.468770 TGCGGTGAAGCTAAGTAACAAA 58.531 40.909 0.00 0.00 38.13 2.83
1878 1879 0.599728 CTGGCATCTTCTCTAGCGGC 60.600 60.000 0.00 0.00 0.00 6.53
1881 1882 0.937231 GCATCTTCTCTAGCGGCGTC 60.937 60.000 9.37 0.13 0.00 5.19
1995 1996 5.520376 AATCTGTTTCTTGTTCTTGTGGG 57.480 39.130 0.00 0.00 0.00 4.61
2012 2013 6.829298 TCTTGTGGGTAATTAGTTTGTTGACA 59.171 34.615 0.00 0.00 0.00 3.58
2122 2124 4.515191 TCAGTGGAATTGTTGAGTGTTAGC 59.485 41.667 0.00 0.00 0.00 3.09
2133 2135 4.552166 TGAGTGTTAGCTCTGCAAAAAC 57.448 40.909 0.00 0.00 36.51 2.43
2137 2139 4.035675 AGTGTTAGCTCTGCAAAAACTGAC 59.964 41.667 0.00 0.00 0.00 3.51
2269 2271 6.414079 CATCGAACAAGTCTGATTATTTCCG 58.586 40.000 0.00 0.00 0.00 4.30
2339 2341 8.248253 TGTATAAGTCGTCAATTACATCACTGT 58.752 33.333 0.00 0.00 39.49 3.55
2369 2371 9.143631 AGAATTTTGAAGTTAGTAAATGCATGC 57.856 29.630 11.82 11.82 0.00 4.06
2419 2421 7.670344 GCTGTAATTGCACAGTTGTGTTGGA 62.670 44.000 13.29 0.00 46.31 3.53
2453 2455 7.222224 GCCATTTCAATCTCAGATTGTGAAATC 59.778 37.037 23.95 10.92 43.54 2.17
2486 2488 4.016444 TGATAAATGGAGCTTTGGGTGAC 58.984 43.478 0.00 0.00 0.00 3.67
2496 2498 5.070580 GGAGCTTTGGGTGACATAGTAGTAT 59.929 44.000 0.00 0.00 31.62 2.12
2531 2533 7.741027 ATGATAGCTGTGATTTATGTTCCTG 57.259 36.000 0.00 0.00 0.00 3.86
2547 2549 2.031120 TCCTGCTGTTTTTGTTCTGGG 58.969 47.619 0.00 0.00 0.00 4.45
2570 2722 0.250684 TCAAGCTTGTCGGCCAATCA 60.251 50.000 25.19 0.00 31.20 2.57
2650 2803 5.703978 TTCCGTCATGTGAATTTCAATGT 57.296 34.783 0.00 0.00 0.00 2.71
2764 2917 6.938507 AGGAATTGAGCAAGCATCATTTAAA 58.061 32.000 0.00 0.00 0.00 1.52
2801 2954 5.791336 TGGACATGATACATACTGACTCC 57.209 43.478 0.00 0.00 0.00 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 0.031314 TCGAGCAAGATCTGGCGATC 59.969 55.000 16.53 8.72 45.18 3.69
5 6 0.461548 TTCGAGCAAGATCTGGCGAT 59.538 50.000 16.53 0.00 34.54 4.58
6 7 0.461548 ATTCGAGCAAGATCTGGCGA 59.538 50.000 16.53 10.36 34.54 5.54
7 8 1.293924 AATTCGAGCAAGATCTGGCG 58.706 50.000 16.53 8.24 34.54 5.69
8 9 2.421424 ACAAATTCGAGCAAGATCTGGC 59.579 45.455 14.77 14.77 0.00 4.85
9 10 4.270178 GACAAATTCGAGCAAGATCTGG 57.730 45.455 0.00 0.00 0.00 3.86
22 23 3.492756 GCTGATCTCTAGCCGACAAATTC 59.507 47.826 0.00 0.00 35.15 2.17
23 24 3.462021 GCTGATCTCTAGCCGACAAATT 58.538 45.455 0.00 0.00 35.15 1.82
24 25 2.544694 CGCTGATCTCTAGCCGACAAAT 60.545 50.000 0.00 0.00 37.90 2.32
25 26 1.202302 CGCTGATCTCTAGCCGACAAA 60.202 52.381 0.00 0.00 37.90 2.83
26 27 0.382158 CGCTGATCTCTAGCCGACAA 59.618 55.000 0.00 0.00 37.90 3.18
27 28 1.448119 CCGCTGATCTCTAGCCGACA 61.448 60.000 0.00 0.00 37.90 4.35
28 29 1.284408 CCGCTGATCTCTAGCCGAC 59.716 63.158 0.00 0.00 37.90 4.79
29 30 1.899054 CCCGCTGATCTCTAGCCGA 60.899 63.158 0.00 0.00 37.90 5.54
30 31 2.647875 CCCGCTGATCTCTAGCCG 59.352 66.667 0.00 0.00 37.90 5.52
31 32 3.055580 CCCCGCTGATCTCTAGCC 58.944 66.667 0.00 0.00 37.90 3.93
32 33 2.206536 AGCCCCGCTGATCTCTAGC 61.207 63.158 0.00 0.00 37.57 3.42
33 34 4.189539 AGCCCCGCTGATCTCTAG 57.810 61.111 0.00 0.00 37.57 2.43
52 53 3.124921 GTCATCGCCAACACCCCG 61.125 66.667 0.00 0.00 0.00 5.73
53 54 3.124921 CGTCATCGCCAACACCCC 61.125 66.667 0.00 0.00 0.00 4.95
54 55 2.358247 ACGTCATCGCCAACACCC 60.358 61.111 0.00 0.00 41.18 4.61
55 56 2.860293 CACGTCATCGCCAACACC 59.140 61.111 0.00 0.00 41.18 4.16
56 57 2.173382 GCACGTCATCGCCAACAC 59.827 61.111 0.00 0.00 41.18 3.32
57 58 3.410516 CGCACGTCATCGCCAACA 61.411 61.111 0.00 0.00 41.18 3.33
58 59 4.147322 CCGCACGTCATCGCCAAC 62.147 66.667 0.00 0.00 41.18 3.77
59 60 4.673298 ACCGCACGTCATCGCCAA 62.673 61.111 0.00 0.00 41.18 4.52
63 64 3.179265 GACCACCGCACGTCATCG 61.179 66.667 0.00 0.00 43.34 3.84
64 65 3.179265 CGACCACCGCACGTCATC 61.179 66.667 0.00 0.00 0.00 2.92
65 66 4.735132 CCGACCACCGCACGTCAT 62.735 66.667 0.00 0.00 36.84 3.06
67 68 3.958822 CTACCGACCACCGCACGTC 62.959 68.421 0.00 0.00 36.84 4.34
