Multiple sequence alignment - TraesCS3B01G215600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS3B01G215600 chr3B 100.000 3245 0 0 1 3245 256728148 256731392 0.000000e+00 5993.0
1 TraesCS3B01G215600 chr3B 94.527 402 22 0 2844 3245 477532205 477532606 3.560000e-174 621.0
2 TraesCS3B01G215600 chr3B 94.937 395 19 1 2849 3243 493086500 493086107 4.600000e-173 617.0
3 TraesCS3B01G215600 chr3B 94.724 398 20 1 2848 3245 508262758 508262362 4.600000e-173 617.0
4 TraesCS3B01G215600 chr3B 94.486 399 21 1 2847 3245 414466603 414467000 5.950000e-172 614.0
5 TraesCS3B01G215600 chr3B 96.429 56 2 0 1549 1604 5598659 5598714 3.450000e-15 93.5
6 TraesCS3B01G215600 chr3D 97.539 2722 36 8 60 2775 178405367 178408063 0.000000e+00 4626.0
7 TraesCS3B01G215600 chr3A 96.030 2418 79 7 94 2510 219725550 219727951 0.000000e+00 3917.0
8 TraesCS3B01G215600 chr3A 94.030 67 1 3 1 65 40850644 40850579 7.410000e-17 99.0
9 TraesCS3B01G215600 chr3A 93.750 64 2 2 1 62 107565549 107565612 9.580000e-16 95.3
10 TraesCS3B01G215600 chr3A 93.103 58 2 2 60 115 219725482 219725539 2.070000e-12 84.2
11 TraesCS3B01G215600 chr7B 94.975 398 18 2 2848 3245 535894013 535893618 9.890000e-175 623.0
12 TraesCS3B01G215600 chr7B 86.957 69 6 3 1426 1492 605428539 605428472 1.250000e-09 75.0
13 TraesCS3B01G215600 chr7D 94.724 398 20 1 2848 3245 394549910 394550306 4.600000e-173 617.0
14 TraesCS3B01G215600 chr7D 96.667 60 0 2 1 58 66408510 66408569 7.410000e-17 99.0
15 TraesCS3B01G215600 chr4B 94.724 398 20 1 2848 3245 331352488 331352092 4.600000e-173 617.0
16 TraesCS3B01G215600 chr4B 93.056 72 5 0 1740 1811 385938707 385938778 4.430000e-19 106.0
17 TraesCS3B01G215600 chr4B 93.750 64 2 2 1 62 104813046 104813109 9.580000e-16 95.3
18 TraesCS3B01G215600 chr1D 94.710 397 21 0 2849 3245 28805361 28805757 4.600000e-173 617.0
19 TraesCS3B01G215600 chr1D 94.118 119 7 0 1819 1937 451260651 451260769 7.150000e-42 182.0
20 TraesCS3B01G215600 chr1B 94.472 398 22 0 2848 3245 282782704 282782307 5.950000e-172 614.0
21 TraesCS3B01G215600 chr1B 100.000 56 0 0 1 56 494234873 494234818 1.590000e-18 104.0
22 TraesCS3B01G215600 chr1B 88.235 68 6 2 1426 1492 649692716 649692782 2.680000e-11 80.5
23 TraesCS3B01G215600 chr2B 91.667 372 28 1 1453 1824 33755754 33755386 2.230000e-141 512.0
24 TraesCS3B01G215600 chr6A 89.891 366 34 1 1453 1818 508057610 508057972 4.900000e-128 468.0
25 TraesCS3B01G215600 chr6A 89.182 379 33 5 1444 1818 508131000 508131374 1.760000e-127 466.0
26 TraesCS3B01G215600 chr5D 93.651 126 8 0 1740 1865 42975332 42975457 4.270000e-44 189.0
27 TraesCS3B01G215600 chr2D 100.000 56 0 0 1 56 52224413 52224358 1.590000e-18 104.0
28 TraesCS3B01G215600 chr7A 95.161 62 3 0 1549 1610 623459907 623459968 7.410000e-17 99.0
29 TraesCS3B01G215600 chr7A 86.765 68 7 2 1426 1492 623459834 623459900 1.250000e-09 75.0
30 TraesCS3B01G215600 chr7A 85.294 68 8 2 1426 1492 717180997 717181063 5.810000e-08 69.4
31 TraesCS3B01G215600 chr4D 98.214 56 1 0 1 56 84999494 84999549 7.410000e-17 99.0
32 TraesCS3B01G215600 chr4A 95.238 63 1 2 1 61 161260656 161260594 7.410000e-17 99.0
33 TraesCS3B01G215600 chr4A 92.537 67 2 3 1 64 12207073 12207139 3.450000e-15 93.5
34 TraesCS3B01G215600 chrUn 96.429 56 2 0 1549 1604 464945795 464945740 3.450000e-15 93.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS3B01G215600 chr3B 256728148 256731392 3244 False 5993.0 5993 100.0000 1 3245 1 chr3B.!!$F2 3244
1 TraesCS3B01G215600 chr3D 178405367 178408063 2696 False 4626.0 4626 97.5390 60 2775 1 chr3D.!!$F1 2715
2 TraesCS3B01G215600 chr3A 219725482 219727951 2469 False 2000.6 3917 94.5665 60 2510 2 chr3A.!!$F2 2450

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
58 59 0.757188 AGATGAGTCCTAGCCACCCG 60.757 60.000 0.00 0.0 0.0 5.28 F
1981 2016 1.069090 GTGTGCACCGTCTTCCTCA 59.931 57.895 15.69 0.0 0.0 3.86 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2019 2054 2.186644 CGGGTCATCATGTCGCCA 59.813 61.111 0.0 0.0 0.0 5.69 R
3191 3231 0.032952 TTCTTCGTGGACCCTTCGTG 59.967 55.000 0.0 0.0 0.0 4.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
46 47 9.360901 ACATAGTTATGTCACATCTAGATGAGT 57.639 33.333 34.16 17.35 42.96 3.41
47 48 9.838975 CATAGTTATGTCACATCTAGATGAGTC 57.161 37.037 34.16 24.57 41.20 3.36
48 49 7.283625 AGTTATGTCACATCTAGATGAGTCC 57.716 40.000 34.16 21.59 41.20 3.85
49 50 7.066142 AGTTATGTCACATCTAGATGAGTCCT 58.934 38.462 34.16 20.26 41.20 3.85
50 51 8.221251 AGTTATGTCACATCTAGATGAGTCCTA 58.779 37.037 34.16 19.40 41.20 2.94
51 52 8.511321 GTTATGTCACATCTAGATGAGTCCTAG 58.489 40.741 34.16 16.09 41.20 3.02
52 53 4.824537 TGTCACATCTAGATGAGTCCTAGC 59.175 45.833 34.16 16.54 41.20 3.42
53 54 4.217550 GTCACATCTAGATGAGTCCTAGCC 59.782 50.000 34.16 10.77 41.20 3.93
54 55 4.141158 TCACATCTAGATGAGTCCTAGCCA 60.141 45.833 34.16 9.31 41.20 4.75
55 56 4.022416 CACATCTAGATGAGTCCTAGCCAC 60.022 50.000 34.16 0.00 41.20 5.01
56 57 3.231207 TCTAGATGAGTCCTAGCCACC 57.769 52.381 0.00 0.00 34.94 4.61
57 58 2.158445 TCTAGATGAGTCCTAGCCACCC 60.158 54.545 0.00 0.00 34.94 4.61
58 59 0.757188 AGATGAGTCCTAGCCACCCG 60.757 60.000 0.00 0.00 0.00 5.28
111 146 3.322828 TGGTAACAGAAGAAGGTTAGCGT 59.677 43.478 0.00 0.00 45.87 5.07
166 201 1.819632 CCGGCATACCACAGGCTTC 60.820 63.158 0.00 0.00 33.39 3.86
283 318 4.796495 CGGGCCAGGCAGGGTAAC 62.796 72.222 15.19 0.00 38.09 2.50
347 382 5.065346 CAGCACGATGGTCGATCTATATACT 59.935 44.000 6.34 0.00 43.74 2.12
887 922 7.308348 CCGGTCGCCATTGATTTAGTAATTTAT 60.308 37.037 0.00 0.00 0.00 1.40
888 923 8.073768 CGGTCGCCATTGATTTAGTAATTTATT 58.926 33.333 0.00 0.00 0.00 1.40
889 924 9.744468 GGTCGCCATTGATTTAGTAATTTATTT 57.256 29.630 0.00 0.00 0.00 1.40
1245 1280 3.873883 GAGATCGTCGCGGGTCGT 61.874 66.667 17.37 6.49 39.67 4.34
1641 1676 4.295119 GTGACCTCCGTGCACCGT 62.295 66.667 12.15 2.00 33.66 4.83
1672 1707 2.434884 ACGTGCGCCTCCTCAATG 60.435 61.111 4.18 0.00 0.00 2.82
1981 2016 1.069090 GTGTGCACCGTCTTCCTCA 59.931 57.895 15.69 0.00 0.00 3.86
2019 2054 1.378250 GCTCTGCCTGGCTGACATT 60.378 57.895 22.44 0.00 33.27 2.71
2115 2150 1.218316 GGACTCCATCGACACCCAC 59.782 63.158 0.00 0.00 0.00 4.61
2353 2388 1.070134 AGAGAAGCCTTGCGTGTTACA 59.930 47.619 0.00 0.00 0.00 2.41
2354 2389 1.871039 GAGAAGCCTTGCGTGTTACAA 59.129 47.619 0.00 0.00 0.00 2.41
2355 2390 1.873591 AGAAGCCTTGCGTGTTACAAG 59.126 47.619 0.00 0.00 43.36 3.16
2498 2533 1.273688 CGATGCCAACACAATGCATG 58.726 50.000 0.00 0.00 45.20 4.06
2565 2600 7.255942 CCAGTTGATTCACCTCACCTTTAAAAT 60.256 37.037 0.00 0.00 0.00 1.82
2654 2694 5.953205 CAGTTCAAATTCAACTGCAAAAACG 59.047 36.000 14.23 0.00 43.18 3.60
2655 2695 5.637387 AGTTCAAATTCAACTGCAAAAACGT 59.363 32.000 2.65 0.00 32.65 3.99
2658 2698 6.892691 TCAAATTCAACTGCAAAAACGTTTT 58.107 28.000 20.26 20.26 0.00 2.43
2659 2699 8.018677 TCAAATTCAACTGCAAAAACGTTTTA 57.981 26.923 25.44 10.32 0.00 1.52
2660 2700 8.660373 TCAAATTCAACTGCAAAAACGTTTTAT 58.340 25.926 25.44 13.37 0.00 1.40
2661 2701 9.907576 CAAATTCAACTGCAAAAACGTTTTATA 57.092 25.926 25.44 13.87 0.00 0.98
2721 2761 6.394025 ACTACCTCGGAATAGAAAGTCATC 57.606 41.667 3.62 0.00 0.00 2.92
2738 2778 5.874093 AGTCATCCTTCATCTTTCAACTGT 58.126 37.500 0.00 0.00 0.00 3.55
2748 2788 5.468072 TCATCTTTCAACTGTCTCTTTCAGC 59.532 40.000 0.00 0.00 36.50 4.26
2751 2791 0.514691 CAACTGTCTCTTTCAGCGGC 59.485 55.000 0.00 0.00 36.50 6.53
2775 2815 3.056322 GCTTTTGCCCAATCTCAAGACAT 60.056 43.478 0.00 0.00 40.15 3.06
2776 2816 4.491676 CTTTTGCCCAATCTCAAGACATG 58.508 43.478 0.00 0.00 0.00 3.21
2777 2817 2.885135 TGCCCAATCTCAAGACATGT 57.115 45.000 0.00 0.00 0.00 3.21
2778 2818 3.159213 TGCCCAATCTCAAGACATGTT 57.841 42.857 0.00 0.00 0.00 2.71
2779 2819 2.821378 TGCCCAATCTCAAGACATGTTG 59.179 45.455 0.00 0.00 0.00 3.33
2780 2820 3.084039 GCCCAATCTCAAGACATGTTGA 58.916 45.455 0.00 0.00 35.16 3.18
