Multiple sequence alignment - TraesCS3B01G254100
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G254100 | chr3B | 100.000 | 3893 | 0 | 0 | 1 | 3893 | 409543693 | 409547585 | 0.000000e+00 | 7190 |
1 | TraesCS3B01G254100 | chr3B | 96.099 | 282 | 11 | 0 | 3612 | 3893 | 129123841 | 129124122 | 9.860000e-126 | 460 |
2 | TraesCS3B01G254100 | chr3B | 96.099 | 282 | 11 | 0 | 3612 | 3893 | 226156001 | 226155720 | 9.860000e-126 | 460 |
3 | TraesCS3B01G254100 | chr3D | 96.269 | 3404 | 93 | 13 | 1 | 3379 | 311669178 | 311665784 | 0.000000e+00 | 5552 |
4 | TraesCS3B01G254100 | chr3D | 90.230 | 174 | 6 | 1 | 3403 | 3576 | 311664719 | 311664557 | 2.360000e-52 | 217 |
5 | TraesCS3B01G254100 | chr3D | 87.970 | 133 | 11 | 1 | 242 | 369 | 172356570 | 172356702 | 6.740000e-33 | 152 |
6 | TraesCS3B01G254100 | chr3A | 95.893 | 3409 | 96 | 18 | 1 | 3376 | 420739122 | 420742519 | 0.000000e+00 | 5480 |
7 | TraesCS3B01G254100 | chr3A | 94.253 | 174 | 10 | 0 | 3403 | 3576 | 420743267 | 420743440 | 2.310000e-67 | 267 |
8 | TraesCS3B01G254100 | chr3A | 91.270 | 126 | 6 | 2 | 249 | 369 | 169855801 | 169855926 | 2.410000e-37 | 167 |
9 | TraesCS3B01G254100 | chr6B | 96.454 | 282 | 10 | 0 | 3612 | 3893 | 56478991 | 56478710 | 2.120000e-127 | 466 |
10 | TraesCS3B01G254100 | chr6B | 96.113 | 283 | 9 | 2 | 3612 | 3893 | 515520506 | 515520787 | 9.860000e-126 | 460 |
11 | TraesCS3B01G254100 | chr7B | 96.099 | 282 | 11 | 0 | 3612 | 3893 | 145142338 | 145142057 | 9.860000e-126 | 460 |
12 | TraesCS3B01G254100 | chr7B | 96.099 | 282 | 11 | 0 | 3612 | 3893 | 413500051 | 413499770 | 9.860000e-126 | 460 |
13 | TraesCS3B01G254100 | chr5D | 96.099 | 282 | 11 | 0 | 3612 | 3893 | 236191853 | 236192134 | 9.860000e-126 | 460 |
14 | TraesCS3B01G254100 | chr5D | 88.550 | 131 | 10 | 1 | 251 | 376 | 412263451 | 412263321 | 1.870000e-33 | 154 |
15 | TraesCS3B01G254100 | chr2B | 96.099 | 282 | 11 | 0 | 3612 | 3893 | 486084061 | 486083780 | 9.860000e-126 | 460 |
16 | TraesCS3B01G254100 | chr2B | 88.148 | 135 | 10 | 2 | 250 | 379 | 572791182 | 572791049 | 5.210000e-34 | 156 |
17 | TraesCS3B01G254100 | chr5B | 96.099 | 282 | 10 | 1 | 3612 | 3893 | 475814759 | 475814479 | 3.540000e-125 | 459 |
18 | TraesCS3B01G254100 | chr7A | 91.200 | 125 | 6 | 1 | 250 | 369 | 498590258 | 498590382 | 8.650000e-37 | 165 |
19 | TraesCS3B01G254100 | chr7A | 86.364 | 154 | 11 | 6 | 231 | 376 | 627236795 | 627236946 | 4.030000e-35 | 159 |
20 | TraesCS3B01G254100 | chr6A | 90.400 | 125 | 7 | 1 | 250 | 369 | 352665670 | 352665794 | 4.030000e-35 | 159 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS3B01G254100 | chr3B | 409543693 | 409547585 | 3892 | False | 7190.0 | 7190 | 100.0000 | 1 | 3893 | 1 | chr3B.!!$F2 | 3892 |
1 | TraesCS3B01G254100 | chr3D | 311664557 | 311669178 | 4621 | True | 2884.5 | 5552 | 93.2495 | 1 | 3576 | 2 | chr3D.!!$R1 | 3575 |
2 | TraesCS3B01G254100 | chr3A | 420739122 | 420743440 | 4318 | False | 2873.5 | 5480 | 95.0730 | 1 | 3576 | 2 | chr3A.!!$F2 | 3575 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
609 | 615 | 2.158608 | CCTGGTTGTGGTCTCCTTTTCT | 60.159 | 50.000 | 0.00 | 0.0 | 0.00 | 2.52 | F |
1290 | 1297 | 0.167470 | CAGCTTGTGCAATGTCTCCG | 59.833 | 55.000 | 0.00 | 0.0 | 42.74 | 4.63 | F |
2403 | 2410 | 1.401552 | TGCGCTATTTCTGATTGCACC | 59.598 | 47.619 | 9.73 | 0.0 | 0.00 | 5.01 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
2304 | 2311 | 0.182775 | ACACTCCACCACCCTCAAAC | 59.817 | 55.0 | 0.0 | 0.0 | 0.0 | 2.93 | R |
2868 | 2875 | 0.612744 | TCCACGCCATCATGACAGAA | 59.387 | 50.0 | 0.0 | 0.0 | 0.0 | 3.02 | R |
3464 | 4685 | 0.031994 | AGGTTGCGTTTGACATTGGC | 59.968 | 50.0 | 0.0 | 0.0 | 0.0 | 4.52 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
105 | 106 | 2.728013 | ACCTGGCCATCTATAGGGTCTA | 59.272 | 50.000 | 5.51 | 0.00 | 30.62 | 2.59 |
199 | 200 | 9.423061 | GGCACTTACAGATCAACAAATAAAAAT | 57.577 | 29.630 | 0.00 | 0.00 | 0.00 | 1.82 |
263 | 264 | 8.168725 | TGTTATAATCTTATACTCCCTCCGTCT | 58.831 | 37.037 | 0.00 | 0.00 | 0.00 | 4.18 |
460 | 466 | 8.126700 | AGTCTGTTAAATTTACAAGTTGAACGG | 58.873 | 33.333 | 10.54 | 6.83 | 0.00 | 4.44 |
487 | 493 | 8.514330 | TTAGCATTAGGGTAAACCAACATTAG | 57.486 | 34.615 | 0.81 | 0.00 | 43.89 | 1.73 |
522 | 528 | 7.730364 | ATTATAAAGGCACCGACAATTCTAG | 57.270 | 36.000 | 0.00 | 0.00 | 0.00 | 2.43 |
609 | 615 | 2.158608 | CCTGGTTGTGGTCTCCTTTTCT | 60.159 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
616 | 622 | 4.199310 | TGTGGTCTCCTTTTCTCTTTGTG | 58.801 | 43.478 | 0.00 | 0.00 | 0.00 | 3.33 |
714 | 720 | 6.524101 | AGTTGAGACTTCCTAGATTCTCAC | 57.476 | 41.667 | 10.36 | 7.56 | 43.23 | 3.51 |
722 | 728 | 8.010105 | AGACTTCCTAGATTCTCACCTCATATT | 58.990 | 37.037 | 0.00 | 0.00 | 0.00 | 1.28 |
749 | 756 | 6.737720 | TTACTAATCAGCAGGATCATCACT | 57.262 | 37.500 | 0.00 | 0.00 | 34.28 | 3.41 |
1058 | 1065 | 5.095691 | AGCATCAACTCGTTAAACACTTG | 57.904 | 39.130 | 0.00 | 0.00 | 0.00 | 3.16 |
1071 | 1078 | 6.371389 | GTTAAACACTTGTCATTACCAGAGC | 58.629 | 40.000 | 0.00 | 0.00 | 0.00 | 4.09 |
1100 | 1107 | 4.056740 | CAACATACTGCTCAGCATAGAGG | 58.943 | 47.826 | 0.00 | 0.00 | 38.13 | 3.69 |
1290 | 1297 | 0.167470 | CAGCTTGTGCAATGTCTCCG | 59.833 | 55.000 | 0.00 | 0.00 | 42.74 | 4.63 |
1591 | 1598 | 1.476833 | GGGGTTTTGAGCACTCTGTGA | 60.477 | 52.381 | 1.52 | 0.00 | 35.23 | 3.58 |
1693 | 1700 | 2.120232 | CGCCAGTCATATCGTCAACTC | 58.880 | 52.381 | 0.00 | 0.00 | 0.00 | 3.01 |
1842 | 1849 | 1.614711 | CATAGCCCATGGTGGTGGT | 59.385 | 57.895 | 11.73 | 3.19 | 37.57 | 4.16 |
1926 | 1933 | 3.934962 | GGCGGAGGGAGGAGATGC | 61.935 | 72.222 | 0.00 | 0.00 | 0.00 | 3.91 |
1986 | 1993 | 1.985662 | CCACTGCATTGCCCATGGT | 60.986 | 57.895 | 11.73 | 0.00 | 32.81 | 3.55 |
2082 | 2089 | 1.754226 | GGTGGAAAAAGGTGTCAGCAA | 59.246 | 47.619 | 4.59 | 0.00 | 0.00 | 3.91 |
2328 | 2335 | 4.660938 | GGTGGTGGAGTGTGCCCC | 62.661 | 72.222 | 0.00 | 0.00 | 0.00 | 5.80 |
2334 | 2341 | 2.360475 | GGAGTGTGCCCCAAGAGC | 60.360 | 66.667 | 0.00 | 0.00 | 0.00 | 4.09 |
2403 | 2410 | 1.401552 | TGCGCTATTTCTGATTGCACC | 59.598 | 47.619 | 9.73 | 0.00 | 0.00 | 5.01 |
2868 | 2875 | 2.338015 | TAACTCGGAGAACGGCGCT | 61.338 | 57.895 | 12.86 | 0.00 | 44.45 | 5.92 |
2990 | 3008 | 6.016276 | ACATTTCACCAATTGTTGTCCTAGTC | 60.016 | 38.462 | 4.43 | 0.00 | 0.00 | 2.59 |
3002 | 3020 | 2.960384 | TGTCCTAGTCGTTTGGAAGTGA | 59.040 | 45.455 | 0.00 | 0.00 | 32.33 | 3.41 |
3005 | 3023 | 5.105877 | TGTCCTAGTCGTTTGGAAGTGATAG | 60.106 | 44.000 | 0.00 | 0.00 | 32.33 | 2.08 |
3006 | 3024 | 4.401519 | TCCTAGTCGTTTGGAAGTGATAGG | 59.598 | 45.833 | 0.00 | 0.00 | 0.00 | 2.57 |
3053 | 3071 | 0.543410 | TAAGGGAGAGCGTTGTGGGA | 60.543 | 55.000 | 0.00 | 0.00 | 0.00 | 4.37 |
3122 | 3140 | 7.093992 | GCCCTTGCTTTGTGTTTATTACAATA | 58.906 | 34.615 | 0.00 | 0.00 | 37.81 | 1.90 |
3149 | 3167 | 5.921962 | TGTAGTCTGATACTGCTTCACAT | 57.078 | 39.130 | 0.00 | 0.00 | 41.10 | 3.21 |
3172 | 3190 | 5.860941 | TTCCTACTTGGATGTCATCTCTC | 57.139 | 43.478 | 12.54 | 0.00 | 45.68 | 3.20 |
3176 | 3194 | 1.137675 | CTTGGATGTCATCTCTCCGCA | 59.862 | 52.381 | 12.54 | 0.00 | 31.36 | 5.69 |
3190 | 3208 | 0.951558 | TCCGCAGTTTGCTTTCCTTC | 59.048 | 50.000 | 0.00 | 0.00 | 42.25 | 3.46 |
3214 | 3232 | 4.002982 | TGTTTCTGGTAATAGTGCAGCAG | 58.997 | 43.478 | 0.00 | 0.00 | 40.74 | 4.24 |
3221 | 3239 | 4.899457 | TGGTAATAGTGCAGCAGGTAGTAT | 59.101 | 41.667 | 0.00 | 0.00 | 30.03 | 2.12 |
3222 | 3240 | 6.072649 | TGGTAATAGTGCAGCAGGTAGTATA | 58.927 | 40.000 | 0.00 | 0.00 | 28.90 | 1.47 |