68 69 4.047059 CTACCGACCACCGCACGT 62.047 66.667 0.00 0.00 36.84 4.49
69 70 3.678717 CTCTACCGACCACCGCACG 62.679 68.421 0.00 0.00 36.84 5.34
70 71 2.181021 CTCTACCGACCACCGCAC 59.819 66.667 0.00 0.00 36.84 5.34
71 72 3.066190 CCTCTACCGACCACCGCA 61.066 66.667 0.00 0.00 36.84 5.69
72 73 4.509737 GCCTCTACCGACCACCGC 62.510 72.222 0.00 0.00 36.84 5.68
73 74 1.956629 ATTGCCTCTACCGACCACCG 61.957 60.000 0.00 0.00 38.18 4.94
74 75 0.462047 CATTGCCTCTACCGACCACC 60.462 60.000 0.00 0.00 0.00 4.61
75 76 0.249398 ACATTGCCTCTACCGACCAC 59.751 55.000 0.00 0.00 0.00 4.16
76 77 0.535335 GACATTGCCTCTACCGACCA 59.465 55.000 0.00 0.00 0.00 4.02
77 78 0.535335 TGACATTGCCTCTACCGACC 59.465 55.000 0.00 0.00 0.00 4.79
78 79 2.159099 TGATGACATTGCCTCTACCGAC 60.159 50.000 0.00 0.00 0.00 4.79
79 80 2.101415 CTGATGACATTGCCTCTACCGA 59.899 50.000 0.00 0.00 0.00 4.69
80 81 2.477825 CTGATGACATTGCCTCTACCG 58.522 52.381 0.00 0.00 0.00 4.02
81 82 2.216898 GCTGATGACATTGCCTCTACC 58.783 52.381 0.00 0.00 0.00 3.18
82 83 2.611292 GTGCTGATGACATTGCCTCTAC 59.389 50.000 10.51 1.37 0.00 2.59
83 84 2.420547 GGTGCTGATGACATTGCCTCTA 60.421 50.000 10.51 0.00 0.00 2.43
84 85 1.681166 GGTGCTGATGACATTGCCTCT 60.681 52.381 10.51 0.00 0.00 3.69
85 86 0.737219 GGTGCTGATGACATTGCCTC 59.263 55.000 10.51 5.54 0.00 4.70
86 87 0.038599 TGGTGCTGATGACATTGCCT 59.961 50.000 10.51 0.00 0.00 4.75
87 88 0.454600 CTGGTGCTGATGACATTGCC 59.545 55.000 10.51 4.21 0.00 4.52
88 89 1.400846 CTCTGGTGCTGATGACATTGC 59.599 52.381 7.24 7.24 0.00 3.56
89 90 2.418976 CACTCTGGTGCTGATGACATTG 59.581 50.000 0.00 0.00 36.61 2.82
90 91 2.617276 CCACTCTGGTGCTGATGACATT 60.617 50.000 0.00 0.00 41.75 2.71
91 92 1.065636 CCACTCTGGTGCTGATGACAT 60.066 52.381 0.00 0.00 41.75 3.06
92 93 0.322648 CCACTCTGGTGCTGATGACA 59.677 55.000 0.00 0.00 41.75 3.58
93 94 0.610174 TCCACTCTGGTGCTGATGAC 59.390 55.000 0.00 0.00 41.75 3.06
94 95 1.208776 CATCCACTCTGGTGCTGATGA 59.791 52.381 8.58 0.00 40.89 2.92
95 96 1.065636 ACATCCACTCTGGTGCTGATG 60.066 52.381 11.14 11.14 42.44 3.07
96 97 1.065636 CACATCCACTCTGGTGCTGAT 60.066 52.381 0.00 0.00 41.75 2.90
97 98 0.322648 CACATCCACTCTGGTGCTGA 59.677 55.000 0.00 0.00 41.75 4.26
98 99 0.675837 CCACATCCACTCTGGTGCTG 60.676 60.000 0.00 0.00 41.75 4.41
99 100 1.681666 CCACATCCACTCTGGTGCT 59.318 57.895 0.00 0.00 41.75 4.40
100 101 2.042831 GCCACATCCACTCTGGTGC 61.043 63.158 0.00 0.00 41.75 5.01
101 102 0.675837 CAGCCACATCCACTCTGGTG 60.676 60.000 0.00 0.00 39.03 4.17
102 103 0.837691 TCAGCCACATCCACTCTGGT 60.838 55.000 0.00 0.00 39.03 4.00
103 104 0.107800 CTCAGCCACATCCACTCTGG 60.108 60.000 0.00 0.00 39.43 3.86
104 105 0.900421 TCTCAGCCACATCCACTCTG 59.100 55.000 0.00 0.00 0.00 3.35
105 106 1.193323 CTCTCAGCCACATCCACTCT 58.807 55.000 0.00 0.00 0.00 3.24
106 107 0.177604 CCTCTCAGCCACATCCACTC 59.822 60.000 0.00 0.00 0.00 3.51
107 108 1.270414 CCCTCTCAGCCACATCCACT 61.270 60.000 0.00 0.00 0.00 4.00
108 109 1.222936 CCCTCTCAGCCACATCCAC 59.777 63.158 0.00 0.00 0.00 4.02
109 110 1.997311 CCCCTCTCAGCCACATCCA 60.997 63.158 0.00 0.00 0.00 3.41
110 111 2.914289 CCCCTCTCAGCCACATCC 59.086 66.667 0.00 0.00 0.00 3.51
111 112 2.191641 GCCCCTCTCAGCCACATC 59.808 66.667 0.00 0.00 0.00 3.06
112 113 3.790437 CGCCCCTCTCAGCCACAT 61.790 66.667 0.00 0.00 0.00 3.21
129 130 4.115199 ATCCTTGCCCACCGCTCC 62.115 66.667 0.00 0.00 38.78 4.70
130 131 2.819984 TTCATCCTTGCCCACCGCTC 62.820 60.000 0.00 0.00 38.78 5.03
131 132 2.826777 CTTCATCCTTGCCCACCGCT 62.827 60.000 0.00 0.00 38.78 5.52
132 133 2.361104 TTCATCCTTGCCCACCGC 60.361 61.111 0.00 0.00 38.31 5.68
133 134 0.322456 TTCTTCATCCTTGCCCACCG 60.322 55.000 0.00 0.00 0.00 4.94
134 135 1.004745 TCTTCTTCATCCTTGCCCACC 59.995 52.381 0.00 0.00 0.00 4.61
135 136 2.496899 TCTTCTTCATCCTTGCCCAC 57.503 50.000 0.00 0.00 0.00 4.61