2781 2821 3.698040 GCCCAATCTCAAGACATGTTGAT 59.302 43.478 0.00 0.00 35.88 2.57
2782 2822 4.201990 GCCCAATCTCAAGACATGTTGATC 60.202 45.833 0.00 0.00 35.88 2.92
2783 2823 5.191426 CCCAATCTCAAGACATGTTGATCT 58.809 41.667 0.00 0.00 35.88 2.75
2784 2824 5.651139 CCCAATCTCAAGACATGTTGATCTT 59.349 40.000 0.00 0.00 35.88 2.40
2797 2837 9.455847 GACATGTTGATCTTGCTATAAAATTCC 57.544 33.333 0.00 0.00 0.00 3.01
2798 2838 9.193806 ACATGTTGATCTTGCTATAAAATTCCT 57.806 29.630 0.00 0.00 0.00 3.36
2803 2843 9.784531 TTGATCTTGCTATAAAATTCCTAGAGG 57.215 33.333 0.00 0.00 0.00 3.69
2804 2844 9.159254 TGATCTTGCTATAAAATTCCTAGAGGA 57.841 33.333 0.00 0.00 43.73 3.71
2805 2845 9.430623 GATCTTGCTATAAAATTCCTAGAGGAC 57.569 37.037 0.00 0.00 45.39 3.85
2806 2846 7.736893 TCTTGCTATAAAATTCCTAGAGGACC 58.263 38.462 0.00 0.00 45.39 4.46
2807 2847 7.347222 TCTTGCTATAAAATTCCTAGAGGACCA 59.653 37.037 0.00 0.00 45.39 4.02
2808 2848 7.633018 TGCTATAAAATTCCTAGAGGACCAT 57.367 36.000 0.00 0.00 45.39 3.55
2809 2849 7.680730 TGCTATAAAATTCCTAGAGGACCATC 58.319 38.462 0.00 0.00 45.39 3.51
2810 2850 7.106890 GCTATAAAATTCCTAGAGGACCATCC 58.893 42.308 0.00 0.00 45.39 3.51
2820 2860 3.483954 GGACCATCCTGACATGTGG 57.516 57.895 1.15 0.00 37.74 4.17
2821 2861 0.749454 GGACCATCCTGACATGTGGC 60.749 60.000 1.15 0.00 35.11 5.01
2822 2862 0.035152 GACCATCCTGACATGTGGCA 60.035 55.000 1.15 0.00 35.11 4.92
2823 2863 0.405198 ACCATCCTGACATGTGGCAA 59.595 50.000 1.15 0.00 35.11 4.52
2824 2864 1.006281 ACCATCCTGACATGTGGCAAT 59.994 47.619 1.15 0.00 35.11 3.56
2825 2865 2.241941 ACCATCCTGACATGTGGCAATA 59.758 45.455 1.15 0.00 35.11 1.90
2826 2866 2.620115 CCATCCTGACATGTGGCAATAC 59.380 50.000 1.15 0.00 29.15 1.89
2827 2867 2.418368 TCCTGACATGTGGCAATACC 57.582 50.000 1.15 0.00 39.84 2.73
2828 2868 1.915489 TCCTGACATGTGGCAATACCT 59.085 47.619 1.15 0.00 40.22 3.08
2829 2869 2.308570 TCCTGACATGTGGCAATACCTT 59.691 45.455 1.15 0.00 40.22 3.50
2830 2870 3.521531 TCCTGACATGTGGCAATACCTTA 59.478 43.478 1.15 0.00 40.22 2.69
2831 2871 3.627577 CCTGACATGTGGCAATACCTTAC 59.372 47.826 1.15 0.00 40.22 2.34
2832 2872 4.517285 CTGACATGTGGCAATACCTTACT 58.483 43.478 1.15 0.00 40.22 2.24
2833 2873 4.260985 TGACATGTGGCAATACCTTACTG 58.739 43.478 1.15 0.00 40.22 2.74
2834 2874 3.620488 ACATGTGGCAATACCTTACTGG 58.380 45.455 0.00 0.00 40.22 4.00
2835 2875 8.976033 CTGACATGTGGCAATACCTTACTGGT 62.976 46.154 1.15 0.00 42.36 4.00
2849 2889 6.851222 CCTTACTGGTGCTAAGTCATATTG 57.149 41.667 0.00 0.00 0.00 1.90
2850 2890 6.349300 CCTTACTGGTGCTAAGTCATATTGT 58.651 40.000 0.00 0.00 0.00 2.71
2851 2891 7.497595 CCTTACTGGTGCTAAGTCATATTGTA 58.502 38.462 0.00 0.00 0.00 2.41
2852 2892 7.653713 CCTTACTGGTGCTAAGTCATATTGTAG 59.346 40.741 0.00 0.00 0.00 2.74
2853 2893 5.918608 ACTGGTGCTAAGTCATATTGTAGG 58.081 41.667 0.00 0.00 0.00 3.18
2854 2894 5.661312 ACTGGTGCTAAGTCATATTGTAGGA 59.339 40.000 0.00 0.00 0.00 2.94
2855 2895 6.327626 ACTGGTGCTAAGTCATATTGTAGGAT 59.672 38.462 0.00 0.00 0.00 3.24
2856 2896 6.759272 TGGTGCTAAGTCATATTGTAGGATC 58.241 40.000 0.00 0.00 0.00 3.36
2857 2897 5.864474 GGTGCTAAGTCATATTGTAGGATCG 59.136 44.000 0.00 0.00 0.00 3.69
2858 2898 6.294564 GGTGCTAAGTCATATTGTAGGATCGA 60.295 42.308 0.00 0.00 0.00 3.59
2859 2899 7.145985 GTGCTAAGTCATATTGTAGGATCGAA 58.854 38.462 0.00 0.00 0.00 3.71
2860 2900 7.652105 GTGCTAAGTCATATTGTAGGATCGAAA 59.348 37.037 0.00 0.00 0.00 3.46
2861 2901 7.867909 TGCTAAGTCATATTGTAGGATCGAAAG 59.132 37.037 0.00 0.00 0.00 2.62
2862 2902 7.868415 GCTAAGTCATATTGTAGGATCGAAAGT 59.132 37.037 0.00 0.00 0.00 2.66
2865 2905 9.698309 AAGTCATATTGTAGGATCGAAAGTATG 57.302 33.333 0.00 0.00 0.00 2.39
2866 2906 8.861086 AGTCATATTGTAGGATCGAAAGTATGT 58.139 33.333 0.00 0.00 0.00 2.29
2867 2907 9.130312 GTCATATTGTAGGATCGAAAGTATGTC 57.870 37.037 0.00 0.00 0.00 3.06
2868 2908 9.078990 TCATATTGTAGGATCGAAAGTATGTCT 57.921 33.333 0.00 0.00 0.00 3.41
2871 2911 8.693120 ATTGTAGGATCGAAAGTATGTCTAGA 57.307 34.615 0.00 0.00 0.00 2.43
2872 2912 7.731882 TGTAGGATCGAAAGTATGTCTAGAG 57.268 40.000 0.00 0.00 0.00 2.43
2873 2913 6.711194 TGTAGGATCGAAAGTATGTCTAGAGG 59.289 42.308 0.00 0.00 0.00 3.69
2874 2914 5.697067 AGGATCGAAAGTATGTCTAGAGGT 58.303 41.667 0.00 0.00 0.00 3.85
2875 2915 5.533154 AGGATCGAAAGTATGTCTAGAGGTG 59.467 44.000 0.00 0.00 0.00 4.00
2876 2916 5.278561 GGATCGAAAGTATGTCTAGAGGTGG 60.279 48.000 0.00 0.00 0.00 4.61
2877 2917 3.952323 TCGAAAGTATGTCTAGAGGTGGG 59.048 47.826 0.00 0.00 0.00 4.61
2878 2918 3.068307 CGAAAGTATGTCTAGAGGTGGGG 59.932 52.174 0.00 0.00 0.00 4.96
2879 2919 3.778622 AAGTATGTCTAGAGGTGGGGT 57.221 47.619 0.00 0.00 0.00 4.95
2880 2920 3.033659 AGTATGTCTAGAGGTGGGGTG 57.966 52.381 0.00 0.00 0.00 4.61
2881 2921 2.585900 AGTATGTCTAGAGGTGGGGTGA 59.414 50.000 0.00 0.00 0.00 4.02
2882 2922 2.877154 ATGTCTAGAGGTGGGGTGAT 57.123 50.000 0.00 0.00 0.00 3.06
2883 2923 2.642171 TGTCTAGAGGTGGGGTGATT 57.358 50.000 0.00 0.00 0.00 2.57
2884 2924 3.769189 TGTCTAGAGGTGGGGTGATTA 57.231 47.619 0.00 0.00 0.00 1.75
2885 2925 3.643237 TGTCTAGAGGTGGGGTGATTAG 58.357 50.000 0.00 0.00 0.00 1.73
2886 2926 3.271225 TGTCTAGAGGTGGGGTGATTAGA 59.729 47.826 0.00 0.00 0.00 2.10
2887 2927 3.637694 GTCTAGAGGTGGGGTGATTAGAC 59.362 52.174 0.00 0.00 31.85 2.59
2888 2928 2.950990 AGAGGTGGGGTGATTAGACT 57.049 50.000 0.00 0.00 0.00 3.24
2889 2929 4.730392 TCTAGAGGTGGGGTGATTAGACTA 59.270 45.833 0.00 0.00 0.00 2.59
2890 2930 3.644335 AGAGGTGGGGTGATTAGACTAC 58.356 50.000 0.00 0.00 0.00 2.73
2891 2931 3.272551 AGAGGTGGGGTGATTAGACTACT 59.727 47.826 0.00 0.00 0.00 2.57
2892 2932 4.031611 GAGGTGGGGTGATTAGACTACTT 58.968 47.826 0.00 0.00 0.00 2.24
2893 2933 3.775316 AGGTGGGGTGATTAGACTACTTG 59.225 47.826 0.00 0.00 0.00 3.16
2894 2934 3.773119 GGTGGGGTGATTAGACTACTTGA 59.227 47.826 0.00 0.00 0.00 3.02
2895 2935 4.382793 GGTGGGGTGATTAGACTACTTGAC 60.383 50.000 0.00 0.00 0.00 3.18
2896 2936 3.773119 TGGGGTGATTAGACTACTTGACC 59.227 47.826 0.00 0.00 0.00 4.02
2897 2937 3.773119 GGGGTGATTAGACTACTTGACCA 59.227 47.826 0.00 0.00 0.00 4.02
2898 2938 4.224370 GGGGTGATTAGACTACTTGACCAA 59.776 45.833 0.00 0.00 0.00 3.67
2899 2939 5.280317 GGGGTGATTAGACTACTTGACCAAA 60.280 44.000 0.00 0.00 0.00 3.28
2900 2940 6.415573 GGGTGATTAGACTACTTGACCAAAT 58.584 40.000 0.00 0.00 0.00 2.32
2901 2941 7.365295 GGGGTGATTAGACTACTTGACCAAATA 60.365 40.741 0.00 0.00 0.00 1.40
2902 2942 8.044908 GGGTGATTAGACTACTTGACCAAATAA 58.955 37.037 0.00 0.00 0.00 1.40
2903 2943 9.444600 GGTGATTAGACTACTTGACCAAATAAA 57.555 33.333 0.00 0.00 0.00 1.40
2911 2951 9.989869 GACTACTTGACCAAATAAAAATCTAGC 57.010 33.333 0.00 0.00 0.00 3.42
2912 2952 9.515226 ACTACTTGACCAAATAAAAATCTAGCA 57.485 29.630 0.00 0.00 0.00 3.49
2934 2974 8.382030 AGCATTTTTCCAATTTTAGTTCTTGG 57.618 30.769 0.00 0.00 40.66 3.61
2935 2975 7.041167 AGCATTTTTCCAATTTTAGTTCTTGGC 60.041 33.333 0.00 0.00 39.42 4.52
2936 2976 7.255070 GCATTTTTCCAATTTTAGTTCTTGGCA 60.255 33.333 0.00 0.00 39.42 4.92
2937 2977 7.784633 TTTTTCCAATTTTAGTTCTTGGCAG 57.215 32.000 0.00 0.00 39.42 4.85
2938 2978 6.723298 TTTCCAATTTTAGTTCTTGGCAGA 57.277 33.333 0.00 0.00 39.42 4.26
2939 2979 6.916360 TTCCAATTTTAGTTCTTGGCAGAT 57.084 33.333 0.00 0.00 39.42 2.90
2940 2980 6.916360 TCCAATTTTAGTTCTTGGCAGATT 57.084 33.333 0.00 0.00 39.42 2.40
2941 2981 7.301868 TCCAATTTTAGTTCTTGGCAGATTT 57.698 32.000 0.00 0.00 39.42 2.17
2942 2982 7.734942 TCCAATTTTAGTTCTTGGCAGATTTT 58.265 30.769 0.00 0.00 39.42 1.82
2943 2983 8.865090 TCCAATTTTAGTTCTTGGCAGATTTTA 58.135 29.630 0.00 0.00 39.42 1.52
2944 2984 9.143631 CCAATTTTAGTTCTTGGCAGATTTTAG 57.856 33.333 0.00 0.00 33.59 1.85
2945 2985 8.650714 CAATTTTAGTTCTTGGCAGATTTTAGC 58.349 33.333 0.00 0.00 0.00 3.09
2946 2986 6.892658 TTTAGTTCTTGGCAGATTTTAGCA 57.107 33.333 0.00 0.00 0.00 3.49
2947 2987 6.892658 TTAGTTCTTGGCAGATTTTAGCAA 57.107 33.333 0.00 0.00 0.00 3.91
2948 2988 5.126396 AGTTCTTGGCAGATTTTAGCAAC 57.874 39.130 0.00 0.00 0.00 4.17