3248 | 3275 | 1.063166 | GGCGGGTAGAAGTACGTCG | 59.937 | 63.158 | 3.05 | 0.00 | 32.79 | 5.12 |
3250 | 3277 | 0.247854 | GCGGGTAGAAGTACGTCGTC | 60.248 | 60.000 | 0.00 | 1.18 | 32.46 | 4.20 |
3339 | 3366 | 2.795175 | TCGGATAATTCTCTGTCGCC | 57.205 | 50.000 | 0.09 | 0.00 | 0.00 | 5.54 |
3345 | 3379 | 4.212214 | GGATAATTCTCTGTCGCCATGAAC | 59.788 | 45.833 | 0.00 | 0.00 | 0.00 | 3.18 |
3355 | 3389 | 0.794229 | CGCCATGAACGTTGATGCAC | 60.794 | 55.000 | 20.63 | 13.86 | 0.00 | 4.57 |
3358 | 3393 | 2.521996 | CCATGAACGTTGATGCACATG | 58.478 | 47.619 | 20.63 | 17.48 | 36.10 | 3.21 |
3376 | 3411 | 5.582269 | GCACATGTCATTGCTAGAAACTCTA | 59.418 | 40.000 | 0.00 | 0.00 | 35.74 | 2.43 |
3379 | 3414 | 8.759641 | CACATGTCATTGCTAGAAACTCTATAC | 58.240 | 37.037 | 0.00 | 0.00 | 0.00 | 1.47 |
3380 | 3415 | 7.928706 | ACATGTCATTGCTAGAAACTCTATACC | 59.071 | 37.037 | 0.00 | 0.00 | 0.00 | 2.73 |
3381 | 3416 | 7.418337 | TGTCATTGCTAGAAACTCTATACCA | 57.582 | 36.000 | 0.00 | 0.00 | 0.00 | 3.25 |
3382 | 3417 | 7.847096 | TGTCATTGCTAGAAACTCTATACCAA | 58.153 | 34.615 | 0.00 | 0.00 | 0.00 | 3.67 |
3383 | 3418 | 7.764443 | TGTCATTGCTAGAAACTCTATACCAAC | 59.236 | 37.037 | 0.00 | 0.00 | 0.00 | 3.77 |
3384 | 3419 | 7.224949 | GTCATTGCTAGAAACTCTATACCAACC | 59.775 | 40.741 | 0.00 | 0.00 | 0.00 | 3.77 |
3385 | 3420 | 6.614694 | TTGCTAGAAACTCTATACCAACCA | 57.385 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3386 | 3421 | 6.614694 | TGCTAGAAACTCTATACCAACCAA | 57.385 | 37.500 | 0.00 | 0.00 | 0.00 | 3.67 |
3388 | 3423 | 7.455058 | TGCTAGAAACTCTATACCAACCAAAA | 58.545 | 34.615 | 0.00 | 0.00 | 0.00 | 2.44 |
3391 | 3426 | 7.506328 | AGAAACTCTATACCAACCAAAACAC | 57.494 | 36.000 | 0.00 | 0.00 | 0.00 | 3.32 |
3392 | 3427 | 6.489022 | AGAAACTCTATACCAACCAAAACACC | 59.511 | 38.462 | 0.00 | 0.00 | 0.00 | 4.16 |
3396 | 3431 | 4.828387 | TCTATACCAACCAAAACACCAACC | 59.172 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
3397 | 3432 | 1.645710 | ACCAACCAAAACACCAACCA | 58.354 | 45.000 | 0.00 | 0.00 | 0.00 | 3.67 |
3398 | 3433 | 1.978580 | ACCAACCAAAACACCAACCAA | 59.021 | 42.857 | 0.00 | 0.00 | 0.00 | 3.67 |
3400 | 3435 | 3.006247 | CCAACCAAAACACCAACCAAAG | 58.994 | 45.455 | 0.00 | 0.00 | 0.00 | 2.77 |
3401 | 3436 | 3.307059 | CCAACCAAAACACCAACCAAAGA | 60.307 | 43.478 | 0.00 | 0.00 | 0.00 | 2.52 |
3422 | 4643 | 2.192263 | GACCCTGGGAATCTGACTTCT | 58.808 | 52.381 | 22.23 | 0.00 | 0.00 | 2.85 |
3482 | 4714 | 1.274798 | CGCCAATGTCAAACGCAACC | 61.275 | 55.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3483 | 4715 | 0.031994 | GCCAATGTCAAACGCAACCT | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 3.50 |
3484 | 4716 | 1.930371 | GCCAATGTCAAACGCAACCTC | 60.930 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3485 | 4717 | 1.662876 | CCAATGTCAAACGCAACCTCG | 60.663 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
3486 | 4718 | 1.262950 | CAATGTCAAACGCAACCTCGA | 59.737 | 47.619 | 0.00 | 0.00 | 0.00 | 4.04 |
3487 | 4719 | 1.808411 | ATGTCAAACGCAACCTCGAT | 58.192 | 45.000 | 0.00 | 0.00 | 0.00 | 3.59 |
3488 | 4720 | 1.588674 | TGTCAAACGCAACCTCGATT | 58.411 | 45.000 | 0.00 | 0.00 | 0.00 | 3.34 |
3489 | 4721 | 1.262950 | TGTCAAACGCAACCTCGATTG | 59.737 | 47.619 | 0.00 | 0.00 | 41.53 | 2.67 |
3529 | 4761 | 2.096980 | CAGCACGCAACATGAATGATCT | 59.903 | 45.455 | 0.00 | 0.00 | 0.00 | 2.75 |
3576 | 4808 | 5.925509 | TGCAGTTAACTCAAGAGTAAAGGT | 58.074 | 37.500 | 4.77 | 0.00 | 41.58 | 3.50 |
3577 | 4809 | 6.354130 | TGCAGTTAACTCAAGAGTAAAGGTT | 58.646 | 36.000 | 4.77 | 0.00 | 41.58 | 3.50 |
3578 | 4810 | 7.502696 | TGCAGTTAACTCAAGAGTAAAGGTTA | 58.497 | 34.615 | 4.77 | 0.00 | 41.58 | 2.85 |
3579 | 4811 | 7.988599 | TGCAGTTAACTCAAGAGTAAAGGTTAA | 59.011 | 33.333 | 4.77 | 0.00 | 41.58 | 2.01 |
3580 | 4812 | 9.000486 | GCAGTTAACTCAAGAGTAAAGGTTAAT | 58.000 | 33.333 | 4.77 | 0.00 | 41.58 | 1.40 |
3586 | 4818 | 8.494016 | ACTCAAGAGTAAAGGTTAATATGCAC | 57.506 | 34.615 | 0.00 | 0.00 | 40.43 | 4.57 |
3587 | 4819 | 8.100791 | ACTCAAGAGTAAAGGTTAATATGCACA | 58.899 | 33.333 | 0.00 | 0.00 | 40.43 | 4.57 |
3588 | 4820 | 9.113838 | CTCAAGAGTAAAGGTTAATATGCACAT | 57.886 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
3589 | 4821 | 8.892723 | TCAAGAGTAAAGGTTAATATGCACATG | 58.107 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
3590 | 4822 | 8.677300 | CAAGAGTAAAGGTTAATATGCACATGT | 58.323 | 33.333 | 0.00 | 0.00 | 0.00 | 3.21 |
3591 | 4823 | 9.899661 | AAGAGTAAAGGTTAATATGCACATGTA | 57.100 | 29.630 | 0.00 | 0.00 | 0.00 | 2.29 |
3592 | 4824 | 9.547753 | AGAGTAAAGGTTAATATGCACATGTAG | 57.452 | 33.333 | 0.00 | 0.00 | 0.00 | 2.74 |
3593 | 4825 | 8.154649 | AGTAAAGGTTAATATGCACATGTAGC | 57.845 | 34.615 | 0.00 | 5.65 | 0.00 | 3.58 |
3594 | 4826 | 5.673337 | AAGGTTAATATGCACATGTAGCG | 57.327 | 39.130 | 0.00 | 0.00 | 33.85 | 4.26 |
3595 | 4827 | 4.956085 | AGGTTAATATGCACATGTAGCGA | 58.044 | 39.130 | 0.00 | 0.00 | 33.85 | 4.93 |
3596 | 4828 | 4.750098 | AGGTTAATATGCACATGTAGCGAC | 59.250 | 41.667 | 0.00 | 0.00 | 33.85 | 5.19 |
3597 | 4829 | 4.084013 | GGTTAATATGCACATGTAGCGACC | 60.084 | 45.833 | 0.00 | 4.56 | 33.85 | 4.79 |
3598 | 4830 | 2.908688 | ATATGCACATGTAGCGACCA | 57.091 | 45.000 | 0.00 | 0.00 | 33.85 | 4.02 |
3599 | 4831 | 2.223537 | TATGCACATGTAGCGACCAG | 57.776 | 50.000 | 0.00 | 0.00 | 33.85 | 4.00 |
3600 | 4832 | 0.536724 | ATGCACATGTAGCGACCAGA | 59.463 | 50.000 | 0.00 | 0.00 | 33.85 | 3.86 |
3601 | 4833 | 0.536724 | TGCACATGTAGCGACCAGAT | 59.463 | 50.000 | 0.00 | 0.00 | 33.85 | 2.90 |
3602 | 4834 | 1.212616 | GCACATGTAGCGACCAGATC | 58.787 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
3603 | 4835 | 1.202463 | GCACATGTAGCGACCAGATCT | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
3604 | 4836 | 2.736978 | CACATGTAGCGACCAGATCTC | 58.263 | 52.381 | 0.00 | 0.00 | 0.00 | 2.75 |
3605 | 4837 | 2.099756 | CACATGTAGCGACCAGATCTCA | 59.900 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3606 | 4838 | 2.360483 | ACATGTAGCGACCAGATCTCAG | 59.640 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
3607 | 4839 | 2.420058 | TGTAGCGACCAGATCTCAGA | 57.580 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3608 | 4840 | 2.017782 | TGTAGCGACCAGATCTCAGAC | 58.982 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3609 | 4841 | 2.017782 | GTAGCGACCAGATCTCAGACA | 58.982 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
3610 | 4842 | 1.102154 | AGCGACCAGATCTCAGACAG | 58.898 | 55.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3611 | 4843 | 0.102120 | GCGACCAGATCTCAGACAGG | 59.898 | 60.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3612 | 4844 | 0.743688 | CGACCAGATCTCAGACAGGG | 59.256 | 60.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3613 | 4845 | 1.683319 | CGACCAGATCTCAGACAGGGA | 60.683 | 57.143 | 0.00 | 0.00 | 0.00 | 4.20 |
3614 | 4846 | 2.676748 | GACCAGATCTCAGACAGGGAT | 58.323 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3615 | 4847 | 2.627699 | GACCAGATCTCAGACAGGGATC | 59.372 | 54.545 | 0.00 | 0.00 | 36.92 | 3.36 |
3616 | 4848 | 1.612950 | CCAGATCTCAGACAGGGATCG | 59.387 | 57.143 | 2.34 | 0.00 | 40.28 | 3.69 |
3617 | 4849 | 1.612950 | CAGATCTCAGACAGGGATCGG | 59.387 | 57.143 | 2.34 | 0.00 | 40.28 | 4.18 |
3618 | 4850 | 1.216678 | AGATCTCAGACAGGGATCGGT | 59.783 | 52.381 | 2.34 | 0.00 | 40.28 | 4.69 |
3619 | 4851 | 2.443632 | AGATCTCAGACAGGGATCGGTA | 59.556 | 50.000 | 2.34 | 0.00 | 40.28 | 4.02 |
3620 | 4852 | 2.820728 | TCTCAGACAGGGATCGGTAA | 57.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