136 137 3.524095 TTTCTTCTTCATCCTTGCCCA 57.476 42.857 0.00 0.00 0.00 5.36
137 138 4.871933 TTTTTCTTCTTCATCCTTGCCC 57.128 40.909 0.00 0.00 0.00 5.36
156 157 6.959639 ATGGCCACGATGAGTATAATTTTT 57.040 33.333 8.16 0.00 0.00 1.94
157 158 7.450074 TCTATGGCCACGATGAGTATAATTTT 58.550 34.615 8.16 0.00 0.00 1.82
158 159 7.004555 TCTATGGCCACGATGAGTATAATTT 57.995 36.000 8.16 0.00 0.00 1.82
159 160 6.351371 CCTCTATGGCCACGATGAGTATAATT 60.351 42.308 8.16 0.00 0.00 1.40
160 161 5.127845 CCTCTATGGCCACGATGAGTATAAT 59.872 44.000 8.16 0.00 0.00 1.28
161 162 4.462834 CCTCTATGGCCACGATGAGTATAA 59.537 45.833 8.16 0.00 0.00 0.98
162 163 4.017126 CCTCTATGGCCACGATGAGTATA 58.983 47.826 8.16 0.00 0.00 1.47
163 164 2.828520 CCTCTATGGCCACGATGAGTAT 59.171 50.000 8.16 0.00 0.00 2.12
164 165 2.158519 TCCTCTATGGCCACGATGAGTA 60.159 50.000 8.16 0.00 35.26 2.59
165 166 1.043816 CCTCTATGGCCACGATGAGT 58.956 55.000 8.16 0.00 0.00 3.41
166 167 1.271934 CTCCTCTATGGCCACGATGAG 59.728 57.143 8.16 15.41 35.26 2.90
167 168 1.332195 CTCCTCTATGGCCACGATGA 58.668 55.000 8.16 9.57 35.26 2.92
168 169 1.043816 ACTCCTCTATGGCCACGATG 58.956 55.000 8.16 5.12 35.26 3.84
169 170 2.677542 TACTCCTCTATGGCCACGAT 57.322 50.000 8.16 0.00 35.26 3.73
170 171 2.447408 TTACTCCTCTATGGCCACGA 57.553 50.000 8.16 7.04 35.26 4.35
171 172 3.753294 ATTTACTCCTCTATGGCCACG 57.247 47.619 8.16 1.55 35.26 4.94
172 173 7.038231 ACCTTATATTTACTCCTCTATGGCCAC 60.038 40.741 8.16 0.00 35.26 5.01
173 174 7.023120 ACCTTATATTTACTCCTCTATGGCCA 58.977 38.462 8.56 8.56 35.26 5.36
174 175 7.331791 CACCTTATATTTACTCCTCTATGGCC 58.668 42.308 0.00 0.00 35.26 5.36
175 176 6.819146 GCACCTTATATTTACTCCTCTATGGC 59.181 42.308 0.00 0.00 35.26 4.40
176 177 7.331791 GGCACCTTATATTTACTCCTCTATGG 58.668 42.308 0.00 0.00 37.10 2.74
177 178 7.036220 CGGCACCTTATATTTACTCCTCTATG 58.964 42.308 0.00 0.00 0.00 2.23
178 179 6.952358 TCGGCACCTTATATTTACTCCTCTAT 59.048 38.462 0.00 0.00 0.00 1.98
179 180 6.309357 TCGGCACCTTATATTTACTCCTCTA 58.691 40.000 0.00 0.00 0.00 2.43
180 181 5.145564 TCGGCACCTTATATTTACTCCTCT 58.854 41.667 0.00 0.00 0.00 3.69
181 182 5.464030 TCGGCACCTTATATTTACTCCTC 57.536 43.478 0.00 0.00 0.00 3.71
182 183 5.881923 TTCGGCACCTTATATTTACTCCT 57.118 39.130 0.00 0.00 0.00 3.69
183 184 5.411669 CCATTCGGCACCTTATATTTACTCC 59.588 44.000 0.00 0.00 0.00 3.85
184 185 5.995897 ACCATTCGGCACCTTATATTTACTC 59.004 40.000 0.00 0.00 34.57 2.59
185 186 5.937111 ACCATTCGGCACCTTATATTTACT 58.063 37.500 0.00 0.00 34.57 2.24
186 187 6.628919 AACCATTCGGCACCTTATATTTAC 57.371 37.500 0.00 0.00 34.57 2.01
187 188 6.829298 TCAAACCATTCGGCACCTTATATTTA 59.171 34.615 0.00 0.00 34.57 1.40
188 189 5.654650 TCAAACCATTCGGCACCTTATATTT 59.345 36.000 0.00 0.00 34.57 1.40
189 190 5.197451 TCAAACCATTCGGCACCTTATATT 58.803 37.500 0.00 0.00 34.57 1.28
190 191 4.787551 TCAAACCATTCGGCACCTTATAT 58.212 39.130 0.00 0.00 34.57 0.86
191 192 4.196193 CTCAAACCATTCGGCACCTTATA 58.804 43.478 0.00 0.00 34.57 0.98
192 193 3.016736 CTCAAACCATTCGGCACCTTAT 58.983 45.455 0.00 0.00 34.57 1.73
193 194 2.432444 CTCAAACCATTCGGCACCTTA 58.568 47.619 0.00 0.00 34.57 2.69
194 195 1.247567 CTCAAACCATTCGGCACCTT 58.752 50.000 0.00 0.00 34.57 3.50
195 196 0.609131 CCTCAAACCATTCGGCACCT 60.609 55.000 0.00 0.00 34.57 4.00
196 197 0.608035 TCCTCAAACCATTCGGCACC 60.608 55.000 0.00 0.00 34.57 5.01
197 198 0.804989 CTCCTCAAACCATTCGGCAC 59.195 55.000 0.00 0.00 34.57 5.01
198 199 0.400213 ACTCCTCAAACCATTCGGCA 59.600 50.000 0.00 0.00 34.57 5.69
199 200 2.396590 TACTCCTCAAACCATTCGGC 57.603 50.000 0.00 0.00 34.57 5.54
200 201 5.897377 AATTTACTCCTCAAACCATTCGG 57.103 39.130 0.00 0.00 38.77 4.30
201 202 9.855021 ATAAAAATTTACTCCTCAAACCATTCG 57.145 29.630 0.00 0.00 0.00 3.34
204 205 8.758829 GGGATAAAAATTTACTCCTCAAACCAT 58.241 33.333 11.33 0.00 0.00 3.55