2949 2989 4.829492 AGTTCTTGGCAGATTTTAGCAACT 59.171 37.500 0.00 0.00 0.00 3.16
2950 2990 5.302823 AGTTCTTGGCAGATTTTAGCAACTT 59.697 36.000 0.00 0.00 0.00 2.66
2951 2991 6.490040 AGTTCTTGGCAGATTTTAGCAACTTA 59.510 34.615 0.00 0.00 0.00 2.24
2952 2992 6.500684 TCTTGGCAGATTTTAGCAACTTAG 57.499 37.500 0.00 0.00 0.00 2.18
2953 2993 4.701956 TGGCAGATTTTAGCAACTTAGC 57.298 40.909 0.00 0.00 0.00 3.09
2954 2994 4.078537 TGGCAGATTTTAGCAACTTAGCA 58.921 39.130 0.00 0.00 36.85 3.49
2955 2995 4.082787 TGGCAGATTTTAGCAACTTAGCAC 60.083 41.667 0.00 0.00 36.85 4.40
2956 2996 4.082787 GGCAGATTTTAGCAACTTAGCACA 60.083 41.667 0.00 0.00 36.85 4.57
2957 2997 5.460646 GCAGATTTTAGCAACTTAGCACAA 58.539 37.500 0.00 0.00 36.85 3.33
2958 2998 5.570589 GCAGATTTTAGCAACTTAGCACAAG 59.429 40.000 0.00 0.00 36.85 3.16
2959 2999 6.672147 CAGATTTTAGCAACTTAGCACAAGT 58.328 36.000 0.00 0.00 36.85 3.16
2960 3000 6.798959 CAGATTTTAGCAACTTAGCACAAGTC 59.201 38.462 4.41 0.00 36.85 3.01
2961 3001 6.486657 AGATTTTAGCAACTTAGCACAAGTCA 59.513 34.615 4.41 0.00 36.85 3.41
2962 3002 6.443934 TTTTAGCAACTTAGCACAAGTCAA 57.556 33.333 4.41 0.00 36.85 3.18
2963 3003 6.443934 TTTAGCAACTTAGCACAAGTCAAA 57.556 33.333 4.41 1.97 36.85 2.69
2964 3004 4.292977 AGCAACTTAGCACAAGTCAAAC 57.707 40.909 4.41 0.00 36.85 2.93
2965 3005 3.694072 AGCAACTTAGCACAAGTCAAACA 59.306 39.130 4.41 0.00 36.85 2.83
2966 3006 4.157656 AGCAACTTAGCACAAGTCAAACAA 59.842 37.500 4.41 0.00 36.85 2.83
2967 3007 5.043248 GCAACTTAGCACAAGTCAAACAAT 58.957 37.500 4.41 0.00 0.00 2.71
2968 3008 5.173854 GCAACTTAGCACAAGTCAAACAATC 59.826 40.000 4.41 0.00 0.00 2.67
2969 3009 6.498304 CAACTTAGCACAAGTCAAACAATCT 58.502 36.000 4.41 0.00 0.00 2.40
2970 3010 6.699575 ACTTAGCACAAGTCAAACAATCTT 57.300 33.333 0.00 0.00 0.00 2.40
2971 3011 7.801716 ACTTAGCACAAGTCAAACAATCTTA 57.198 32.000 0.00 0.00 0.00 2.10
2972 3012 8.220755 ACTTAGCACAAGTCAAACAATCTTAA 57.779 30.769 0.00 0.00 0.00 1.85
2973 3013 8.129211 ACTTAGCACAAGTCAAACAATCTTAAC 58.871 33.333 0.00 0.00 0.00 2.01
2974 3014 6.449635 AGCACAAGTCAAACAATCTTAACA 57.550 33.333 0.00 0.00 0.00 2.41
2975 3015 6.265577 AGCACAAGTCAAACAATCTTAACAC 58.734 36.000 0.00 0.00 0.00 3.32
2976 3016 6.033341 GCACAAGTCAAACAATCTTAACACA 58.967 36.000 0.00 0.00 0.00 3.72
2977 3017 6.529829 GCACAAGTCAAACAATCTTAACACAA 59.470 34.615 0.00 0.00 0.00 3.33
2978 3018 7.462724 GCACAAGTCAAACAATCTTAACACAAC 60.463 37.037 0.00 0.00 0.00 3.32
2979 3019 7.754924 CACAAGTCAAACAATCTTAACACAACT 59.245 33.333 0.00 0.00 0.00 3.16
2980 3020 7.968405 ACAAGTCAAACAATCTTAACACAACTC 59.032 33.333 0.00 0.00 0.00 3.01
2981 3021 7.624360 AGTCAAACAATCTTAACACAACTCA 57.376 32.000 0.00 0.00 0.00 3.41
2982 3022 8.050778 AGTCAAACAATCTTAACACAACTCAA 57.949 30.769 0.00 0.00 0.00 3.02
2983 3023 8.184192 AGTCAAACAATCTTAACACAACTCAAG 58.816 33.333 0.00 0.00 0.00 3.02
2984 3024 6.972328 TCAAACAATCTTAACACAACTCAAGC 59.028 34.615 0.00 0.00 0.00 4.01
2985 3025 6.449635 AACAATCTTAACACAACTCAAGCA 57.550 33.333 0.00 0.00 0.00 3.91
2986 3026 6.449635 ACAATCTTAACACAACTCAAGCAA 57.550 33.333 0.00 0.00 0.00 3.91
2987 3027 6.498304 ACAATCTTAACACAACTCAAGCAAG 58.502 36.000 0.00 0.00 0.00 4.01
2988 3028 4.552166 TCTTAACACAACTCAAGCAAGC 57.448 40.909 0.00 0.00 0.00 4.01
2989 3029 3.944650 TCTTAACACAACTCAAGCAAGCA 59.055 39.130 0.00 0.00 0.00 3.91
2990 3030 4.580167 TCTTAACACAACTCAAGCAAGCAT 59.420 37.500 0.00 0.00 0.00 3.79
2991 3031 2.787601 ACACAACTCAAGCAAGCATG 57.212 45.000 0.00 0.00 0.00 4.06
3007 3047 5.450171 CAAGCATGCAAAGAGTATATGAGC 58.550 41.667 21.98 0.00 0.00 4.26
3008 3048 4.711399 AGCATGCAAAGAGTATATGAGCA 58.289 39.130 21.98 0.00 34.78 4.26
3009 3049 5.128205 AGCATGCAAAGAGTATATGAGCAA 58.872 37.500 21.98 0.00 33.91 3.91
3010 3050 5.008415 AGCATGCAAAGAGTATATGAGCAAC 59.992 40.000 21.98 0.00 33.91 4.17
3011 3051 5.438117 CATGCAAAGAGTATATGAGCAACG 58.562 41.667 0.00 0.00 33.91 4.10
3012 3052 3.871006 TGCAAAGAGTATATGAGCAACGG 59.129 43.478 0.00 0.00 0.00 4.44
3013 3053 4.119862 GCAAAGAGTATATGAGCAACGGA 58.880 43.478 0.00 0.00 0.00 4.69
3014 3054 4.570772 GCAAAGAGTATATGAGCAACGGAA 59.429 41.667 0.00 0.00 0.00 4.30
3015 3055 5.064707 GCAAAGAGTATATGAGCAACGGAAA 59.935 40.000 0.00 0.00 0.00 3.13
3016 3056 6.709643 CAAAGAGTATATGAGCAACGGAAAG 58.290 40.000 0.00 0.00 0.00 2.62
3017 3057 5.599999 AGAGTATATGAGCAACGGAAAGT 57.400 39.130 0.00 0.00 0.00 2.66
3018 3058 6.710597 AGAGTATATGAGCAACGGAAAGTA 57.289 37.500 0.00 0.00 0.00 2.24
3019 3059 7.108841 AGAGTATATGAGCAACGGAAAGTAA 57.891 36.000 0.00 0.00 0.00 2.24
3020 3060 7.553334 AGAGTATATGAGCAACGGAAAGTAAA 58.447 34.615 0.00 0.00 0.00 2.01
3021 3061 7.707035 AGAGTATATGAGCAACGGAAAGTAAAG 59.293 37.037 0.00 0.00 0.00 1.85
3022 3062 3.831715 ATGAGCAACGGAAAGTAAAGC 57.168 42.857 0.00 0.00 0.00 3.51
3023 3063 2.566913 TGAGCAACGGAAAGTAAAGCA 58.433 42.857 0.00 0.00 0.00 3.91
3024 3064 3.146066 TGAGCAACGGAAAGTAAAGCAT 58.854 40.909 0.00 0.00 0.00 3.79
3025 3065 3.058293 TGAGCAACGGAAAGTAAAGCATG 60.058 43.478 0.00 0.00 0.00 4.06
3026 3066 1.985684 GCAACGGAAAGTAAAGCATGC 59.014 47.619 10.51 10.51 0.00 4.06
3027 3067 2.606795 GCAACGGAAAGTAAAGCATGCA 60.607 45.455 21.98 0.00 0.00 3.96
3028 3068 3.637432 CAACGGAAAGTAAAGCATGCAA 58.363 40.909 21.98 1.32 0.00 4.08
3029 3069 3.282831 ACGGAAAGTAAAGCATGCAAC 57.717 42.857 21.98 14.61 0.00 4.17
3030 3070 2.884639 ACGGAAAGTAAAGCATGCAACT 59.115 40.909 21.98 16.68 0.00 3.16
3031 3071 3.317993 ACGGAAAGTAAAGCATGCAACTT 59.682 39.130 21.98 21.26 33.72 2.66
3032 3072 3.670055 CGGAAAGTAAAGCATGCAACTTG 59.330 43.478 24.72 14.04 32.69 3.16
3033 3073 3.429881 GGAAAGTAAAGCATGCAACTTGC 59.570 43.478 24.72 23.16 45.29 4.01
3047 3087 5.094429 GCAACTTGCAAAAATGTAAAGGG 57.906 39.130 8.97 0.00 44.26 3.95
3048 3088 4.813697 GCAACTTGCAAAAATGTAAAGGGA 59.186 37.500 8.97 0.00 44.26 4.20
3049 3089 5.295540 GCAACTTGCAAAAATGTAAAGGGAA 59.704 36.000 8.97 0.00 44.26 3.97
3050 3090 6.511605 GCAACTTGCAAAAATGTAAAGGGAAG 60.512 38.462 8.97 0.00 44.26 3.46
3051 3091 5.610398 ACTTGCAAAAATGTAAAGGGAAGG 58.390 37.500 0.00 0.00 0.00 3.46
3052 3092 4.615588 TGCAAAAATGTAAAGGGAAGGG 57.384 40.909 0.00 0.00 0.00 3.95
3053 3093 3.970640 TGCAAAAATGTAAAGGGAAGGGT 59.029 39.130 0.00 0.00 0.00 4.34
3054 3094 4.410555 TGCAAAAATGTAAAGGGAAGGGTT 59.589 37.500 0.00 0.00 0.00 4.11
3055 3095 5.104318 TGCAAAAATGTAAAGGGAAGGGTTT 60.104 36.000 0.00 0.00 0.00 3.27
3056 3096 5.238432 GCAAAAATGTAAAGGGAAGGGTTTG 59.762 40.000 0.00 0.00 0.00 2.93
3057 3097 5.560722 AAAATGTAAAGGGAAGGGTTTGG 57.439 39.130 0.00 0.00 0.00 3.28
3058 3098 4.479156 AATGTAAAGGGAAGGGTTTGGA 57.521 40.909 0.00 0.00 0.00 3.53
3059 3099 3.518992 TGTAAAGGGAAGGGTTTGGAG 57.481 47.619 0.00 0.00 0.00 3.86
3060 3100 3.057586 TGTAAAGGGAAGGGTTTGGAGA 58.942 45.455 0.00 0.00 0.00 3.71
3061 3101 2.980246 AAAGGGAAGGGTTTGGAGAG 57.020 50.000 0.00 0.00 0.00 3.20
3062 3102 1.834540 AAGGGAAGGGTTTGGAGAGT 58.165 50.000 0.00 0.00 0.00 3.24
3063 3103 1.068121 AGGGAAGGGTTTGGAGAGTG 58.932 55.000 0.00 0.00 0.00 3.51
3064 3104 0.609406 GGGAAGGGTTTGGAGAGTGC 60.609 60.000 0.00 0.00 0.00 4.40
3065 3105 0.110486 GGAAGGGTTTGGAGAGTGCA 59.890 55.000 0.00 0.00 0.00 4.57
3066 3106 1.478654 GGAAGGGTTTGGAGAGTGCAA 60.479 52.381 0.00 0.00 0.00 4.08
3067 3107 2.306847 GAAGGGTTTGGAGAGTGCAAA 58.693 47.619 0.00 0.00 35.32 3.68
3070 3110 3.164028 GTTTGGAGAGTGCAAACGC 57.836 52.632 8.07 0.00 45.84 4.84
3071 3111 0.380378 GTTTGGAGAGTGCAAACGCA 59.620 50.000 8.07 0.00 45.84 5.24
3072 3112 1.098869 TTTGGAGAGTGCAAACGCAA 58.901 45.000 0.00 0.00 42.17 4.85
3073 3113 1.317613 TTGGAGAGTGCAAACGCAAT 58.682 45.000 0.00 0.00 42.17 3.56
3074 3114 2.177394 TGGAGAGTGCAAACGCAATA 57.823 45.000 0.00 0.00 42.17 1.90
3075 3115 2.076100 TGGAGAGTGCAAACGCAATAG 58.924 47.619 0.00 0.00 42.17 1.73
3076 3116 1.398390 GGAGAGTGCAAACGCAATAGG 59.602 52.381 0.00 0.00 42.17 2.57