3621 | 4853 | 3.314307 | TCTCAGACAGGGATCGGTAAT | 57.686 | 47.619 | 0.00 | 0.00 | 0.00 | 1.89 |
3622 | 4854 | 2.959030 | TCTCAGACAGGGATCGGTAATG | 59.041 | 50.000 | 0.00 | 0.00 | 0.00 | 1.90 |
3623 | 4855 | 1.412710 | TCAGACAGGGATCGGTAATGC | 59.587 | 52.381 | 0.00 | 0.00 | 0.00 | 3.56 |
3624 | 4856 | 1.414181 | CAGACAGGGATCGGTAATGCT | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 3.79 |
3625 | 4857 | 1.414181 | AGACAGGGATCGGTAATGCTG | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 4.41 |
3626 | 4858 | 1.412710 | GACAGGGATCGGTAATGCTGA | 59.587 | 52.381 | 0.00 | 0.00 | 36.82 | 4.26 |
3627 | 4859 | 2.037772 | GACAGGGATCGGTAATGCTGAT | 59.962 | 50.000 | 0.00 | 0.00 | 45.41 | 2.90 |
3628 | 4860 | 3.239449 | ACAGGGATCGGTAATGCTGATA | 58.761 | 45.455 | 0.00 | 0.00 | 42.93 | 2.15 |
3629 | 4861 | 3.006967 | ACAGGGATCGGTAATGCTGATAC | 59.993 | 47.826 | 0.00 | 0.00 | 42.93 | 2.24 |
3630 | 4862 | 2.231478 | AGGGATCGGTAATGCTGATACG | 59.769 | 50.000 | 0.00 | 0.00 | 43.39 | 3.06 |
3631 | 4863 | 1.993370 | GGATCGGTAATGCTGATACGC | 59.007 | 52.381 | 0.00 | 0.00 | 42.93 | 4.42 |
3632 | 4864 | 1.649171 | GATCGGTAATGCTGATACGCG | 59.351 | 52.381 | 3.53 | 3.53 | 42.93 | 6.01 |
3633 | 4865 | 0.937699 | TCGGTAATGCTGATACGCGC | 60.938 | 55.000 | 5.73 | 0.00 | 0.00 | 6.86 |
3634 | 4866 | 1.212455 | CGGTAATGCTGATACGCGCA | 61.212 | 55.000 | 5.73 | 0.00 | 40.87 | 6.09 |
3635 | 4867 | 0.508641 | GGTAATGCTGATACGCGCAG | 59.491 | 55.000 | 5.73 | 6.98 | 39.82 | 5.18 |
3636 | 4868 | 1.209128 | GTAATGCTGATACGCGCAGT | 58.791 | 50.000 | 5.73 | 9.29 | 39.82 | 4.40 |
3637 | 4869 | 2.390938 | GTAATGCTGATACGCGCAGTA | 58.609 | 47.619 | 5.73 | 11.41 | 39.82 | 2.74 |
3638 | 4870 | 1.209128 | AATGCTGATACGCGCAGTAC | 58.791 | 50.000 | 5.73 | 6.62 | 39.82 | 2.73 |
3639 | 4871 | 0.385751 | ATGCTGATACGCGCAGTACT | 59.614 | 50.000 | 5.73 | 0.00 | 39.82 | 2.73 |
3640 | 4872 | 0.172578 | TGCTGATACGCGCAGTACTT | 59.827 | 50.000 | 5.73 | 0.00 | 38.29 | 2.24 |
3641 | 4873 | 0.572590 | GCTGATACGCGCAGTACTTG | 59.427 | 55.000 | 5.73 | 5.77 | 38.29 | 3.16 |
3642 | 4874 | 1.797713 | GCTGATACGCGCAGTACTTGA | 60.798 | 52.381 | 5.73 | 0.00 | 38.29 | 3.02 |
3643 | 4875 | 2.526077 | CTGATACGCGCAGTACTTGAA | 58.474 | 47.619 | 5.73 | 0.00 | 38.29 | 2.69 |
3644 | 4876 | 2.526077 | TGATACGCGCAGTACTTGAAG | 58.474 | 47.619 | 5.73 | 0.00 | 38.29 | 3.02 |
3645 | 4877 | 2.162809 | TGATACGCGCAGTACTTGAAGA | 59.837 | 45.455 | 5.73 | 0.00 | 38.29 | 2.87 |
3646 | 4878 | 2.710220 | TACGCGCAGTACTTGAAGAA | 57.290 | 45.000 | 5.73 | 0.00 | 0.00 | 2.52 |
3647 | 4879 | 2.080286 | ACGCGCAGTACTTGAAGAAT | 57.920 | 45.000 | 5.73 | 0.00 | 0.00 | 2.40 |
3648 | 4880 | 2.413837 | ACGCGCAGTACTTGAAGAATT | 58.586 | 42.857 | 5.73 | 0.00 | 0.00 | 2.17 |
3649 | 4881 | 2.806244 | ACGCGCAGTACTTGAAGAATTT | 59.194 | 40.909 | 5.73 | 0.00 | 0.00 | 1.82 |
3650 | 4882 | 3.991773 | ACGCGCAGTACTTGAAGAATTTA | 59.008 | 39.130 | 5.73 | 0.00 | 0.00 | 1.40 |
3651 | 4883 | 4.630069 | ACGCGCAGTACTTGAAGAATTTAT | 59.370 | 37.500 | 5.73 | 0.00 | 0.00 | 1.40 |
3652 | 4884 | 5.808540 | ACGCGCAGTACTTGAAGAATTTATA | 59.191 | 36.000 | 5.73 | 0.00 | 0.00 | 0.98 |
3653 | 4885 | 6.311935 | ACGCGCAGTACTTGAAGAATTTATAA | 59.688 | 34.615 | 5.73 | 0.00 | 0.00 | 0.98 |
3654 | 4886 | 7.011109 | ACGCGCAGTACTTGAAGAATTTATAAT | 59.989 | 33.333 | 5.73 | 0.00 | 0.00 | 1.28 |
3655 | 4887 | 8.484799 | CGCGCAGTACTTGAAGAATTTATAATA | 58.515 | 33.333 | 8.75 | 0.00 | 0.00 | 0.98 |
3656 | 4888 | 9.798885 | GCGCAGTACTTGAAGAATTTATAATAG | 57.201 | 33.333 | 0.30 | 0.00 | 0.00 | 1.73 |
3679 | 4911 | 9.751542 | ATAGAGTAGCAATCACACACTTATTAC | 57.248 | 33.333 | 0.00 | 0.00 | 0.00 | 1.89 |
3680 | 4912 | 7.611770 | AGAGTAGCAATCACACACTTATTACA | 58.388 | 34.615 | 0.00 | 0.00 | 0.00 | 2.41 |
3681 | 4913 | 8.260818 | AGAGTAGCAATCACACACTTATTACAT | 58.739 | 33.333 | 0.00 | 0.00 | 0.00 | 2.29 |
3682 | 4914 | 8.792830 | AGTAGCAATCACACACTTATTACATT | 57.207 | 30.769 | 0.00 | 0.00 | 0.00 | 2.71 |
3683 | 4915 | 8.668353 | AGTAGCAATCACACACTTATTACATTG | 58.332 | 33.333 | 0.00 | 0.00 | 0.00 | 2.82 |
3684 | 4916 | 7.686438 | AGCAATCACACACTTATTACATTGA | 57.314 | 32.000 | 0.00 | 0.00 | 0.00 | 2.57 |
3685 | 4917 | 8.109705 | AGCAATCACACACTTATTACATTGAA | 57.890 | 30.769 | 0.00 | 0.00 | 0.00 | 2.69 |
3686 | 4918 | 8.742777 | AGCAATCACACACTTATTACATTGAAT | 58.257 | 29.630 | 0.00 | 0.00 | 0.00 | 2.57 |
3687 | 4919 | 8.800972 | GCAATCACACACTTATTACATTGAATG | 58.199 | 33.333 | 3.16 | 3.16 | 0.00 | 2.67 |
3688 | 4920 | 9.844790 | CAATCACACACTTATTACATTGAATGT | 57.155 | 29.630 | 15.80 | 15.80 | 46.92 | 2.71 |
3690 | 4922 | 8.846943 | TCACACACTTATTACATTGAATGTCT | 57.153 | 30.769 | 14.91 | 6.33 | 43.67 | 3.41 |
3691 | 4923 | 8.935844 | TCACACACTTATTACATTGAATGTCTC | 58.064 | 33.333 | 14.91 | 0.00 | 43.67 | 3.36 |
3692 | 4924 | 8.720562 | CACACACTTATTACATTGAATGTCTCA | 58.279 | 33.333 | 14.91 | 0.67 | 43.67 | 3.27 |
3743 | 4975 | 7.900782 | GCTTAAGGCCATCTAATAACGATAA | 57.099 | 36.000 | 5.01 | 0.00 | 34.27 | 1.75 |
3744 | 4976 | 7.740246 | GCTTAAGGCCATCTAATAACGATAAC | 58.260 | 38.462 | 5.01 | 0.00 | 34.27 | 1.89 |
3745 | 4977 | 7.386848 | GCTTAAGGCCATCTAATAACGATAACA | 59.613 | 37.037 | 5.01 | 0.00 | 34.27 | 2.41 |
3746 | 4978 | 8.827177 | TTAAGGCCATCTAATAACGATAACAG | 57.173 | 34.615 | 5.01 | 0.00 | 0.00 | 3.16 |
3747 | 4979 | 5.238583 | AGGCCATCTAATAACGATAACAGC | 58.761 | 41.667 | 5.01 | 0.00 | 0.00 | 4.40 |
3748 | 4980 | 4.091509 | GGCCATCTAATAACGATAACAGCG | 59.908 | 45.833 | 0.00 | 0.00 | 0.00 | 5.18 |
3749 | 4981 | 4.091509 | GCCATCTAATAACGATAACAGCGG | 59.908 | 45.833 | 0.00 | 0.00 | 0.00 | 5.52 |
3750 | 4982 | 5.466819 | CCATCTAATAACGATAACAGCGGA | 58.533 | 41.667 | 0.00 | 0.00 | 0.00 | 5.54 |
3751 | 4983 | 5.924254 | CCATCTAATAACGATAACAGCGGAA | 59.076 | 40.000 | 0.00 | 0.00 | 0.00 | 4.30 |
3752 | 4984 | 6.422701 | CCATCTAATAACGATAACAGCGGAAA | 59.577 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
3753 | 4985 | 7.359264 | CCATCTAATAACGATAACAGCGGAAAG | 60.359 | 40.741 | 0.00 | 0.00 | 0.00 | 2.62 |
3766 | 4998 | 3.682372 | GCGGAAAGCTTGGAAGATAAG | 57.318 | 47.619 | 0.00 | 0.00 | 44.04 | 1.73 |
3767 | 4999 | 3.010420 | GCGGAAAGCTTGGAAGATAAGT | 58.990 | 45.455 | 0.00 | 0.00 | 44.04 | 2.24 |
3768 | 5000 | 3.181506 | GCGGAAAGCTTGGAAGATAAGTG | 60.182 | 47.826 | 0.00 | 0.00 | 44.04 | 3.16 |
3769 | 5001 | 4.253685 | CGGAAAGCTTGGAAGATAAGTGA | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 3.41 |
3770 | 5002 | 4.331168 | CGGAAAGCTTGGAAGATAAGTGAG | 59.669 | 45.833 | 0.00 | 0.00 | 0.00 | 3.51 |
3771 | 5003 | 5.249420 | GGAAAGCTTGGAAGATAAGTGAGT | 58.751 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
3772 | 5004 | 5.352846 | GGAAAGCTTGGAAGATAAGTGAGTC | 59.647 | 44.000 | 0.00 | 0.00 | 0.00 | 3.36 |
3773 | 5005 | 4.479786 | AGCTTGGAAGATAAGTGAGTCC | 57.520 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
3774 | 5006 | 3.840666 | AGCTTGGAAGATAAGTGAGTCCA | 59.159 | 43.478 | 0.00 | 0.00 | 36.59 | 4.02 |
3775 | 5007 | 4.472833 | AGCTTGGAAGATAAGTGAGTCCAT | 59.527 | 41.667 | 0.00 | 0.00 | 38.16 | 3.41 |
3776 | 5008 | 4.813697 | GCTTGGAAGATAAGTGAGTCCATC | 59.186 | 45.833 | 0.00 | 0.00 | 38.16 | 3.51 |
3777 | 5009 | 5.627735 | GCTTGGAAGATAAGTGAGTCCATCA | 60.628 | 44.000 | 0.00 | 0.00 | 38.16 | 3.07 |
3778 | 5010 | 6.373005 | TTGGAAGATAAGTGAGTCCATCAA | 57.627 | 37.500 | 0.00 | 0.00 | 40.43 | 2.57 |
3779 | 5011 | 5.734720 | TGGAAGATAAGTGAGTCCATCAAC | 58.265 | 41.667 | 0.00 | 0.00 | 40.43 | 3.18 |
3780 | 5012 | 5.485353 | TGGAAGATAAGTGAGTCCATCAACT | 59.515 | 40.000 | 0.00 | 0.00 | 40.43 | 3.16 |