205 206 7.953493 AGGGATAAAAATTTACTCCTCAAACCA 59.047 33.333 11.33 0.00 0.00 3.67
206 207 8.362464 AGGGATAAAAATTTACTCCTCAAACC 57.638 34.615 11.33 0.00 0.00 3.27
230 231 9.654663 CTAATCGACCCCTTATATCCTTTAAAG 57.345 37.037 8.32 8.32 0.00 1.85
231 232 8.599792 CCTAATCGACCCCTTATATCCTTTAAA 58.400 37.037 0.00 0.00 0.00 1.52
232 233 7.957448 TCCTAATCGACCCCTTATATCCTTTAA 59.043 37.037 0.00 0.00 0.00 1.52
233 234 7.481297 TCCTAATCGACCCCTTATATCCTTTA 58.519 38.462 0.00 0.00 0.00 1.85
234 235 6.328592 TCCTAATCGACCCCTTATATCCTTT 58.671 40.000 0.00 0.00 0.00 3.11
235 236 5.912103 TCCTAATCGACCCCTTATATCCTT 58.088 41.667 0.00 0.00 0.00 3.36
236 237 5.547631 TCCTAATCGACCCCTTATATCCT 57.452 43.478 0.00 0.00 0.00 3.24
237 238 5.393896 CGTTCCTAATCGACCCCTTATATCC 60.394 48.000 0.00 0.00 0.00 2.59
238 239 5.416952 TCGTTCCTAATCGACCCCTTATATC 59.583 44.000 0.00 0.00 0.00 1.63
239 240 5.327732 TCGTTCCTAATCGACCCCTTATAT 58.672 41.667 0.00 0.00 0.00 0.86
240 241 4.728772 TCGTTCCTAATCGACCCCTTATA 58.271 43.478 0.00 0.00 0.00 0.98
241 242 3.569491 TCGTTCCTAATCGACCCCTTAT 58.431 45.455 0.00 0.00 0.00 1.73
242 243 3.017048 TCGTTCCTAATCGACCCCTTA 57.983 47.619 0.00 0.00 0.00 2.69
243 244 1.856629 TCGTTCCTAATCGACCCCTT 58.143 50.000 0.00 0.00 0.00 3.95
244 245 2.083628 ATCGTTCCTAATCGACCCCT 57.916 50.000 0.00 0.00 38.85 4.79
245 246 2.904697 AATCGTTCCTAATCGACCCC 57.095 50.000 0.00 0.00 38.85 4.95
246 247 6.856135 AATTAAATCGTTCCTAATCGACCC 57.144 37.500 0.00 0.00 38.85 4.46
271 272 1.202114 CCCGCTAGATGCTTGCAAAAA 59.798 47.619 0.00 0.00 40.11 1.94
272 273 0.810648 CCCGCTAGATGCTTGCAAAA 59.189 50.000 0.00 0.00 40.11 2.44
273 274 0.322456 ACCCGCTAGATGCTTGCAAA 60.322 50.000 0.00 0.00 40.11 3.68
274 275 1.026182 CACCCGCTAGATGCTTGCAA 61.026 55.000 0.00 0.00 40.11 4.08
275 276 1.450134 CACCCGCTAGATGCTTGCA 60.450 57.895 0.00 0.00 40.11 4.08
276 277 2.828128 GCACCCGCTAGATGCTTGC 61.828 63.158 0.00 0.00 40.11 4.01
277 278 2.182842 GGCACCCGCTAGATGCTTG 61.183 63.158 0.00 0.00 39.38 4.01
278 279 2.190578 GGCACCCGCTAGATGCTT 59.809 61.111 0.00 0.00 39.38 3.91
305 306 0.596341 GCCACTCTAGAAGCGCTAGC 60.596 60.000 12.05 4.06 45.14 3.42
306 307 0.031449 GGCCACTCTAGAAGCGCTAG 59.969 60.000 12.05 6.44 46.57 3.42
307 308 1.725557 CGGCCACTCTAGAAGCGCTA 61.726 60.000 12.05 0.00 0.00 4.26
308 309 2.896443 GGCCACTCTAGAAGCGCT 59.104 61.111 2.64 2.64 0.00 5.92
309 310 2.356818 ATCGGCCACTCTAGAAGCGC 62.357 60.000 2.24 0.00 0.00 5.92
310 311 0.318275 GATCGGCCACTCTAGAAGCG 60.318 60.000 2.24 0.00 0.00 4.68
311 312 0.032815 GGATCGGCCACTCTAGAAGC 59.967 60.000 2.24 0.00 36.34 3.86
312 313 1.403814 TGGATCGGCCACTCTAGAAG 58.596 55.000 2.24 0.00 43.33 2.85
313 314 3.607871 TGGATCGGCCACTCTAGAA 57.392 52.632 2.24 0.00 43.33 2.10
322 323 6.475402 CACAATATTAACTTTTTGGATCGGCC 59.525 38.462 0.00 0.00 37.10 6.13
323 324 6.475402 CCACAATATTAACTTTTTGGATCGGC 59.525 38.462 0.00 0.00 0.00 5.54
324 325 6.475402 GCCACAATATTAACTTTTTGGATCGG 59.525 38.462 8.05 0.00 0.00 4.18
325 326 6.475402 GGCCACAATATTAACTTTTTGGATCG 59.525 38.462 0.00 0.00 0.00 3.69
326 327 6.761242 GGGCCACAATATTAACTTTTTGGATC 59.239 38.462 4.39 0.00 0.00 3.36
327 328 6.352651 GGGGCCACAATATTAACTTTTTGGAT 60.353 38.462 4.39 0.00 0.00 3.41
328 329 5.046231 GGGGCCACAATATTAACTTTTTGGA 60.046 40.000 4.39 0.00 0.00 3.53
329 330 5.182487 GGGGCCACAATATTAACTTTTTGG 58.818 41.667 4.39 1.69 0.00 3.28
330 331 5.045942 AGGGGGCCACAATATTAACTTTTTG 60.046 40.000 9.35 0.00 0.00 2.44
331 332 5.097948 AGGGGGCCACAATATTAACTTTTT 58.902 37.500 9.35 0.00 0.00 1.94
332 333 4.694512 AGGGGGCCACAATATTAACTTTT 58.305 39.130 9.35 0.00 0.00 2.27
333 334 4.346478 AGGGGGCCACAATATTAACTTT 57.654 40.909 9.35 0.00 0.00 2.66
334 335 5.475398 TTAGGGGGCCACAATATTAACTT 57.525 39.130 9.35 0.00 0.00 2.66
335 336 5.679817 ATTAGGGGGCCACAATATTAACT 57.320 39.130 9.35 0.00 0.00 2.24