3077 3117 2.346803 GAGAGTGCAAACGCAATAGGA 58.653 47.619 0.00 0.00 42.17 2.94
3078 3118 2.349886 GAGAGTGCAAACGCAATAGGAG 59.650 50.000 0.00 0.00 42.17 3.69
3079 3119 2.028112 AGAGTGCAAACGCAATAGGAGA 60.028 45.455 0.00 0.00 42.17 3.71
3080 3120 2.076863 AGTGCAAACGCAATAGGAGAC 58.923 47.619 0.00 0.00 42.17 3.36
3081 3121 1.804151 GTGCAAACGCAATAGGAGACA 59.196 47.619 0.00 0.00 42.17 3.41
3082 3122 1.804151 TGCAAACGCAATAGGAGACAC 59.196 47.619 0.00 0.00 36.16 3.67
3083 3123 1.201921 GCAAACGCAATAGGAGACACG 60.202 52.381 0.00 0.00 0.00 4.49
3084 3124 1.393539 CAAACGCAATAGGAGACACGG 59.606 52.381 0.00 0.00 0.00 4.94
3085 3125 0.892755 AACGCAATAGGAGACACGGA 59.107 50.000 0.00 0.00 0.00 4.69
3086 3126 1.112113 ACGCAATAGGAGACACGGAT 58.888 50.000 0.00 0.00 0.00 4.18
3087 3127 1.202417 ACGCAATAGGAGACACGGATG 60.202 52.381 0.00 0.00 0.00 3.51
3088 3128 1.202417 CGCAATAGGAGACACGGATGT 60.202 52.381 0.00 0.00 43.71 3.06
3089 3129 2.738643 CGCAATAGGAGACACGGATGTT 60.739 50.000 0.00 0.00 39.95 2.71
3090 3130 3.270877 GCAATAGGAGACACGGATGTTT 58.729 45.455 0.00 0.00 39.95 2.83
3091 3131 3.689649 GCAATAGGAGACACGGATGTTTT 59.310 43.478 0.00 0.00 39.95 2.43
3092 3132 4.156008 GCAATAGGAGACACGGATGTTTTT 59.844 41.667 0.00 0.00 39.95 1.94
3093 3133 5.353123 GCAATAGGAGACACGGATGTTTTTA 59.647 40.000 0.00 0.00 39.95 1.52
3094 3134 6.038271 GCAATAGGAGACACGGATGTTTTTAT 59.962 38.462 0.00 0.00 39.95 1.40
3095 3135 7.630924 CAATAGGAGACACGGATGTTTTTATC 58.369 38.462 0.00 0.00 39.95 1.75
3096 3136 4.181578 AGGAGACACGGATGTTTTTATCG 58.818 43.478 0.00 0.00 39.95 2.92
3097 3137 3.930848 GGAGACACGGATGTTTTTATCGT 59.069 43.478 0.00 0.00 39.95 3.73
3098 3138 4.201685 GGAGACACGGATGTTTTTATCGTG 60.202 45.833 11.74 11.74 39.95 4.35
3099 3139 3.682858 AGACACGGATGTTTTTATCGTGG 59.317 43.478 16.48 1.88 39.95 4.94
3100 3140 3.404899 ACACGGATGTTTTTATCGTGGT 58.595 40.909 16.48 2.41 34.46 4.16
3101 3141 3.816523 ACACGGATGTTTTTATCGTGGTT 59.183 39.130 16.48 0.00 34.46 3.67
3102 3142 4.276431 ACACGGATGTTTTTATCGTGGTTT 59.724 37.500 16.48 0.00 34.46 3.27
3103 3143 4.849383 CACGGATGTTTTTATCGTGGTTTC 59.151 41.667 0.00 0.00 32.81 2.78
3104 3144 4.085884 CGGATGTTTTTATCGTGGTTTCG 58.914 43.478 0.00 0.00 0.00 3.46
3105 3145 4.143073 CGGATGTTTTTATCGTGGTTTCGA 60.143 41.667 0.00 0.00 43.86 3.71
3107 3147 6.237888 CGGATGTTTTTATCGTGGTTTCGATA 60.238 38.462 4.98 4.98 46.53 2.92
3127 3167 3.944055 AGATGGTGCTATCGTACATCC 57.056 47.619 0.00 0.00 32.33 3.51
3128 3168 3.230976 AGATGGTGCTATCGTACATCCA 58.769 45.455 0.00 0.00 32.33 3.41
3129 3169 2.882927 TGGTGCTATCGTACATCCAC 57.117 50.000 0.00 0.00 0.00 4.02
3130 3170 2.104170 TGGTGCTATCGTACATCCACA 58.896 47.619 0.00 0.00 0.00 4.17
3131 3171 2.698274 TGGTGCTATCGTACATCCACAT 59.302 45.455 0.00 0.00 0.00 3.21
3132 3172 3.133901 TGGTGCTATCGTACATCCACATT 59.866 43.478 0.00 0.00 0.00 2.71
3133 3173 3.494626 GGTGCTATCGTACATCCACATTG 59.505 47.826 0.00 0.00 0.00 2.82
3134 3174 4.368315 GTGCTATCGTACATCCACATTGA 58.632 43.478 0.00 0.00 0.00 2.57
3135 3175 4.991056 GTGCTATCGTACATCCACATTGAT 59.009 41.667 0.00 0.00 0.00 2.57
3136 3176 4.990426 TGCTATCGTACATCCACATTGATG 59.010 41.667 0.00 0.00 46.10 3.07
3137 3177 4.389992 GCTATCGTACATCCACATTGATGG 59.610 45.833 6.04 0.00 45.16 3.51
3151 3191 2.859165 TGATGGAGACTTCAACCCAC 57.141 50.000 0.00 0.00 41.09 4.61
3152 3192 1.001974 TGATGGAGACTTCAACCCACG 59.998 52.381 0.00 0.00 41.09 4.94
3153 3193 1.275291 GATGGAGACTTCAACCCACGA 59.725 52.381 0.00 0.00 34.76 4.35
3154 3194 1.124780 TGGAGACTTCAACCCACGAA 58.875 50.000 0.00 0.00 0.00 3.85
3155 3195 1.487142 TGGAGACTTCAACCCACGAAA 59.513 47.619 0.00 0.00 0.00 3.46
3156 3196 2.143925 GGAGACTTCAACCCACGAAAG 58.856 52.381 0.00 0.00 0.00 2.62
3157 3197 2.143925 GAGACTTCAACCCACGAAAGG 58.856 52.381 0.00 0.00 0.00 3.11
3158 3198 1.489230 AGACTTCAACCCACGAAAGGT 59.511 47.619 0.00 0.00 40.14 3.50
3159 3199 2.701951 AGACTTCAACCCACGAAAGGTA 59.298 45.455 0.00 0.00 36.27 3.08
3160 3200 3.135167 AGACTTCAACCCACGAAAGGTAA 59.865 43.478 0.00 0.00 36.27 2.85
3161 3201 3.208594 ACTTCAACCCACGAAAGGTAAC 58.791 45.455 0.00 0.00 36.27 2.50
3162 3202 3.207778 CTTCAACCCACGAAAGGTAACA 58.792 45.455 0.00 0.00 36.27 2.41
3163 3203 2.841215 TCAACCCACGAAAGGTAACAG 58.159 47.619 0.00 0.00 36.27 3.16
3164 3204 2.171027 TCAACCCACGAAAGGTAACAGT 59.829 45.455 0.00 0.00 36.27 3.55
3165 3205 2.946990 CAACCCACGAAAGGTAACAGTT 59.053 45.455 0.00 0.00 36.27 3.16
3166 3206 2.567985 ACCCACGAAAGGTAACAGTTG 58.432 47.619 0.00 0.00 35.24 3.16
3167 3207 1.265905 CCCACGAAAGGTAACAGTTGC 59.734 52.381 0.00 0.00 41.41 4.17
3168 3208 1.070175 CCACGAAAGGTAACAGTTGCG 60.070 52.381 0.00 0.00 41.41 4.85
3169 3209 0.584876 ACGAAAGGTAACAGTTGCGC 59.415 50.000 0.00 0.00 41.41 6.09
3170 3210 0.450482 CGAAAGGTAACAGTTGCGCG 60.450 55.000 0.00 0.00 41.41 6.86
3171 3211 0.863144 GAAAGGTAACAGTTGCGCGA 59.137 50.000 12.10 0.00 41.41 5.87
3172 3212 0.865769 AAAGGTAACAGTTGCGCGAG 59.134 50.000 12.10 0.00 41.41 5.03
3173 3213 0.249741 AAGGTAACAGTTGCGCGAGT 60.250 50.000 12.10 0.00 41.41 4.18
3174 3214 0.666577 AGGTAACAGTTGCGCGAGTC 60.667 55.000 12.10 0.00 41.41 3.36
3175 3215 1.623973 GGTAACAGTTGCGCGAGTCC 61.624 60.000 12.10 0.00 0.00 3.85
3176 3216 0.942410 GTAACAGTTGCGCGAGTCCA 60.942 55.000 12.10 0.00 0.00 4.02
3177 3217 0.942410 TAACAGTTGCGCGAGTCCAC 60.942 55.000 12.10 0.00 0.00 4.02
3178 3218 3.767230 CAGTTGCGCGAGTCCACG 61.767 66.667 12.10 0.00 0.00 4.94
3179 3219 3.973516 AGTTGCGCGAGTCCACGA 61.974 61.111 12.10 0.00 35.09 4.35
3180 3220 3.033764 GTTGCGCGAGTCCACGAA 61.034 61.111 12.10 0.00 35.09 3.85
3181 3221 2.733218 TTGCGCGAGTCCACGAAG 60.733 61.111 12.10 0.00 35.09 3.79
3182 3222 4.717629 TGCGCGAGTCCACGAAGG 62.718 66.667 12.10 0.00 39.47 3.46
3189 3229 2.047179 GTCCACGAAGGGCTCCAC 60.047 66.667 0.00 0.00 39.61 4.02
3190 3230 3.319198 TCCACGAAGGGCTCCACC 61.319 66.667 0.00 0.00 38.24 4.61
3207 3247 2.738480 CCACGAAGGGTCCACGAA 59.262 61.111 11.86 0.00 0.00 3.85
3208 3248 1.374252 CCACGAAGGGTCCACGAAG 60.374 63.158 11.86 5.69 0.00 3.79
3209 3249 1.663739 CACGAAGGGTCCACGAAGA 59.336 57.895 11.86 0.00 0.00 2.87
3210 3250 0.032952 CACGAAGGGTCCACGAAGAA 59.967 55.000 11.86 0.00 0.00 2.52
3211 3251 0.317479 ACGAAGGGTCCACGAAGAAG 59.683 55.000 11.86 0.00 0.00 2.85
3212 3252 1.014564 CGAAGGGTCCACGAAGAAGC 61.015 60.000 0.00 0.00 0.00 3.86
3213 3253 0.034896 GAAGGGTCCACGAAGAAGCA 59.965 55.000 0.00 0.00 0.00 3.91
3214 3254 0.472471 AAGGGTCCACGAAGAAGCAA 59.528 50.000 0.00 0.00 0.00 3.91
3215 3255 0.250338 AGGGTCCACGAAGAAGCAAC 60.250 55.000 0.00 0.00 0.00 4.17
3216 3256 1.235281 GGGTCCACGAAGAAGCAACC 61.235 60.000 0.00 0.00 0.00 3.77
3217 3257 0.250338 GGTCCACGAAGAAGCAACCT 60.250 55.000 0.00 0.00 0.00 3.50
3218 3258 1.594331 GTCCACGAAGAAGCAACCTT 58.406 50.000 0.00 0.00 0.00 3.50
3219 3259 1.264288 GTCCACGAAGAAGCAACCTTG 59.736 52.381 0.00 0.00 0.00 3.61
3220 3260 1.134220 TCCACGAAGAAGCAACCTTGT 60.134 47.619 0.00 0.00 0.00 3.16
3221 3261 1.264288 CCACGAAGAAGCAACCTTGTC 59.736 52.381 0.00 0.00 0.00 3.18
3222 3262 2.213499 CACGAAGAAGCAACCTTGTCT 58.787 47.619 0.00 0.00 0.00 3.41
3223 3263 3.390135 CACGAAGAAGCAACCTTGTCTA 58.610 45.455 0.00 0.00 0.00 2.59
3224 3264 3.997021 CACGAAGAAGCAACCTTGTCTAT 59.003 43.478 0.00 0.00 0.00 1.98
3225 3265 4.092091 CACGAAGAAGCAACCTTGTCTATC 59.908 45.833 0.00 0.00 0.00 2.08
3226 3266 3.619038 CGAAGAAGCAACCTTGTCTATCC 59.381 47.826 0.00 0.00 0.00 2.59
3227 3267 3.636153 AGAAGCAACCTTGTCTATCCC 57.364 47.619 0.00 0.00 0.00 3.85
3228 3268 2.912956 AGAAGCAACCTTGTCTATCCCA 59.087 45.455 0.00 0.00 0.00 4.37
3229 3269 2.789409 AGCAACCTTGTCTATCCCAC 57.211 50.000 0.00 0.00 0.00 4.61
3230 3270 1.282157 AGCAACCTTGTCTATCCCACC 59.718 52.381 0.00 0.00 0.00 4.61
3231 3271 1.004277 GCAACCTTGTCTATCCCACCA 59.996 52.381 0.00 0.00 0.00 4.17
3232 3272 2.357154 GCAACCTTGTCTATCCCACCAT 60.357 50.000 0.00 0.00 0.00 3.55