3781 | 5013 | 6.045955 | GGAAGATAAGTGAGTCCATCAACTC | 58.954 | 44.000 | 0.00 | 0.00 | 44.87 | 3.01 |
3782 | 5014 | 5.606348 | AGATAAGTGAGTCCATCAACTCC | 57.394 | 43.478 | 1.88 | 0.00 | 44.17 | 3.85 |
3783 | 5015 | 5.026121 | AGATAAGTGAGTCCATCAACTCCA | 58.974 | 41.667 | 1.88 | 0.00 | 44.17 | 3.86 |
3784 | 5016 | 5.485353 | AGATAAGTGAGTCCATCAACTCCAA | 59.515 | 40.000 | 1.88 | 0.00 | 44.17 | 3.53 |
3785 | 5017 | 3.409026 | AGTGAGTCCATCAACTCCAAC | 57.591 | 47.619 | 1.88 | 0.00 | 44.17 | 3.77 |
3786 | 5018 | 2.069273 | GTGAGTCCATCAACTCCAACG | 58.931 | 52.381 | 1.88 | 0.00 | 44.17 | 4.10 |
3787 | 5019 | 1.967779 | TGAGTCCATCAACTCCAACGA | 59.032 | 47.619 | 0.00 | 0.00 | 44.17 | 3.85 |
3788 | 5020 | 2.288825 | TGAGTCCATCAACTCCAACGAC | 60.289 | 50.000 | 0.00 | 0.00 | 44.17 | 4.34 |
3789 | 5021 | 1.691976 | AGTCCATCAACTCCAACGACA | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 4.35 |
3790 | 5022 | 2.303022 | AGTCCATCAACTCCAACGACAT | 59.697 | 45.455 | 0.00 | 0.00 | 0.00 | 3.06 |
3791 | 5023 | 2.673368 | GTCCATCAACTCCAACGACATC | 59.327 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3792 | 5024 | 2.301583 | TCCATCAACTCCAACGACATCA | 59.698 | 45.455 | 0.00 | 0.00 | 0.00 | 3.07 |
3793 | 5025 | 2.416547 | CCATCAACTCCAACGACATCAC | 59.583 | 50.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3794 | 5026 | 3.329386 | CATCAACTCCAACGACATCACT | 58.671 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3795 | 5027 | 2.754472 | TCAACTCCAACGACATCACTG | 58.246 | 47.619 | 0.00 | 0.00 | 0.00 | 3.66 |
3796 | 5028 | 2.364002 | TCAACTCCAACGACATCACTGA | 59.636 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3797 | 5029 | 2.732412 | ACTCCAACGACATCACTGAG | 57.268 | 50.000 | 0.00 | 0.00 | 0.00 | 3.35 |
3798 | 5030 | 1.964223 | ACTCCAACGACATCACTGAGT | 59.036 | 47.619 | 0.00 | 0.00 | 0.00 | 3.41 |
3799 | 5031 | 3.154710 | ACTCCAACGACATCACTGAGTA | 58.845 | 45.455 | 0.00 | 0.00 | 30.35 | 2.59 |
3800 | 5032 | 3.764434 | ACTCCAACGACATCACTGAGTAT | 59.236 | 43.478 | 0.00 | 0.00 | 30.35 | 2.12 |
3801 | 5033 | 4.948004 | ACTCCAACGACATCACTGAGTATA | 59.052 | 41.667 | 0.00 | 0.00 | 30.35 | 1.47 |
3802 | 5034 | 5.417894 | ACTCCAACGACATCACTGAGTATAA | 59.582 | 40.000 | 0.00 | 0.00 | 30.35 | 0.98 |
3803 | 5035 | 5.891451 | TCCAACGACATCACTGAGTATAAG | 58.109 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
3804 | 5036 | 5.650703 | TCCAACGACATCACTGAGTATAAGA | 59.349 | 40.000 | 0.00 | 0.00 | 0.00 | 2.10 |
3805 | 5037 | 6.321435 | TCCAACGACATCACTGAGTATAAGAT | 59.679 | 38.462 | 0.00 | 0.00 | 0.00 | 2.40 |
3806 | 5038 | 6.638873 | CCAACGACATCACTGAGTATAAGATC | 59.361 | 42.308 | 0.00 | 0.00 | 0.00 | 2.75 |
3807 | 5039 | 6.944234 | ACGACATCACTGAGTATAAGATCA | 57.056 | 37.500 | 0.00 | 0.00 | 0.00 | 2.92 |
3808 | 5040 | 6.730175 | ACGACATCACTGAGTATAAGATCAC | 58.270 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3809 | 5041 | 5.848559 | CGACATCACTGAGTATAAGATCACG | 59.151 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3810 | 5042 | 6.292919 | CGACATCACTGAGTATAAGATCACGA | 60.293 | 42.308 | 0.00 | 0.00 | 0.00 | 4.35 |
3811 | 5043 | 6.730175 | ACATCACTGAGTATAAGATCACGAC | 58.270 | 40.000 | 0.00 | 0.00 | 0.00 | 4.34 |
3812 | 5044 | 5.752892 | TCACTGAGTATAAGATCACGACC | 57.247 | 43.478 | 0.00 | 0.00 | 0.00 | 4.79 |
3813 | 5045 | 5.437946 | TCACTGAGTATAAGATCACGACCT | 58.562 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
3814 | 5046 | 6.589135 | TCACTGAGTATAAGATCACGACCTA | 58.411 | 40.000 | 0.00 | 0.00 | 0.00 | 3.08 |
3815 | 5047 | 7.052248 | TCACTGAGTATAAGATCACGACCTAA | 58.948 | 38.462 | 0.00 | 0.00 | 0.00 | 2.69 |
3816 | 5048 | 7.226918 | TCACTGAGTATAAGATCACGACCTAAG | 59.773 | 40.741 | 0.00 | 0.00 | 0.00 | 2.18 |
3817 | 5049 | 7.226918 | CACTGAGTATAAGATCACGACCTAAGA | 59.773 | 40.741 | 0.00 | 0.00 | 0.00 | 2.10 |
3818 | 5050 | 7.227116 | ACTGAGTATAAGATCACGACCTAAGAC | 59.773 | 40.741 | 0.00 | 0.00 | 0.00 | 3.01 |
3819 | 5051 | 7.052248 | TGAGTATAAGATCACGACCTAAGACA | 58.948 | 38.462 | 0.00 | 0.00 | 0.00 | 3.41 |
3820 | 5052 | 7.012138 | TGAGTATAAGATCACGACCTAAGACAC | 59.988 | 40.741 | 0.00 | 0.00 | 0.00 | 3.67 |
3821 | 5053 | 3.870633 | AAGATCACGACCTAAGACACC | 57.129 | 47.619 | 0.00 | 0.00 | 0.00 | 4.16 |
3822 | 5054 | 3.088789 | AGATCACGACCTAAGACACCT | 57.911 | 47.619 | 0.00 | 0.00 | 0.00 | 4.00 |
3823 | 5055 | 3.432378 | AGATCACGACCTAAGACACCTT | 58.568 | 45.455 | 0.00 | 0.00 | 36.43 | 3.50 |
3824 | 5056 | 4.597004 | AGATCACGACCTAAGACACCTTA | 58.403 | 43.478 | 0.00 | 0.00 | 33.94 | 2.69 |
3825 | 5057 | 4.398673 | AGATCACGACCTAAGACACCTTAC | 59.601 | 45.833 | 0.00 | 0.00 | 33.94 | 2.34 |
3826 | 5058 | 3.759581 | TCACGACCTAAGACACCTTACT | 58.240 | 45.455 | 0.00 | 0.00 | 33.94 | 2.24 |
3827 | 5059 | 3.755378 | TCACGACCTAAGACACCTTACTC | 59.245 | 47.826 | 0.00 | 0.00 | 33.94 | 2.59 |
3828 | 5060 | 2.746362 | ACGACCTAAGACACCTTACTCG | 59.254 | 50.000 | 0.00 | 0.00 | 36.72 | 4.18 |
3829 | 5061 | 2.746362 | CGACCTAAGACACCTTACTCGT | 59.254 | 50.000 | 0.00 | 0.00 | 31.57 | 4.18 |
3830 | 5062 | 3.181512 | CGACCTAAGACACCTTACTCGTC | 60.182 | 52.174 | 0.00 | 0.00 | 31.57 | 4.20 |
3831 | 5063 | 2.746362 | ACCTAAGACACCTTACTCGTCG | 59.254 | 50.000 | 0.00 | 0.00 | 34.80 | 5.12 |
3832 | 5064 | 2.746362 | CCTAAGACACCTTACTCGTCGT | 59.254 | 50.000 | 0.00 | 0.00 | 34.80 | 4.34 |
3833 | 5065 | 2.985406 | AAGACACCTTACTCGTCGTC | 57.015 | 50.000 | 0.00 | 0.00 | 34.80 | 4.20 |
3834 | 5066 | 2.181954 | AGACACCTTACTCGTCGTCT | 57.818 | 50.000 | 0.00 | 0.00 | 34.80 | 4.18 |
3835 | 5067 | 1.805345 | AGACACCTTACTCGTCGTCTG | 59.195 | 52.381 | 0.00 | 0.00 | 32.70 | 3.51 |
3836 | 5068 | 1.802960 | GACACCTTACTCGTCGTCTGA | 59.197 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
3837 | 5069 | 2.224606 | ACACCTTACTCGTCGTCTGAA | 58.775 | 47.619 | 0.00 | 0.00 | 0.00 | 3.02 |
3838 | 5070 | 2.620115 | ACACCTTACTCGTCGTCTGAAA | 59.380 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
3839 | 5071 | 3.067180 | ACACCTTACTCGTCGTCTGAAAA | 59.933 | 43.478 | 0.00 | 0.00 | 0.00 | 2.29 |
3840 | 5072 | 3.669122 | CACCTTACTCGTCGTCTGAAAAG | 59.331 | 47.826 | 0.00 | 0.00 | 0.00 | 2.27 |
3841 | 5073 | 3.317430 | ACCTTACTCGTCGTCTGAAAAGT | 59.683 | 43.478 | 0.00 | 0.00 | 0.00 | 2.66 |
3842 | 5074 | 3.913163 | CCTTACTCGTCGTCTGAAAAGTC | 59.087 | 47.826 | 0.00 | 0.00 | 0.00 | 3.01 |
3843 | 5075 | 4.320348 | CCTTACTCGTCGTCTGAAAAGTCT | 60.320 | 45.833 | 0.00 | 0.00 | 0.00 | 3.24 |
3844 | 5076 | 3.001395 | ACTCGTCGTCTGAAAAGTCTG | 57.999 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
3845 | 5077 | 1.716581 | CTCGTCGTCTGAAAAGTCTGC | 59.283 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
3846 | 5078 | 1.066454 | TCGTCGTCTGAAAAGTCTGCA | 59.934 | 47.619 | 0.00 | 0.00 | 0.00 | 4.41 |
3847 | 5079 | 1.858458 | CGTCGTCTGAAAAGTCTGCAA | 59.142 | 47.619 | 0.00 | 0.00 | 0.00 | 4.08 |
3848 | 5080 | 2.347661 | CGTCGTCTGAAAAGTCTGCAAC | 60.348 | 50.000 | 0.00 | 0.00 | 0.00 | 4.17 |
3849 | 5081 | 2.607635 | GTCGTCTGAAAAGTCTGCAACA | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 3.33 |
3850 | 5082 | 3.248602 | GTCGTCTGAAAAGTCTGCAACAT | 59.751 | 43.478 | 0.00 | 0.00 | 0.00 | 2.71 |
3851 | 5083 | 3.248363 | TCGTCTGAAAAGTCTGCAACATG | 59.752 | 43.478 | 0.00 | 0.00 | 0.00 | 3.21 |
3852 | 5084 | 3.248363 | CGTCTGAAAAGTCTGCAACATGA | 59.752 | 43.478 | 0.00 | 0.00 | 0.00 | 3.07 |
3853 | 5085 | 4.260743 | CGTCTGAAAAGTCTGCAACATGAA | 60.261 | 41.667 | 0.00 | 0.00 | 0.00 | 2.57 |
3854 | 5086 | 4.972440 | GTCTGAAAAGTCTGCAACATGAAC | 59.028 | 41.667 | 0.00 | 0.00 | 0.00 | 3.18 |