336 337 9.536510 TTATAATTAGGGGGCCACAATATTAAC 57.463 33.333 9.35 0.00 0.00 2.01
339 340 9.045745 CATTTATAATTAGGGGGCCACAATATT 57.954 33.333 9.35 6.92 0.00 1.28
340 341 8.405850 TCATTTATAATTAGGGGGCCACAATAT 58.594 33.333 9.35 3.17 0.00 1.28
341 342 7.770662 TCATTTATAATTAGGGGGCCACAATA 58.229 34.615 9.35 0.00 0.00 1.90
342 343 6.629156 TCATTTATAATTAGGGGGCCACAAT 58.371 36.000 9.35 2.74 0.00 2.71
343 344 6.031964 TCATTTATAATTAGGGGGCCACAA 57.968 37.500 9.35 0.00 0.00 3.33
344 345 5.671463 TCATTTATAATTAGGGGGCCACA 57.329 39.130 9.35 0.00 0.00 4.17
345 346 6.987403 TTTCATTTATAATTAGGGGGCCAC 57.013 37.500 4.39 0.00 0.00 5.01
346 347 9.320295 CTATTTTCATTTATAATTAGGGGGCCA 57.680 33.333 4.39 0.00 0.00 5.36
347 348 9.321532 ACTATTTTCATTTATAATTAGGGGGCC 57.678 33.333 0.00 0.00 0.00 5.80
355 356 9.816354 AGCGGCAAACTATTTTCATTTATAATT 57.184 25.926 1.45 0.00 0.00 1.40
356 357 9.463443 GAGCGGCAAACTATTTTCATTTATAAT 57.537 29.630 1.45 0.00 0.00 1.28
357 358 7.642194 CGAGCGGCAAACTATTTTCATTTATAA 59.358 33.333 1.45 0.00 0.00 0.98
358 359 7.011576 TCGAGCGGCAAACTATTTTCATTTATA 59.988 33.333 1.45 0.00 0.00 0.98
359 360 5.971202 CGAGCGGCAAACTATTTTCATTTAT 59.029 36.000 1.45 0.00 0.00 1.40
360 361 5.122554 TCGAGCGGCAAACTATTTTCATTTA 59.877 36.000 1.45 0.00 0.00 1.40
361 362 4.083003 TCGAGCGGCAAACTATTTTCATTT 60.083 37.500 1.45 0.00 0.00 2.32
362 363 3.438781 TCGAGCGGCAAACTATTTTCATT 59.561 39.130 1.45 0.00 0.00 2.57
363 364 3.006940 TCGAGCGGCAAACTATTTTCAT 58.993 40.909 1.45 0.00 0.00 2.57
364 365 2.418692 TCGAGCGGCAAACTATTTTCA 58.581 42.857 1.45 0.00 0.00 2.69
365 366 3.465122 TTCGAGCGGCAAACTATTTTC 57.535 42.857 1.45 0.00 0.00 2.29
366 367 3.252458 AGTTTCGAGCGGCAAACTATTTT 59.748 39.130 13.33 0.00 40.35 1.82
367 368 2.812011 AGTTTCGAGCGGCAAACTATTT 59.188 40.909 13.33 0.00 40.35 1.40
368 369 2.415512 GAGTTTCGAGCGGCAAACTATT 59.584 45.455 14.52 0.00 41.83 1.73
369 370 2.000447 GAGTTTCGAGCGGCAAACTAT 59.000 47.619 14.52 0.00 41.83 2.12
370 371 1.269883 TGAGTTTCGAGCGGCAAACTA 60.270 47.619 14.52 4.22 41.83 2.24
371 372 0.531974 TGAGTTTCGAGCGGCAAACT 60.532 50.000 14.47 14.47 43.94 2.66
372 373 0.517316 ATGAGTTTCGAGCGGCAAAC 59.483 50.000 1.45 4.49 33.42 2.93
373 374 2.087501 TATGAGTTTCGAGCGGCAAA 57.912 45.000 1.45 0.00 0.00 3.68
374 375 2.309528 ATATGAGTTTCGAGCGGCAA 57.690 45.000 1.45 0.00 0.00 4.52
375 376 2.309528 AATATGAGTTTCGAGCGGCA 57.690 45.000 1.45 0.00 0.00 5.69
376 377 2.731976 CCTAATATGAGTTTCGAGCGGC 59.268 50.000 0.00 0.00 0.00 6.53
377 378 4.238761 TCCTAATATGAGTTTCGAGCGG 57.761 45.455 0.00 0.00 0.00 5.52
378 379 6.255887 ACTTTTCCTAATATGAGTTTCGAGCG 59.744 38.462 0.00 0.00 0.00 5.03
379 380 7.277981 TCACTTTTCCTAATATGAGTTTCGAGC 59.722 37.037 0.00 0.00 0.00 5.03
380 381 8.703604 TCACTTTTCCTAATATGAGTTTCGAG 57.296 34.615 0.00 0.00 0.00 4.04
381 382 8.932791 GTTCACTTTTCCTAATATGAGTTTCGA 58.067 33.333 0.00 0.00 0.00 3.71
382 383 8.717821 TGTTCACTTTTCCTAATATGAGTTTCG 58.282 33.333 0.00 0.00 0.00 3.46
385 386 9.520515 ACATGTTCACTTTTCCTAATATGAGTT 57.479 29.630 0.00 0.00 0.00 3.01
386 387 8.950210 CACATGTTCACTTTTCCTAATATGAGT 58.050 33.333 0.00 0.00 0.00 3.41
387 388 8.950210 ACACATGTTCACTTTTCCTAATATGAG 58.050 33.333 0.00 0.00 0.00 2.90
388 389 8.729756 CACACATGTTCACTTTTCCTAATATGA 58.270 33.333 0.00 0.00 0.00 2.15
389 390 8.729756 TCACACATGTTCACTTTTCCTAATATG 58.270 33.333 0.00 0.00 0.00 1.78
390 391 8.862325 TCACACATGTTCACTTTTCCTAATAT 57.138 30.769 0.00 0.00 0.00 1.28
391 392 8.684386 TTCACACATGTTCACTTTTCCTAATA 57.316 30.769 0.00 0.00 0.00 0.98
392 393 7.581213 TTCACACATGTTCACTTTTCCTAAT 57.419 32.000 0.00 0.00 0.00 1.73
393 394 7.581213 ATTCACACATGTTCACTTTTCCTAA 57.419 32.000 0.00 0.00 0.00 2.69
394 395 8.154203 TCTATTCACACATGTTCACTTTTCCTA 58.846 33.333 0.00 0.00 0.00 2.94
395 396 6.998074 TCTATTCACACATGTTCACTTTTCCT 59.002 34.615 0.00 0.00 0.00 3.36