3233 3273 3.282021 CAACCTTGTCTATCCCACCATG 58.718 50.000 0.00 0.00 0.00 3.66
3234 3274 1.846439 ACCTTGTCTATCCCACCATGG 59.154 52.381 11.19 11.19 37.25 3.66
3235 3275 1.477558 CCTTGTCTATCCCACCATGGC 60.478 57.143 13.04 0.00 35.79 4.40
3236 3276 1.492176 CTTGTCTATCCCACCATGGCT 59.508 52.381 13.04 0.00 35.79 4.75
3237 3277 0.839277 TGTCTATCCCACCATGGCTG 59.161 55.000 13.04 9.45 35.79 4.85
3238 3278 0.839946 GTCTATCCCACCATGGCTGT 59.160 55.000 13.04 0.00 35.79 4.40
3239 3279 1.131638 TCTATCCCACCATGGCTGTC 58.868 55.000 13.04 0.00 35.79 3.51
3240 3280 0.250038 CTATCCCACCATGGCTGTCG 60.250 60.000 13.04 2.46 35.79 4.35
3241 3281 2.324014 TATCCCACCATGGCTGTCGC 62.324 60.000 13.04 0.00 35.79 5.19
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.838975 CTCATCTAGATGTGACATAACTATGTC 57.161 37.037 27.80 18.85 46.60 3.06
20 21 9.360901 ACTCATCTAGATGTGACATAACTATGT 57.639 33.333 31.51 9.95 42.86 2.29
21 22 9.838975 GACTCATCTAGATGTGACATAACTATG 57.161 37.037 31.51 7.64 39.72 2.23
22 23 9.019656 GGACTCATCTAGATGTGACATAACTAT 57.980 37.037 31.51 13.01 39.72 2.12
23 24 8.221251 AGGACTCATCTAGATGTGACATAACTA 58.779 37.037 31.51 11.24 39.72 2.24
24 25 7.066142 AGGACTCATCTAGATGTGACATAACT 58.934 38.462 31.51 18.63 39.72 2.24
25 26 7.283625 AGGACTCATCTAGATGTGACATAAC 57.716 40.000 31.51 17.19 39.72 1.89
26 27 7.175816 GCTAGGACTCATCTAGATGTGACATAA 59.824 40.741 31.51 17.42 39.72 1.90
27 28 6.657117 GCTAGGACTCATCTAGATGTGACATA 59.343 42.308 31.51 25.96 39.72 2.29
28 29 5.476599 GCTAGGACTCATCTAGATGTGACAT 59.523 44.000 31.51 26.18 39.72 3.06
29 30 4.824537 GCTAGGACTCATCTAGATGTGACA 59.175 45.833 31.51 14.63 39.72 3.58
30 31 4.217550 GGCTAGGACTCATCTAGATGTGAC 59.782 50.000 31.51 26.28 39.72 3.67
31 32 4.141158 TGGCTAGGACTCATCTAGATGTGA 60.141 45.833 31.51 16.50 39.72 3.58
32 33 4.022416 GTGGCTAGGACTCATCTAGATGTG 60.022 50.000 27.80 26.80 39.72 3.21
33 34 4.148838 GTGGCTAGGACTCATCTAGATGT 58.851 47.826 27.80 13.30 39.72 3.06
34 35 3.509575 GGTGGCTAGGACTCATCTAGATG 59.490 52.174 24.32 24.32 37.08 2.90
35 36 3.501385 GGGTGGCTAGGACTCATCTAGAT 60.501 52.174 0.00 0.00 37.08 1.98
36 37 2.158445 GGGTGGCTAGGACTCATCTAGA 60.158 54.545 0.00 0.00 37.08 2.43
37 38 2.243810 GGGTGGCTAGGACTCATCTAG 58.756 57.143 0.00 0.00 37.76 2.43
38 39 1.478837 CGGGTGGCTAGGACTCATCTA 60.479 57.143 0.00 0.00 0.00 1.98
39 40 0.757188 CGGGTGGCTAGGACTCATCT 60.757 60.000 0.00 0.00 0.00 2.90
40 41 1.043673 ACGGGTGGCTAGGACTCATC 61.044 60.000 0.00 0.00 0.00 2.92
41 42 0.617820 AACGGGTGGCTAGGACTCAT 60.618 55.000 0.00 0.00 0.00 2.90
42 43 0.040058 TAACGGGTGGCTAGGACTCA 59.960 55.000 0.00 0.00 0.00 3.41
43 44 0.745468 CTAACGGGTGGCTAGGACTC 59.255 60.000 0.00 0.00 0.00 3.36
44 45 0.333993 TCTAACGGGTGGCTAGGACT 59.666 55.000 0.00 0.00 0.00 3.85
45 46 1.188863 TTCTAACGGGTGGCTAGGAC 58.811 55.000 0.00 0.00 0.00 3.85
46 47 2.037144 GATTCTAACGGGTGGCTAGGA 58.963 52.381 0.00 0.00 0.00 2.94
47 48 1.760613 TGATTCTAACGGGTGGCTAGG 59.239 52.381 0.00 0.00 0.00 3.02
48 49 3.195661 GTTGATTCTAACGGGTGGCTAG 58.804 50.000 0.00 0.00 0.00 3.42
49 50 2.093341 GGTTGATTCTAACGGGTGGCTA 60.093 50.000 0.00 0.00 0.00 3.93
50 51 1.339727 GGTTGATTCTAACGGGTGGCT 60.340 52.381 0.00 0.00 0.00 4.75
51 52 1.092348 GGTTGATTCTAACGGGTGGC 58.908 55.000 0.00 0.00 0.00 5.01
52 53 2.747446 CAAGGTTGATTCTAACGGGTGG 59.253 50.000 0.00 0.00 0.00 4.61
53 54 3.670625 TCAAGGTTGATTCTAACGGGTG 58.329 45.455 0.00 0.00 31.01 4.61
54 55 4.569719 ATCAAGGTTGATTCTAACGGGT 57.430 40.909 0.00 0.00 45.13 5.28
104 139 7.967303 ACAAGTTCTGAAGTATACTACGCTAAC 59.033 37.037 5.65 7.67 0.00 2.34
109 144 9.488124 GTTCTACAAGTTCTGAAGTATACTACG 57.512 37.037 5.65 0.00 0.00 3.51
242 277 3.065306 CTACCCAAGCCACGGACA 58.935 61.111 0.00 0.00 0.00 4.02
280 315 3.245443 TGGCTAAATTTGGCTCTGGGTTA 60.245 43.478 23.54 1.22 34.79 2.85
283 318 1.851304 TGGCTAAATTTGGCTCTGGG 58.149 50.000 23.54 0.00 34.79 4.45
726 761 2.801162 CGACAGTGACGACGGCTG 60.801 66.667 9.44 8.43 36.41 4.85
2019 2054 2.186644 CGGGTCATCATGTCGCCA 59.813 61.111 0.00 0.00 0.00 5.69
2332 2367 1.461127 GTAACACGCAAGGCTTCTCTG 59.539 52.381 0.00 0.00 46.39 3.35
2353 2388 4.811908 TGTACGCACACACACATATACTT 58.188 39.130 0.00 0.00 0.00 2.24
2354 2389 4.443913 TGTACGCACACACACATATACT 57.556 40.909 0.00 0.00 0.00 2.12
2355 2390 5.289917 TCAATGTACGCACACACACATATAC 59.710 40.000 0.00 0.00 37.54 1.47
2498 2533 1.429463 CACGAGCTGTTAGTTGTCCC 58.571 55.000 0.00 0.00 0.00 4.46
2697 2737 6.489361 GGATGACTTTCTATTCCGAGGTAGTA 59.511 42.308 0.00 0.00 0.00 1.82
2698 2738 5.302313 GGATGACTTTCTATTCCGAGGTAGT 59.698 44.000 0.00 0.00 0.00 2.73
2699 2739 5.536916 AGGATGACTTTCTATTCCGAGGTAG 59.463 44.000 0.00 0.00 0.00 3.18
2705 2745 6.520272 AGATGAAGGATGACTTTCTATTCCG 58.480 40.000 0.00 0.00 40.21 4.30
2721 2761 6.484643 TGAAAGAGACAGTTGAAAGATGAAGG 59.515 38.462 0.00 0.00 0.00 3.46
2738 2778 3.063526 AGCTGCCGCTGAAAGAGA 58.936 55.556 0.21 0.00 46.86 3.10
2751 2791 2.559668 TCTTGAGATTGGGCAAAAGCTG 59.440 45.455 0.00 0.00 0.00 4.24
2777 2817 9.784531 CCTCTAGGAATTTTATAGCAAGATCAA 57.215 33.333 0.00 0.00 37.39 2.57
2778 2818 9.159254 TCCTCTAGGAATTTTATAGCAAGATCA 57.841 33.333 0.00 0.00 42.18 2.92
2785 2825 7.037945 AGGATGGTCCTCTAGGAATTTTATAGC 60.038 40.741 0.00 0.00 45.66 2.97
2786 2826 8.317679 CAGGATGGTCCTCTAGGAATTTTATAG 58.682 40.741 0.00 0.00 45.66 1.31
2787 2827 8.016652 TCAGGATGGTCCTCTAGGAATTTTATA 58.983 37.037 0.00 0.00 45.66 0.98
2788 2828 6.851836 TCAGGATGGTCCTCTAGGAATTTTAT 59.148 38.462 0.00 0.00 45.66 1.40
2789 2829 6.099845 GTCAGGATGGTCCTCTAGGAATTTTA 59.900 42.308 0.00 0.00 45.66 1.52
2790 2830 5.039645 TCAGGATGGTCCTCTAGGAATTTT 58.960 41.667 0.00 0.00 45.66 1.82
2791 2831 4.410555 GTCAGGATGGTCCTCTAGGAATTT 59.589 45.833 0.00 0.00 45.66 1.82
2792 2832 3.970640 GTCAGGATGGTCCTCTAGGAATT 59.029 47.826 0.00 0.00 45.66 2.17
2793 2833 3.051803 TGTCAGGATGGTCCTCTAGGAAT 60.052 47.826 0.00 0.00 45.66 3.01
2794 2834 2.314852 TGTCAGGATGGTCCTCTAGGAA 59.685 50.000 0.00 0.00 45.66 3.36
2795 2835 1.930204 TGTCAGGATGGTCCTCTAGGA 59.070 52.381 0.00 0.00 45.66 2.94
2796 2836 2.461300 TGTCAGGATGGTCCTCTAGG 57.539 55.000 0.00 0.00 45.66 3.02
2797 2837 3.069300 CACATGTCAGGATGGTCCTCTAG 59.931 52.174 0.00 0.00 45.66 2.43
2798 2838 3.033909 CACATGTCAGGATGGTCCTCTA 58.966 50.000 0.00 0.00 45.66 2.43
2799 2839 1.836166 CACATGTCAGGATGGTCCTCT 59.164 52.381 0.00 0.00 45.66 3.69
2800 2840 1.134280 CCACATGTCAGGATGGTCCTC 60.134 57.143 0.00 0.00 45.66 3.71
2802 2842 0.749454 GCCACATGTCAGGATGGTCC 60.749 60.000 6.40 0.00 36.16 4.46
2803 2843 0.035152 TGCCACATGTCAGGATGGTC 60.035 55.000 6.40 0.00 36.16 4.02
2804 2844 0.405198 TTGCCACATGTCAGGATGGT 59.595 50.000 6.40 0.00 36.16 3.55
2805 2845 1.771565 ATTGCCACATGTCAGGATGG 58.228 50.000 6.40 0.00 36.16 3.51
2806 2846 2.620115 GGTATTGCCACATGTCAGGATG 59.380 50.000 6.40 0.00 37.17 3.51
2807 2847 2.511218 AGGTATTGCCACATGTCAGGAT 59.489 45.455 6.40 0.00 40.61 3.24
2808 2848 1.915489 AGGTATTGCCACATGTCAGGA 59.085 47.619 6.40 0.00 40.61 3.86
2809 2849 2.425143 AGGTATTGCCACATGTCAGG 57.575 50.000 0.00 0.00 40.61 3.86
2810 2850 4.333649 CAGTAAGGTATTGCCACATGTCAG 59.666 45.833 0.00 0.00 40.61 3.51
2811 2851 4.260985 CAGTAAGGTATTGCCACATGTCA 58.739 43.478 0.00 0.00 40.61 3.58
2812 2852 3.627577 CCAGTAAGGTATTGCCACATGTC 59.372 47.826 0.00 0.00 40.61 3.06
2813 2853 3.620488 CCAGTAAGGTATTGCCACATGT 58.380 45.455 0.00 0.00 40.61 3.21
2826 2866 6.349300 ACAATATGACTTAGCACCAGTAAGG 58.651 40.000 0.00 0.00 45.67 2.69
2827 2867 7.653713 CCTACAATATGACTTAGCACCAGTAAG 59.346 40.741 0.00 0.00 34.24 2.34
2828 2868 7.343574 TCCTACAATATGACTTAGCACCAGTAA 59.656 37.037 0.00 0.00 0.00 2.24
2829 2869 6.837048 TCCTACAATATGACTTAGCACCAGTA 59.163 38.462 0.00 0.00 0.00 2.74
2830 2870 5.661312 TCCTACAATATGACTTAGCACCAGT 59.339 40.000 0.00 0.00 0.00 4.00