3855 | 5087 | 3.951306 | TGAAAAGTCTGCAACATGAACG | 58.049 | 40.909 | 0.00 | 0.00 | 0.00 | 3.95 |
3856 | 5088 | 3.376859 | TGAAAAGTCTGCAACATGAACGT | 59.623 | 39.130 | 0.00 | 0.00 | 0.00 | 3.99 |
3857 | 5089 | 4.142491 | TGAAAAGTCTGCAACATGAACGTT | 60.142 | 37.500 | 0.00 | 0.00 | 0.00 | 3.99 |
3863 | 5095 | 2.800096 | CAACATGAACGTTGCAGCC | 58.200 | 52.632 | 5.00 | 0.00 | 39.82 | 4.85 |
3864 | 5096 | 0.664166 | CAACATGAACGTTGCAGCCC | 60.664 | 55.000 | 5.00 | 0.00 | 39.82 | 5.19 |
3865 | 5097 | 2.128853 | AACATGAACGTTGCAGCCCG | 62.129 | 55.000 | 5.00 | 0.00 | 0.00 | 6.13 |
3866 | 5098 | 2.031919 | ATGAACGTTGCAGCCCGA | 59.968 | 55.556 | 5.00 | 0.00 | 0.00 | 5.14 |
3867 | 5099 | 1.599518 | ATGAACGTTGCAGCCCGAA | 60.600 | 52.632 | 5.00 | 0.00 | 0.00 | 4.30 |
3868 | 5100 | 1.169661 | ATGAACGTTGCAGCCCGAAA | 61.170 | 50.000 | 5.00 | 0.00 | 0.00 | 3.46 |
3869 | 5101 | 1.357334 | GAACGTTGCAGCCCGAAAA | 59.643 | 52.632 | 5.00 | 0.00 | 0.00 | 2.29 |
3870 | 5102 | 0.933047 | GAACGTTGCAGCCCGAAAAC | 60.933 | 55.000 | 5.00 | 0.00 | 0.00 | 2.43 |
3871 | 5103 | 2.426752 | CGTTGCAGCCCGAAAACG | 60.427 | 61.111 | 1.06 | 1.06 | 39.35 | 3.60 |
3872 | 5104 | 2.050442 | GTTGCAGCCCGAAAACGG | 60.050 | 61.111 | 0.00 | 0.00 | 0.00 | 4.44 |
3879 | 5111 | 2.281208 | CCCGAAAACGGGTCAGCA | 60.281 | 61.111 | 18.03 | 0.00 | 43.90 | 4.41 |
3880 | 5112 | 2.613506 | CCCGAAAACGGGTCAGCAC | 61.614 | 63.158 | 18.03 | 0.00 | 43.90 | 4.40 |
3881 | 5113 | 1.890041 | CCGAAAACGGGTCAGCACA | 60.890 | 57.895 | 0.00 | 0.00 | 0.00 | 4.57 |
3882 | 5114 | 1.234615 | CCGAAAACGGGTCAGCACAT | 61.235 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
3883 | 5115 | 0.110238 | CGAAAACGGGTCAGCACATG | 60.110 | 55.000 | 0.00 | 0.00 | 0.00 | 3.21 |
3884 | 5116 | 0.240945 | GAAAACGGGTCAGCACATGG | 59.759 | 55.000 | 0.00 | 0.00 | 0.00 | 3.66 |
3885 | 5117 | 0.179004 | AAAACGGGTCAGCACATGGA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.41 |
3886 | 5118 | 0.179004 | AAACGGGTCAGCACATGGAA | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3887 | 5119 | 0.038166 | AACGGGTCAGCACATGGAAT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 3.01 |
3888 | 5120 | 0.908910 | ACGGGTCAGCACATGGAATA | 59.091 | 50.000 | 0.00 | 0.00 | 0.00 | 1.75 |
3889 | 5121 | 1.490490 | ACGGGTCAGCACATGGAATAT | 59.510 | 47.619 | 0.00 | 0.00 | 0.00 | 1.28 |
3890 | 5122 | 1.875514 | CGGGTCAGCACATGGAATATG | 59.124 | 52.381 | 0.00 | 0.00 | 0.00 | 1.78 |
3891 | 5123 | 1.610522 | GGGTCAGCACATGGAATATGC | 59.389 | 52.381 | 0.00 | 0.00 | 39.74 | 3.14 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
14 | 15 | 5.652994 | TGTTTATTTGAATACCAGCACCC | 57.347 | 39.130 | 0.00 | 0.00 | 0.00 | 4.61 |
263 | 264 | 8.827177 | AGACAAATGTAAGACAAGTAATTCGA | 57.173 | 30.769 | 0.00 | 0.00 | 0.00 | 3.71 |
349 | 355 | 3.447950 | AGTACCTCCGTCCCAAATTACT | 58.552 | 45.455 | 0.00 | 0.00 | 0.00 | 2.24 |
458 | 464 | 4.263435 | TGGTTTACCCTAATGCTAAACCG | 58.737 | 43.478 | 13.66 | 0.00 | 46.81 | 4.44 |
460 | 466 | 6.578163 | TGTTGGTTTACCCTAATGCTAAAC | 57.422 | 37.500 | 0.00 | 0.00 | 34.29 | 2.01 |
487 | 493 | 7.382759 | TCGGTGCCTTTATAATTCAAAACAAAC | 59.617 | 33.333 | 0.00 | 0.00 | 0.00 | 2.93 |
609 | 615 | 5.988561 | GGGTCATAAAAATTGCACACAAAGA | 59.011 | 36.000 | 0.00 | 0.00 | 39.77 | 2.52 |
616 | 622 | 8.546597 | ACATTAAAGGGTCATAAAAATTGCAC | 57.453 | 30.769 | 0.00 | 0.00 | 0.00 | 4.57 |
728 | 734 | 5.627182 | AAGTGATGATCCTGCTGATTAGT | 57.373 | 39.130 | 0.00 | 0.00 | 32.41 | 2.24 |
749 | 756 | 2.426738 | CACAGTTCAGGCCAAACAGAAA | 59.573 | 45.455 | 19.60 | 0.00 | 0.00 | 2.52 |
1058 | 1065 | 2.497675 | TGGACTGAGCTCTGGTAATGAC | 59.502 | 50.000 | 22.75 | 6.55 | 0.00 | 3.06 |
1071 | 1078 | 3.519579 | CTGAGCAGTATGTTGGACTGAG | 58.480 | 50.000 | 6.96 | 0.00 | 46.01 | 3.35 |
1100 | 1107 | 4.002982 | TGATGTGGAATCAAGTGTAGTGC | 58.997 | 43.478 | 0.00 | 0.00 | 0.00 | 4.40 |
1290 | 1297 | 1.086634 | CAGCCTCCTTTAGCGAGCAC | 61.087 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
1591 | 1598 | 6.348295 | GCTTCAGACGCATATGATGATGAAAT | 60.348 | 38.462 | 6.97 | 0.00 | 0.00 | 2.17 |
1629 | 1636 | 3.877508 | GTCTGGGTATCTTCGAAAATGGG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.00 |
1693 | 1700 | 0.873054 | CTCTTCACACTTGCTGGCAG | 59.127 | 55.000 | 10.94 | 10.94 | 0.00 | 4.85 |
1911 | 1918 | 2.519541 | TCGCATCTCCTCCCTCCG | 60.520 | 66.667 | 0.00 | 0.00 | 0.00 | 4.63 |
1926 | 1933 | 5.389935 | GCTCTTTGTACATCCAAGAAACTCG | 60.390 | 44.000 | 9.23 | 0.66 | 0.00 | 4.18 |
2082 | 2089 | 0.882042 | CGCTCTTGGTGCACTTGTCT | 60.882 | 55.000 | 17.98 | 0.00 | 0.00 | 3.41 |
2154 | 2161 | 3.007182 | CACCCTTTGCACATTCTGGAAAT | 59.993 | 43.478 | 0.00 | 0.00 | 39.27 | 2.17 |
2304 | 2311 | 0.182775 | ACACTCCACCACCCTCAAAC | 59.817 | 55.000 | 0.00 | 0.00 | 0.00 | 2.93 |
2328 | 2335 | 4.170062 | CCGCCATGCACGCTCTTG | 62.170 | 66.667 | 6.09 | 0.00 | 0.00 | 3.02 |
2403 | 2410 | 1.142748 | CCGCCCTCTAGCACTCTTG | 59.857 | 63.158 | 0.00 | 0.00 | 0.00 | 3.02 |
2868 | 2875 | 0.612744 | TCCACGCCATCATGACAGAA | 59.387 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
2961 | 2968 | 5.511202 | GGACAACAATTGGTGAAATGTGGAT | 60.511 | 40.000 | 29.74 | 3.68 | 35.97 | 3.41 |
2990 | 3008 | 2.027561 | TGTCCCCTATCACTTCCAAACG | 60.028 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
3002 | 3020 | 4.016479 | ACACGGAGGATATATGTCCCCTAT | 60.016 | 45.833 | 14.45 | 4.87 | 39.17 | 2.57 |
3005 | 3023 | 2.537143 | ACACGGAGGATATATGTCCCC | 58.463 | 52.381 | 14.45 | 13.60 | 39.17 | 4.81 |
3006 | 3024 | 4.597004 | TCTACACGGAGGATATATGTCCC | 58.403 | 47.826 | 14.45 | 6.65 | 39.17 | 4.46 |
3077 | 3095 | 5.885912 | AGGGCAGTTTGACGACATTAATAAT | 59.114 | 36.000 | 0.00 | 0.00 | 0.00 | 1.28 |
3078 | 3096 | 5.250200 | AGGGCAGTTTGACGACATTAATAA | 58.750 | 37.500 | 0.00 | 0.00 | 0.00 | 1.40 |
3079 | 3097 | 4.839121 | AGGGCAGTTTGACGACATTAATA | 58.161 | 39.130 | 0.00 | 0.00 | 0.00 | 0.98 |
3122 | 3140 | 9.301897 | TGTGAAGCAGTATCAGACTACATATAT | 57.698 | 33.333 | 0.00 | 0.00 | 35.64 | 0.86 |
3124 | 3142 | 7.588497 | TGTGAAGCAGTATCAGACTACATAT | 57.412 | 36.000 | 0.00 | 0.00 | 35.64 | 1.78 |
3126 | 3144 | 5.921962 | TGTGAAGCAGTATCAGACTACAT | 57.078 | 39.130 | 0.00 | 0.00 | 35.64 | 2.29 |
3128 | 3146 | 6.256757 | GGAAATGTGAAGCAGTATCAGACTAC | 59.743 | 42.308 | 0.00 | 0.00 | 35.64 | 2.73 |
3129 | 3147 | 6.155221 | AGGAAATGTGAAGCAGTATCAGACTA | 59.845 | 38.462 | 0.00 | 0.00 | 35.64 | 2.59 |
3130 | 3148 | 5.046014 | AGGAAATGTGAAGCAGTATCAGACT | 60.046 | 40.000 | 0.00 | 0.00 | 39.82 | 3.24 |
3131 | 3149 | 5.181748 | AGGAAATGTGAAGCAGTATCAGAC | 58.818 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3176 | 3194 | 3.694566 | AGAAACACGAAGGAAAGCAAACT | 59.305 | 39.130 | 0.00 | 0.00 | 0.00 | 2.66 |
3190 | 3208 | 3.181520 | GCTGCACTATTACCAGAAACACG | 60.182 | 47.826 | 0.00 | 0.00 | 0.00 | 4.49 |
3232 | 3259 | 1.363744 | AGACGACGTACTTCTACCCG | 58.636 | 55.000 | 0.00 | 0.00 | 0.00 | 5.28 |
3243 | 3270 | 2.876550 | TCATCCGATCAATAGACGACGT | 59.123 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
3244 | 3271 | 3.483734 | CTCATCCGATCAATAGACGACG | 58.516 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 |
3248 | 3275 | 4.608948 | AACCCTCATCCGATCAATAGAC | 57.391 | 45.455 | 0.00 | 0.00 | 0.00 | 2.59 |
3250 | 3277 | 6.372659 | CCAAATAACCCTCATCCGATCAATAG | 59.627 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
3339 | 3366 | 3.165890 | GACATGTGCATCAACGTTCATG | 58.834 | 45.455 | 18.53 | 18.53 | 38.65 | 3.07 |
3345 | 3379 | 1.915350 | GCAATGACATGTGCATCAACG | 59.085 | 47.619 | 1.15 | 0.00 | 40.58 | 4.10 |