396 397 7.202016 TCTATTCACACATGTTCACTTTTCC 57.798 36.000 0.00 0.00 0.00 3.13
397 398 9.173939 CTTTCTATTCACACATGTTCACTTTTC 57.826 33.333 0.00 0.00 0.00 2.29
398 399 8.902806 TCTTTCTATTCACACATGTTCACTTTT 58.097 29.630 0.00 0.00 0.00 2.27
399 400 8.450578 TCTTTCTATTCACACATGTTCACTTT 57.549 30.769 0.00 0.00 0.00 2.66
400 401 8.345565 GTTCTTTCTATTCACACATGTTCACTT 58.654 33.333 0.00 0.00 0.00 3.16
401 402 7.498900 TGTTCTTTCTATTCACACATGTTCACT 59.501 33.333 0.00 0.00 0.00 3.41
402 403 7.639039 TGTTCTTTCTATTCACACATGTTCAC 58.361 34.615 0.00 0.00 0.00 3.18
403 404 7.800155 TGTTCTTTCTATTCACACATGTTCA 57.200 32.000 0.00 0.00 0.00 3.18
404 405 9.515020 TTTTGTTCTTTCTATTCACACATGTTC 57.485 29.630 0.00 0.00 0.00 3.18
405 406 9.868277 TTTTTGTTCTTTCTATTCACACATGTT 57.132 25.926 0.00 0.00 0.00 2.71
421 422 9.051679 GGGTGCTTTGTAATTATTTTTGTTCTT 57.948 29.630 0.00 0.00 0.00 2.52
422 423 8.207545 TGGGTGCTTTGTAATTATTTTTGTTCT 58.792 29.630 0.00 0.00 0.00 3.01
423 424 8.371770 TGGGTGCTTTGTAATTATTTTTGTTC 57.628 30.769 0.00 0.00 0.00 3.18
424 425 8.916628 ATGGGTGCTTTGTAATTATTTTTGTT 57.083 26.923 0.00 0.00 0.00 2.83
429 430 8.641541 CCTCATATGGGTGCTTTGTAATTATTT 58.358 33.333 1.00 0.00 0.00 1.40
430 431 7.233348 CCCTCATATGGGTGCTTTGTAATTATT 59.767 37.037 1.00 0.00 42.25 1.40
431 432 6.721208 CCCTCATATGGGTGCTTTGTAATTAT 59.279 38.462 1.00 0.00 42.25 1.28
432 433 6.068010 CCCTCATATGGGTGCTTTGTAATTA 58.932 40.000 1.00 0.00 42.25 1.40
433 434 4.895297 CCCTCATATGGGTGCTTTGTAATT 59.105 41.667 1.00 0.00 42.25 1.40
434 435 4.473444 CCCTCATATGGGTGCTTTGTAAT 58.527 43.478 1.00 0.00 42.25 1.89
435 436 3.372566 CCCCTCATATGGGTGCTTTGTAA 60.373 47.826 1.00 0.00 45.70 2.41
436 437 2.174639 CCCCTCATATGGGTGCTTTGTA 59.825 50.000 1.00 0.00 45.70 2.41
437 438 1.063717 CCCCTCATATGGGTGCTTTGT 60.064 52.381 1.00 0.00 45.70 2.83
438 439 1.696063 CCCCTCATATGGGTGCTTTG 58.304 55.000 1.00 0.00 45.70 2.77
446 447 3.669939 AAAACCAGACCCCTCATATGG 57.330 47.619 2.13 0.00 37.07 2.74
447 448 7.475137 TTTTTAAAACCAGACCCCTCATATG 57.525 36.000 0.00 0.00 0.00 1.78
448 449 9.951866 ATATTTTTAAAACCAGACCCCTCATAT 57.048 29.630 0.00 0.00 0.00 1.78
449 450 9.416284 GATATTTTTAAAACCAGACCCCTCATA 57.584 33.333 0.00 0.00 0.00 2.15
450 451 7.068226 CGATATTTTTAAAACCAGACCCCTCAT 59.932 37.037 0.00 0.00 0.00 2.90
451 452 6.376018 CGATATTTTTAAAACCAGACCCCTCA 59.624 38.462 0.00 0.00 0.00 3.86
452 453 6.376299 ACGATATTTTTAAAACCAGACCCCTC 59.624 38.462 0.00 0.00 0.00 4.30
453 454 6.250711 ACGATATTTTTAAAACCAGACCCCT 58.749 36.000 0.00 0.00 0.00 4.79
454 455 6.151480 TGACGATATTTTTAAAACCAGACCCC 59.849 38.462 0.00 0.00 0.00 4.95
455 456 7.148355 TGACGATATTTTTAAAACCAGACCC 57.852 36.000 0.00 0.00 0.00 4.46
467 468 9.184523 TGTTGGATTCCTTATGACGATATTTTT 57.815 29.630 3.95 0.00 0.00 1.94
468 469 8.746052 TGTTGGATTCCTTATGACGATATTTT 57.254 30.769 3.95 0.00 0.00 1.82
469 470 7.993183 ACTGTTGGATTCCTTATGACGATATTT 59.007 33.333 3.95 0.00 0.00 1.40
470 471 7.442364 CACTGTTGGATTCCTTATGACGATATT 59.558 37.037 3.95 0.00 0.00 1.28
471 472 6.931281 CACTGTTGGATTCCTTATGACGATAT 59.069 38.462 3.95 0.00 0.00 1.63
472 473 6.097696 TCACTGTTGGATTCCTTATGACGATA 59.902 38.462 3.95 0.00 0.00 2.92
473 474 5.104941 TCACTGTTGGATTCCTTATGACGAT 60.105 40.000 3.95 0.00 0.00 3.73
474 475 4.221924 TCACTGTTGGATTCCTTATGACGA 59.778 41.667 3.95 0.00 0.00 4.20
475 476 4.503910 TCACTGTTGGATTCCTTATGACG 58.496 43.478 3.95 0.00 0.00 4.35
476 477 6.092807 GTCTTCACTGTTGGATTCCTTATGAC 59.907 42.308 3.95 0.00 0.00 3.06
477 478 6.173339 GTCTTCACTGTTGGATTCCTTATGA 58.827 40.000 3.95 0.00 0.00 2.15
478 479 5.063944 CGTCTTCACTGTTGGATTCCTTATG 59.936 44.000 3.95 0.00 0.00 1.90
479 480 5.178797 CGTCTTCACTGTTGGATTCCTTAT 58.821 41.667 3.95 0.00 0.00 1.73
480 481 4.562757 CCGTCTTCACTGTTGGATTCCTTA 60.563 45.833 3.95 0.00 0.00 2.69