2831 2871 6.161855 TCCTACAATATGACTTAGCACCAG 57.838 41.667 0.00 0.00 0.00 4.00
2832 2872 6.516693 CGATCCTACAATATGACTTAGCACCA 60.517 42.308 0.00 0.00 0.00 4.17
2833 2873 5.864474 CGATCCTACAATATGACTTAGCACC 59.136 44.000 0.00 0.00 0.00 5.01
2834 2874 6.678878 TCGATCCTACAATATGACTTAGCAC 58.321 40.000 0.00 0.00 0.00 4.40
2835 2875 6.894339 TCGATCCTACAATATGACTTAGCA 57.106 37.500 0.00 0.00 0.00 3.49
2836 2876 7.868415 ACTTTCGATCCTACAATATGACTTAGC 59.132 37.037 0.00 0.00 0.00 3.09
2839 2879 9.698309 CATACTTTCGATCCTACAATATGACTT 57.302 33.333 0.00 0.00 0.00 3.01
2840 2880 8.861086 ACATACTTTCGATCCTACAATATGACT 58.139 33.333 0.00 0.00 0.00 3.41
2841 2881 9.130312 GACATACTTTCGATCCTACAATATGAC 57.870 37.037 0.00 0.00 0.00 3.06
2842 2882 9.078990 AGACATACTTTCGATCCTACAATATGA 57.921 33.333 0.00 0.00 0.00 2.15
2845 2885 9.788889 TCTAGACATACTTTCGATCCTACAATA 57.211 33.333 0.00 0.00 0.00 1.90
2846 2886 8.693120 TCTAGACATACTTTCGATCCTACAAT 57.307 34.615 0.00 0.00 0.00 2.71
2847 2887 7.228906 CCTCTAGACATACTTTCGATCCTACAA 59.771 40.741 0.00 0.00 0.00 2.41
2848 2888 6.711194 CCTCTAGACATACTTTCGATCCTACA 59.289 42.308 0.00 0.00 0.00 2.74
2849 2889 6.711645 ACCTCTAGACATACTTTCGATCCTAC 59.288 42.308 0.00 0.00 0.00 3.18
2850 2890 6.711194 CACCTCTAGACATACTTTCGATCCTA 59.289 42.308 0.00 0.00 0.00 2.94
2851 2891 5.533154 CACCTCTAGACATACTTTCGATCCT 59.467 44.000 0.00 0.00 0.00 3.24
2852 2892 5.278561 CCACCTCTAGACATACTTTCGATCC 60.279 48.000 0.00 0.00 0.00 3.36
2853 2893 5.278561 CCCACCTCTAGACATACTTTCGATC 60.279 48.000 0.00 0.00 0.00 3.69
2854 2894 4.585162 CCCACCTCTAGACATACTTTCGAT 59.415 45.833 0.00 0.00 0.00 3.59
2855 2895 3.952323 CCCACCTCTAGACATACTTTCGA 59.048 47.826 0.00 0.00 0.00 3.71
2856 2896 3.068307 CCCCACCTCTAGACATACTTTCG 59.932 52.174 0.00 0.00 0.00 3.46
2857 2897 4.031611 ACCCCACCTCTAGACATACTTTC 58.968 47.826 0.00 0.00 0.00 2.62
2858 2898 3.775316 CACCCCACCTCTAGACATACTTT 59.225 47.826 0.00 0.00 0.00 2.66
2859 2899 3.012502 TCACCCCACCTCTAGACATACTT 59.987 47.826 0.00 0.00 0.00 2.24
2860 2900 2.585900 TCACCCCACCTCTAGACATACT 59.414 50.000 0.00 0.00 0.00 2.12
2861 2901 3.028094 TCACCCCACCTCTAGACATAC 57.972 52.381 0.00 0.00 0.00 2.39
2862 2902 3.993658 ATCACCCCACCTCTAGACATA 57.006 47.619 0.00 0.00 0.00 2.29
2863 2903 2.877154 ATCACCCCACCTCTAGACAT 57.123 50.000 0.00 0.00 0.00 3.06
2864 2904 2.642171 AATCACCCCACCTCTAGACA 57.358 50.000 0.00 0.00 0.00 3.41
2865 2905 3.637694 GTCTAATCACCCCACCTCTAGAC 59.362 52.174 0.00 0.00 0.00 2.59
2866 2906 3.532232 AGTCTAATCACCCCACCTCTAGA 59.468 47.826 0.00 0.00 0.00 2.43
2867 2907 3.917300 AGTCTAATCACCCCACCTCTAG 58.083 50.000 0.00 0.00 0.00 2.43
2868 2908 4.481280 AGTAGTCTAATCACCCCACCTCTA 59.519 45.833 0.00 0.00 0.00 2.43
2869 2909 2.950990 AGTCTAATCACCCCACCTCT 57.049 50.000 0.00 0.00 0.00 3.69
2870 2910 3.644335 AGTAGTCTAATCACCCCACCTC 58.356 50.000 0.00 0.00 0.00 3.85
2871 2911 3.775316 CAAGTAGTCTAATCACCCCACCT 59.225 47.826 0.00 0.00 0.00 4.00
2872 2912 3.773119 TCAAGTAGTCTAATCACCCCACC 59.227 47.826 0.00 0.00 0.00 4.61
2873 2913 4.382793 GGTCAAGTAGTCTAATCACCCCAC 60.383 50.000 0.00 0.00 0.00 4.61
2874 2914 3.773119 GGTCAAGTAGTCTAATCACCCCA 59.227 47.826 0.00 0.00 0.00 4.96
2875 2915 3.773119 TGGTCAAGTAGTCTAATCACCCC 59.227 47.826 6.13 0.00 0.00 4.95
2876 2916 5.416271 TTGGTCAAGTAGTCTAATCACCC 57.584 43.478 6.13 0.00 0.00 4.61
2877 2917 9.444600 TTTATTTGGTCAAGTAGTCTAATCACC 57.555 33.333 2.72 2.72 0.00 4.02
2885 2925 9.989869 GCTAGATTTTTATTTGGTCAAGTAGTC 57.010 33.333 0.00 0.00 0.00 2.59
2886 2926 9.515226 TGCTAGATTTTTATTTGGTCAAGTAGT 57.485 29.630 0.00 0.00 0.00 2.73
2908 2948 9.487790 CCAAGAACTAAAATTGGAAAAATGCTA 57.512 29.630 0.00 0.00 45.19 3.49
2909 2949 7.041167 GCCAAGAACTAAAATTGGAAAAATGCT 60.041 33.333 7.35 0.00 45.19 3.79
2910 2950 7.077605 GCCAAGAACTAAAATTGGAAAAATGC 58.922 34.615 7.35 0.00 45.19 3.56
2911 2951 8.152309 TGCCAAGAACTAAAATTGGAAAAATG 57.848 30.769 7.35 0.00 45.19 2.32
2912 2952 8.210265 TCTGCCAAGAACTAAAATTGGAAAAAT 58.790 29.630 7.35 0.00 45.19 1.82
2913 2953 7.560368 TCTGCCAAGAACTAAAATTGGAAAAA 58.440 30.769 7.35 0.00 45.19 1.94
2914 2954 7.118496 TCTGCCAAGAACTAAAATTGGAAAA 57.882 32.000 7.35 0.00 45.19 2.29
2915 2955 6.723298 TCTGCCAAGAACTAAAATTGGAAA 57.277 33.333 7.35 0.00 45.19 3.13
2916 2956 6.916360 ATCTGCCAAGAACTAAAATTGGAA 57.084 33.333 7.35 0.00 45.19 3.53
2917 2957 6.916360 AATCTGCCAAGAACTAAAATTGGA 57.084 33.333 7.35 0.00 45.19 3.53
2918 2958 7.967890 AAAATCTGCCAAGAACTAAAATTGG 57.032 32.000 0.00 0.00 45.16 3.16
2919 2959 8.650714 GCTAAAATCTGCCAAGAACTAAAATTG 58.349 33.333 0.00 0.00 35.59 2.32
2920 2960 8.367156 TGCTAAAATCTGCCAAGAACTAAAATT 58.633 29.630 0.00 0.00 35.59 1.82
2921 2961 7.895759 TGCTAAAATCTGCCAAGAACTAAAAT 58.104 30.769 0.00 0.00 35.59 1.82
2922 2962 7.283625 TGCTAAAATCTGCCAAGAACTAAAA 57.716 32.000 0.00 0.00 35.59 1.52
2923 2963 6.892658 TGCTAAAATCTGCCAAGAACTAAA 57.107 33.333 0.00 0.00 35.59 1.85
2924 2964 6.490040 AGTTGCTAAAATCTGCCAAGAACTAA 59.510 34.615 0.00 0.00 35.59 2.24
2925 2965 6.003950 AGTTGCTAAAATCTGCCAAGAACTA 58.996 36.000 0.00 0.00 35.59 2.24
2926 2966 4.829492 AGTTGCTAAAATCTGCCAAGAACT 59.171 37.500 0.00 0.00 35.59 3.01
2927 2967 5.126396 AGTTGCTAAAATCTGCCAAGAAC 57.874 39.130 0.00 0.00 35.59 3.01
2928 2968 5.789643 AAGTTGCTAAAATCTGCCAAGAA 57.210 34.783 0.00 0.00 35.59 2.52
2929 2969 5.106157 GCTAAGTTGCTAAAATCTGCCAAGA 60.106 40.000 0.00 0.00 36.69 3.02
2930 2970 5.098211 GCTAAGTTGCTAAAATCTGCCAAG 58.902 41.667 0.00 0.00 0.00 3.61
2931 2971 4.522405 TGCTAAGTTGCTAAAATCTGCCAA 59.478 37.500 0.00 0.00 0.00 4.52
2932 2972 4.078537 TGCTAAGTTGCTAAAATCTGCCA 58.921 39.130 0.00 0.00 0.00 4.92
2933 2973 4.082787 TGTGCTAAGTTGCTAAAATCTGCC 60.083 41.667 0.00 0.00 0.00 4.85
2934 2974 5.046910 TGTGCTAAGTTGCTAAAATCTGC 57.953 39.130 0.00 0.00 0.00 4.26
2935 2975 6.672147 ACTTGTGCTAAGTTGCTAAAATCTG 58.328 36.000 1.75 0.00 0.00 2.90
2936 2976 6.486657 TGACTTGTGCTAAGTTGCTAAAATCT 59.513 34.615 8.07 0.00 0.00 2.40
2937 2977 6.668323 TGACTTGTGCTAAGTTGCTAAAATC 58.332 36.000 8.07 0.00 0.00 2.17
2938 2978 6.633500 TGACTTGTGCTAAGTTGCTAAAAT 57.367 33.333 8.07 0.00 0.00 1.82
2939 2979 6.443934 TTGACTTGTGCTAAGTTGCTAAAA 57.556 33.333 8.07 0.00 0.00 1.52
2940 2980 6.127869 TGTTTGACTTGTGCTAAGTTGCTAAA 60.128 34.615 8.07 6.01 0.00 1.85
2941 2981 5.355630 TGTTTGACTTGTGCTAAGTTGCTAA 59.644 36.000 8.07 0.00 0.00 3.09
2942 2982 4.878971 TGTTTGACTTGTGCTAAGTTGCTA 59.121 37.500 8.07 0.00 0.00 3.49
2943 2983 3.694072 TGTTTGACTTGTGCTAAGTTGCT 59.306 39.130 8.07 0.00 0.00 3.91
2944 2984 4.027572 TGTTTGACTTGTGCTAAGTTGC 57.972 40.909 8.07 0.00 0.00 4.17
2945 2985 6.498304 AGATTGTTTGACTTGTGCTAAGTTG 58.502 36.000 8.07 0.00 0.00 3.16
2946 2986 6.699575 AGATTGTTTGACTTGTGCTAAGTT 57.300 33.333 8.07 0.00 0.00 2.66
2947 2987 6.699575 AAGATTGTTTGACTTGTGCTAAGT 57.300 33.333 6.63 6.63 0.00 2.24
2948 2988 8.128582 TGTTAAGATTGTTTGACTTGTGCTAAG 58.871 33.333 0.00 0.58 0.00 2.18
2949 2989 7.913297 GTGTTAAGATTGTTTGACTTGTGCTAA 59.087 33.333 0.00 0.00 0.00 3.09
2950 2990 7.066404 TGTGTTAAGATTGTTTGACTTGTGCTA 59.934 33.333 0.00 0.00 0.00 3.49
2951 2991 6.127758 TGTGTTAAGATTGTTTGACTTGTGCT 60.128 34.615 0.00 0.00 0.00 4.40
2952 2992 6.033341 TGTGTTAAGATTGTTTGACTTGTGC 58.967 36.000 0.00 0.00 0.00 4.57
2953 2993 7.754924 AGTTGTGTTAAGATTGTTTGACTTGTG 59.245 33.333 0.00 0.00 0.00 3.33
2954 2994 7.826690 AGTTGTGTTAAGATTGTTTGACTTGT 58.173 30.769 0.00 0.00 0.00 3.16
2955 2995 7.967854 TGAGTTGTGTTAAGATTGTTTGACTTG 59.032 33.333 0.00 0.00 0.00 3.16
2956 2996 8.050778 TGAGTTGTGTTAAGATTGTTTGACTT 57.949 30.769 0.00 0.00 0.00 3.01
2957 2997 7.624360 TGAGTTGTGTTAAGATTGTTTGACT 57.376 32.000 0.00 0.00 0.00 3.41
2958 2998 7.044052 GCTTGAGTTGTGTTAAGATTGTTTGAC 60.044 37.037 0.00 0.00 0.00 3.18
2959 2999 6.972328 GCTTGAGTTGTGTTAAGATTGTTTGA 59.028 34.615 0.00 0.00 0.00 2.69