3355 | 3389 | 7.928167 | TGGTATAGAGTTTCTAGCAATGACATG | 59.072 | 37.037 | 0.00 | 0.00 | 31.67 | 3.21 |
3358 | 3393 | 7.224949 | GGTTGGTATAGAGTTTCTAGCAATGAC | 59.775 | 40.741 | 0.00 | 0.00 | 35.88 | 3.06 |
3376 | 3411 | 3.375699 | TGGTTGGTGTTTTGGTTGGTAT | 58.624 | 40.909 | 0.00 | 0.00 | 0.00 | 2.73 |
3379 | 3414 | 2.770164 | TTGGTTGGTGTTTTGGTTGG | 57.230 | 45.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3380 | 3415 | 3.931578 | TCTTTGGTTGGTGTTTTGGTTG | 58.068 | 40.909 | 0.00 | 0.00 | 0.00 | 3.77 |
3381 | 3416 | 3.835395 | TCTCTTTGGTTGGTGTTTTGGTT | 59.165 | 39.130 | 0.00 | 0.00 | 0.00 | 3.67 |
3382 | 3417 | 3.194755 | GTCTCTTTGGTTGGTGTTTTGGT | 59.805 | 43.478 | 0.00 | 0.00 | 0.00 | 3.67 |
3383 | 3418 | 3.430236 | GGTCTCTTTGGTTGGTGTTTTGG | 60.430 | 47.826 | 0.00 | 0.00 | 0.00 | 3.28 |
3384 | 3419 | 3.430236 | GGGTCTCTTTGGTTGGTGTTTTG | 60.430 | 47.826 | 0.00 | 0.00 | 0.00 | 2.44 |
3385 | 3420 | 2.764010 | GGGTCTCTTTGGTTGGTGTTTT | 59.236 | 45.455 | 0.00 | 0.00 | 0.00 | 2.43 |
3386 | 3421 | 2.024369 | AGGGTCTCTTTGGTTGGTGTTT | 60.024 | 45.455 | 0.00 | 0.00 | 0.00 | 2.83 |
3388 | 3423 | 1.133792 | CAGGGTCTCTTTGGTTGGTGT | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 4.16 |
3391 | 3426 | 0.251341 | CCCAGGGTCTCTTTGGTTGG | 60.251 | 60.000 | 0.00 | 0.00 | 0.00 | 3.77 |
3392 | 3427 | 0.771127 | TCCCAGGGTCTCTTTGGTTG | 59.229 | 55.000 | 5.01 | 0.00 | 0.00 | 3.77 |
3396 | 3431 | 2.573462 | TCAGATTCCCAGGGTCTCTTTG | 59.427 | 50.000 | 5.01 | 0.00 | 0.00 | 2.77 |
3397 | 3432 | 2.573915 | GTCAGATTCCCAGGGTCTCTTT | 59.426 | 50.000 | 5.01 | 0.00 | 0.00 | 2.52 |
3398 | 3433 | 2.192263 | GTCAGATTCCCAGGGTCTCTT | 58.808 | 52.381 | 5.01 | 0.00 | 0.00 | 2.85 |
3400 | 3435 | 1.872773 | AGTCAGATTCCCAGGGTCTC | 58.127 | 55.000 | 5.01 | 3.59 | 0.00 | 3.36 |
3401 | 3436 | 2.192263 | GAAGTCAGATTCCCAGGGTCT | 58.808 | 52.381 | 5.01 | 0.00 | 0.00 | 3.85 |
3422 | 4643 | 1.132657 | TCTGGAGGAAACCACCACCTA | 60.133 | 52.381 | 3.01 | 0.00 | 40.49 | 3.08 |
3464 | 4685 | 0.031994 | AGGTTGCGTTTGACATTGGC | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.52 |
3468 | 4689 | 1.808411 | ATCGAGGTTGCGTTTGACAT | 58.192 | 45.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3482 | 4714 | 1.734465 | GGAAGAACCAGTGCAATCGAG | 59.266 | 52.381 | 0.00 | 0.00 | 38.79 | 4.04 |
3483 | 4715 | 1.347707 | AGGAAGAACCAGTGCAATCGA | 59.652 | 47.619 | 0.00 | 0.00 | 42.04 | 3.59 |
3484 | 4716 | 1.813513 | AGGAAGAACCAGTGCAATCG | 58.186 | 50.000 | 0.00 | 0.00 | 42.04 | 3.34 |
3485 | 4717 | 4.082733 | GGTTAAGGAAGAACCAGTGCAATC | 60.083 | 45.833 | 0.00 | 0.00 | 44.92 | 2.67 |
3486 | 4718 | 3.826729 | GGTTAAGGAAGAACCAGTGCAAT | 59.173 | 43.478 | 0.00 | 0.00 | 44.92 | 3.56 |
3487 | 4719 | 3.219281 | GGTTAAGGAAGAACCAGTGCAA | 58.781 | 45.455 | 0.00 | 0.00 | 44.92 | 4.08 |
3488 | 4720 | 2.858745 | GGTTAAGGAAGAACCAGTGCA | 58.141 | 47.619 | 0.00 | 0.00 | 44.92 | 4.57 |
3510 | 4742 | 2.540361 | GGAGATCATTCATGTTGCGTGC | 60.540 | 50.000 | 0.00 | 0.00 | 0.00 | 5.34 |
3529 | 4761 | 4.634012 | TCATCTCCTTTTCCTTTTCGGA | 57.366 | 40.909 | 0.00 | 0.00 | 41.06 | 4.55 |
3576 | 4808 | 4.698575 | TGGTCGCTACATGTGCATATTAA | 58.301 | 39.130 | 9.11 | 0.00 | 0.00 | 1.40 |
3577 | 4809 | 4.038642 | TCTGGTCGCTACATGTGCATATTA | 59.961 | 41.667 | 9.11 | 0.00 | 0.00 | 0.98 |
3578 | 4810 | 3.133691 | CTGGTCGCTACATGTGCATATT | 58.866 | 45.455 | 9.11 | 0.00 | 0.00 | 1.28 |
3579 | 4811 | 2.365293 | TCTGGTCGCTACATGTGCATAT | 59.635 | 45.455 | 9.11 | 0.00 | 0.00 | 1.78 |
3580 | 4812 | 1.754226 | TCTGGTCGCTACATGTGCATA | 59.246 | 47.619 | 9.11 | 0.00 | 0.00 | 3.14 |
3581 | 4813 | 0.536724 | TCTGGTCGCTACATGTGCAT | 59.463 | 50.000 | 9.11 | 0.00 | 0.00 | 3.96 |
3582 | 4814 | 0.536724 | ATCTGGTCGCTACATGTGCA | 59.463 | 50.000 | 9.11 | 0.00 | 0.00 | 4.57 |
3583 | 4815 | 1.202463 | AGATCTGGTCGCTACATGTGC | 60.202 | 52.381 | 9.11 | 9.29 | 0.00 | 4.57 |
3584 | 4816 | 2.099756 | TGAGATCTGGTCGCTACATGTG | 59.900 | 50.000 | 9.11 | 0.00 | 0.00 | 3.21 |
3585 | 4817 | 2.360483 | CTGAGATCTGGTCGCTACATGT | 59.640 | 50.000 | 0.00 | 2.69 | 0.00 | 3.21 |
3586 | 4818 | 2.620585 | TCTGAGATCTGGTCGCTACATG | 59.379 | 50.000 | 0.00 | 0.00 | 0.00 | 3.21 |
3587 | 4819 | 2.621055 | GTCTGAGATCTGGTCGCTACAT | 59.379 | 50.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3588 | 4820 | 2.017782 | GTCTGAGATCTGGTCGCTACA | 58.982 | 52.381 | 0.00 | 0.00 | 0.00 | 2.74 |
3589 | 4821 | 2.017782 | TGTCTGAGATCTGGTCGCTAC | 58.982 | 52.381 | 0.00 | 0.00 | 0.00 | 3.58 |
3590 | 4822 | 2.293170 | CTGTCTGAGATCTGGTCGCTA | 58.707 | 52.381 | 0.00 | 0.00 | 0.00 | 4.26 |
3591 | 4823 | 1.102154 | CTGTCTGAGATCTGGTCGCT | 58.898 | 55.000 | 0.00 | 0.00 | 0.00 | 4.93 |
3592 | 4824 | 0.102120 | CCTGTCTGAGATCTGGTCGC | 59.898 | 60.000 | 0.00 | 0.00 | 0.00 | 5.19 |
3593 | 4825 | 0.743688 | CCCTGTCTGAGATCTGGTCG | 59.256 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
3594 | 4826 | 2.151502 | TCCCTGTCTGAGATCTGGTC | 57.848 | 55.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3595 | 4827 | 2.676748 | GATCCCTGTCTGAGATCTGGT | 58.323 | 52.381 | 0.00 | 0.00 | 34.78 | 4.00 |
3596 | 4828 | 1.612950 | CGATCCCTGTCTGAGATCTGG | 59.387 | 57.143 | 0.00 | 0.00 | 35.34 | 3.86 |
3597 | 4829 | 1.612950 | CCGATCCCTGTCTGAGATCTG | 59.387 | 57.143 | 0.00 | 0.00 | 35.34 | 2.90 |
3598 | 4830 | 1.216678 | ACCGATCCCTGTCTGAGATCT | 59.783 | 52.381 | 0.00 | 0.00 | 35.34 | 2.75 |
3599 | 4831 | 1.698506 | ACCGATCCCTGTCTGAGATC | 58.301 | 55.000 | 0.00 | 0.00 | 34.37 | 2.75 |
3600 | 4832 | 3.314307 | TTACCGATCCCTGTCTGAGAT | 57.686 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
3601 | 4833 | 2.820728 | TTACCGATCCCTGTCTGAGA | 57.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.27 |
3602 | 4834 | 2.546795 | GCATTACCGATCCCTGTCTGAG | 60.547 | 54.545 | 0.00 | 0.00 | 0.00 | 3.35 |
3603 | 4835 | 1.412710 | GCATTACCGATCCCTGTCTGA | 59.587 | 52.381 | 0.00 | 0.00 | 0.00 | 3.27 |
3604 | 4836 | 1.414181 | AGCATTACCGATCCCTGTCTG | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3605 | 4837 | 1.414181 | CAGCATTACCGATCCCTGTCT | 59.586 | 52.381 | 0.00 | 0.00 | 0.00 | 3.41 |
3606 | 4838 | 1.412710 | TCAGCATTACCGATCCCTGTC | 59.587 | 52.381 | 0.00 | 0.00 | 0.00 | 3.51 |
3607 | 4839 | 1.496060 | TCAGCATTACCGATCCCTGT | 58.504 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3608 | 4840 | 2.847327 | ATCAGCATTACCGATCCCTG | 57.153 | 50.000 | 0.00 | 0.00 | 0.00 | 4.45 |
3609 | 4841 | 2.231478 | CGTATCAGCATTACCGATCCCT | 59.769 | 50.000 | 0.00 | 0.00 | 0.00 | 4.20 |
3610 | 4842 | 2.607187 | CGTATCAGCATTACCGATCCC | 58.393 | 52.381 | 0.00 | 0.00 | 0.00 | 3.85 |
3611 | 4843 | 1.993370 | GCGTATCAGCATTACCGATCC | 59.007 | 52.381 | 0.00 | 0.00 | 37.05 | 3.36 |
3612 | 4844 | 1.649171 | CGCGTATCAGCATTACCGATC | 59.351 | 52.381 | 0.00 | 0.00 | 36.85 | 3.69 |
3613 | 4845 | 1.698165 | CGCGTATCAGCATTACCGAT | 58.302 | 50.000 | 0.00 | 0.00 | 36.85 | 4.18 |
3614 | 4846 | 0.937699 | GCGCGTATCAGCATTACCGA | 60.938 | 55.000 | 8.43 | 0.00 | 36.85 | 4.69 |
3615 | 4847 | 1.212455 | TGCGCGTATCAGCATTACCG | 61.212 | 55.000 | 8.43 | 0.00 | 38.59 | 4.02 |
3616 | 4848 | 0.508641 | CTGCGCGTATCAGCATTACC | 59.491 | 55.000 | 8.43 | 0.00 | 42.95 | 2.85 |
3617 | 4849 | 1.209128 | ACTGCGCGTATCAGCATTAC | 58.791 | 50.000 | 8.43 | 0.00 | 42.95 | 1.89 |
3618 | 4850 | 2.034179 | AGTACTGCGCGTATCAGCATTA | 59.966 | 45.455 | 8.43 | 0.00 | 42.95 | 1.90 |
3619 | 4851 | 1.202417 | AGTACTGCGCGTATCAGCATT | 60.202 | 47.619 | 8.43 | 0.00 | 42.95 | 3.56 |