481 482 3.403038 CGTCTTCACTGTTGGATTCCTT 58.597 45.455 3.95 0.00 0.00 3.36
482 483 2.289694 CCGTCTTCACTGTTGGATTCCT 60.290 50.000 3.95 0.00 0.00 3.36
483 484 2.076863 CCGTCTTCACTGTTGGATTCC 58.923 52.381 0.00 0.00 0.00 3.01
484 485 3.040147 TCCGTCTTCACTGTTGGATTC 57.960 47.619 0.00 0.00 0.00 2.52
485 486 3.261897 AGATCCGTCTTCACTGTTGGATT 59.738 43.478 0.00 0.00 36.40 3.01
486 487 2.834549 AGATCCGTCTTCACTGTTGGAT 59.165 45.455 0.00 0.00 38.86 3.41
487 488 2.029020 CAGATCCGTCTTCACTGTTGGA 60.029 50.000 0.00 0.00 30.42 3.53
488 489 2.029020 TCAGATCCGTCTTCACTGTTGG 60.029 50.000 0.00 0.00 30.42 3.77
489 490 3.303881 TCAGATCCGTCTTCACTGTTG 57.696 47.619 0.00 0.00 30.42 3.33
490 491 4.543590 ATTCAGATCCGTCTTCACTGTT 57.456 40.909 0.00 0.00 30.42 3.16
491 492 4.499183 GAATTCAGATCCGTCTTCACTGT 58.501 43.478 0.00 0.00 30.42 3.55
492 493 3.868077 GGAATTCAGATCCGTCTTCACTG 59.132 47.826 7.93 0.00 30.42 3.66
493 494 4.130286 GGAATTCAGATCCGTCTTCACT 57.870 45.455 7.93 0.00 30.42 3.41
502 503 1.806623 CGTGGGTCGGAATTCAGATCC 60.807 57.143 25.86 25.86 41.01 3.36
503 504 1.571919 CGTGGGTCGGAATTCAGATC 58.428 55.000 11.54 10.79 35.71 2.75
504 505 3.760693 CGTGGGTCGGAATTCAGAT 57.239 52.632 11.54 0.00 35.71 2.90
516 517 2.420129 GCATATCTTTCAGACCGTGGGT 60.420 50.000 0.00 0.00 39.44 4.51
517 518 2.213499 GCATATCTTTCAGACCGTGGG 58.787 52.381 0.00 0.00 0.00 4.61
518 519 2.158900 AGGCATATCTTTCAGACCGTGG 60.159 50.000 0.00 0.00 0.00 4.94
519 520 3.185246 AGGCATATCTTTCAGACCGTG 57.815 47.619 0.00 0.00 0.00 4.94
520 521 3.914426 AAGGCATATCTTTCAGACCGT 57.086 42.857 0.00 0.00 0.00 4.83
521 522 5.567138 AAAAAGGCATATCTTTCAGACCG 57.433 39.130 0.00 0.00 36.09 4.79
522 523 9.875691 ATTTTAAAAAGGCATATCTTTCAGACC 57.124 29.630 4.44 0.00 36.09 3.85
563 564 9.403583 AGAACGGAAAACCATATTTATGTGTAT 57.596 29.630 0.00 0.00 31.82 2.29
564 565 8.670135 CAGAACGGAAAACCATATTTATGTGTA 58.330 33.333 0.00 0.00 31.82 2.90
565 566 7.392113 TCAGAACGGAAAACCATATTTATGTGT 59.608 33.333 0.00 0.00 31.82 3.72
566 567 7.757526 TCAGAACGGAAAACCATATTTATGTG 58.242 34.615 0.00 0.00 31.82 3.21
567 568 7.931578 TCAGAACGGAAAACCATATTTATGT 57.068 32.000 0.00 0.00 31.82 2.29
568 569 9.450807 GAATCAGAACGGAAAACCATATTTATG 57.549 33.333 0.00 0.00 0.00 1.90
569 570 8.342634 CGAATCAGAACGGAAAACCATATTTAT 58.657 33.333 0.00 0.00 0.00 1.40
570 571 7.549842 TCGAATCAGAACGGAAAACCATATTTA 59.450 33.333 0.00 0.00 0.00 1.40
571 572 6.373216 TCGAATCAGAACGGAAAACCATATTT 59.627 34.615 0.00 0.00 0.00 1.40
572 573 5.878116 TCGAATCAGAACGGAAAACCATATT 59.122 36.000 0.00 0.00 0.00 1.28
573 574 5.424757 TCGAATCAGAACGGAAAACCATAT 58.575 37.500 0.00 0.00 0.00 1.78
574 575 4.823157 TCGAATCAGAACGGAAAACCATA 58.177 39.130 0.00 0.00 0.00 2.74
575 576 3.670625 TCGAATCAGAACGGAAAACCAT 58.329 40.909 0.00 0.00 0.00 3.55
576 577 3.114668 TCGAATCAGAACGGAAAACCA 57.885 42.857 0.00 0.00 0.00 3.67
577 578 4.403453 CAATCGAATCAGAACGGAAAACC 58.597 43.478 0.00 0.00 0.00 3.27
578 579 4.083484 ACCAATCGAATCAGAACGGAAAAC 60.083 41.667 0.00 0.00 0.00 2.43
579 580 4.069304 ACCAATCGAATCAGAACGGAAAA 58.931 39.130 0.00 0.00 0.00 2.29
580 581 3.435327 CACCAATCGAATCAGAACGGAAA 59.565 43.478 0.00 0.00 0.00 3.13
581 582 3.000041 CACCAATCGAATCAGAACGGAA 59.000 45.455 0.00 0.00 0.00 4.30
582 583 2.028476 ACACCAATCGAATCAGAACGGA 60.028 45.455 0.00 0.00 0.00 4.69
583 584 2.346803 ACACCAATCGAATCAGAACGG 58.653 47.619 0.00 0.00 0.00 4.44
584 585 4.625742 ACTTACACCAATCGAATCAGAACG 59.374 41.667 0.00 0.00 0.00 3.95
585 586 7.772332 ATACTTACACCAATCGAATCAGAAC 57.228 36.000 0.00 0.00 0.00 3.01
592 593 9.037737 GCACTAAATATACTTACACCAATCGAA 57.962 33.333 0.00 0.00 0.00 3.71
593 594 7.380333 CGCACTAAATATACTTACACCAATCGA 59.620 37.037 0.00 0.00 0.00 3.59
594 595 7.380333 TCGCACTAAATATACTTACACCAATCG 59.620 37.037 0.00 0.00 0.00 3.34
595 596 8.583810 TCGCACTAAATATACTTACACCAATC 57.416 34.615 0.00 0.00 0.00 2.67