2960 3000 6.751425 TGCTTGAGTTGTGTTAAGATTGTTTG 59.249 34.615 0.00 0.00 0.00 2.93
2961 3001 6.862209 TGCTTGAGTTGTGTTAAGATTGTTT 58.138 32.000 0.00 0.00 0.00 2.83
2962 3002 6.449635 TGCTTGAGTTGTGTTAAGATTGTT 57.550 33.333 0.00 0.00 0.00 2.83
2963 3003 6.449635 TTGCTTGAGTTGTGTTAAGATTGT 57.550 33.333 0.00 0.00 0.00 2.71
2964 3004 5.400485 GCTTGCTTGAGTTGTGTTAAGATTG 59.600 40.000 0.00 0.00 0.00 2.67
2965 3005 5.067674 TGCTTGCTTGAGTTGTGTTAAGATT 59.932 36.000 0.00 0.00 0.00 2.40
2966 3006 4.580167 TGCTTGCTTGAGTTGTGTTAAGAT 59.420 37.500 0.00 0.00 0.00 2.40
2967 3007 3.944650 TGCTTGCTTGAGTTGTGTTAAGA 59.055 39.130 0.00 0.00 0.00 2.10
2968 3008 4.291540 TGCTTGCTTGAGTTGTGTTAAG 57.708 40.909 0.00 0.00 0.00 1.85
2969 3009 4.609947 CATGCTTGCTTGAGTTGTGTTAA 58.390 39.130 2.83 0.00 0.00 2.01
2970 3010 3.550639 GCATGCTTGCTTGAGTTGTGTTA 60.551 43.478 16.80 0.00 45.77 2.41
2971 3011 2.800629 GCATGCTTGCTTGAGTTGTGTT 60.801 45.455 16.80 0.00 45.77 3.32
2972 3012 1.269413 GCATGCTTGCTTGAGTTGTGT 60.269 47.619 16.80 0.00 45.77 3.72
2973 3013 1.415374 GCATGCTTGCTTGAGTTGTG 58.585 50.000 16.80 0.00 45.77 3.33
2974 3014 3.879912 GCATGCTTGCTTGAGTTGT 57.120 47.368 16.80 0.00 45.77 3.32
2984 3024 5.008316 TGCTCATATACTCTTTGCATGCTTG 59.992 40.000 20.33 8.92 0.00 4.01
2985 3025 5.128205 TGCTCATATACTCTTTGCATGCTT 58.872 37.500 20.33 0.00 0.00 3.91
2986 3026 4.711399 TGCTCATATACTCTTTGCATGCT 58.289 39.130 20.33 0.00 0.00 3.79
2987 3027 5.210715 GTTGCTCATATACTCTTTGCATGC 58.789 41.667 11.82 11.82 0.00 4.06
2988 3028 5.438117 CGTTGCTCATATACTCTTTGCATG 58.562 41.667 0.00 0.00 0.00 4.06
2989 3029 4.512944 CCGTTGCTCATATACTCTTTGCAT 59.487 41.667 0.00 0.00 0.00 3.96
2990 3030 3.871006 CCGTTGCTCATATACTCTTTGCA 59.129 43.478 0.00 0.00 0.00 4.08
2991 3031 4.119862 TCCGTTGCTCATATACTCTTTGC 58.880 43.478 0.00 0.00 0.00 3.68
2992 3032 6.313905 ACTTTCCGTTGCTCATATACTCTTTG 59.686 38.462 0.00 0.00 0.00 2.77
2993 3033 6.407202 ACTTTCCGTTGCTCATATACTCTTT 58.593 36.000 0.00 0.00 0.00 2.52
2994 3034 5.978814 ACTTTCCGTTGCTCATATACTCTT 58.021 37.500 0.00 0.00 0.00 2.85
2995 3035 5.599999 ACTTTCCGTTGCTCATATACTCT 57.400 39.130 0.00 0.00 0.00 3.24
2996 3036 7.516943 GCTTTACTTTCCGTTGCTCATATACTC 60.517 40.741 0.00 0.00 0.00 2.59
2997 3037 6.258068 GCTTTACTTTCCGTTGCTCATATACT 59.742 38.462 0.00 0.00 0.00 2.12
2998 3038 6.036735 TGCTTTACTTTCCGTTGCTCATATAC 59.963 38.462 0.00 0.00 0.00 1.47
2999 3039 6.110033 TGCTTTACTTTCCGTTGCTCATATA 58.890 36.000 0.00 0.00 0.00 0.86
3000 3040 4.941263 TGCTTTACTTTCCGTTGCTCATAT 59.059 37.500 0.00 0.00 0.00 1.78
3001 3041 4.320023 TGCTTTACTTTCCGTTGCTCATA 58.680 39.130 0.00 0.00 0.00 2.15
3002 3042 3.146066 TGCTTTACTTTCCGTTGCTCAT 58.854 40.909 0.00 0.00 0.00 2.90
3003 3043 2.566913 TGCTTTACTTTCCGTTGCTCA 58.433 42.857 0.00 0.00 0.00 4.26
3004 3044 3.492313 CATGCTTTACTTTCCGTTGCTC 58.508 45.455 0.00 0.00 0.00 4.26
3005 3045 2.351738 GCATGCTTTACTTTCCGTTGCT 60.352 45.455 11.37 0.00 0.00 3.91
3006 3046 1.985684 GCATGCTTTACTTTCCGTTGC 59.014 47.619 11.37 0.00 0.00 4.17
3007 3047 3.281341 TGCATGCTTTACTTTCCGTTG 57.719 42.857 20.33 0.00 0.00 4.10
3008 3048 3.317993 AGTTGCATGCTTTACTTTCCGTT 59.682 39.130 20.33 0.00 0.00 4.44
3009 3049 2.884639 AGTTGCATGCTTTACTTTCCGT 59.115 40.909 20.33 0.00 0.00 4.69
3010 3050 3.559238 AGTTGCATGCTTTACTTTCCG 57.441 42.857 20.33 0.00 0.00 4.30
3011 3051 3.429881 GCAAGTTGCATGCTTTACTTTCC 59.570 43.478 22.90 13.47 44.26 3.13
3012 3052 4.635961 GCAAGTTGCATGCTTTACTTTC 57.364 40.909 22.90 15.07 44.26 2.62
3025 3065 4.813697 TCCCTTTACATTTTTGCAAGTTGC 59.186 37.500 21.17 21.17 45.29 4.17
3026 3066 6.018016 CCTTCCCTTTACATTTTTGCAAGTTG 60.018 38.462 0.00 0.00 0.00 3.16
3027 3067 6.054941 CCTTCCCTTTACATTTTTGCAAGTT 58.945 36.000 0.00 0.00 0.00 2.66
3028 3068 5.454613 CCCTTCCCTTTACATTTTTGCAAGT 60.455 40.000 0.00 0.00 0.00 3.16
3029 3069 4.996758 CCCTTCCCTTTACATTTTTGCAAG 59.003 41.667 0.00 0.00 0.00 4.01
3030 3070 4.410555 ACCCTTCCCTTTACATTTTTGCAA 59.589 37.500 0.00 0.00 0.00 4.08
3031 3071 3.970640 ACCCTTCCCTTTACATTTTTGCA 59.029 39.130 0.00 0.00 0.00 4.08
3032 3072 4.617253 ACCCTTCCCTTTACATTTTTGC 57.383 40.909 0.00 0.00 0.00 3.68
3033 3073 5.762711 CCAAACCCTTCCCTTTACATTTTTG 59.237 40.000 0.00 0.00 0.00 2.44
3034 3074 5.668080 TCCAAACCCTTCCCTTTACATTTTT 59.332 36.000 0.00 0.00 0.00 1.94
3035 3075 5.220521 TCCAAACCCTTCCCTTTACATTTT 58.779 37.500 0.00 0.00 0.00 1.82
3036 3076 4.821940 TCCAAACCCTTCCCTTTACATTT 58.178 39.130 0.00 0.00 0.00 2.32
3037 3077 4.107311 TCTCCAAACCCTTCCCTTTACATT 59.893 41.667 0.00 0.00 0.00 2.71
3038 3078 3.660669 TCTCCAAACCCTTCCCTTTACAT 59.339 43.478 0.00 0.00 0.00 2.29
3039 3079 3.057586 TCTCCAAACCCTTCCCTTTACA 58.942 45.455 0.00 0.00 0.00 2.41
3040 3080 3.074094 ACTCTCCAAACCCTTCCCTTTAC 59.926 47.826 0.00 0.00 0.00 2.01
3041 3081 3.073946 CACTCTCCAAACCCTTCCCTTTA 59.926 47.826 0.00 0.00 0.00 1.85
3042 3082 2.144450 ACTCTCCAAACCCTTCCCTTT 58.856 47.619 0.00 0.00 0.00 3.11
3043 3083 1.425448 CACTCTCCAAACCCTTCCCTT 59.575 52.381 0.00 0.00 0.00 3.95
3044 3084 1.068121 CACTCTCCAAACCCTTCCCT 58.932 55.000 0.00 0.00 0.00 4.20
3045 3085 0.609406 GCACTCTCCAAACCCTTCCC 60.609 60.000 0.00 0.00 0.00 3.97
3046 3086 0.110486 TGCACTCTCCAAACCCTTCC 59.890 55.000 0.00 0.00 0.00 3.46
3047 3087 1.981256 TTGCACTCTCCAAACCCTTC 58.019 50.000 0.00 0.00 0.00 3.46
3048 3088 2.031870 GTTTGCACTCTCCAAACCCTT 58.968 47.619 5.87 0.00 43.74 3.95
3049 3089 1.692411 GTTTGCACTCTCCAAACCCT 58.308 50.000 5.87 0.00 43.74 4.34
3050 3090 0.310854 CGTTTGCACTCTCCAAACCC 59.689 55.000 10.34 0.00 45.62 4.11
3051 3091 0.317854 GCGTTTGCACTCTCCAAACC 60.318 55.000 10.34 2.13 45.62 3.27
3052 3092 3.164028 GCGTTTGCACTCTCCAAAC 57.836 52.632 6.87 6.87 45.19 2.93
3063 3103 1.201921 CGTGTCTCCTATTGCGTTTGC 60.202 52.381 0.00 0.00 43.20 3.68
3064 3104 1.393539 CCGTGTCTCCTATTGCGTTTG 59.606 52.381 0.00 0.00 0.00 2.93
3065 3105 1.274167 TCCGTGTCTCCTATTGCGTTT 59.726 47.619 0.00 0.00 0.00 3.60
3066 3106 0.892755 TCCGTGTCTCCTATTGCGTT 59.107 50.000 0.00 0.00 0.00 4.84
3067 3107 1.112113 ATCCGTGTCTCCTATTGCGT 58.888 50.000 0.00 0.00 0.00 5.24
3068 3108 1.202417 ACATCCGTGTCTCCTATTGCG 60.202 52.381 0.00 0.00 31.41 4.85
3069 3109 2.604046 ACATCCGTGTCTCCTATTGC 57.396 50.000 0.00 0.00 31.41 3.56
3070 3110 5.880054 AAAAACATCCGTGTCTCCTATTG 57.120 39.130 0.00 0.00 37.67 1.90
3071 3111 6.479001 CGATAAAAACATCCGTGTCTCCTATT 59.521 38.462 0.00 0.00 37.67 1.73
3072 3112 5.983720 CGATAAAAACATCCGTGTCTCCTAT 59.016 40.000 0.00 0.00 37.67 2.57
3073 3113 5.105635 ACGATAAAAACATCCGTGTCTCCTA 60.106 40.000 0.00 0.00 37.67 2.94
3074 3114 4.181578 CGATAAAAACATCCGTGTCTCCT 58.818 43.478 0.00 0.00 37.67 3.69
3075 3115 3.930848 ACGATAAAAACATCCGTGTCTCC 59.069 43.478 0.00 0.00 37.67 3.71
3076 3116 4.201685 CCACGATAAAAACATCCGTGTCTC 60.202 45.833 0.00 0.00 37.67 3.36
3077 3117 3.682858 CCACGATAAAAACATCCGTGTCT 59.317 43.478 0.00 0.00 37.67 3.41
3078 3118 3.434299 ACCACGATAAAAACATCCGTGTC 59.566 43.478 0.00 0.00 37.67 3.67
3079 3119 3.404899 ACCACGATAAAAACATCCGTGT 58.595 40.909 0.00 0.00 41.28 4.49
3080 3120 4.413495 AACCACGATAAAAACATCCGTG 57.587 40.909 0.00 0.00 33.32 4.94
3081 3121 4.377635 CGAAACCACGATAAAAACATCCGT 60.378 41.667 0.00 0.00 35.09 4.69
3082 3122 4.085884 CGAAACCACGATAAAAACATCCG 58.914 43.478 0.00 0.00 35.09 4.18
3083 3123 5.285798 TCGAAACCACGATAAAAACATCC 57.714 39.130 0.00 0.00 37.37 3.51
3094 3134 2.737359 GCACCATCTATCGAAACCACGA 60.737 50.000 0.00 0.00 46.04 4.35
3095 3135 1.593006 GCACCATCTATCGAAACCACG 59.407 52.381 0.00 0.00 0.00 4.94
3096 3136 2.906354 AGCACCATCTATCGAAACCAC 58.094 47.619 0.00 0.00 0.00 4.16
3097 3137 4.883083 GATAGCACCATCTATCGAAACCA 58.117 43.478 0.00 0.00 36.63 3.67
3104 3144 5.125578 TGGATGTACGATAGCACCATCTATC 59.874 44.000 0.00 0.00 40.78 2.08
3105 3145 5.016831 TGGATGTACGATAGCACCATCTAT 58.983 41.667 0.00 0.00 37.68 1.98