3620 | 4852 | 0.385751 | AGTACTGCGCGTATCAGCAT | 59.614 | 50.000 | 8.43 | 0.00 | 42.95 | 3.79 |
3621 | 4853 | 0.172578 | AAGTACTGCGCGTATCAGCA | 59.827 | 50.000 | 8.43 | 0.00 | 41.55 | 4.41 |
3622 | 4854 | 0.572590 | CAAGTACTGCGCGTATCAGC | 59.427 | 55.000 | 8.43 | 0.00 | 35.04 | 4.26 |
3623 | 4855 | 2.188837 | TCAAGTACTGCGCGTATCAG | 57.811 | 50.000 | 8.43 | 9.49 | 37.56 | 2.90 |
3624 | 4856 | 2.162809 | TCTTCAAGTACTGCGCGTATCA | 59.837 | 45.455 | 8.43 | 0.00 | 0.00 | 2.15 |
3625 | 4857 | 2.793933 | TCTTCAAGTACTGCGCGTATC | 58.206 | 47.619 | 8.43 | 8.71 | 0.00 | 2.24 |
3626 | 4858 | 2.933495 | TCTTCAAGTACTGCGCGTAT | 57.067 | 45.000 | 8.43 | 0.00 | 0.00 | 3.06 |
3627 | 4859 | 2.710220 | TTCTTCAAGTACTGCGCGTA | 57.290 | 45.000 | 8.43 | 0.71 | 0.00 | 4.42 |
3628 | 4860 | 2.080286 | ATTCTTCAAGTACTGCGCGT | 57.920 | 45.000 | 8.43 | 6.51 | 0.00 | 6.01 |
3629 | 4861 | 3.455619 | AAATTCTTCAAGTACTGCGCG | 57.544 | 42.857 | 0.00 | 0.00 | 0.00 | 6.86 |
3630 | 4862 | 9.798885 | CTATTATAAATTCTTCAAGTACTGCGC | 57.201 | 33.333 | 0.00 | 0.00 | 0.00 | 6.09 |
3653 | 4885 | 9.751542 | GTAATAAGTGTGTGATTGCTACTCTAT | 57.248 | 33.333 | 0.00 | 0.00 | 0.00 | 1.98 |
3654 | 4886 | 8.745590 | TGTAATAAGTGTGTGATTGCTACTCTA | 58.254 | 33.333 | 0.00 | 0.00 | 0.00 | 2.43 |
3655 | 4887 | 7.611770 | TGTAATAAGTGTGTGATTGCTACTCT | 58.388 | 34.615 | 0.00 | 0.00 | 0.00 | 3.24 |
3656 | 4888 | 7.827819 | TGTAATAAGTGTGTGATTGCTACTC | 57.172 | 36.000 | 0.00 | 0.00 | 0.00 | 2.59 |
3657 | 4889 | 8.668353 | CAATGTAATAAGTGTGTGATTGCTACT | 58.332 | 33.333 | 0.00 | 0.00 | 0.00 | 2.57 |
3658 | 4890 | 8.664798 | TCAATGTAATAAGTGTGTGATTGCTAC | 58.335 | 33.333 | 0.00 | 0.00 | 0.00 | 3.58 |
3659 | 4891 | 8.785329 | TCAATGTAATAAGTGTGTGATTGCTA | 57.215 | 30.769 | 0.00 | 0.00 | 0.00 | 3.49 |
3660 | 4892 | 7.686438 | TCAATGTAATAAGTGTGTGATTGCT | 57.314 | 32.000 | 0.00 | 0.00 | 0.00 | 3.91 |
3661 | 4893 | 8.800972 | CATTCAATGTAATAAGTGTGTGATTGC | 58.199 | 33.333 | 0.00 | 0.00 | 0.00 | 3.56 |
3662 | 4894 | 9.844790 | ACATTCAATGTAATAAGTGTGTGATTG | 57.155 | 29.630 | 0.00 | 0.00 | 42.78 | 2.67 |
3664 | 4896 | 9.453572 | AGACATTCAATGTAATAAGTGTGTGAT | 57.546 | 29.630 | 2.04 | 0.00 | 45.03 | 3.06 |
3665 | 4897 | 8.846943 | AGACATTCAATGTAATAAGTGTGTGA | 57.153 | 30.769 | 2.04 | 0.00 | 45.03 | 3.58 |
3666 | 4898 | 8.720562 | TGAGACATTCAATGTAATAAGTGTGTG | 58.279 | 33.333 | 2.04 | 0.00 | 45.03 | 3.82 |
3667 | 4899 | 8.846943 | TGAGACATTCAATGTAATAAGTGTGT | 57.153 | 30.769 | 2.04 | 0.00 | 45.03 | 3.72 |
3719 | 4951 | 7.386848 | TGTTATCGTTATTAGATGGCCTTAAGC | 59.613 | 37.037 | 3.32 | 0.00 | 42.60 | 3.09 |
3720 | 4952 | 8.827177 | TGTTATCGTTATTAGATGGCCTTAAG | 57.173 | 34.615 | 3.32 | 0.00 | 0.00 | 1.85 |
3721 | 4953 | 7.386848 | GCTGTTATCGTTATTAGATGGCCTTAA | 59.613 | 37.037 | 3.32 | 0.49 | 0.00 | 1.85 |
3722 | 4954 | 6.872020 | GCTGTTATCGTTATTAGATGGCCTTA | 59.128 | 38.462 | 3.32 | 0.00 | 0.00 | 2.69 |
3723 | 4955 | 5.701290 | GCTGTTATCGTTATTAGATGGCCTT | 59.299 | 40.000 | 3.32 | 0.00 | 0.00 | 4.35 |
3724 | 4956 | 5.238583 | GCTGTTATCGTTATTAGATGGCCT | 58.761 | 41.667 | 3.32 | 0.00 | 0.00 | 5.19 |
3725 | 4957 | 4.091509 | CGCTGTTATCGTTATTAGATGGCC | 59.908 | 45.833 | 0.00 | 0.00 | 0.00 | 5.36 |
3726 | 4958 | 4.091509 | CCGCTGTTATCGTTATTAGATGGC | 59.908 | 45.833 | 0.00 | 0.00 | 0.00 | 4.40 |
3727 | 4959 | 5.466819 | TCCGCTGTTATCGTTATTAGATGG | 58.533 | 41.667 | 0.00 | 0.00 | 0.00 | 3.51 |
3728 | 4960 | 7.402811 | TTTCCGCTGTTATCGTTATTAGATG | 57.597 | 36.000 | 0.00 | 0.00 | 0.00 | 2.90 |
3729 | 4961 | 6.145696 | GCTTTCCGCTGTTATCGTTATTAGAT | 59.854 | 38.462 | 0.00 | 0.00 | 35.14 | 1.98 |
3730 | 4962 | 5.461078 | GCTTTCCGCTGTTATCGTTATTAGA | 59.539 | 40.000 | 0.00 | 0.00 | 35.14 | 2.10 |
3731 | 4963 | 5.667175 | GCTTTCCGCTGTTATCGTTATTAG | 58.333 | 41.667 | 0.00 | 0.00 | 35.14 | 1.73 |
3732 | 4964 | 5.646467 | GCTTTCCGCTGTTATCGTTATTA | 57.354 | 39.130 | 0.00 | 0.00 | 35.14 | 0.98 |
3733 | 4965 | 4.531659 | GCTTTCCGCTGTTATCGTTATT | 57.468 | 40.909 | 0.00 | 0.00 | 35.14 | 1.40 |
3746 | 4978 | 3.010420 | ACTTATCTTCCAAGCTTTCCGC | 58.990 | 45.455 | 0.00 | 0.00 | 39.57 | 5.54 |
3747 | 4979 | 4.253685 | TCACTTATCTTCCAAGCTTTCCG | 58.746 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
3748 | 4980 | 5.249420 | ACTCACTTATCTTCCAAGCTTTCC | 58.751 | 41.667 | 0.00 | 0.00 | 0.00 | 3.13 |
3749 | 4981 | 5.352846 | GGACTCACTTATCTTCCAAGCTTTC | 59.647 | 44.000 | 0.00 | 0.00 | 0.00 | 2.62 |
3750 | 4982 | 5.221925 | TGGACTCACTTATCTTCCAAGCTTT | 60.222 | 40.000 | 0.00 | 0.00 | 33.31 | 3.51 |
3751 | 4983 | 4.287067 | TGGACTCACTTATCTTCCAAGCTT | 59.713 | 41.667 | 0.00 | 0.00 | 33.31 | 3.74 |
3752 | 4984 | 3.840666 | TGGACTCACTTATCTTCCAAGCT | 59.159 | 43.478 | 0.00 | 0.00 | 33.31 | 3.74 |
3753 | 4985 | 4.207891 | TGGACTCACTTATCTTCCAAGC | 57.792 | 45.455 | 0.00 | 0.00 | 33.31 | 4.01 |
3754 | 4986 | 5.982356 | TGATGGACTCACTTATCTTCCAAG | 58.018 | 41.667 | 0.00 | 0.00 | 39.77 | 3.61 |
3755 | 4987 | 6.013379 | AGTTGATGGACTCACTTATCTTCCAA | 60.013 | 38.462 | 0.00 | 0.00 | 39.77 | 3.53 |
3756 | 4988 | 5.485353 | AGTTGATGGACTCACTTATCTTCCA | 59.515 | 40.000 | 0.00 | 0.00 | 40.61 | 3.53 |
3757 | 4989 | 5.983540 | AGTTGATGGACTCACTTATCTTCC | 58.016 | 41.667 | 0.00 | 0.00 | 32.17 | 3.46 |
3758 | 4990 | 6.045955 | GGAGTTGATGGACTCACTTATCTTC | 58.954 | 44.000 | 7.27 | 0.00 | 46.21 | 2.87 |
3759 | 4991 | 5.485353 | TGGAGTTGATGGACTCACTTATCTT | 59.515 | 40.000 | 7.27 | 0.00 | 46.21 | 2.40 |
3760 | 4992 | 5.026121 | TGGAGTTGATGGACTCACTTATCT | 58.974 | 41.667 | 7.27 | 0.00 | 46.21 | 1.98 |
3761 | 4993 | 5.344743 | TGGAGTTGATGGACTCACTTATC | 57.655 | 43.478 | 7.27 | 0.00 | 46.21 | 1.75 |
3762 | 4994 | 5.491982 | GTTGGAGTTGATGGACTCACTTAT | 58.508 | 41.667 | 7.27 | 0.00 | 46.21 | 1.73 |
3763 | 4995 | 4.560716 | CGTTGGAGTTGATGGACTCACTTA | 60.561 | 45.833 | 7.27 | 0.00 | 46.21 | 2.24 |
3764 | 4996 | 3.744660 | GTTGGAGTTGATGGACTCACTT | 58.255 | 45.455 | 7.27 | 0.00 | 46.21 | 3.16 |
3765 | 4997 | 2.289072 | CGTTGGAGTTGATGGACTCACT | 60.289 | 50.000 | 7.27 | 0.00 | 46.21 | 3.41 |
3766 | 4998 | 2.069273 | CGTTGGAGTTGATGGACTCAC | 58.931 | 52.381 | 7.27 | 0.00 | 46.21 | 3.51 |
3767 | 4999 | 1.967779 | TCGTTGGAGTTGATGGACTCA | 59.032 | 47.619 | 7.27 | 0.00 | 46.21 | 3.41 |
3768 | 5000 | 2.288825 | TGTCGTTGGAGTTGATGGACTC | 60.289 | 50.000 | 0.00 | 0.00 | 44.20 | 3.36 |
3769 | 5001 | 1.691976 | TGTCGTTGGAGTTGATGGACT | 59.308 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
3770 | 5002 | 2.163818 | TGTCGTTGGAGTTGATGGAC | 57.836 | 50.000 | 0.00 | 0.00 | 0.00 | 4.02 |
3771 | 5003 | 2.301583 | TGATGTCGTTGGAGTTGATGGA | 59.698 | 45.455 | 0.00 | 0.00 | 0.00 | 3.41 |
3772 | 5004 | 2.416547 | GTGATGTCGTTGGAGTTGATGG | 59.583 | 50.000 | 0.00 | 0.00 | 0.00 | 3.51 |
3773 | 5005 | 3.124128 | CAGTGATGTCGTTGGAGTTGATG | 59.876 | 47.826 | 0.00 | 0.00 | 0.00 | 3.07 |
3774 | 5006 | 3.006859 | TCAGTGATGTCGTTGGAGTTGAT | 59.993 | 43.478 | 0.00 | 0.00 | 0.00 | 2.57 |
3775 | 5007 | 2.364002 | TCAGTGATGTCGTTGGAGTTGA | 59.636 | 45.455 | 0.00 | 0.00 | 0.00 | 3.18 |
3776 | 5008 | 2.733552 | CTCAGTGATGTCGTTGGAGTTG | 59.266 | 50.000 | 0.00 | 0.00 | 0.00 | 3.16 |
3777 | 5009 | 2.365617 | ACTCAGTGATGTCGTTGGAGTT | 59.634 | 45.455 | 0.00 | 0.00 | 30.53 | 3.01 |
3778 | 5010 | 1.964223 | ACTCAGTGATGTCGTTGGAGT | 59.036 | 47.619 | 0.00 | 0.00 | 0.00 | 3.85 |
3779 | 5011 | 2.732412 | ACTCAGTGATGTCGTTGGAG | 57.268 | 50.000 | 0.00 | 0.00 | 0.00 | 3.86 |
3780 | 5012 | 5.650703 | TCTTATACTCAGTGATGTCGTTGGA | 59.349 | 40.000 | 0.00 | 0.00 | 0.00 | 3.53 |