596 597 8.823818 GTTCGCACTAAATATACTTACACCAAT 58.176 33.333 0.00 0.00 0.00 3.16
597 598 7.818446 TGTTCGCACTAAATATACTTACACCAA 59.182 33.333 0.00 0.00 0.00 3.67
598 599 7.321908 TGTTCGCACTAAATATACTTACACCA 58.678 34.615 0.00 0.00 0.00 4.17
599 600 7.760131 TGTTCGCACTAAATATACTTACACC 57.240 36.000 0.00 0.00 0.00 4.16
600 601 7.844653 GCTTGTTCGCACTAAATATACTTACAC 59.155 37.037 0.00 0.00 0.00 2.90
601 602 7.546316 TGCTTGTTCGCACTAAATATACTTACA 59.454 33.333 0.00 0.00 34.44 2.41
602 603 7.902032 TGCTTGTTCGCACTAAATATACTTAC 58.098 34.615 0.00 0.00 34.44 2.34
604 605 6.978343 TGCTTGTTCGCACTAAATATACTT 57.022 33.333 0.00 0.00 34.44 2.24
616 617 0.534877 ACTCCATGTGCTTGTTCGCA 60.535 50.000 0.00 0.00 37.62 5.10
617 618 1.128692 GTACTCCATGTGCTTGTTCGC 59.871 52.381 0.00 0.00 0.00 4.70
618 619 2.688507 AGTACTCCATGTGCTTGTTCG 58.311 47.619 0.00 0.00 38.47 3.95
619 620 3.619038 GCTAGTACTCCATGTGCTTGTTC 59.381 47.826 0.00 0.00 41.73 3.18
620 621 3.007940 TGCTAGTACTCCATGTGCTTGTT 59.992 43.478 0.00 0.00 41.73 2.83
621 622 2.567169 TGCTAGTACTCCATGTGCTTGT 59.433 45.455 0.00 0.00 41.73 3.16
622 623 3.251479 TGCTAGTACTCCATGTGCTTG 57.749 47.619 0.00 0.00 41.73 4.01
623 624 5.614324 TTATGCTAGTACTCCATGTGCTT 57.386 39.130 15.53 6.78 41.73 3.91
624 625 5.614324 TTTATGCTAGTACTCCATGTGCT 57.386 39.130 15.53 0.00 43.84 4.40
625 626 6.677781 TTTTTATGCTAGTACTCCATGTGC 57.322 37.500 15.53 6.59 0.00 4.57
677 678 3.845781 TCAAAAGCTGAAGAGGAGTGT 57.154 42.857 0.00 0.00 0.00 3.55
700 701 4.081697 TGAGCACATCTTTCTAACCGATCA 60.082 41.667 0.00 0.00 0.00 2.92
795 796 0.171007 GTGGTGATTGATTGGGCGTG 59.829 55.000 0.00 0.00 0.00 5.34
952 953 3.855853 GCTCGGGGAAGAGAGGGC 61.856 72.222 0.00 0.00 40.57 5.19
1043 1044 3.764466 CCTCCAGAAGCCGCTCGT 61.764 66.667 0.00 0.00 0.00 4.18
1638 1639 2.282745 GCCTGCAGCTTCTTGGGT 60.283 61.111 8.66 0.00 38.99 4.51
1709 1710 5.107760 GCATCGTCTTCACGTTTGTTACTTA 60.108 40.000 0.00 0.00 46.76 2.24
1719 1720 1.738099 GCTGGCATCGTCTTCACGT 60.738 57.895 0.00 0.00 46.76 4.49
1995 1996 7.724305 TCCTCAGTGTCAACAAACTAATTAC 57.276 36.000 0.00 0.00 0.00 1.89
2122 2124 2.291741 GTCTGGGTCAGTTTTTGCAGAG 59.708 50.000 0.00 0.00 32.61 3.35
2133 2135 1.352083 TCCTTGAAGGTCTGGGTCAG 58.648 55.000 11.60 0.00 36.53 3.51
2137 2139 1.421646 ACACTTCCTTGAAGGTCTGGG 59.578 52.381 11.60 6.38 43.25 4.45
2339 2341 7.537306 GCATTTACTAACTTCAAAATTCTGCGA 59.463 33.333 0.00 0.00 0.00 5.10
2369 2371 3.081804 ACATCAAGAAAGCTAAACGGGG 58.918 45.455 0.00 0.00 0.00 5.73
2453 2455 7.330900 AGCTCCATTTATCATTTGAACAGAG 57.669 36.000 0.00 0.00 0.00 3.35
2531 2533 2.031870 ACCTCCCAGAACAAAAACAGC 58.968 47.619 0.00 0.00 0.00 4.40
2547 2549 2.035442 GGCCGACAAGCTTGACCTC 61.035 63.158 32.50 18.18 0.00 3.85
2582 2734 2.908688 ACCAAACAGGAATTGCCAAC 57.091 45.000 0.00 0.00 41.22 3.77
2593 2745 7.648142 TCAGCAGTAAATAAAGAACCAAACAG 58.352 34.615 0.00 0.00 0.00 3.16
2666 2819 3.181503 CGCCAGACCATTGAGAATTTGAG 60.182 47.826 0.00 0.00 0.00 3.02
2667 2820 2.749076 CGCCAGACCATTGAGAATTTGA 59.251 45.455 0.00 0.00 0.00 2.69
2668 2821 2.489329 ACGCCAGACCATTGAGAATTTG 59.511 45.455 0.00 0.00 0.00 2.32
2669 2822 2.795329 ACGCCAGACCATTGAGAATTT 58.205 42.857 0.00 0.00 0.00 1.82
2670 2823 2.489329 CAACGCCAGACCATTGAGAATT 59.511 45.455 0.00 0.00 0.00 2.17
2671 2824 2.086869 CAACGCCAGACCATTGAGAAT 58.913 47.619 0.00 0.00 0.00 2.40
2672 2825 1.071542 TCAACGCCAGACCATTGAGAA 59.928 47.619 0.00 0.00 0.00 2.87
2673 2826 0.684535 TCAACGCCAGACCATTGAGA 59.315 50.000 0.00 0.00 0.00 3.27
2714 2867 2.164219 CAGGGGCATACAACACATTGAC 59.836 50.000 0.00 0.00 39.30 3.18
2764 2917 9.277783 GTATCATGTCCATAGAACAAGCTAAAT 57.722 33.333 0.00 0.00 0.00 1.40
2801 2954 7.330700 GGCCACTTAGTAGTAGTACTATAGACG 59.669 44.444 16.46 12.42 40.69 4.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.