3106 3146 4.217767 GTGGATGTACGATAGCACCATCTA 59.782 45.833 0.00 0.00 37.68 1.98
3107 3147 3.005897 GTGGATGTACGATAGCACCATCT 59.994 47.826 0.00 0.00 37.68 2.90
3108 3148 3.243737 TGTGGATGTACGATAGCACCATC 60.244 47.826 0.00 0.00 42.67 3.51
3109 3149 2.698274 TGTGGATGTACGATAGCACCAT 59.302 45.455 0.00 0.00 42.67 3.55
3110 3150 2.104170 TGTGGATGTACGATAGCACCA 58.896 47.619 0.00 0.00 42.67 4.17
3111 3151 2.882927 TGTGGATGTACGATAGCACC 57.117 50.000 0.00 0.00 42.67 5.01
3112 3152 4.368315 TCAATGTGGATGTACGATAGCAC 58.632 43.478 0.00 0.00 42.67 4.40
3113 3153 4.664150 TCAATGTGGATGTACGATAGCA 57.336 40.909 0.00 0.00 42.67 3.49
3114 3154 4.389992 CCATCAATGTGGATGTACGATAGC 59.610 45.833 0.00 0.00 42.47 2.97
3115 3155 5.783111 TCCATCAATGTGGATGTACGATAG 58.217 41.667 0.00 0.00 43.20 2.08
3116 3156 5.538433 TCTCCATCAATGTGGATGTACGATA 59.462 40.000 5.31 0.00 46.67 2.92
3117 3157 4.344968 TCTCCATCAATGTGGATGTACGAT 59.655 41.667 5.31 0.00 46.67 3.73
3118 3158 3.704061 TCTCCATCAATGTGGATGTACGA 59.296 43.478 5.31 0.00 46.67 3.43
3119 3159 3.804325 GTCTCCATCAATGTGGATGTACG 59.196 47.826 5.31 0.00 46.67 3.67
3120 3160 5.028549 AGTCTCCATCAATGTGGATGTAC 57.971 43.478 5.31 0.00 46.67 2.90
3121 3161 5.189539 TGAAGTCTCCATCAATGTGGATGTA 59.810 40.000 5.31 0.00 46.67 2.29
3122 3162 4.019051 TGAAGTCTCCATCAATGTGGATGT 60.019 41.667 5.31 0.00 46.67 3.06
3123 3163 4.520179 TGAAGTCTCCATCAATGTGGATG 58.480 43.478 5.31 0.00 46.67 3.51
3124 3164 4.849813 TGAAGTCTCCATCAATGTGGAT 57.150 40.909 5.31 0.00 46.67 3.41
3125 3165 4.326826 GTTGAAGTCTCCATCAATGTGGA 58.673 43.478 4.88 4.88 45.78 4.02
3126 3166 3.441572 GGTTGAAGTCTCCATCAATGTGG 59.558 47.826 0.00 0.00 37.82 4.17
3127 3167 3.441572 GGGTTGAAGTCTCCATCAATGTG 59.558 47.826 0.00 0.00 37.82 3.21
3128 3168 3.074390 TGGGTTGAAGTCTCCATCAATGT 59.926 43.478 0.00 0.00 37.82 2.71
3129 3169 3.441572 GTGGGTTGAAGTCTCCATCAATG 59.558 47.826 0.00 0.00 37.82 2.82
3130 3170 3.690460 GTGGGTTGAAGTCTCCATCAAT 58.310 45.455 0.00 0.00 37.82 2.57
3131 3171 2.549992 CGTGGGTTGAAGTCTCCATCAA 60.550 50.000 0.00 0.00 33.37 2.57
3132 3172 1.001974 CGTGGGTTGAAGTCTCCATCA 59.998 52.381 0.00 0.00 0.00 3.07
3133 3173 1.275291 TCGTGGGTTGAAGTCTCCATC 59.725 52.381 0.00 0.00 0.00 3.51
3134 3174 1.348064 TCGTGGGTTGAAGTCTCCAT 58.652 50.000 0.00 0.00 0.00 3.41
3135 3175 1.124780 TTCGTGGGTTGAAGTCTCCA 58.875 50.000 0.00 0.00 0.00 3.86
3136 3176 2.143925 CTTTCGTGGGTTGAAGTCTCC 58.856 52.381 0.00 0.00 0.00 3.71
3137 3177 2.143925 CCTTTCGTGGGTTGAAGTCTC 58.856 52.381 0.00 0.00 0.00 3.36
3138 3178 1.489230 ACCTTTCGTGGGTTGAAGTCT 59.511 47.619 0.00 0.00 32.46 3.24
3139 3179 1.963172 ACCTTTCGTGGGTTGAAGTC 58.037 50.000 0.00 0.00 32.46 3.01
3140 3180 3.208594 GTTACCTTTCGTGGGTTGAAGT 58.791 45.455 0.00 0.00 38.19 3.01
3141 3181 3.207778 TGTTACCTTTCGTGGGTTGAAG 58.792 45.455 0.00 0.00 38.19 3.02
3142 3182 3.207778 CTGTTACCTTTCGTGGGTTGAA 58.792 45.455 0.00 0.00 38.19 2.69
3143 3183 2.171027 ACTGTTACCTTTCGTGGGTTGA 59.829 45.455 0.00 0.00 38.19 3.18
3144 3184 2.567985 ACTGTTACCTTTCGTGGGTTG 58.432 47.619 0.00 0.00 38.19 3.77
3145 3185 2.946990 CAACTGTTACCTTTCGTGGGTT 59.053 45.455 0.00 0.00 38.19 4.11
3146 3186 2.567985 CAACTGTTACCTTTCGTGGGT 58.432 47.619 0.00 0.00 40.53 4.51
3147 3187 1.265905 GCAACTGTTACCTTTCGTGGG 59.734 52.381 0.00 0.00 0.00 4.61
3148 3188 1.070175 CGCAACTGTTACCTTTCGTGG 60.070 52.381 0.00 0.00 0.00 4.94
3149 3189 1.659211 GCGCAACTGTTACCTTTCGTG 60.659 52.381 0.30 0.00 0.00 4.35
3150 3190 0.584876 GCGCAACTGTTACCTTTCGT 59.415 50.000 0.30 0.00 0.00 3.85
3151 3191 0.450482 CGCGCAACTGTTACCTTTCG 60.450 55.000 8.75 0.00 0.00 3.46
3152 3192 0.863144 TCGCGCAACTGTTACCTTTC 59.137 50.000 8.75 0.00 0.00 2.62
3153 3193 0.865769 CTCGCGCAACTGTTACCTTT 59.134 50.000 8.75 0.00 0.00 3.11
3154 3194 0.249741 ACTCGCGCAACTGTTACCTT 60.250 50.000 8.75 0.00 0.00 3.50
3155 3195 0.666577 GACTCGCGCAACTGTTACCT 60.667 55.000 8.75 0.00 0.00 3.08
3156 3196 1.623973 GGACTCGCGCAACTGTTACC 61.624 60.000 8.75 0.00 0.00 2.85
3157 3197 0.942410 TGGACTCGCGCAACTGTTAC 60.942 55.000 8.75 0.00 0.00 2.50
3158 3198 0.942410 GTGGACTCGCGCAACTGTTA 60.942 55.000 8.75 0.00 0.00 2.41
3159 3199 2.108157 TGGACTCGCGCAACTGTT 59.892 55.556 8.75 0.00 0.00 3.16
3160 3200 2.661866 GTGGACTCGCGCAACTGT 60.662 61.111 8.75 0.00 0.00 3.55
3161 3201 3.767230 CGTGGACTCGCGCAACTG 61.767 66.667 8.75 0.00 40.09 3.16
3162 3202 3.493830 TTCGTGGACTCGCGCAACT 62.494 57.895 8.75 0.00 45.48 3.16
3163 3203 3.000080 CTTCGTGGACTCGCGCAAC 62.000 63.158 8.75 0.00 45.48 4.17
3164 3204 2.733218 CTTCGTGGACTCGCGCAA 60.733 61.111 8.75 0.00 45.48 4.85
3165 3205 4.717629 CCTTCGTGGACTCGCGCA 62.718 66.667 8.75 0.00 45.48 6.09
3168 3208 3.991536 GAGCCCTTCGTGGACTCGC 62.992 68.421 0.00 0.00 38.35 5.03
3169 3209 2.182030 GAGCCCTTCGTGGACTCG 59.818 66.667 0.00 0.00 38.35 4.18
3170 3210 2.283529 TGGAGCCCTTCGTGGACTC 61.284 63.158 5.35 5.35 38.35 3.36
3171 3211 2.203788 TGGAGCCCTTCGTGGACT 60.204 61.111 0.00 0.00 38.35 3.85
3172 3212 2.047179 GTGGAGCCCTTCGTGGAC 60.047 66.667 0.00 0.00 38.35 4.02
3173 3213 3.319198 GGTGGAGCCCTTCGTGGA 61.319 66.667 0.00 0.00 38.35 4.02
3190 3230 1.374252 CTTCGTGGACCCTTCGTGG 60.374 63.158 0.00 0.00 0.00 4.94
3191 3231 0.032952 TTCTTCGTGGACCCTTCGTG 59.967 55.000 0.00 0.00 0.00 4.35
3192 3232 0.317479 CTTCTTCGTGGACCCTTCGT 59.683 55.000 0.00 0.00 0.00 3.85
3193 3233 1.014564 GCTTCTTCGTGGACCCTTCG 61.015 60.000 0.00 0.00 0.00 3.79
3194 3234 0.034896 TGCTTCTTCGTGGACCCTTC 59.965 55.000 0.00 0.00 0.00 3.46
3195 3235 0.472471 TTGCTTCTTCGTGGACCCTT 59.528 50.000 0.00 0.00 0.00 3.95
3196 3236 0.250338 GTTGCTTCTTCGTGGACCCT 60.250 55.000 0.00 0.00 0.00 4.34
3197 3237 1.235281 GGTTGCTTCTTCGTGGACCC 61.235 60.000 0.00 0.00 0.00 4.46
3198 3238 0.250338 AGGTTGCTTCTTCGTGGACC 60.250 55.000 0.00 0.00 0.00 4.46
3199 3239 1.264288 CAAGGTTGCTTCTTCGTGGAC 59.736 52.381 0.00 0.00 0.00 4.02
3200 3240 1.134220 ACAAGGTTGCTTCTTCGTGGA 60.134 47.619 0.00 0.00 0.00 4.02
3201 3241 1.264288 GACAAGGTTGCTTCTTCGTGG 59.736 52.381 0.00 0.00 0.00 4.94
3202 3242 2.213499 AGACAAGGTTGCTTCTTCGTG 58.787 47.619 0.00 0.00 0.00 4.35
3203 3243 2.622064 AGACAAGGTTGCTTCTTCGT 57.378 45.000 0.00 0.00 0.00 3.85
3204 3244 3.619038 GGATAGACAAGGTTGCTTCTTCG 59.381 47.826 0.00 0.00 0.00 3.79
3205 3245 3.942115 GGGATAGACAAGGTTGCTTCTTC 59.058 47.826 0.00 0.00 0.00 2.87
3206 3246 3.330701 TGGGATAGACAAGGTTGCTTCTT 59.669 43.478 0.00 0.00 0.00 2.52
3207 3247 2.912956 TGGGATAGACAAGGTTGCTTCT 59.087 45.455 0.00 0.00 0.00 2.85
3208 3248 3.010420 GTGGGATAGACAAGGTTGCTTC 58.990 50.000 0.00 0.00 0.00 3.86
3209 3249 2.290960 GGTGGGATAGACAAGGTTGCTT 60.291 50.000 0.00 0.00 0.00 3.91
3210 3250 1.282157 GGTGGGATAGACAAGGTTGCT 59.718 52.381 0.00 0.00 0.00 3.91
3211 3251 1.004277 TGGTGGGATAGACAAGGTTGC 59.996 52.381 0.00 0.00 0.00 4.17
3212 3252 3.282021 CATGGTGGGATAGACAAGGTTG 58.718 50.000 0.00 0.00 0.00 3.77
3213 3253 2.242196 CCATGGTGGGATAGACAAGGTT 59.758 50.000 2.57 0.00 32.67 3.50
3214 3254 1.846439 CCATGGTGGGATAGACAAGGT 59.154 52.381 2.57 0.00 32.67 3.50
3215 3255 1.477558 GCCATGGTGGGATAGACAAGG 60.478 57.143 14.67 0.00 38.19 3.61
3216 3256 1.492176 AGCCATGGTGGGATAGACAAG 59.508 52.381 14.67 0.00 38.19 3.16
3217 3257 1.212688 CAGCCATGGTGGGATAGACAA 59.787 52.381 14.67 0.00 38.19 3.18
3218 3258 0.839277 CAGCCATGGTGGGATAGACA 59.161 55.000 14.67 0.00 38.19 3.41
3219 3259 0.839946 ACAGCCATGGTGGGATAGAC 59.160 55.000 14.67 0.00 38.19 2.59
3220 3260 1.131638 GACAGCCATGGTGGGATAGA 58.868 55.000 14.67 0.00 38.19 1.98
3221 3261 0.250038 CGACAGCCATGGTGGGATAG 60.250 60.000 14.67 0.00 38.19 2.08
3222 3262 1.829456 CGACAGCCATGGTGGGATA 59.171 57.895 14.67 0.00 38.19 2.59
3223 3263 2.591753 CGACAGCCATGGTGGGAT 59.408 61.111 14.67 0.00 38.19 3.85
3224 3264 4.408821 GCGACAGCCATGGTGGGA 62.409 66.667 14.67 0.00 38.19 4.37


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.