3781 | 5013 | 5.891451 | TCTTATACTCAGTGATGTCGTTGG | 58.109 | 41.667 | 0.00 | 0.00 | 0.00 | 3.77 |
3782 | 5014 | 7.166638 | GTGATCTTATACTCAGTGATGTCGTTG | 59.833 | 40.741 | 0.00 | 0.00 | 0.00 | 4.10 |
3783 | 5015 | 7.197017 | GTGATCTTATACTCAGTGATGTCGTT | 58.803 | 38.462 | 0.00 | 0.00 | 0.00 | 3.85 |
3784 | 5016 | 6.511929 | CGTGATCTTATACTCAGTGATGTCGT | 60.512 | 42.308 | 0.00 | 0.00 | 0.00 | 4.34 |
3785 | 5017 | 5.848559 | CGTGATCTTATACTCAGTGATGTCG | 59.151 | 44.000 | 0.00 | 0.00 | 0.00 | 4.35 |
3786 | 5018 | 6.853872 | GTCGTGATCTTATACTCAGTGATGTC | 59.146 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
3787 | 5019 | 6.238786 | GGTCGTGATCTTATACTCAGTGATGT | 60.239 | 42.308 | 0.00 | 0.00 | 0.00 | 3.06 |
3788 | 5020 | 6.016693 | AGGTCGTGATCTTATACTCAGTGATG | 60.017 | 42.308 | 0.00 | 0.00 | 0.00 | 3.07 |
3789 | 5021 | 6.065374 | AGGTCGTGATCTTATACTCAGTGAT | 58.935 | 40.000 | 0.00 | 0.00 | 0.00 | 3.06 |
3790 | 5022 | 5.437946 | AGGTCGTGATCTTATACTCAGTGA | 58.562 | 41.667 | 0.00 | 0.00 | 0.00 | 3.41 |
3791 | 5023 | 5.759506 | AGGTCGTGATCTTATACTCAGTG | 57.240 | 43.478 | 0.00 | 0.00 | 0.00 | 3.66 |
3792 | 5024 | 7.227116 | GTCTTAGGTCGTGATCTTATACTCAGT | 59.773 | 40.741 | 0.00 | 0.00 | 0.00 | 3.41 |
3793 | 5025 | 7.226918 | TGTCTTAGGTCGTGATCTTATACTCAG | 59.773 | 40.741 | 0.00 | 0.00 | 0.00 | 3.35 |
3794 | 5026 | 7.012138 | GTGTCTTAGGTCGTGATCTTATACTCA | 59.988 | 40.741 | 0.00 | 0.00 | 0.00 | 3.41 |
3795 | 5027 | 7.354257 | GTGTCTTAGGTCGTGATCTTATACTC | 58.646 | 42.308 | 0.00 | 0.00 | 0.00 | 2.59 |
3796 | 5028 | 6.262720 | GGTGTCTTAGGTCGTGATCTTATACT | 59.737 | 42.308 | 0.00 | 0.00 | 0.00 | 2.12 |
3797 | 5029 | 6.262720 | AGGTGTCTTAGGTCGTGATCTTATAC | 59.737 | 42.308 | 0.00 | 0.00 | 0.00 | 1.47 |
3798 | 5030 | 6.363065 | AGGTGTCTTAGGTCGTGATCTTATA | 58.637 | 40.000 | 0.00 | 0.00 | 0.00 | 0.98 |
3799 | 5031 | 5.202004 | AGGTGTCTTAGGTCGTGATCTTAT | 58.798 | 41.667 | 0.00 | 0.00 | 0.00 | 1.73 |
3800 | 5032 | 4.597004 | AGGTGTCTTAGGTCGTGATCTTA | 58.403 | 43.478 | 0.00 | 0.00 | 0.00 | 2.10 |
3801 | 5033 | 3.432378 | AGGTGTCTTAGGTCGTGATCTT | 58.568 | 45.455 | 0.00 | 0.00 | 0.00 | 2.40 |
3802 | 5034 | 3.088789 | AGGTGTCTTAGGTCGTGATCT | 57.911 | 47.619 | 0.00 | 0.00 | 0.00 | 2.75 |
3803 | 5035 | 3.870633 | AAGGTGTCTTAGGTCGTGATC | 57.129 | 47.619 | 0.00 | 0.00 | 0.00 | 2.92 |
3804 | 5036 | 4.342359 | AGTAAGGTGTCTTAGGTCGTGAT | 58.658 | 43.478 | 0.00 | 0.00 | 36.27 | 3.06 |
3805 | 5037 | 3.755378 | GAGTAAGGTGTCTTAGGTCGTGA | 59.245 | 47.826 | 0.00 | 0.00 | 36.27 | 4.35 |
3806 | 5038 | 3.425892 | CGAGTAAGGTGTCTTAGGTCGTG | 60.426 | 52.174 | 0.00 | 0.00 | 37.82 | 4.35 |
3807 | 5039 | 2.746362 | CGAGTAAGGTGTCTTAGGTCGT | 59.254 | 50.000 | 0.00 | 0.00 | 37.82 | 4.34 |
3808 | 5040 | 2.746362 | ACGAGTAAGGTGTCTTAGGTCG | 59.254 | 50.000 | 12.46 | 12.46 | 42.69 | 4.79 |
3809 | 5041 | 3.181512 | CGACGAGTAAGGTGTCTTAGGTC | 60.182 | 52.174 | 0.00 | 0.00 | 36.27 | 3.85 |
3810 | 5042 | 2.746362 | CGACGAGTAAGGTGTCTTAGGT | 59.254 | 50.000 | 0.00 | 0.00 | 36.27 | 3.08 |
3811 | 5043 | 2.746362 | ACGACGAGTAAGGTGTCTTAGG | 59.254 | 50.000 | 0.00 | 0.00 | 36.27 | 2.69 |
3812 | 5044 | 3.683822 | AGACGACGAGTAAGGTGTCTTAG | 59.316 | 47.826 | 0.00 | 0.00 | 36.27 | 2.18 |
3813 | 5045 | 3.434641 | CAGACGACGAGTAAGGTGTCTTA | 59.565 | 47.826 | 0.00 | 0.00 | 34.67 | 2.10 |
3814 | 5046 | 2.225963 | CAGACGACGAGTAAGGTGTCTT | 59.774 | 50.000 | 0.00 | 0.00 | 34.67 | 3.01 |
3815 | 5047 | 1.805345 | CAGACGACGAGTAAGGTGTCT | 59.195 | 52.381 | 0.00 | 0.00 | 37.17 | 3.41 |
3816 | 5048 | 1.802960 | TCAGACGACGAGTAAGGTGTC | 59.197 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
3817 | 5049 | 1.888215 | TCAGACGACGAGTAAGGTGT | 58.112 | 50.000 | 0.00 | 0.00 | 0.00 | 4.16 |
3818 | 5050 | 2.983402 | TTCAGACGACGAGTAAGGTG | 57.017 | 50.000 | 0.00 | 0.00 | 0.00 | 4.00 |
3819 | 5051 | 3.317430 | ACTTTTCAGACGACGAGTAAGGT | 59.683 | 43.478 | 0.00 | 0.00 | 0.00 | 3.50 |
3820 | 5052 | 3.898529 | ACTTTTCAGACGACGAGTAAGG | 58.101 | 45.455 | 0.00 | 0.00 | 0.00 | 2.69 |
3821 | 5053 | 4.613448 | CAGACTTTTCAGACGACGAGTAAG | 59.387 | 45.833 | 0.00 | 0.00 | 0.00 | 2.34 |
3822 | 5054 | 4.534168 | CAGACTTTTCAGACGACGAGTAA | 58.466 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
3823 | 5055 | 3.608707 | GCAGACTTTTCAGACGACGAGTA | 60.609 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
3824 | 5056 | 2.859032 | GCAGACTTTTCAGACGACGAGT | 60.859 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
3825 | 5057 | 1.716581 | GCAGACTTTTCAGACGACGAG | 59.283 | 52.381 | 0.00 | 0.00 | 0.00 | 4.18 |
3826 | 5058 | 1.066454 | TGCAGACTTTTCAGACGACGA | 59.934 | 47.619 | 0.00 | 0.00 | 0.00 | 4.20 |
3827 | 5059 | 1.487482 | TGCAGACTTTTCAGACGACG | 58.513 | 50.000 | 0.00 | 0.00 | 0.00 | 5.12 |
3828 | 5060 | 2.607635 | TGTTGCAGACTTTTCAGACGAC | 59.392 | 45.455 | 0.00 | 0.00 | 0.00 | 4.34 |
3829 | 5061 | 2.899976 | TGTTGCAGACTTTTCAGACGA | 58.100 | 42.857 | 0.00 | 0.00 | 0.00 | 4.20 |
3830 | 5062 | 3.248363 | TCATGTTGCAGACTTTTCAGACG | 59.752 | 43.478 | 0.00 | 0.00 | 0.00 | 4.18 |
3831 | 5063 | 4.818534 | TCATGTTGCAGACTTTTCAGAC | 57.181 | 40.909 | 0.00 | 0.00 | 0.00 | 3.51 |
3832 | 5064 | 4.260743 | CGTTCATGTTGCAGACTTTTCAGA | 60.261 | 41.667 | 0.00 | 0.00 | 0.00 | 3.27 |
3833 | 5065 | 3.970610 | CGTTCATGTTGCAGACTTTTCAG | 59.029 | 43.478 | 0.00 | 0.00 | 0.00 | 3.02 |
3834 | 5066 | 3.376859 | ACGTTCATGTTGCAGACTTTTCA | 59.623 | 39.130 | 0.00 | 0.00 | 0.00 | 2.69 |
3835 | 5067 | 3.952535 | ACGTTCATGTTGCAGACTTTTC | 58.047 | 40.909 | 0.00 | 0.00 | 0.00 | 2.29 |
3836 | 5068 | 4.104776 | CAACGTTCATGTTGCAGACTTTT | 58.895 | 39.130 | 0.00 | 0.00 | 42.34 | 2.27 |
3837 | 5069 | 3.694734 | CAACGTTCATGTTGCAGACTTT | 58.305 | 40.909 | 0.00 | 0.00 | 42.34 | 2.66 |
3838 | 5070 | 3.338818 | CAACGTTCATGTTGCAGACTT | 57.661 | 42.857 | 0.00 | 0.00 | 42.34 | 3.01 |
3846 | 5078 | 1.659794 | GGGCTGCAACGTTCATGTT | 59.340 | 52.632 | 0.00 | 0.00 | 0.00 | 2.71 |
3847 | 5079 | 2.616330 | CGGGCTGCAACGTTCATGT | 61.616 | 57.895 | 0.00 | 0.00 | 0.00 | 3.21 |
3848 | 5080 | 1.851021 | TTCGGGCTGCAACGTTCATG | 61.851 | 55.000 | 14.05 | 0.00 | 0.00 | 3.07 |
3849 | 5081 | 1.169661 | TTTCGGGCTGCAACGTTCAT | 61.170 | 50.000 | 14.05 | 0.00 | 0.00 | 2.57 |
3850 | 5082 | 1.377366 | TTTTCGGGCTGCAACGTTCA | 61.377 | 50.000 | 14.05 | 0.00 | 0.00 | 3.18 |
3851 | 5083 | 0.933047 | GTTTTCGGGCTGCAACGTTC | 60.933 | 55.000 | 14.05 | 0.00 | 0.00 | 3.95 |
3852 | 5084 | 1.065109 | GTTTTCGGGCTGCAACGTT | 59.935 | 52.632 | 14.05 | 0.00 | 0.00 | 3.99 |
3853 | 5085 | 2.719354 | GTTTTCGGGCTGCAACGT | 59.281 | 55.556 | 14.05 | 0.00 | 0.00 | 3.99 |
3854 | 5086 | 2.426752 | CGTTTTCGGGCTGCAACG | 60.427 | 61.111 | 13.80 | 13.80 | 39.94 | 4.10 |
3864 | 5096 | 0.110238 | CATGTGCTGACCCGTTTTCG | 60.110 | 55.000 | 0.00 | 0.00 | 43.67 | 3.46 |
3865 | 5097 | 0.240945 | CCATGTGCTGACCCGTTTTC | 59.759 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
3866 | 5098 | 0.179004 | TCCATGTGCTGACCCGTTTT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 2.43 |
3867 | 5099 | 0.179004 | TTCCATGTGCTGACCCGTTT | 60.179 | 50.000 | 0.00 | 0.00 | 0.00 | 3.60 |
3868 | 5100 | 0.038166 | ATTCCATGTGCTGACCCGTT | 59.962 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
3869 | 5101 | 0.908910 | TATTCCATGTGCTGACCCGT | 59.091 | 50.000 | 0.00 | 0.00 | 0.00 | 5.28 |
3870 | 5102 | 1.875514 | CATATTCCATGTGCTGACCCG | 59.124 | 52.381 | 0.00 | 0.00 | 0.00 | 5.28 |
3871 | 5103 | 1.610522 | GCATATTCCATGTGCTGACCC | 59.389 | 52.381 | 0.00 | 0.00 | 43.11 | 4.46 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.